Search of human proteins with 239757183

Search of human proteins with 239757183

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757183 PREDICTED: hypothetical protein [Homo sapiens]
         (248 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757183 PREDICTED: hypothetical protein [Homo sapiens]           502   e-142
gi|239751693 PREDICTED: hypothetical protein XP_002347967 [Homo ...   502   e-142
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso...    39   0.003
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof...    39   0.004
gi|14150098 transmembrane protein 79 [Homo sapiens]                    38   0.007
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.016
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.016
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.016
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.016
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s...    37   0.016
gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]         37   0.016
gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]         37   0.016
gi|55741655 anoctamin 8 [Homo sapiens]                                 36   0.036
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]            35   0.079
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]            34   0.10 
gi|31317236 GSK-3 binding protein FRAT1 [Homo sapiens]                 34   0.10 
gi|22902136 osterix [Homo sapiens]                                     34   0.14 
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                33   0.18 
gi|126352700 elastin isoform b precursor [Homo sapiens]                33   0.23 
gi|41281612 zinc finger protein 828 [Homo sapiens]                     33   0.23 
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]    33   0.23 
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    33   0.30 
gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ...    32   0.39 
gi|4559408 colony stimulating factor 2 receptor, beta precursor ...    32   0.51 
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]       32   0.51 
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]           32   0.51 
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]           32   0.51 
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    32   0.67 
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         32   0.67 
gi|4759328 class I cytokine receptor [Homo sapiens]                    31   0.88 

>gi|239757183 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score =  502 bits (1293), Expect = e-142
 Identities = 248/248 (100%), Positives = 248/248 (100%)

Query: 1   MESTQVRGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAG 60
           MESTQVRGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAG
Sbjct: 1   MESTQVRGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAG 60

Query: 61  RRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRE 120
           RRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRE
Sbjct: 61  RRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRE 120

Query: 121 RSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQ 180
           RSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQ
Sbjct: 121 RSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQ 180

Query: 181 KEAVGENPEVVVLRLRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPAVSWQ 240
           KEAVGENPEVVVLRLRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPAVSWQ
Sbjct: 181 KEAVGENPEVVVLRLRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPAVSWQ 240

Query: 241 LSCSSLSY 248
           LSCSSLSY
Sbjct: 241 LSCSSLSY 248


>gi|239751693 PREDICTED: hypothetical protein XP_002347967 [Homo
           sapiens]
          Length = 248

 Score =  502 bits (1293), Expect = e-142
 Identities = 248/248 (100%), Positives = 248/248 (100%)

Query: 1   MESTQVRGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAG 60
           MESTQVRGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAG
Sbjct: 1   MESTQVRGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAG 60

Query: 61  RRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRE 120
           RRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRE
Sbjct: 61  RRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRE 120

Query: 121 RSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQ 180
           RSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQ
Sbjct: 121 RSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQ 180

Query: 181 KEAVGENPEVVVLRLRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPAVSWQ 240
           KEAVGENPEVVVLRLRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPAVSWQ
Sbjct: 181 KEAVGENPEVVVLRLRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPAVSWQ 240

Query: 241 LSCSSLSY 248
           LSCSSLSY
Sbjct: 241 LSCSSLSY 248


>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
           isoform B' [Homo sapiens]
          Length = 240

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 46/155 (29%), Positives = 59/155 (38%), Gaps = 33/155 (21%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAGRRAQAPD 67
           GVP PQ PA +A G VRG G  S +V     R ++A   AA   S      AG   Q P 
Sbjct: 117 GVPMPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAAAATASI-----AGAPTQYPP 170

Query: 68  PAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPG--PGLEPPAWVEGRRERSDGA 125
                                P + RG   PG+  P PG  P + PP  +   R    G 
Sbjct: 171 GR---------------GGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGR----GT 211

Query: 126 LATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEP 160
              +P     P G++P  P  +  P   +R  P P
Sbjct: 212 PMGMP-----PPGMRPPPPGMRGPPPPGMRP-PRP 240


>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
           B [Homo sapiens]
          Length = 231

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 42/139 (30%), Positives = 53/139 (38%), Gaps = 32/139 (23%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAGRRAQAPD 67
           GVP PQ PA +A G VRG G  S +V     R ++A   AA   S      AG   Q P 
Sbjct: 117 GVPMPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAAAATASI-----AGAPTQYPP 170

