Search of human proteins with 119395725

Search of human proteins with 119395725

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|119395725 cytoplasmic polyadenylation element binding
protein 1 isoform 1 [Homo sapiens]
         (561 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|119395725 cytoplasmic polyadenylation element binding protein...  1160   0.0  
gi|119395722 cytoplasmic polyadenylation element binding protein...  1005   0.0  
gi|119395720 cytoplasmic polyadenylation element binding protein...  1005   0.0  
gi|119395718 cytoplasmic polyadenylation element binding protein...   999   0.0  
gi|50345881 cytoplasmic polyadenylation element binding protein ...   214   1e-55
gi|189027090 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|33188439 cytoplasmic polyadenylation element binding protein ...   214   2e-55
gi|33188441 cytoplasmic polyadenylation element binding protein ...   214   2e-55
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          37   0.063
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          37   0.063
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        35   0.14 
gi|4505255 musashi 1 [Homo sapiens]                                    34   0.31 
gi|150378498 fragile site-associated protein [Homo sapiens]            34   0.31 
gi|50053795 eukaryotic translation initiation factor 4B [Homo sa...    34   0.31 
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        33   0.53 
gi|21450675 RNA binding motif protein 46 [Homo sapiens]                33   0.53 
gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]      33   0.53 
gi|205277471 cochlin precursor [Homo sapiens]                          33   0.69 
gi|4758022 cochlin precursor [Homo sapiens]                            33   0.69 
gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]     33   0.69 
gi|148833511 RNA binding motif protein 47 isoform b [Homo sapiens]     33   0.69 
gi|24431975 hypothetical protein LOC26148 [Homo sapiens]               33   0.91 
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                33   0.91 
gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform ...    32   1.2  
gi|55956919 heterogeneous nuclear ribonucleoprotein A/B isoform ...    32   1.2  
gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo...    32   1.5  
gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]                  32   1.5  
gi|133922582 zinc finger protein 358 [Homo sapiens]                    32   1.5  
gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]              32   2.0  
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi...    32   2.0  

>gi|119395725 cytoplasmic polyadenylation element binding protein 1
           isoform 1 [Homo sapiens]
          Length = 561

 Score = 1160 bits (3000), Expect = 0.0
 Identities = 561/561 (100%), Positives = 561/561 (100%)

Query: 1   MAFPLEEEAGRIKDCWDNQEAPALSTCSNANIFRRINAILDNSLDFSRVCTTPINRGIHD 60
           MAFPLEEEAGRIKDCWDNQEAPALSTCSNANIFRRINAILDNSLDFSRVCTTPINRGIHD
Sbjct: 1   MAFPLEEEAGRIKDCWDNQEAPALSTCSNANIFRRINAILDNSLDFSRVCTTPINRGIHD 60

Query: 61  HLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSA 120
           HLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSA
Sbjct: 61  HLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSA 120

Query: 121 QSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRS 180
           QSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRS
Sbjct: 121 QSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRS 180

Query: 181 SSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAAL 240
           SSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAAL
Sbjct: 181 SSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAAL 240

Query: 241 AAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP 300
           AAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP
Sbjct: 241 AAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP 300

Query: 301 PRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLV 360
           PRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLV
Sbjct: 301 PRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLV 360

Query: 361 FELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQR 420
           FELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQR
Sbjct: 361 FELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQR 420

Query: 421 LDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYL 480
           LDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYL
Sbjct: 421 LDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYL 480

Query: 481 KAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRH 540
           KAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRH
Sbjct: 481 KAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRH 540

Query: 541 SMEGLRHHSPLMRNQKNRDSS 561
           SMEGLRHHSPLMRNQKNRDSS
Sbjct: 541 SMEGLRHHSPLMRNQKNRDSS 561


>gi|119395722 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 76  MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 135
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60

Query: 136 GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 195
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120

Query: 196 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 255
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180

Query: 256 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 315
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240

Query: 316 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 375
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS
Sbjct: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300

Query: 376 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 435
           HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM
Sbjct: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360

Query: 436 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 495
           LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
Sbjct: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420

