Search of human proteins with 239757446

Search of human proteins with 239757446

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757446 PREDICTED: similar to mCG146261 [Homo sapiens]
         (319 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757446 PREDICTED: similar to mCG146261 [Homo sapiens]           648   0.0  
gi|239751965 PREDICTED: similar to mCG146261 [Homo sapiens]           648   0.0  
gi|239746447 PREDICTED: hypothetical protein XP_002344225 [Homo ...   648   0.0  
gi|12056463 coagulation factor VIII-associated protein [Homo sap...    40   0.003
gi|56090586 coagulation factor VIII-associated (intronic transcr...    40   0.003
gi|56090588 coagulation factor VIII-associated (intronic transcr...    40   0.003
gi|62945417 dystrophia myotonica-containing WD repeat motif prot...    38   0.010
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]    37   0.023
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]     37   0.023
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]     37   0.023
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]    37   0.023
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]        36   0.040
gi|239755172 PREDICTED: hypothetical protein [Homo sapiens]            36   0.052
gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo ...    36   0.052
gi|239743940 PREDICTED: hypothetical protein XP_002342994 [Homo ...    36   0.052
gi|59806361 hypothetical protein LOC387104 [Homo sapiens]              35   0.088
gi|31543535 R3H domain containing 1 [Homo sapiens]                     35   0.12 
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    34   0.20 
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       34   0.20 
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    34   0.20 
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    34   0.20 
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    34   0.20 
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    34   0.20 
gi|223029432 solute carrier family 2 (facilitated glucose transp...    34   0.20 
gi|223029430 solute carrier family 2 (facilitated glucose transp...    34   0.20 
gi|50428940 mediator complex subunit 25 [Homo sapiens]                 33   0.34 
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]        33   0.34 
gi|139394604 bromo adjacent homology domain containing 1 [Homo s...    33   0.34 
gi|5174633 receptor for egg jelly-like protein precursor [Homo s...    33   0.34 
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]    33   0.34 

>gi|239757446 PREDICTED: similar to mCG146261 [Homo sapiens]
          Length = 319

 Score =  648 bits (1672), Expect = 0.0
 Identities = 319/319 (100%), Positives = 319/319 (100%)

Query: 1   MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV 60
           MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV
Sbjct: 1   MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV 60

Query: 61  PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP 120
           PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP
Sbjct: 61  PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP 120

Query: 121 LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP 180
           LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP
Sbjct: 121 LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP 180

Query: 181 HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG 240
           HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG
Sbjct: 181 HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG 240

Query: 241 LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV 300
           LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV
Sbjct: 241 LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV 300

Query: 301 LFLRTFGHRALLIVGVRQV 319
           LFLRTFGHRALLIVGVRQV
Sbjct: 301 LFLRTFGHRALLIVGVRQV 319


>gi|239751965 PREDICTED: similar to mCG146261 [Homo sapiens]
          Length = 319

 Score =  648 bits (1672), Expect = 0.0
 Identities = 319/319 (100%), Positives = 319/319 (100%)

Query: 1   MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV 60
           MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV
Sbjct: 1   MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV 60

Query: 61  PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP 120
           PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP
Sbjct: 61  PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP 120

Query: 121 LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP 180
           LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP
Sbjct: 121 LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP 180

Query: 181 HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG 240
           HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG
Sbjct: 181 HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG 240

Query: 241 LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV 300
           LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV
Sbjct: 241 LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV 300

Query: 301 LFLRTFGHRALLIVGVRQV 319
           LFLRTFGHRALLIVGVRQV
Sbjct: 301 LFLRTFGHRALLIVGVRQV 319


>gi|239746447 PREDICTED: hypothetical protein XP_002344225 [Homo
           sapiens]
          Length = 319

 Score =  648 bits (1672), Expect = 0.0
 Identities = 319/319 (100%), Positives = 319/319 (100%)

Query: 1   MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV 60
           MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV
Sbjct: 1   MGRAGWGVCCRVLGGAGRAVLGVVLHVLQRLRAVGRKGNARLEGGGCQVLGFERVTWFAV 60

Query: 61  PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP 120
           PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP
Sbjct: 61  PDQDGHGHPARRGQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVP 120

Query: 121 LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP 180
           LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP
Sbjct: 121 LLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPP 180

