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Search of human proteins with 239757343
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo
sapiens]
(521 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo ... 1075 0.0
gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo ... 941 0.0
gi|239746361 PREDICTED: hypothetical protein XP_002343736 [Homo ... 937 0.0
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ... 41 0.002
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 37 0.034
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 37 0.044
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 37 0.044
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 37 0.044
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 37 0.057
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 37 0.057
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 37 0.057
gi|161019170 mucin 5AC [Homo sapiens] 36 0.098
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 36 0.098
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap... 36 0.098
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap... 36 0.098
gi|7662010 zinc finger protein 516 [Homo sapiens] 35 0.13
gi|7656971 phosphonoformate immuno-associated protein 5 isoform ... 35 0.13
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa... 35 0.17
gi|8400715 microtubule-associated protein tau isoform 4 [Homo sa... 35 0.17
gi|8400711 microtubule-associated protein tau isoform 3 [Homo sa... 35 0.17
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 35 0.17
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ... 35 0.17
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 35 0.17
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.17
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 35 0.22
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 34 0.37
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s... 34 0.37
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 34 0.37
gi|30039694 zinc finger protein 598 [Homo sapiens] 34 0.37
gi|56549694 enabled homolog isoform a [Homo sapiens] 33 0.48
>gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo
sapiens]
Length = 521
Score = 1075 bits (2779), Expect = 0.0
Identities = 521/521 (100%), Positives = 521/521 (100%)
Query: 1 MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL
Sbjct: 1 MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
Query: 61 QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA
Sbjct: 61 QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
Query: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL
Sbjct: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
Query: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP
Sbjct: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
Query: 241 HTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
HTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ
Sbjct: 241 HTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
Query: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH
Sbjct: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
Query: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD
Sbjct: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
Query: 421 KWPSAPECYRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLHDVTVVDVAGHSV 480
KWPSAPECYRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLHDVTVVDVAGHSV
Sbjct: 421 KWPSAPECYRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLHDVTVVDVAGHSV 480
Query: 481 SRPPLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 521
SRPPLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS
Sbjct: 481 SRPPLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 521
>gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo
sapiens]
Length = 508
Score = 941 bits (2432), Expect = 0.0
Identities = 474/521 (90%), Positives = 480/521 (92%), Gaps = 13/521 (2%)
Query: 1 MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL
Sbjct: 1 MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
Query: 61 QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA
Sbjct: 61 QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
Query: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL
Sbjct: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
Query: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP
Sbjct: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
Query: 241 HTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
HTRGM GSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ
Sbjct: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
Query: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH
Sbjct: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
Query: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD
Sbjct: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
Query: 421 KWPSAPECYRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLHDVTVVDVAGHSV 480
KWPSAPECYRQLGQM G+ E ++ +WA L + +
Sbjct: 421 KWPSAPECYRQLGQMP-----VWGSTEVDEKPD--SVLRWAPSSMMLQAGIL-----ERL 468
Query: 481 SRPPLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 521
RPP PGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS
Sbjct: 469 VRPPATPA-PGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 508
>gi|239746361 PREDICTED: hypothetical protein XP_002343736 [Homo
sapiens]
Length = 508
Score = 937 bits (2423), Expect = 0.0
Identities = 473/521 (90%), Positives = 479/521 (91%), Gaps = 13/521 (2%)
Query: 1 MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL
Sbjct: 1 MMKTCSSPYWAVISVLGEARPDSSKASSLGSPSNGASGRAGSPCQNPILALQKDWTSVSL 60
Query: 61 QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA
Sbjct: 61 QWEATLDTRSHSGGHKATLLALDLEELSHAGEILLVGLSHLLLCRLWVHNLQALGSGVKA 120
Query: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL
Sbjct: 121 TLEAVPEERSRMVDFPPYTTLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLL 180
Query: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGP 240
VGVLLDLGGRGGALQFSDQALPSSHRGTPSTS KPSGHQPAGPTGTCSGTHSARLRPGGP
Sbjct: 181 VGVLLDLGGRGGALQFSDQALPSSHRGTPSTSRKPSGHQPAGPTGTCSGTHSARLRPGGP 240
Query: 241 HTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
HTRGM GSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ
Sbjct: 241 HTRGMPGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQ 300
Query: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH
Sbjct: 301 AAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPH 360
Query: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD
Sbjct: 361 LPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPAD 420
Query: 421 KWPSAPECYRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLHDVTVVDVAGHSV 480
KWPSAPECYRQLGQM G+ E ++ +WA L + +
Sbjct: 421 KWPSAPECYRQLGQMP-----VWGSTEVDEKPD--SVLRWAPSSMMLQAGIL-----ERL 468
Query: 481 SRPPLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 521
RPP PGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS
Sbjct: 469 VRPPATPA-PGDSPMILAAVDAPIMMDRLGAMKDIRDSTYS 508
>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 468
Score = 41.2 bits (95), Expect = 0.002