Query: 496 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 555
           TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ
Sbjct: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480

Query: 556 KNRDSS 561
           KNRDSS
Sbjct: 481 KNRDSS 486


>gi|119395720 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 76  MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 135
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60

Query: 136 GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 195
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120

Query: 196 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 255
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180

Query: 256 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 315
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240

Query: 316 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 375
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS
Sbjct: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300

Query: 376 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 435
           HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM
Sbjct: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360

Query: 436 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 495
           LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
Sbjct: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420

Query: 496 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 555
           TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ
Sbjct: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480

Query: 556 KNRDSS 561
           KNRDSS
Sbjct: 481 KNRDSS 486


>gi|119395718 cytoplasmic polyadenylation element binding protein 1
           isoform 2 [Homo sapiens]
          Length = 491

 Score =  999 bits (2583), Expect = 0.0
 Identities = 486/491 (98%), Positives = 486/491 (98%), Gaps = 5/491 (1%)

Query: 76  MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 135
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60

Query: 136 GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 195
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120

Query: 196 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 255
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180

Query: 256 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 315
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240

Query: 316 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP-----PKGYVYLVFELEKSVRSL 370
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP     PKGYVYLVFELEKSVRSL
Sbjct: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFELEKSVRSL 300

Query: 371 LQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVG 430
           LQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVG
Sbjct: 301 LQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVG 360

Query: 431 ALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEI 490
           ALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEI
Sbjct: 361 ALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEI 420

Query: 491 KTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSP 550
           KTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSP
Sbjct: 421 KTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSP 480

Query: 551 LMRNQKNRDSS 561
           LMRNQKNRDSS
Sbjct: 481 LMRNQKNRDSS 491


>gi|50345881 cytoplasmic polyadenylation element binding protein 3
           [Homo sapiens]
          Length = 698

 Score =  214 bits (546), Expect = 1e-55
 Identities = 115/257 (44%), Positives = 159/257 (61%), Gaps = 13/257 (5%)

Query: 309 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 368
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 439 YSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQ 498

Query: 369 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 428
           +L+ AC    L  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 499 ALIDAC----LEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 552

Query: 429 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 487
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 553 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 612

Query: 488 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 541
           V+++     K+V++ PY L+D +C       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 613 VQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHS 672

Query: 542 MEGLRHHSPLMRNQKNR 558
             G   H PL++   +R
Sbjct: 673 RAGREFHKPLVKEGGDR 689


>gi|189027090 cytoplasmic polyadenylation element binding protein 4
           [Homo sapiens]
          Length = 729

 Score =  214 bits (545), Expect = 2e-55
 Identities = 115/257 (44%), Positives = 160/257 (62%), Gaps = 13/257 (5%)

Query: 309 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 368
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 470 YSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQ 529

Query: 369 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 428
           +L+ AC    +  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 530 ALIDAC----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 583

Query: 429 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 487
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 584 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 643

Query: 488 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 541
           V+++  +  K+V++ PY L+D LC       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 644 VQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHS 703

Query: 542 MEGLRHHSPLMRNQKNR 558
             G   H PL++   +R
Sbjct: 704 RAGREFHKPLVKEGGDR 720


>gi|33188439 cytoplasmic polyadenylation element binding protein 2
           isoform B [Homo sapiens]
          Length = 589

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 284 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 343
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 308 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 364

Query: 344 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 403
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 365 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 418

Query: 404 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 462
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 419 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 478

Query: 463 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 516
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 479 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 538

Query: 517 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 558
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 539 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580


>gi|33188441 cytoplasmic polyadenylation element binding protein 2
           isoform A [Homo sapiens]
          Length = 559

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 284 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 343
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 278 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 334

Query: 344 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 403
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 335 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 388

Query: 404 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 462
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 389 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 448

Query: 463 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 516
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 449 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 508

Query: 517 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 558
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 509 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 550


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 36.6 bits (83), Expect = 0.063
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 310 SCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRS 369
           S K+F+GG+P +  E  L   F+ FG ++      D +  R  P+G+ ++ FE E+SV  
Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR--PRGFGFITFEDEQSVDQ 169