Query: 68  PAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPG--PGLEPPAWVEGRRERSDGA 125
                                P + RG   PG+  P PG  P + PP  +   R    G 
Sbjct: 171 GR---------------GGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGR----GT 211

Query: 126 LATLPTYSWGPTGIQPRQP 144
              +P     P G++P  P
Sbjct: 212 PMGMP-----PPGMRPPPP 225


>gi|14150098 transmembrane protein 79 [Homo sapiens]
          Length = 394

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 82  LIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTGIQP 141
           L+P    P    G E+PG    + G     P  +EG  +  D  ++   T  WG TG QP
Sbjct: 26  LVPNGRQPEGEGGAESPGAESLRVGSSAGSPTAIEGAEDGLDSTVSEAATLPWG-TGPQP 84

Query: 142 RQPYP 146
             P+P
Sbjct: 85  SAPFP 89


>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHS---AKDDLHAGRRA- 63
           GVP PQ PA +A G VRG G  S +V     R ++A    A   S   A      GR   
Sbjct: 117 GVPIPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTP 175

Query: 64  ------QAPDPAVLVLAFDVARLILIPASLAP--GLLRGGEAPGVWEPQPG------PGL 109
                   P P ++     +   +  P  L P  G   G   PG+  P PG      PG+
Sbjct: 176 PPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGM 235

Query: 110 EPP 112
            PP
Sbjct: 236 RPP 238


>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHS---AKDDLHAGRRA- 63
           GVP PQ PA +A G VRG G  S +V     R ++A    A   S   A      GR   
Sbjct: 117 GVPIPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTP 175

Query: 64  ------QAPDPAVLVLAFDVARLILIPASLAP--GLLRGGEAPGVWEPQPG------PGL 109
                   P P ++     +   +  P  L P  G   G   PG+  P PG      PG+
Sbjct: 176 PPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGM 235

Query: 110 EPP 112
            PP
Sbjct: 236 RPP 238


>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHS---AKDDLHAGRRA- 63
           GVP PQ PA +A G VRG G  S +V     R ++A    A   S   A      GR   
Sbjct: 117 GVPIPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTP 175

Query: 64  ------QAPDPAVLVLAFDVARLILIPASLAP--GLLRGGEAPGVWEPQPG------PGL 109
                   P P ++     +   +  P  L P  G   G   PG+  P PG      PG+
Sbjct: 176 PPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGM 235

Query: 110 EPP 112
            PP
Sbjct: 236 RPP 238


>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHS---AKDDLHAGRRA- 63
           GVP PQ PA +A G VRG G  S +V     R ++A    A   S   A      GR   
Sbjct: 117 GVPIPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTP 175

Query: 64  ------QAPDPAVLVLAFDVARLILIPASLAP--GLLRGGEAPGVWEPQPG------PGL 109
                   P P ++     +   +  P  L P  G   G   PG+  P PG      PG+
Sbjct: 176 PPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGM 235

Query: 110 EPP 112
            PP
Sbjct: 236 RPP 238


>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 8   GVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHS---AKDDLHAGRRA- 63
           GVP PQ PA +A G VRG G  S +V     R ++A    A   S   A      GR   
Sbjct: 117 GVPIPQAPAGLA-GPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTP 175

Query: 64  ------QAPDPAVLVLAFDVARLILIPASLAP--GLLRGGEAPGVWEPQPG------PGL 109
                   P P ++     +   +  P  L P  G   G   PG+  P PG      PG+
Sbjct: 176 PPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGM 235

Query: 110 EPP 112
            PP
Sbjct: 236 RPP 238


>gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
          Length = 590

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 29/131 (22%)

Query: 46  LAALEHSAKDDLHAGRRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQP 105
           L  ++ S  +D H GR  +  D  V+ L            S +P   RG + P    P+P
Sbjct: 54  LPQVDESPVNDSH-GRAPEEGDAEVMQLG-----------SSSPPPARGVQPPETTRPEP 101

Query: 106 GPGLEPPAWVEGRRERSDGALATLPTYSWG---PTGIQPRQPYPQWVPQYRLRAIPEPRA 162
            P L PP           G+L   P Y  G   P  +  R  Y  WVPQ      P PR 
Sbjct: 102 PPPLVPPL--------PAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ------PPPRT 147

Query: 163 APALEQRIMGN 173
                +R+  N
Sbjct: 148 IKRTRRRLSRN 158


>gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]
          Length = 499

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 29/131 (22%)