Identities = 50/166 (30%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 205 HRGTPSTSPKPSGHQPAGPTGTCSGTHS--ARLRPGGPHTR-GMLGSLRGARSQHCSLIR 261
H G +P +G TG C S A G TR G +R ++ SL+R
Sbjct: 243 HPGQAGRAPTKAGSLCNAATGECHPDPSWVAFAHIGAWGTRCGGGKEFSSSRKRYSSLLR 302
Query: 262 -----LACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCR 316
A S SP F+ + + S HP A A S A AT R
Sbjct: 303 GASREAASSNASSSPGTPFLGKVVPAAETP----GSPGAHPAAGRRAVQTSAPAPGATGR 358
Query: 317 I--CARSHPSVRSPPG--EGEGEVLQLLADTPGPEEKTPGRPSPFP 358
C S P++R P G GE E+ +LL TP + PG P P P
Sbjct: 359 APGCLASAPAMRRPLGAQAGEVELPRLLVPTP---PRRPGDPGPSP 401
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 37.4 bits (85), Expect = 0.034
Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 295 VHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTP-GR 353
++PG A A+ A+ AAA A SV SPP E G A T P E P G
Sbjct: 388 LYPGIPAPAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAA----AATLLPHEVAPLGA 443
Query: 354 PSPFPP----HLPFCALVETVHTGCQCALGGHQPGRFPP 388
P P P HLPF E + QPG+ P
Sbjct: 444 PHPQHPHGRTHLPFAGPREPGNPESSAQEDPSQPGKEAP 482
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 37.0 bits (84), Expect = 0.044
Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 10/154 (6%)
Query: 281 GTGPLTCGRLASSAVHPGAQAAASPA-SQAAAPATCRICARSHPSVRSPPGEGEGEVLQL 339
G P CG +++ P SP A AP T R H GE E E
Sbjct: 59 GPSPYQCGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSG 118
Query: 340 LADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGGHQ----PGRF--PPQILEQ 393
+ P P PG P+ P C+L V G + L G + G+ P+ L
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSL--DVLRGVRLELAGARRRLSEGKLVSRPRALLH 176
Query: 394 RKTGVESVSYFTGRGDEGRAQSHV-PADKWPSAP 426
G ++S R+ S PA + P+AP
Sbjct: 177 GLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAP 210
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 37.0 bits (84), Expect = 0.044
Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 10/154 (6%)
Query: 281 GTGPLTCGRLASSAVHPGAQAAASPA-SQAAAPATCRICARSHPSVRSPPGEGEGEVLQL 339
G P CG +++ P SP A AP T R H GE E E
Sbjct: 59 GPSPYQCGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSG 118
Query: 340 LADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGGHQ----PGRF--PPQILEQ 393
+ P P PG P+ P C+L V G + L G + G+ P+ L
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSL--DVLRGVRLELAGARRRLSEGKLVSRPRALLH 176
Query: 394 RKTGVESVSYFTGRGDEGRAQSHV-PADKWPSAP 426
G ++S R+ S PA + P+AP
Sbjct: 177 GLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAP 210
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 37.0 bits (84), Expect = 0.044
Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 10/154 (6%)
Query: 281 GTGPLTCGRLASSAVHPGAQAAASPA-SQAAAPATCRICARSHPSVRSPPGEGEGEVLQL 339
G P CG +++ P SP A AP T R H GE E E
Sbjct: 59 GPSPYQCGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASSG 118
Query: 340 LADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGGHQ----PGRF--PPQILEQ 393
+ P P PG P+ P C+L V G + L G + G+ P+ L
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSL--DVLRGVRLELAGARRRLSEGKLVSRPRALLH 176
Query: 394 RKTGVESVSYFTGRGDEGRAQSHV-PADKWPSAP 426
G ++S R+ S PA + P+AP
Sbjct: 177 GLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAP 210
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 36.6 bits (83), Expect = 0.057
Identities = 63/280 (22%), Positives = 83/280 (29%), Gaps = 31/280 (11%)
Query: 206 RGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
RG P +P P + + G R P G G G + + R
Sbjct: 61 RGDPGVAPSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKM 120
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAA---ASPASQAAAPATCRICARSH 322