Query: 370 LLQACSHD 377
            +    HD
Sbjct: 170 AVNMHFHD 177



 Score = 33.5 bits (75), Expect = 0.53
 Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 31/197 (15%)

Query: 312 KVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLL 371
           K+F+GG+ W  T+  L + F  +G +      KD    +   +G+ ++ F+    V ++L
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQ--SRGFGFVKFKDPNCVGTVL 68

Query: 372 QACSH---------DPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLD 422
            +  H          P +P G       M   R R KE            + + P     
Sbjct: 69  ASRPHTLDGRNIDPKPCTPRG-------MQPERTRPKE-----------GWQKGPRSDNS 110

Query: 423 PSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKY-PIGSGRVTFNNQRSYLK 481
            S  +FVG +        L       FG V    +  D  K  P G G +TF +++S  +
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169

Query: 482 AVSAAFVEIKTTKFTKK 498
           AV+  F +I   K   K
Sbjct: 170 AVNMHFHDIMGKKVEVK 186


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 36.6 bits (83), Expect = 0.063
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 310 SCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRS 369
           S K+F+GG+P +  E  L   F+ FG ++      D +  R  P+G+ ++ FE E+SV  
Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR--PRGFGFITFEDEQSVDQ 169

Query: 370 LLQACSHD 377
            +    HD
Sbjct: 170 AVNMHFHD 177



 Score = 33.5 bits (75), Expect = 0.53
 Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 31/197 (15%)

Query: 312 KVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLL 371
           K+F+GG+ W  T+  L + F  +G +      KD    +   +G+ ++ F+    V ++L
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQ--SRGFGFVKFKDPNCVGTVL 68

Query: 372 QACSH---------DPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLD 422
            +  H          P +P G       M   R R KE            + + P     
Sbjct: 69  ASRPHTLDGRNIDPKPCTPRG-------MQPERTRPKE-----------GWQKGPRSDNS 110

Query: 423 PSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKY-PIGSGRVTFNNQRSYLK 481
            S  +FVG +        L       FG V    +  D  K  P G G +TF +++S  +
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169

Query: 482 AVSAAFVEIKTTKFTKK 498
           AV+  F +I   K   K
Sbjct: 170 AVNMHFHDIMGKKVEVK 186


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 24/196 (12%)

Query: 74   SRMLFPTSAQESSRGLPDA---NDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSM 130
            S+ L P +  +    +P A      CL  Q+  + G     S   + +++ +  H+   M
Sbjct: 2436 SQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHN--GM 2493

Query: 131  LHNPLGNV----LGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDS 186
            L  P   V    +G+PP S     P  S L    PA   R S   +     S SSS S S
Sbjct: 2494 LSVPAPGVPHSDVGEPPASTGAQQP--SALAALQPAKERRSSSSSSSS--SSSSSSSSSS 2549

Query: 187  DTSGFSSGSDHLSDLISSLRISP-----------PLPFLSLSGGGPRDPLKMGVGSRMDQ 235
             +S  SSGS       SSL + P           P P  ++  G P +P       R   
Sbjct: 2550 SSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSS 2609

Query: 236  EQAALAAVTPSPTSAS 251
              ++ ++ + S +S+S
Sbjct: 2610 SSSSSSSSSSSSSSSS 2625


>gi|4505255 musashi 1 [Homo sapiens]
          Length = 362

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 306 NPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEK 365
           +P   CK+F+GG+ W  T+ GL   F  FG +      +D    R   +G+ ++ F  + 
Sbjct: 15  SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKR--SRGFGFVTFMDQA 72

Query: 366 SVRSLLQACSHD 377
            V  +L    H+
Sbjct: 73  GVDKVLAQSRHE 84


>gi|150378498 fragile site-associated protein [Homo sapiens]
          Length = 5005

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 319 PWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDP 378
           PWDIT   LVN ++V G L V     DG  P CP      L FE++K  R  +      P
Sbjct: 807 PWDITV--LVNLYKVHGRLPVHGT-TDG--PECPTAFLERLCFEMKKGFRETMLQLILSP 861