Query: 46  LAALEHSAKDDLHAGRRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQP 105
           L  ++ S  +D H GR  +  D  V+ L            S +P   RG + P    P+P
Sbjct: 54  LPQVDESPVNDSH-GRAPEEGDAEVMQLG-----------SSSPPPARGVQPPETTRPEP 101

Query: 106 GPGLEPPAWVEGRRERSDGALATLPTYSWG---PTGIQPRQPYPQWVPQYRLRAIPEPRA 162
            P L PP           G+L   P Y  G   P  +  R  Y  WVPQ      P PR 
Sbjct: 102 PPPLVPPL--------PAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQ------PPPRT 147

Query: 163 APALEQRIMGN 173
                +R+  N
Sbjct: 148 IKRTRRRLSRN 158


>gi|55741655 anoctamin 8 [Homo sapiens]
          Length = 1232

 Score = 35.8 bits (81), Expect = 0.036
 Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 16/117 (13%)

Query: 59  AGRRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPG-PGLEPPAWV-- 115
           AGRR   P P  L+   +     ++   L PG+    E     E  PG P  EPPA +  
Sbjct: 624 AGRRRPGPSPEALL---EEGSPTMVEKGLEPGVFTLAEEDDEAEGAPGSPEREPPAILFR 680

Query: 116 ----EGRRERSDGALATLPTYSWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAPALEQ 168
               EGR +  DG     P  +   T  Q RQ    W+        PE   +P L Q
Sbjct: 681 RAGGEGRDQGPDGGPDPEPGSNSDSTRRQRRQNRSSWIDP------PEEEHSPQLTQ 731


>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2028

 Score = 34.7 bits (78), Expect = 0.079
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 10/103 (9%)

Query: 29  ASMRVPPTASRSSMAQRLAALEHSAKDDLHAGRRAQAPDPAVLVLAFDVARLILIPASLA 88
           A++R   + + +S+A    AL  + + D    RRA AP P  L      AR  + P    
Sbjct: 561 ATLRGEKSRAHTSLAPTPGALRDALRRDRSPVRRAIAPTPGTLSGYRSRARTAIAP---T 617

Query: 89  PGLLRGGEAPGVWEPQPGPGL-EPPAWVEGRRERSDGALATLP 130
           PG LRG      + P+    +   PA + G + R+  +LA  P
Sbjct: 618 PGTLRG------YRPRSRRAIASTPATLRGEKSRAHTSLAPAP 654



 Score = 28.5 bits (62), Expect = 5.7
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 38  SRSSMAQRLAALEHSAKDDLHAGRRAQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEA 97
           +RSS+++ +A    + + D  A R A  P P  L      AR  +   +  PG LRG  +
Sbjct: 404 NRSSVSKAIAPAPGALRGDRSAARTAFVPTPGALHRDRSRARSAI---ASTPGTLRGNTS 460

Query: 98  PGVWEPQPGPG 108
                  P PG
Sbjct: 461 SACKAIAPTPG 471


>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1934

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 56/222 (25%), Positives = 84/222 (37%), Gaps = 29/222 (13%)

Query: 20  PGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAGRRAQAPDPAVLVLAFDVAR 79
           PG +RG+         +A+R+++ +   AL      D    R A A  P  L        
Sbjct: 362 PGALRGDR--------SAARTAIVRTPGALGR----DRSRARSAIASTPGTLQGNRSSVS 409

Query: 80  LILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTG- 138
             + PA   PG LRG  +       P PG      +   R R+  A+A+ P    G T  
Sbjct: 410 KAIAPA---PGALRGDRSAARTAFVPTPGA-----LHRDRSRARSAIASTPGTLRGNTSS 461

Query: 139 ----IQPRQPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQKEAVGENPEVVVLR 194
               I P     +    +  RAI     A    +   G  ++PN+   A+G N      R
Sbjct: 462 ACKAIAPTPGALRGYKSWARRAIAPNPGAWRGYRSTTGTAIAPNLG--ALGGNRSAA--R 517

Query: 195 LRNRGAPVYIRGAQGCSAYTPTGSRRTAPSEQARAHKALSPA 236
                 P  +RG +  S      +  T   E++RAH +L+PA
Sbjct: 518 TDIAPTPGALRGYRPRSRRAIASTPATLRGEKSRAHTSLAPA 559