Query: 181 HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG 240
           HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG
Sbjct: 181 HPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHG 240

Query: 241 LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV 300
           LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV
Sbjct: 241 LGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGPLGWLGPLV 300

Query: 301 LFLRTFGHRALLIVGVRQV 319
           LFLRTFGHRALLIVGVRQV
Sbjct: 301 LFLRTFGHRALLIVGVRQV 319


>gi|12056463 coagulation factor VIII-associated protein [Homo
           sapiens]
          Length = 371

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 11/131 (8%)

Query: 73  GQGRHLHTFLG-PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVG 131
           G    LH  LG P A   + + L   L   G+ A  AG      + Q+P LP A LQ +G
Sbjct: 126 GAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALG 185

Query: 132 LRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSL 191
                + +   LLA     A  +   ++ L    G      +P    PP PPP P  G  
Sbjct: 186 -----EAASCQLLARDYTGALAVFTRMQRLAREHGS-----HPVQSLPPPPPPAPQPGPG 235

Query: 192 ATSRAPGQSLP 202
           AT   P   LP
Sbjct: 236 ATPALPAALLP 246


>gi|56090586 coagulation factor VIII-associated (intronic
           transcript) 3 [Homo sapiens]
          Length = 371

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 11/131 (8%)

Query: 73  GQGRHLHTFLG-PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVG 131
           G    LH  LG P A   + + L   L   G+ A  AG      + Q+P LP A LQ +G
Sbjct: 126 GAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALG 185

Query: 132 LRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSL 191
                + +   LLA     A  +   ++ L    G      +P    PP PPP P  G  
Sbjct: 186 -----EAASCQLLARDYTGALAVFTRMQRLAREHGS-----HPVQSLPPPPPPAPQPGPG 235

Query: 192 ATSRAPGQSLP 202
           AT   P   LP
Sbjct: 236 ATPALPAALLP 246


>gi|56090588 coagulation factor VIII-associated (intronic
           transcript) 2 [Homo sapiens]
          Length = 371

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 11/131 (8%)

Query: 73  GQGRHLHTFLG-PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVG 131
           G    LH  LG P A   + + L   L   G+ A  AG      + Q+P LP A LQ +G
Sbjct: 126 GAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALG 185

Query: 132 LRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSL 191
                + +   LLA     A  +   ++ L    G      +P    PP PPP P  G  
Sbjct: 186 -----EAASCQLLARDYTGALAVFTRMQRLAREHGS-----HPVQSLPPPPPPAPQPGPG 235

Query: 192 ATSRAPGQSLP 202
           AT   P   LP
Sbjct: 236 ATPALPAALLP 246


>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
           [Homo sapiens]
          Length = 674

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 164 RAGGRVSYLYPGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIY-- 221
           R  G  S   P  P+PP PPP P   S   +  P  S P AG       P+VR+ ++   
Sbjct: 43  RRSGPASAQTPVPPQPPQPPPGPASASGPGAAGPASSPPPAGPGPGPALPAVRLSLVRLG 102

Query: 222 --QPLGASNP---GCGCRNGGDH---GLGSQVLLLTG 250
                GA  P     G  +GGD     LG ++    G
Sbjct: 103 EPDSAGAGEPPATPAGLGSGGDRVCFNLGRELYFYPG 139


>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 174 PGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLR-LEPSVRVDIIYQPLGASNPGCG 232
           P  P PP PPP P + ++    +P     + G  GL  L P     ++   L +     G
Sbjct: 652 PPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLG 711

Query: 233 CRNGGDHGLGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGP 292
            R G    + + +  L+G       G    +    A++  + Q  ++  V   L     P
Sbjct: 712 ARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQP 771

Query: 293 LGWLGPLVLFLRTFGHRALL 312
           L  L P    LR+F H+  L
Sbjct: 772 LQRLQPQ---LRSFFHQHYL 788


>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 174 PGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLR-LEPSVRVDIIYQPLGASNPGCG 232
           P  P PP PPP P + ++    +P     + G  GL  L P     ++   L +     G
Sbjct: 652 PPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLG 711

Query: 233 CRNGGDHGLGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGP 292
            R G    + + +  L+G       G    +    A++  + Q  ++  V   L     P
Sbjct: 712 ARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQP 771