Query: 379 LS 380
           L+
Sbjct: 862 LN 863


>gi|50053795 eukaryotic translation initiation factor 4B [Homo
           sapiens]
          Length = 611

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 305 KNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELE 364
           K+P Y+   FLG +P+D+TE  +   FR     +V  P +     R   KG+ Y  FE  
Sbjct: 92  KSPPYTA--FLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERL--KGFGYAEFE-- 145

Query: 365 KSVRSLLQACS 375
             + SLL A S
Sbjct: 146 -DLDSLLSALS 155


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 59/239 (24%), Positives = 89/239 (37%), Gaps = 35/239 (14%)

Query: 43   SLDFSRVCTTPINRGIHDHLPDFQDSEETVTSRMLFPTSAQESSRGLP-----DANDLCL 97
            +L F +  TT  +     H   F DS  T +S ++  ++   SS G P      A+    
Sbjct: 2628 ALSFGQESTTFHSSPGSTHTTLFPDS--TTSSGIVEASTRVHSSTGSPRTTLSPASSTSP 2685

Query: 98   GLQSLSLTGWDRPWSTQDSDSSAQSSTHSV--LSMLHNPLGNVLGKPPLSFLPLDPLGSD 155
            GLQ  S T    P ST  + S   ++T  V   +  H   G+     P +  P     S 
Sbjct: 2686 GLQGESTTFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGST----PTTHFPASSTTSG 2741

Query: 156  LVDK----FPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGSDH------------LS 199
              +K      +P   G+   T     S +S   +S TS  S GS              LS
Sbjct: 2742 HSEKSTIFHSSPDASGT---TPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTTPGLS 2798

Query: 200  DLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWPGAS 258
            +  ++   SP  P  +LS   P     +GVG      ++   +   + + AS   PG S
Sbjct: 2799 EASTTFYSSPRSPTTTLS---PASMTSLGVGEESTTSRSQPGSTHSTVSPASTTTPGLS 2854


>gi|21450675 RNA binding motif protein 46 [Homo sapiens]
          Length = 533

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 20/92 (21%)

Query: 295 WSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGS-----LSVEWPGKDGKHP 349
           W G  PPR        C+VF+G +P D+ E  LV  F   G      L +E+ G++    
Sbjct: 52  WEGPPPPRG-------CEVFVGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGEN---- 100

Query: 350 RCPPKGYVYLVFELEKSVRSLLQACSHDPLSP 381
               +GY ++++  ++  +  ++  ++  + P
Sbjct: 101 ----RGYAFVMYTTKEEAQLAIRILNNYEIRP 128


>gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]
          Length = 322

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 310 SCKVFLGGVPWDITEAGLVNTFRVFG---SLSVEWPGKDGKHPRCPPKGYVYLVFELEKS 366
           S  +FLGG+P+++TE  ++  F  +G   ++++    K GK      KG+ +L +E ++S
Sbjct: 35  SAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGK-----SKGFCFLCYEDQRS 89


>gi|205277471 cochlin precursor [Homo sapiens]
          Length = 550

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 91  DANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPP 143
           DAN    G+QS  L+ W   ++     SS Q +T   +S  H P G  L K P
Sbjct: 105 DAN----GIQSQMLSRWSASFTVTKGKSSTQEATGQAVSTAHPPTGKRLKKTP 153


>gi|4758022 cochlin precursor [Homo sapiens]
          Length = 550

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 91  DANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPP 143
           DAN    G+QS  L+ W   ++     SS Q +T   +S  H P G  L K P
Sbjct: 105 DAN----GIQSQMLSRWSASFTVTKGKSSTQEATGQAVSTAHPPTGKRLKKTP 153


>gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]
          Length = 593

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 24/85 (28%)

Query: 295 WSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFG-----SLSVEWPGKDGKHP 349
           W G  P R        C+VF+G +P D+ E  LV  F   G      L +++ GK+    
Sbjct: 62  WEGPHPQRG-------CEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKN---- 110

Query: 350 RCPPKGYVYLVF----ELEKSVRSL 370
               +GY ++++    E +++VR L
Sbjct: 111 ----RGYAFVMYCHKHEAKRAVREL 131


>gi|148833511 RNA binding motif protein 47 isoform b [Homo sapiens]
          Length = 524