+ S R R PL R A PG + A + S + P R+ R
Sbjct: 121 GLPDSARRPRAPR----TPLRPERPAPGV--PGGRVAPCTCTSGSPSPRPRRLRVSGRGS 174
Query: 323 PSVRSPPGEGEGEVLQLLADTPGPEEKTPG-------------RPSPFPPHLPFCALVET 369
P+ P QLL P +PG R + P ALV
Sbjct: 175 PAQLPP-------TYQLLGYHRAPPRASPGGWNTETLNTEDARRRARSATQAPPLALVPA 227
Query: 370 VHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPADKWPSAPEC- 428
L GR ++L +S RG GR + D P P
Sbjct: 228 RSRARPAHLRVRAAGRSRHRVLLALSRESRHLSGARERGRAGRYSTRRNLDSLPRKPSTG 287
Query: 429 YRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLH 468
+ L + V CLGT A G + RWQ H
Sbjct: 288 FAALSRRVNQAISCLGTESALEKAEGPTLVT-QERWQDFH 326
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 36.6 bits (83), Expect = 0.057
Identities = 63/280 (22%), Positives = 83/280 (29%), Gaps = 31/280 (11%)
Query: 206 RGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
RG P +P P + + G R P G G G + + R
Sbjct: 61 RGDPGVAPSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKM 120
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAA---ASPASQAAAPATCRICARSH 322
+ S R R PL R A PG + A + S + P R+ R
Sbjct: 121 GLPDSARRPRAPR----TPLRPERPAPGV--PGGRVAPCTCTSGSPSPRPRRLRVSGRGS 174
Query: 323 PSVRSPPGEGEGEVLQLLADTPGPEEKTPG-------------RPSPFPPHLPFCALVET 369
P+ P QLL P +PG R + P ALV
Sbjct: 175 PAQLPP-------TYQLLGYHRAPPRASPGGWNTETLNTEDARRRARSATQAPPLALVPA 227
Query: 370 VHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPADKWPSAPEC- 428
L GR ++L +S RG GR + D P P
Sbjct: 228 RSRARPAHLRVRAAGRSRHRVLLALSRESRHLSGARERGRAGRYSTRRNLDSLPRKPSTG 287
Query: 429 YRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLH 468
+ L + V CLGT A G + RWQ H
Sbjct: 288 FAALSRRVNQAISCLGTESALEKAEGPTLVT-QERWQDFH 326
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 36.6 bits (83), Expect = 0.057
Identities = 63/280 (22%), Positives = 83/280 (29%), Gaps = 31/280 (11%)
Query: 206 RGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
RG P +P P + + G R P G G G + + R
Sbjct: 61 RGDPGVAPSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKM 120
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAA---ASPASQAAAPATCRICARSH 322
+ S R R PL R A PG + A + S + P R+ R
Sbjct: 121 GLPDSARRPRAPR----TPLRPERPAPGV--PGGRVAPCTCTSGSPSPRPRRLRVSGRGS 174
Query: 323 PSVRSPPGEGEGEVLQLLADTPGPEEKTPG-------------RPSPFPPHLPFCALVET 369
P+ P QLL P +PG R + P ALV
Sbjct: 175 PAQLPP-------TYQLLGYHRAPPRASPGGWNTETLNTEDARRRARSATQAPPLALVPA 227
Query: 370 VHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEGRAQSHVPADKWPSAPEC- 428
L GR ++L +S RG GR + D P P
Sbjct: 228 RSRARPAHLRVRAAGRSRHRVLLALSRESRHLSGARERGRAGRYSNRRNLDSLPRKPSTG 287
Query: 429 YRQLGQMVGGCSGCLGTAEGSRGAGGGAMTQWAHRWQGLH 468
+ L + V CLGT A G + RWQ H
Sbjct: 288 FAALSRRVNQAISCLGTESALEKAEGPTLVT-QERWQDFH 326
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 35.8 bits (81), Expect = 0.098
Identities = 56/180 (31%), Positives = 68/180 (37%), Gaps = 44/180 (24%)
Query: 208 TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
TPS+S + SG H P P T + TH L P PHT +R A + S I
Sbjct: 2812 TPSSSTQTSGTTHTPPVPN-TMATTHGRSLPPSSPHT------VRTAWTSATSGI----- 2859
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV 325
LGT +T S V AA + +Q + PA + HPS
Sbjct: 2860 --------------LGTTHIT----EPSTVTSHTLAATTGTTQHSTPA----LSSPHPSS 2897
Query: 326 R---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVETVHT-GC--QCA 377
R SPP G A + TP R S P P A + TV T GC QCA
Sbjct: 2898 RTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTMGCEPQCA 2957
Score = 35.4 bits (80), Expect = 0.13
Identities = 55/180 (30%), Positives = 67/180 (37%), Gaps = 44/180 (24%)