Query: 293 LGWLGPLVLFLRTFGHRALL 312
           L  L P    LR+F H+  L
Sbjct: 772 LQRLQPQ---LRSFFHQHYL 788


>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 174 PGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLR-LEPSVRVDIIYQPLGASNPGCG 232
           P  P PP PPP P + ++    +P     + G  GL  L P     ++   L +     G
Sbjct: 652 PPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLG 711

Query: 233 CRNGGDHGLGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGP 292
            R G    + + +  L+G       G    +    A++  + Q  ++  V   L     P
Sbjct: 712 ARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQP 771

Query: 293 LGWLGPLVLFLRTFGHRALL 312
           L  L P    LR+F H+  L
Sbjct: 772 LQRLQPQ---LRSFFHQHYL 788


>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
          Length = 1132

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 174 PGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLR-LEPSVRVDIIYQPLGASNPGCG 232
           P  P PP PPP P + ++    +P     + G  GL  L P     ++   L +     G
Sbjct: 658 PPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLG 717

Query: 233 CRNGGDHGLGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGP 292
            R G    + + +  L+G       G    +    A++  + Q  ++  V   L     P
Sbjct: 718 ARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQP 777

Query: 293 LGWLGPLVLFLRTFGHRALL 312
           L  L P    LR+F H+  L
Sbjct: 778 LQRLQPQ---LRSFFHQHYL 794


>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
          Length = 358

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 39/137 (28%), Positives = 51/137 (37%), Gaps = 21/137 (15%)

Query: 73  GQGRHLHTFLGPGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVGL 132
           G+   L+  +G  AL  + +  EP      RE DEA Q+   G    P  P  P      
Sbjct: 141 GRLEPLYERVGAPALRPLVIKQEP------REEDEAKQLALAGL--FPYQPPPP------ 186

Query: 133 RLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSLA 192
                  P S     PP A      ++      G    +L PGHP PP P PVP      
Sbjct: 187 ------PPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPP-PTPVPSPHPAP 239

Query: 193 TSRAPGQSLPAAGVRGL 209
              A G   P + ++GL
Sbjct: 240 ALGAAGLPGPGSALKGL 256



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 25/126 (19%)

Query: 115 GRRQVPLLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDR---------- 164
           G  Q P  P AP  L G+   E  + + + A + PAA     +  +              
Sbjct: 38  GPAQPPAPPAAPEPLGGIC--EHETSIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAV 95

Query: 165 ----AGGRVSYLYPGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDII 220
                GG   + YPG P  P    +PG    A    PG    AAG    RLEP      +
Sbjct: 96  GPTGGGGGGDFDYPGAPAGPGGAVMPGG---AHGPPPGYGCAAAGYLDGRLEP------L 146

Query: 221 YQPLGA 226
           Y+ +GA
Sbjct: 147 YERVGA 152


>gi|239755172 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 177 PKPPHPPPVPGRGSLATSRAPGQSLPAAGVR---GLRLEPSVRVDIIYQPLGAS 227
           P PP PPPVPG  + ++S  PG S P+   R    LR    +R D  +   G+S
Sbjct: 142 PPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSS 195


>gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo
           sapiens]
          Length = 295

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 177 PKPPHPPPVPGRGSLATSRAPGQSLPAAGVR---GLRLEPSVRVDIIYQPLGAS 227
           P PP PPPVPG  + ++S  PG S P+   R    LR    +R D  +   G+S
Sbjct: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSS 225


>gi|239743940 PREDICTED: hypothetical protein XP_002342994 [Homo
           sapiens]
          Length = 295

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 177 PKPPHPPPVPGRGSLATSRAPGQSLPAAGVR---GLRLEPSVRVDIIYQPLGAS 227
           P PP PPPVPG  + ++S  PG S P+   R    LR    +R D  +   G+S
Sbjct: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSS 225


>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
          Length = 947

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 49/162 (30%), Positives = 58/162 (35%), Gaps = 30/162 (18%)

Query: 84  PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQV--PLLPKAPLQLVGLRLGEKHSPL 141
           PGA+  VA          G EA  A  + ALG R+   P  P   L+ V  +LGE   PL
Sbjct: 115 PGAVQPVA----------GAEAAPAATLAALGGRRPGPPEEPPRELESVPSKLGEP-PPL 163