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 24/85 (28%)

Query: 295 WSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFG-----SLSVEWPGKDGKHP 349
           W G  P R        C+VF+G +P D+ E  LV  F   G      L +++ GK+    
Sbjct: 62  WEGPHPQRG-------CEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKN---- 110

Query: 350 RCPPKGYVYLVF----ELEKSVRSL 370
               +GY ++++    E +++VR L
Sbjct: 111 ----RGYAFVMYCHKHEAKRAVREL 131


>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
          Length = 1247

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 37/207 (17%)

Query: 66  QDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTH 125
           +D+ +T    +      ++  +  P+A+D CL  Q    +  DR    Q SDS   SS  
Sbjct: 476 KDTYDTSIDSLEENLDKKKKGKKFPEASDRCLRSQLSDSSSADRCLRNQSSDS---SSAC 532

Query: 126 SVLSMLHNPL-------GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDS 178
             + +  NP        G+  G  P   LP D   ++ ++    PSV     + RP    
Sbjct: 533 LEIKVPKNPSAKRSKKEGHPGGTTPKGLLP-DSFHTETLEDTEKPSV-----NERP---- 582

Query: 179 RSSSPSDSDTSGFSSG-------SDHLSDLISSLR--ISPPLPFLSLSGGG-PRDPLKMG 228
              S  D++  G   G        + L   +  LR  I P    ++ +G   P + L++ 
Sbjct: 583 ---SEKDAEQEGEGGGIITRQTLKNMLDKEVKELRGEIFPSRDPITTAGQPLPGERLEIY 639

Query: 229 VGSRMDQEQAALAAVTPSPTSASKRWP 255
           V S+MD++ A +    PS + A KR P
Sbjct: 640 VQSKMDEKNAHI----PSESIACKRDP 662


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 46/171 (26%), Positives = 59/171 (34%), Gaps = 17/171 (9%)

Query: 140  GKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGF-------- 191
            G PPL+    +P           P  RG RL    +  + SS    SD SGF        
Sbjct: 1940 GPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIK 1999

Query: 192  -SSGSDHLSDLISSLRISPPLP-FLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTS 249
             S G       +SS   +   P   S   G P  P      SR ++ +   AA    P  
Sbjct: 2000 ESPGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELR---AAPRQGPAP 2056

Query: 250  ASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP 300
            A +R P A   P     E P    + E  +RL  +A A    T      LP
Sbjct: 2057 ARQRPPAARPSPG----ERPARRTTSESPSRLPVRAPAARPETVKRYASLP 2103


>gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform b
           [Homo sapiens]
          Length = 285

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 40/199 (20%), Positives = 78/199 (39%), Gaps = 38/199 (19%)

Query: 305 KNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSL---SVEWPGKDGKHPRCPPKGYVYLVF 361
           KN   + K+F+GG+ WD ++  L + F  FG +   +++     G+      +G+ +++F
Sbjct: 64  KNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR-----SRGFGFILF 118

Query: 362 ELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRL 421
           +   SV  +L    H             ++  R +  K               ++ + + 
Sbjct: 119 KDAASVEKVLDQKEH-------------RLDGRVIDPK---------------KAMAMKK 150

Query: 422 DPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYL 480
           DP + +FVG L+     E +     + FG +    +  D K     G   +TF  +    
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 209

Query: 481 KAVSAAFVEIKTTKFTKKV 499
           K +   F  +  +K   KV
Sbjct: 210 KVLEKKFHTVSGSKCEIKV 228


>gi|55956919 heterogeneous nuclear ribonucleoprotein A/B isoform a
           [Homo sapiens]
          Length = 332

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 40/199 (20%), Positives = 78/199 (39%), Gaps = 38/199 (19%)

Query: 305 KNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSL---SVEWPGKDGKHPRCPPKGYVYLVF 361
           KN   + K+F+GG+ WD ++  L + F  FG +   +++     G+      +G+ +++F
Sbjct: 64  KNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR-----SRGFGFILF 118