Query: 208 TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
TPS+S + SG H P P T + TH L P PHT +R A + S I
Sbjct: 3959 TPSSSTQTSGTTHTPPVPNTTAT-THGRSLPPSSPHT------VRTAWTSATSGI----- 4006
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV 325
LGT +T S V AA + +Q + PA + HPS
Sbjct: 4007 --------------LGTTHIT----EPSTVTSHTPAATTSTTQHSTPA----LSSPHPSS 4044
Query: 326 R---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVET-VHTGC--QCA 377
R SPP G + TP R S P P A + T V TGC QCA
Sbjct: 4045 RTTESPPSPGTTTPGHTRGTSRTTATATPSKTRTSTLLPSSPTSAPITTVVTTGCEPQCA 4104
Score = 33.5 bits (75), Expect = 0.48
Identities = 54/180 (30%), Positives = 66/180 (36%), Gaps = 44/180 (24%)
Query: 208 TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
TPS+S + SG H P P T + TH L P PHT +R A
Sbjct: 4461 TPSSSTQTSGTTHTPPVPNTTAT-THGRSLSPSSPHT-----------------VRTAW- 4501
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV 325
S LGT +T +S AA + +Q + PA + HPS
Sbjct: 4502 -------TSATSGTLGTTHITEPSTGTS----HTPAATTGTTQHSTPA----LSSPHPSS 4546
Query: 326 R---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVET-VHTGC--QCA 377
R SPP G A + TP R S P P A + T V TGC QCA
Sbjct: 4547 RTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTTGCEPQCA 4606
Score = 33.1 bits (74), Expect = 0.63
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 208 TPSTSPKPSG--HQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACF 265
TPS+S + SG H P P T + TH L P PHT + + + + I
Sbjct: 3314 TPSSSTQTSGTTHTPPVPNTTAT-THGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPST 3372
Query: 266 RISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAP-----ATCRICAR 320
S +P+ + TG A S+ HP ++ SP S AT R A
Sbjct: 3373 GTSHTPAAT-------TGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTRATSRTTAT 3425
Query: 321 SHPS 324
+ PS
Sbjct: 3426 ATPS 3429
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 35.8 bits (81), Expect = 0.098
Identities = 47/163 (28%), Positives = 50/163 (30%), Gaps = 48/163 (29%)
Query: 207 GTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACFR 266
G P P H P GPTG G RPGGP G LG
Sbjct: 406 GVPGERGLPGAHGPPGPTGP-KGEPGFTGRPGGPGVAGALGQKGD--------------- 449
Query: 267 ISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVR 326
LG P G S + PG Q A P P + P +
Sbjct: 450 -------------LGL-PGQPGLRGPSGI-PGLQGPAGPIGPQGLPG-----LKGEPGLP 489
Query: 327 SPPGEGE-GEVLQLLADTPGP--EEKTPGRPS----PFPPHLP 362
PPGEG GE T GP PG P P PP P
Sbjct: 490 GPPGEGRAGE-----PGTAGPTGPPGVPGSPGITGPPGPPGPP 527
>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
sapiens]
Length = 439
Score = 35.8 bits (81), Expect = 0.098
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 284 PLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGE-GEVLQLLAD 342
PL + + + HPGA P Q A PA AR+ ++ + P +GE V +
Sbjct: 27 PLVFTKYSEATEHPGAPPQPPPPQQQAQPALAPPSARA-VAIETQPAQGELDAVARATGP 85
Query: 343 TPGPEEKT-----PGRPSPFP 358
PGP + PGR P P
Sbjct: 86 APGPTGEREPAAGPGRSGPGP 106
>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
sapiens]
Length = 813
Score = 35.8 bits (81), Expect = 0.098
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 284 PLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGE-GEVLQLLAD 342
PL + + + HPGA P Q A PA AR+ ++ + P +GE V +
Sbjct: 27 PLVFTKYSEATEHPGAPPQPPPPQQQAQPALAPPSARA-VAIETQPAQGELDAVARATGP 85
Query: 343 TPGPEEKT-----PGRPSPFP 358
PGP + PGR P P
Sbjct: 86 APGPTGEREPAAGPGRSGPGP 106
>gi|7662010 zinc finger protein 516 [Homo sapiens]
Length = 1163
Score = 35.4 bits (80), Expect = 0.13
Identities = 47/179 (26%), Positives = 66/179 (36%), Gaps = 31/179 (17%)