>gi|31317236 GSK-3 binding protein FRAT1 [Homo sapiens]
          Length = 279

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 39/149 (26%), Positives = 56/149 (37%), Gaps = 13/149 (8%)

Query: 45  RLAALEHSAKDDLHA-GRRAQAPDPAVLVLAFDVARLILIPASLAPGLLRG-GEAPGVWE 102
           +L A +HS        G   +AP P    +  D AR   +P  L P L    G AP    
Sbjct: 52  QLDAAQHSPASPCGPPGAPLRAPGPLAAAVPADKARSPAVPLLLPPALAETVGPAP---- 107

Query: 103 PQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTGIQPRQPYP--QWVPQYRLRAIPEP 160
               PG+   A  +  R R   A   +   + GP+ + P  P       P    + IP+P
Sbjct: 108 ----PGVLRCALGDRGRVRGRAAPYCVAELATGPSALSPLPPQADLDGPPGAGKQGIPQP 163

Query: 161 RAAPALEQRIMGNVVSPNVQKEAVGENPE 189
            + P     + G   S  +Q+   G  PE
Sbjct: 164 LSGPCRRGWLRGAAASRRLQQRR-GSQPE 191


>gi|22902136 osterix [Homo sapiens]
          Length = 431

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 19/143 (13%)

Query: 83  IPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTGIQPR 142
           I A ++PG   G      W+  PG       W+ G + + DG   TLPT   GP    P 
Sbjct: 143 IHAGISPG--PGNTPTPWWDMHPGGN-----WLGGGQGQGDGLQGTLPT---GPAQ-PPL 191

Query: 143 QPYPQWVPQYRLRAIPEPRAAPALEQRIMGNVVSPNVQK-EAVGENPEVVVLRLRNRGAP 201
            P     P       P P  AP L Q    +V+  +V K +AVG + +     L   G  
Sbjct: 192 NPQLPTYPSDFAPLNPAPYPAPHLLQPGPQHVLPQDVYKPKAVGNSGQ-----LEGSGGA 246

Query: 202 VYIRGAQ--GCSAYTPTGSRRTA 222
              RGA   G   Y  +G+ R++
Sbjct: 247 KPPRGASTGGSGGYGGSGAGRSS 269


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 53/203 (26%), Positives = 72/203 (35%), Gaps = 46/203 (22%)

Query: 15   PAKIAPGKVRGEGDASMRVPP-----TASRSSMAQRLAALEHS-AKDDLHAGRRAQAPDP 68
            P + AP + R +  +  R P        SR+    RL A   S + D L++G  +    P
Sbjct: 879  PGQEAPREGRAQSCSPCRGPEGGRREAGSRAHPLLRLKAAHASLSNDSLNSGSASDGYCP 938

Query: 69   AVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPG------PGL--EPPAWVEGRRE 120
                      R  ++P  LA  L    E P   +P+P       PG   EPPA      +
Sbjct: 939  ----------REHMLPCPLA-ALASRREDPRCGQPRPSRLDLDLPGCQAEPPAREATSAD 987

Query: 121  RSDGALATLPTYSWGPT---------------GIQPRQPYPQWVPQYRLRAIPEPRAAPA 165
                 +   PTY   P                GI P      W+P   L  +PE  AA  
Sbjct: 988  ARVRTIKLSPTYQHVPLLEGASRAGAEPLAGPGISPGARKQAWLPADHLSKVPEKLAAAP 1047

Query: 166  LEQRIMGNVVSPNVQKEAVGENP 188
            L      +V S  +QK A  E P
Sbjct: 1048 L------SVASKALQKLAAQEGP 1064


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 59  AGRRAQAPDPAVLVLAFDVARLILIPASLA--PGLLRGGEAPGVWEPQPGPGLEPPAWVE 116
           AG  A AP P VL+L       IL P+     PG + GG   GV+ P  GPG +P   V 
Sbjct: 2   AGLTAAAPRPGVLLLLLS----ILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVP 57

Query: 117 G 117
           G
Sbjct: 58  G 58


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 22/152 (14%)

Query: 10  PAPQLPAKIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDD--LHAGRRAQAPD 67
           P PQ PA ++P  V+    A++  P    +S   + L     S+ +   L A      P 
Sbjct: 205 PEPQKPAPVSPESVK----ATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPS 260