Query: 142 SLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSLATSRAPGQSL 201
               G      G           AGG       G P+PP P    G+G  A  R      
Sbjct: 164 GEGGGGGGEGGG-----------AGGGSGEREGGAPQPPPPRGWRGKGVRAQQRG----- 207

Query: 202 PAAGVRGLRLEPSVRVDIIYQPLGASNPGCGCRNGGDHGLGS 243
             +G  G    PS          G+ N G G   GG  G GS
Sbjct: 208 -GSGGEGASPSPSSSSAGKTPGTGSRNSGSGVAGGGSGGGGS 248


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 39/144 (27%), Positives = 52/144 (36%), Gaps = 25/144 (17%)

Query: 116 RRQVPLLPKAPLQLVGLR-----------LGEKHSPLSLL------AGVPPAARGLLVIV 158
           R QVP  P+ PL     +           LG + S +SL          P AA     +V
Sbjct: 515 RSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVV 574

Query: 159 RVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLR---LEPSV 215
                ++G  ++   P HP PP PPP P          PGQ +P AG         +P +
Sbjct: 575 LQSPQQSGYIMTAAPPPHPPPPPPPPPP-----PPPLPPGQPVPTAGYPASGHPVSQPVL 629

Query: 216 RVDIIYQPLGASNPGCGCRNGGDH 239
           +     Q      P C C  G  H
Sbjct: 630 QQQGYIQQPSPQMPACYCAPGHYH 653


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 174 PGHPKPPHPPPVPGRGSLATSRAPGQS----LPAAGVRGLRLEPSVRVDIIYQPLGASNP 229
           P    P  PPP    G+ A+ RAP  S    LPAA + G  L P+ R+    +PL AS P
Sbjct: 767 PAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPAL-PARRLSRASRPLSASQP 825


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 174 PGHPKPPHPPP---VPGRGSLATSRAPGQSLPAAGVRGLRL 211
           P  P PP P P   +P  G  A +  PG    AAG RG RL
Sbjct: 102 PSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 142


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 174 PGHPKPPHPPP---VPGRGSLATSRAPGQSLPAAGVRGLRL 211
           P  P PP P P   +P  G  A +  PG    AAG RG RL
Sbjct: 85  PSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 125


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 174 PGHPKPPHPPP---VPGRGSLATSRAPGQSLPAAGVRGLRL 211
           P  P PP P P   +P  G  A +  PG    AAG RG RL
Sbjct: 93  PSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 133


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 174 PGHPKPPHPPP---VPGRGSLATSRAPGQSLPAAGVRGLRL 211
           P  P PP P P   +P  G  A +  PG    AAG RG RL
Sbjct: 85  PSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 125


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 174 PGHPKPPHPPP---VPGRGSLATSRAPGQSLPAAGVRGLRL 211
           P  P PP P P   +P  G  A +  PG    AAG RG RL
Sbjct: 93  PSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 133


>gi|223029432 solute carrier family 2 (facilitated glucose
           transporter), member 6 isoform 1 [Homo sapiens]
          Length = 507

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 94  LEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVGLRLGEKHSPLSLLAG--VPPAA 151
           L+PDL L   +A   G VF LG     L       L+G +L    S +   AG  +   A
Sbjct: 70  LDPDLHLTKSQASWFGSVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGA 129

Query: 152 RGL--LVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPG 187
            GL  L++ R L   AGG  +   P +     PP V G
Sbjct: 130 HGLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRG 167


>gi|223029430 solute carrier family 2 (facilitated glucose
           transporter), member 6 isoform 2 [Homo sapiens]
          Length = 445

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 94  LEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVGLRLGEKHSPLSLLAG--VPPAA 151
           L+PDL L   +A   G VF LG     L       L+G +L    S +   AG  +   A
Sbjct: 70  LDPDLHLTKSQASWFGSVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGA 129

Query: 152 RGL--LVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPG 187
            GL  L++ R L   AGG  +   P +     PP V G
Sbjct: 130 HGLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRG 167


>gi|50428940 mediator complex subunit 25 [Homo sapiens]
          Length = 747

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 172 LYPGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGC 231
           L PG P  P PPP   + SL ++ APG  L      G    PS+   +   P G S P  
Sbjct: 328 LPPGPPGAPKPPPA-SQPSLVSTVAPGSGLAPTAQPG---APSMAGTV--APGGVSGPSP 381