Query: 204 SHRGTPST--SPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRG-ARSQHCSLI 260
SH G P +P P G++ P C G P G T+G L R A S+
Sbjct: 869 SHSGGPCALWAPGPDGYRQTKP---CHGQE-----PHGAATQGPLAKPRQEASSKPVPAP 920
Query: 261 RLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICAR 320
F S +P+ + I R G P + P A A +P ++ +AP + +
Sbjct: 921 GGGGFSRSATPTPTVIAR-AGAQPSANSKPVEKFGVPPAGAGFAPTNKHSAPDSLKAKFS 979
Query: 321 SHPSVRSPPGEGEGEVLQLLADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALG 379
+ P PP +GEG G P P PP P + + T CA G
Sbjct: 980 AQPQ-GPPPAKGEG-----------------GAP-PLPPREPPSKAAQELRTLATCAAG 1019
>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
[Homo sapiens]
Length = 583
Score = 35.4 bits (80), Expect = 0.13
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 470 VTVVDVAGHSVSRP----------PLHGTQPGDSPMILAAVDAPIMMDRLGAMKDIRDST 519
VT++DV GHS + PLH PG+ P ++ ++D+ ++ + + D
Sbjct: 57 VTIIDVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEI 116
Query: 520 YS 521
YS
Sbjct: 117 YS 118
>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
sapiens]
Length = 441
Score = 35.0 bits (79), Expect = 0.17
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
+ AA P + A AT RI A++ P+ ++PP GE G TPG +TP
Sbjct: 155 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 213
Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
P+P A+V T A Q P L+ K+ + S + G
Sbjct: 214 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 273
Query: 412 RAQ 414
+ Q
Sbjct: 274 KVQ 276
>gi|8400715 microtubule-associated protein tau isoform 4 [Homo
sapiens]
Length = 352
Score = 35.0 bits (79), Expect = 0.17
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
+ AA P + A AT RI A++ P+ ++PP GE G TPG +TP
Sbjct: 97 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 155
Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
P+P A+V T A Q P L+ K+ + S + G
Sbjct: 156 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 215
Query: 412 RAQ 414
+ Q
Sbjct: 216 KVQ 218
>gi|8400711 microtubule-associated protein tau isoform 3 [Homo
sapiens]
Length = 383
Score = 35.0 bits (79), Expect = 0.17
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
+ AA P + A AT RI A++ P+ ++PP GE G TPG +TP
Sbjct: 97 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 155
Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
P+P A+V T A Q P L+ K+ + S + G
Sbjct: 156 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 215
Query: 412 RAQ 414
+ Q
Sbjct: 216 KVQ 218
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 35.0 bits (79), Expect = 0.17
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
+ AA P + A AT RI A++ P+ ++PP GE G TPG +TP
Sbjct: 472 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 530
Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
P+P A+V T A Q P L+ K+ + S + G
Sbjct: 531 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 590
Query: 412 RAQ 414
+ Q
Sbjct: 591 KVQ 593
>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
sapiens]
Length = 412
Score = 35.0 bits (79), Expect = 0.17
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 300 QAAASPASQAAAPATCRICARSHPSVRSPPGEGE--------GEVLQLLADTPGPEEKTP 351
+ AA P + A AT RI A++ P+ ++PP GE G TPG +TP
Sbjct: 126 RGAAPPGQKGQANAT-RIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTP 184
Query: 352 GRPSPFPPHLPFCALVETVHTGCQCALGGHQPGRFPPQILEQRKTGVESVSYFTGRGDEG 411
P+P A+V T A Q P L+ K+ + S + G
Sbjct: 185 SLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGG 244
Query: 412 RAQ 414
+ Q
Sbjct: 245 KVQ 247