Query: 68  PAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEP---------QPGPGLEPPAWVEGR 118
           PA    A   +R      S  P      E+P  W+P         +P P + P +W  G 
Sbjct: 261 PA----ASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPG- 315

Query: 119 RERSDGALATLPTYSWGPTGIQPRQPYPQWVP 150
              S     + P+ S GP   +P +P P   P
Sbjct: 316 PPGSPRPWKSNPSASSGPW--KPAKPAPSVSP 345


>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
          Length = 671

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 7   RGVPAPQLPAKIAPGKVRGEGDASMRVPPTASRSSM--AQRLAALEH----SAKDDLHAG 60
           R    P+ P++ AP    GE      VP  A R+     +    L H     A+ +  AG
Sbjct: 243 RAAREPEEPSQDAPRDPAGEPAGGEEVPAPADRAPARSCREAEGLAHPGDTGARGEDAAG 302

Query: 61  RRAQAPDPAVLVLAFDVARLILIPASLAPGL-LRGGEAPGVWEPQPGPGLEPPA 113
            R   P P  +  A D +R   +P    P +   GG       P P   ++PP+
Sbjct: 303 HRRAEPGPGEVRTAEDASRTGAVPVKTVPLVDSEGGSGRAPAAPDPA-SVDPPS 355


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 42/161 (26%), Positives = 53/161 (32%), Gaps = 13/161 (8%)

Query: 17  KIAPGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLH--AGRRAQAPDPAVLVLA 74
           K+ P +V G     +  PP + R+  A RLA L  +    L    G  A A  PA   L 
Sbjct: 10  KVPPVRVYGPDCVVLMEPPLSKRNPPALRLADLATAQVQPLQNMTGFPALAGPPAHSQLR 69

Query: 75  FDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLEPPAWVEGRRERSDGALATLPTY-- 132
             VA L L      PG+      P         GL PP+        +  A A       
Sbjct: 70  AAVAHLRLRDLGADPGVATTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVA 129

Query: 133 ---------SWGPTGIQPRQPYPQWVPQYRLRAIPEPRAAP 164
                      G +G QP  P P   P     + P P   P
Sbjct: 130 HPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPPPPP 170


>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
           isoform 1 [Homo sapiens]
          Length = 575

 Score = 32.3 bits (72), Expect = 0.39
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 13/73 (17%)

Query: 92  LRGGEAPGVWEPQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTGIQPRQPYPQWVPQ 151
           LR  +APG  +P PG G +P AW             T P  +  P+G++P    P   P 
Sbjct: 36  LRRIKAPGRDQPTPGDGEQPGAW------------PTAPLAAPRPSGLEP-PGTPGPGPA 82

Query: 152 YRLRAIPEPRAAP 164
             L A   PR AP
Sbjct: 83  LPLGAASSPRNAP 95


>gi|4559408 colony stimulating factor 2 receptor, beta precursor
           [Homo sapiens]
          Length = 897

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 20/118 (16%)

Query: 8   GVPAPQLPAKI---------APGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDD-L 57
           G+P+ Q P+           APG V+   +  + +PP   RS  + R   +   AK   L
Sbjct: 735 GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVL 794

Query: 58  HAGRR-----AQAPDPAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLE 110
           + G R       +P P  L++   V     +P  L PG L     P      PGPG E
Sbjct: 795 NPGERPADVSPTSPQPEGLLVLQQVGDYCFLP-GLGPGPLSLRSKPS----SPGPGPE 847


>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
          Length = 1006

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 36/140 (25%), Positives = 45/140 (32%), Gaps = 18/140 (12%)

Query: 103 PQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTGIQPRQPYPQWVPQYR--------L 154
           P P PG + P+     R R  G     P +  G    QP  P  +W    R         
Sbjct: 283 PPPIPGSDQPSSHGRPRFRETGDSEDCPPFRAGTPPQQPTAPSSEWPGPQRSPGTGPRWT 342

Query: 155 RAIPEPRAAPA-------LEQRIMGNVVSPNVQKEAVGENPEVVVLRLRNRGAPVYIRG- 206
             +P P   PA         +R     VSP  +    GENP +          P  +RG 
Sbjct: 343 APLPRPAPLPAKRPGDSPASKRPRPGGVSPEARDPPKGENP-LCSSEAAGETGPTQVRGP 401

Query: 207 -AQGCSAYTPTGSRRTAPSE 225
            A G       G    AP E
Sbjct: 402 DALGGGRLQGKGREGKAPGE 421


>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
          Length = 1156

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)