Query: 232 GCRN----GGDHGLGSQVLLLTGVLKALGAGQPARV 263
                   GG   + +++L  +GVL+     +PA V
Sbjct: 382 AQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASV 417


>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
          Length = 1604

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 174  PGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRGLRLEPSVRVDIIYQPLGASNPGCGC 233
            PGH  PP PP  PG   ++     G    A G RGL   P        QP    +PG   
Sbjct: 1290 PGHVGPPGPPGQPGPAGISAVGLKGDR-GATGERGLAGLPG-------QPGPPGHPGPPG 1341

Query: 234  RNGGDHGLGSQVLLLTGVLKALG-AGQPARVRVVAAVVEGVLQGQALHRVQGALPQRPGP 292
              G D   G +     G     G  G P       A  +   +GQA  + +  +P  PG 
Sbjct: 1342 EPGTDGAAGKE-----GPPGKQGFYGPPGPKGDPGAAGQ---KGQAGEKGRAGMPGGPGK 1393

Query: 293  LGWLGPL 299
             G +GP+
Sbjct: 1394 SGSMGPV 1400



 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 174 PGHPKPPHPPPVPG-RGSLATSRAPGQSLPAAGVRGLRLE 212
           PG P PP PP VPG +G    +  PGQ    A +  L +E
Sbjct: 909 PGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIE 948



 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 174  PGHPKPPHPPPVPGRGSLATSRAPGQSLPAAGVRG 208
            PG P PP PP  PG+        P     + G+RG
Sbjct: 1158 PGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRG 1192


>gi|139394604 bromo adjacent homology domain containing 1 [Homo
           sapiens]
          Length = 780

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 8/98 (8%)

Query: 120 PLLPKAPLQLVGLRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGR----VSYLYPG 175
           P +P++P  L G R   K+ PL     VP   +   V++  L + AG R       L P 
Sbjct: 39  PGMPESPGHLTGRR---KNYPLRKRPLVPEKPKACKVLLTRLENVAGPRSADEADELPPD 95

Query: 176 HPKPPHPPPVPGRGSLATSRAPG-QSLPAAGVRGLRLE 212
            PKPP P P      LA  R     SL A  +  L LE
Sbjct: 96  LPKPPSPAPSSEDPGLAQPRKRRLASLNAEALNNLLLE 133


>gi|5174633 receptor for egg jelly-like protein precursor [Homo
           sapiens]
          Length = 2253

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 38/119 (31%), Positives = 48/119 (40%), Gaps = 7/119 (5%)

Query: 183 PPVPGRGSLATSRAPG---QSLPAAGVRGLRLEPSVRVDIIYQPLGA--SNPGCGCRNGG 237
           PPVP     A S APG   +  P  GVRG R   S+R   + +  GA  S  G  C   G
Sbjct: 24  PPVPRGAQAAVSGAPGGLLRGAPGLGVRGGRALLSLRPSAV-RAGGAVLSGRGSLCFPHG 82

Query: 238 DHGLGSQVLLLTGVLKALGAGQPARVRVVAAVVEGVLQGQALHRVQGA-LPQRPGPLGW 295
             G     L L  +L A     PA   +    ++   +G  L       LP+ PG L W
Sbjct: 83  GTGRRWYCLDLRVLLSAQRLPWPAAPALALVDLQLSARGGRLSLTWSVRLPRSPGRLAW 141


>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
          Length = 170

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 19/92 (20%)

Query: 139 SPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSLATSRAPG 198
           +P  LLA +P  A  L +++  L  R G   S      P+P   PP P   + AT  AP 
Sbjct: 3   APAELLAALPALATALALLLAWLLVRRGAAAS------PEPARAPPEPAPPAEATG-APA 55

Query: 199 QSLPAAGVRGLRLEPSVRVDIIYQPLGASNPG 230
            S P A       EP+        P G   PG
Sbjct: 56  PSRPCAP------EPAA------SPAGPEEPG 75


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.145    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,441,961
Number of Sequences: 37866
Number of extensions: 912088
Number of successful extensions: 6409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 5864
Number of HSP's gapped (non-prelim): 685
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.