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 35.0 bits (79), Expect = 0.17
Identities = 56/189 (29%), Positives = 68/189 (35%), Gaps = 50/189 (26%)
Query: 197 SDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQH 256
S+ PSS GT T P P+ T + TH L P PHT +R A +
Sbjct: 2176 SNTVTPSSALGTTHTPPVPN---------TMATTHGRSLPPSSPHT------VRTAWTSA 2220
Query: 257 CSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCR 316
S I LGT +T S V AA + +Q + PA
Sbjct: 2221 TSGI-------------------LGTTHIT----EPSTVTSHTLAATTGTTQHSTPA--- 2254
Query: 317 ICARSHPSVR---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVETVH 371
+ HPS R SPP G A + TP R S P P A + TV
Sbjct: 2255 -LSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVV 2313
Query: 372 T-GC--QCA 377
T GC QCA
Sbjct: 2314 TMGCEPQCA 2322
Score = 32.0 bits (71), Expect = 1.4
Identities = 54/189 (28%), Positives = 65/189 (34%), Gaps = 50/189 (26%)
Query: 197 SDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQH 256
S PSS GT T P P+ T + TH L P PHT
Sbjct: 3990 SSTVTPSSALGTTHTPPVPN---------TTATTHGRSLSPSSPHT-------------- 4026
Query: 257 CSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCR 316
+R A S LGT +T +S AA + +Q + PA
Sbjct: 4027 ---VRTAW--------TSATSGTLGTTHITEPSTGTS----HTPAATTGTTQHSTPA--- 4068
Query: 317 ICARSHPSVR---SPPGEGEGEVLQLLADTPGPEEKTPG--RPSPFPPHLPFCALVET-V 370
+ HPS R SPP G A + TP R S P P A + T V
Sbjct: 4069 -LSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVV 4127
Query: 371 HTGC--QCA 377
TGC QCA
Sbjct: 4128 TTGCEPQCA 4136
Score = 31.6 bits (70), Expect = 1.8
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 21/133 (15%)
Query: 197 SDQALPSSHRGTPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQH 256
S PSS GT T P P+ T + TH L P PHT + + +
Sbjct: 2733 SSTVTPSSALGTTHTPPVPN---------TTATTHGRSLSPSSPHTVRTAWTSATSGTLG 2783
Query: 257 CSLIRLACFRISVSPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAP---- 312
+ I S +P+ + TG A S+ HP ++ SP S
Sbjct: 2784 TTHITEPSTGTSHTPAAT-------TGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHT 2836
Query: 313 -ATCRICARSHPS 324
AT R A + PS
Sbjct: 2837 RATSRTTATATPS 2849
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 35.0 bits (79), Expect = 0.17
Identities = 45/167 (26%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 208 TPSTSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACFRI 267
T S +P P P GPT T S + L P P G H + A
Sbjct: 1731 TLSLAPGP----PLGPTQTLSLAPAPPLAPASP---------VGPAPAHTLTLAPASSSA 1777
Query: 268 SVSPSRSFILRYLGTGPL-TCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSV- 325
S+ S L P+ T G A+ + + SPASQA++ A P
Sbjct: 1778 SLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTM 1837
Query: 326 --RSPPGEGEGEVLQLLADTPGPEEKT-------PGRPSPFPPHLPF 363
R P + E + L L + P P P R P PP PF
Sbjct: 1838 VSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRPRRQPPPPPRSPF 1884
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 34.7 bits (78), Expect = 0.22
Identities = 62/260 (23%), Positives = 89/260 (34%), Gaps = 68/260 (26%)
Query: 210 STSPKPSGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQHCSLIRLACFRISV 269
+TSP PSG G T + P P T +L ++ + S + +
Sbjct: 640 TTSPTPSG---MGLVQTATSPTHPTTSPTHPTTSPILINVSPSTSLELATLS-------- 688
Query: 270 SPSRSFILRYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPP 329
SPS+ GT L C S++ A P + +PA S + SP
Sbjct: 689 SPSKHSDPTLPGTDSLPCSPPVSNSYTQADPMA--PRTPHPSPAHS-----SRKPLTSPA 741
Query: 330 GEGEGEVLQLLADTPGPEEKTPGRPSPFPPHLPFCALVETVHTGCQCALGG--------- 380
+ +Q L+ TP P P+P P H C L V T A GG
Sbjct: 742 PDPSESTVQSLSPTPSP-------PTPAPQHSDLC-LAMAVQTPVPTAAGGSGDRSLEEA 793