Query: 104  QPGPGLEPPAWVEGRRERSDGALATLPTYSWGPT----GIQPRQPYPQWVPQYRLRAIPE 159
            Q   GL+ P  ++   +    A AT P  S   T     +   QPYPQ   Q +   + E
Sbjct: 927  QSASGLQQPQHIQ--LQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQVSE 984

Query: 160  PRAAPALEQRIMGNVVSPNVQKEAVGENP 188
            P A+     ++ G  +SP+ Q+   G +P
Sbjct: 985  PTASAPSSAQVSGQPLSPSAQQAQQGLSP 1013


>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
          Length = 1160

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)

Query: 104  QPGPGLEPPAWVEGRRERSDGALATLPTYSWGPT----GIQPRQPYPQWVPQYRLRAIPE 159
            Q   GL+ P  ++   +    A AT P  S   T     +   QPYPQ   Q +   + E
Sbjct: 931  QSASGLQQPQHIQ--LQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQVSE 988

Query: 160  PRAAPALEQRIMGNVVSPNVQKEAVGENP 188
            P A+     ++ G  +SP+ Q+   G +P
Sbjct: 989  PTASAPSSAQVSGQPLSPSAQQAQQGLSP 1017


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 40/154 (25%), Positives = 53/154 (34%), Gaps = 48/154 (31%)

Query: 10  PAPQLPAKIA--PGKVRGEGDASMRVPPTASRSSMAQRLAALEHSAKDDLHAGRRAQAPD 67
           P P  PA +A  PG   G   A+  VPP A+  +                  G    AP 
Sbjct: 272 PPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQN-----------------GGSAGAAPA 314

Query: 68  PAVLVLAFDVARLILIPASLAPGLLRGGEAPGVWEPQPGPGLE-----------PPAWVE 116
           PA              PA+  P  + G   PG     P PG++           PPA   
Sbjct: 315 PA--------------PAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPA--- 357

Query: 117 GRRERSDGALATLPTYSWGPTGIQPRQPYPQWVP 150
            +   + G  +T  +   GPT +Q   P P  VP
Sbjct: 358 AQTLAASGPASTAASMVIGPT-MQGALPSPAAVP 390



 Score = 28.1 bits (61), Expect = 7.4
 Identities = 43/159 (27%), Positives = 52/159 (32%), Gaps = 32/159 (20%)

Query: 10  PAPQLPAKIA----------PGKVRGEGDASMRVPPTASRSSMAQRL---AALEHSAKDD 56
           PAP  PAK A          PG   G G      P   +    AQ L   AAL +S    
Sbjct: 152 PAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSH--- 208

Query: 57  LHAGRRAQAPDPAVLVLAFDVARLILIPASLAPGLL---------RGGEAPGVWEPQPGP 107
                   A  PAV ++    A L+ +P   APG +             AP    P   P
Sbjct: 209 -------HAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP 261

Query: 108 GLEPPAWVEGRRERSDGALATLPTYSWGPTGIQPRQPYP 146
               PA        +   LA  P +  GP    P  P P
Sbjct: 262 APAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP 300


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 14/83 (16%)

Query: 107 PGLEPPAWVEGRRERSDGALATLPTYSWGPTGIQPRQP----------YPQWVPQYRLRA 156
           P L PP+ ++GRR R+    A+  + S  P+  +PR+P           PQ   + R RA
Sbjct: 333 PPLPPPSTLQGRRPRAQAPSAS-HSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRA 391

Query: 157 ---IPEPRAAPALEQRIMGNVVS 176
              +P+P + P   Q I+ +V+S
Sbjct: 392 PAPVPQPFSLPEPSQPILPSVLS 414


>gi|4759328 class I cytokine receptor [Homo sapiens]
          Length = 636

 Score = 31.2 bits (69), Expect = 0.88
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 92  LRGGEAPGVWE-PQPGPGLEPPAWVEGRRERSDGALATLPTYSWGPTG 138
           +RGG     W  P P   L P  WV  +R R  G+   L  Y  GP G
Sbjct: 1   MRGGRGAPFWLWPLPKLALLPLLWVLFQRTRPQGSAGPLQCYGVGPLG 48


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,254,378
Number of Sequences: 37866
Number of extensions: 713931
Number of successful extensions: 2782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 2688
Number of HSP's gapped (non-prelim): 222
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.