Query: 362 ELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRL 421
           +   SV  +L    H             ++  R +  K               ++ + + 
Sbjct: 119 KDAASVEKVLDQKEH-------------RLDGRVIDPK---------------KAMAMKK 150

Query: 422 DPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYL 480
           DP + +FVG L+     E +     + FG +    +  D K     G   +TF  +    
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 209

Query: 481 KAVSAAFVEIKTTKFTKKV 499
           K +   F  +  +K   KV
Sbjct: 210 KVLEKKFHTVSGSKCEIKV 228


>gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo
           sapiens]
          Length = 420

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)

Query: 312 KVFLGGVPWDITEAGLVNTFRVFGSL-SVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSL 370
           KVF+GG+  D +E  +   F  FG + ++E P     + R   +G+ ++ +  E+ V+ L
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNER---RGFCFITYTDEEPVKKL 290

Query: 371 LQACSH 376
           L++  H
Sbjct: 291 LESRYH 296


>gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]
          Length = 2030

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 81   SAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNV-- 138
            S   + RG   A+   +  +S+ +T    P +   +   + SS  S  S   +  GN+  
Sbjct: 1641 SGTSTPRGNVLASHSPMSPESIKMTHRHSPMNLMGTGRHSSSSLSSHAS---SEAGNMVM 1697

Query: 139  LGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHL 198
            LG   +   P D L   +   +P P  +GS  +   +  S++S  S S +S  S+ S  +
Sbjct: 1698 LGDGSMGDAPED-LYHHMQLAYPNPRYQGSVTNVSVLSSSQASPSSSSLSSTHSAPSQMI 1756

Query: 199  SDLISSLRISPPLP 212
            +   SS R SP LP
Sbjct: 1757 TSAPSSARGSPSLP 1770


>gi|133922582 zinc finger protein 358 [Homo sapiens]
          Length = 568

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 23/133 (17%)

Query: 171 DTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPR-DPLKMGV 229
           D  P  ++  S P D D    SS  D   D+I  + +       +LS G P+ DP+  G+
Sbjct: 70  DLDPDAEAPGSEPQDPDP--MSSSFDLDPDVIGPVPLILDPNSDTLSPGDPKVDPISSGL 127

Query: 230 GSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVN 289
            +   Q  A   AV P+P S                   P  PFS     R  R+++ ++
Sbjct: 128 -TATPQVLATSPAVLPAPAS-------------------PPRPFSCPDCGRAFRRSSGLS 167

Query: 290 EATCTWSGQLPPR 302
           +   T SG+ P R
Sbjct: 168 QHRRTHSGEKPYR 180


>gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]
          Length = 524

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 231 SRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNE 290
           S +D +QA      P P+     WPG +  P+      P+ P  I R   L   A    E
Sbjct: 19  SELDAKQAEAIMGAPGPSLTGSPWPGTAA-PAASYTPTPRSPRFIGRRQSLIEDARKERE 77

Query: 291 ATCTWSGQLPPRNYKNPI 308
           A    +    P    +P+
Sbjct: 78  AAVAAAAAAVPSEPGDPL 95


>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
           sapiens]
          Length = 437

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 10/106 (9%)

Query: 267 EAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAG 326
           E  ++    +R  ++ R+   V      W     P    +   +  +F+  V +D TE+ 
Sbjct: 61  ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKT--LFVARVNYDTTESK 118

Query: 327 LVNTFRVFGSLS---VEWPGKDGKHPRCPPKGYVYLVFELEKSVRS 369
           L   F V+G +    + +  + GK     P+GY ++ +E E+ + S
Sbjct: 119 LRREFEVYGPIKRIHMVYSKRSGK-----PRGYAFIEYEHERDMHS 159


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,631,951
Number of Sequences: 37866
Number of extensions: 1143955
Number of successful extensions: 3382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 3327
Number of HSP's gapped (non-prelim): 90
length of query: 561
length of database: 18,247,518
effective HSP length: 107
effective length of query: 454
effective length of database: 14,195,856
effective search space: 6444918624
effective search space used: 6444918624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.