Query: 381 ---------HQPGRFPP-QILEQRKTGVES-----------------------VSYFTGR 407
G+FP Q LEQ T +ES + F+
Sbjct: 794 LGALMAALDDYRGQFPELQGLEQEVTRLESLLMQRQGLTRSRASSLSITVEHALESFSFL 853
Query: 408 GDEGRAQSHVPADKWPSAPE 427
++ + VP D+ PS+PE
Sbjct: 854 NEDEDEDNDVPGDRPPSSPE 873
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 33.9 bits (76), Expect = 0.37
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 18/82 (21%)
Query: 299 AQAAASPASQAAAPATCRICA--RSHPSVRSP--PGEGEGEVLQLL-------------- 340
A AAA P + PA R+ A + P RSP G G G++ L
Sbjct: 51 APAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPA 110
Query: 341 ADTPGPEEKTPGRPSPFPPHLP 362
A +PGP P P P PP P
Sbjct: 111 APSPGPLPARPSSPPPSPPSPP 132
>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
sapiens]
Length = 3014
Score = 33.9 bits (76), Expect = 0.37
Identities = 37/108 (34%), Positives = 40/108 (37%), Gaps = 26/108 (24%)
Query: 278 RYLGTGPLTCGRLASSAVHPGAQAAASPASQAAAPAT---CRICARSHPS-----VRSPP 329
R GTG CG L PG AAA S AAP T CR R P + PP
Sbjct: 119 RLCGTGARLCGALCFPV--PGGCAAAQH-SALAAPTTLPACRCPPRPRPRCPGRPICLPP 175
Query: 330 G------------EGEGEV---LQLLADTPGPEEKTPGRPSPFPPHLP 362
G G V L L A T G +P P PP+LP
Sbjct: 176 GGSVRLRLLCALRRAAGAVRVGLALEAATAGTPSASPSPSPPLPPNLP 223
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 33.9 bits (76), Expect = 0.37
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 15/65 (23%)
Query: 297 PGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGP--EEKTPGRP 354
PG +A PAS +A PAT P+ +PPG G G TP P PG P
Sbjct: 119 PGV-GSAPPASSSAPPAT-------PPTSGAPPGSGPGP-----TPTPPPAVTSAPPGAP 165
Query: 355 SPFPP 359
P PP
Sbjct: 166 PPTPP 170
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 33.9 bits (76), Expect = 0.37
Identities = 69/257 (26%), Positives = 98/257 (38%), Gaps = 31/257 (12%)
Query: 126 PEERSRMVDFPPYT--TLCFCRRLGDPGLGGLVYLCLPHTPTARLAQVAQAESQVLLVGV 183
P + + DFP + T C PG GL LP+ AR Q E LV
Sbjct: 436 PSPKLKDEDFPSLSASTSSSCSTAATPGPVGLA---LPYAIPARGRSAFQEEDFPALVSS 492
Query: 184 LLDLGGRGGALQFSDQALPSSHR-GTPSTSPKPSGH-QPAGPTGTCSGTHSARL------ 235
+ G +L + + SS + P S + +G QP G G+ R
Sbjct: 493 VPKPGTAPTSLVSAWNSSSSSKKVAQPPLSAQATGSGQPTRKAG--KGSRGGRKGGPPFT 550
Query: 236 ----RPGGPHTRGMLGSLRGARSQHCSLIRLACFRISVSPSRSFILRYLGTGP--LTCGR 289
GGP + +L S R S S + LA S+ PS+ + +G+ T +
Sbjct: 551 QEEEEDGGPALQELL-STRPTGSVS-STLGLA----SIQPSKVGKKKKVGSEKPGTTLPQ 604
Query: 290 LASSAVHPGA-QAAASPASQAAAPATCRICARSH--PSVRSPPGEGEGEVLQLLA-DTPG 345
+ PGA QA +PAS+A P + + RS P E G L + P
Sbjct: 605 PPPATCPPGALQAPEAPASRAEGPVAVVVNGHTEGPAPARSAPKEPPGLPRPLGSFPCPT 664
Query: 346 PEEKTPGRPSPFPPHLP 362
P+E P P PP +P
Sbjct: 665 PQEDFPALGGPCPPRMP 681
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 33.5 bits (75), Expect = 0.48
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 292 SSAVHPGAQAAASPASQAAAPATCRICARSHPSVRSPPGEGEGEVLQLLADTPGPEEKTP 351
SSA PG QAA+ PA + P PPG + V L PGP P
Sbjct: 284 SSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASV--ALPPPPGPPPPPP 341
Query: 352 ----GRPSPFPP 359
G P P PP
Sbjct: 342 LPSTGPPPPPPP 353
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,711,101
Number of Sequences: 37866
Number of extensions: 1490860
Number of successful extensions: 7609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 7322
Number of HSP's gapped (non-prelim): 512
length of query: 521
length of database: 18,247,518
effective HSP length: 107
effective length of query: 414
effective length of database: 14,195,856
effective search space: 5877084384
effective search space used: 5877084384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.