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Search of human proteins with 239756245
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756245 PREDICTED: hypothetical protein [Homo sapiens] 500 e-142
gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo ... 495 e-140
gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo ... 446 e-126
gi|62955829 hypothetical protein LOC90871 [Homo sapiens] 191 6e-49
gi|238859557 regulatory factor X1 [Homo sapiens] 38 0.009
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] 37 0.019
gi|41281612 zinc finger protein 828 [Homo sapiens] 35 0.056
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 35 0.073
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 34 0.12
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.12
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.12
gi|4507379 TATA box binding protein [Homo sapiens] 33 0.16
gi|20162554 Kruppel-like factor 14 [Homo sapiens] 33 0.16
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 33 0.16
gi|156938257 leucine rich repeat containing 16B [Homo sapiens] 33 0.21
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 33 0.28
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 32 0.36
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 0.36
gi|157041215 SPR1 protein [Homo sapiens] 32 0.47
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 32 0.62
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 32 0.62
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 32 0.62
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 32 0.62
gi|31982899 seven in absentia homolog 2 [Homo sapiens] 32 0.62
gi|33350928 disabled homolog 1 [Homo sapiens] 32 0.62
gi|21314684 single stranded DNA binding protein 3 isoform b [Hom... 32 0.62
gi|221219024 pleckstrin homology-like domain, family B, member 1... 31 0.81
gi|38424073 pleckstrin homology-like domain, family B, member 1 ... 31 0.81
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 31 0.81
>gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 500 bits (1288), Expect = e-142
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1 MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
Query: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF
Sbjct: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
Query: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
>gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo
sapiens]
Length = 235
Score = 495 bits (1274), Expect = e-140
Identities = 234/235 (99%), Positives = 234/235 (99%)
Query: 1 MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
MDPFAGNADPS TQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
Query: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF
Sbjct: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
Query: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
>gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo
sapiens]
Length = 216
Score = 446 bits (1147), Expect = e-126
Identities = 215/235 (91%), Positives = 215/235 (91%), Gaps = 19/235 (8%)
Query: 1 MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
MDPFAGNADPS TQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
Query: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ EAEF
Sbjct: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------------EAEF 101
Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 102 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 161
Query: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 162 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
>gi|62955829 hypothetical protein LOC90871 [Homo sapiens]
Length = 112
Score = 191 bits (484), Expect = 6e-49
Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 124 GSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMG 183
GS+LSQPFES I PP TAA PAKPA PATPG+PTSPAEH LL+TCWSC VLSGL LMG
Sbjct: 2 GSRLSQPFESY-ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
Query: 184 AGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
AGGYVYWVA+KPMKMGYPP PWTI +MV+GLSIA WGI+VMADPK KAY +V
Sbjct: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 37.7 bits (86), Expect = 0.009
Identities = 42/130 (32%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 36 TQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQT 95
+Q +A P +PQ PP P AP QPP P A AT Q P+ +LQ+
Sbjct: 16 SQPPQAPPQAQPQPPPPPPPAAP--QPPQP-----PTAAATPQ--------PQYVTELQS 60
Query: 96 GQSHSLPLG----MVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPA-KPA 150
Q + P G V LP V A Q TG+ P I V A+ A +
Sbjct: 61 PQPQAQPPGGQKQYVTELPAV----PAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETV 116
Query: 151 TPATPGSPTS 160
+ A+PGS S
Sbjct: 117 SEASPGSTAS 126
>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
Length = 575
Score = 36.6 bits (83), Expect = 0.019
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 48 QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMV- 106
+G+P + H+ P P+R H+ R Q MT + P + + + +S P+G
Sbjct: 277 EGSPARSSTPLHS--PSPIRVHTVVDRP-QQPMTHRETAPVSQPENKP-ESKPGPVGPEL 332
Query: 107 --GALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSP 161
G +P ++E + + + P E +++ VPP A VP P +P P+SP
Sbjct: 333 PPGHIPIQVIRKEVDSKPVSQKPPPPSEKVEVKVPP--APVPCPPPSPGPSAVPSSP 387
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 35.0 bits (79), Expect = 0.056
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 40 EAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSH 99
++VP C Q P+P +P Q P P+ S +A +N +Q +P L + S
Sbjct: 189 KSVPVCESQKLAPVP--SPEPQKPAPVSPESVKATLSNPKPQKQSHFPET-LGPPSASSP 245
Query: 100 SLPLGMVGALP-------GVFSKREAEFQNTGSQLSQPFESLKIAVP-PDTAAVPAKPAT 151
P+ P S++ A + + P ES + P P + P +PA
Sbjct: 246 ESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAP 305
Query: 152 PATPGS 157
+PGS
Sbjct: 306 AVSPGS 311
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 34.7 bits (78), Expect = 0.073
Identities = 39/133 (29%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 29 DRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPR 88
D VT +T + PY P G P P++QPP R ++ T MTR P
Sbjct: 2188 DLFVTPVTNQRHSDPYAHPPGTPRPGISVPYSQPPATPRPRISEG-FTRSSMTRPVLMPN 2246
Query: 89 NHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNT----GSQLSQPFESLKIAVPPDTAA 144
LQ Q+ ALPG + T G LS F V P A
Sbjct: 2247 QDPFLQAAQNRG------PALPGPLVRPPDTCSQTPRPPGPGLSDTFS----RVSPSAAR 2296
Query: 145 VPAKPATPATPGS 157
P +P TP S
Sbjct: 2297 DP-YDQSPMTPRS 2308
Score = 27.7 bits (60), Expect = 8.9
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 16/97 (16%)
Query: 46 RPQGAPPLPT-----------LAPHTQPPGPLRDHSAQARAT-----NQVMTRQRDWPRN 89
RP G+PP PT L P PPG + D++ + T N V ++
Sbjct: 2933 RPSGSPPPPTLPASPSNHVSSLPPFIAPPGRVLDNAMNSNVTVVSRVNHVFSQGVQVNPG 2992
Query: 90 HLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQ 126
+ Q+ +HSL G G + + +G Q
Sbjct: 2993 LIPGQSTVNHSLGTGKPATQTGPQTSQSGTSSMSGPQ 3029
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 33.9 bits (76), Expect = 0.12
Identities = 51/187 (27%), Positives = 68/187 (36%), Gaps = 42/187 (22%)
Query: 3 PFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPL--------P 54
P AG DP+ L PC PT G R + L ++ P P P P
Sbjct: 363 PQAG--DPAGPTKGLKCPCLPTRRGHSR--SALQKNRLHCPTEGPTNQTPYIKGTEGNGP 418
Query: 55 TLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------SHSL 101
L P +PP PL +A A + D +L GQ ++S+
Sbjct: 419 GLGPQEEPPAPLTSQPERAGAGG---SHGPDQLTGNLLCAPGQVQAAAMAPTSSQETYSV 475
Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPP----DTAAVP-----AKPATP 152
P G GA Q TG+ L P + AV P +T +VP ++ A
Sbjct: 476 PWGRAGA-----GGSRGPDQLTGNLLCAPGQVPAAAVAPTSSQETYSVPQGRSSSQRARG 530
Query: 153 ATPGSPT 159
TP SPT
Sbjct: 531 KTPSSPT 537
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 33.9 bits (76), Expect = 0.12
Identities = 51/187 (27%), Positives = 68/187 (36%), Gaps = 42/187 (22%)
Query: 3 PFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPL--------P 54
P AG DP+ L PC PT G R + L ++ P P P P
Sbjct: 363 PQAG--DPAGPTKGLKCPCLPTRRGHSR--SALQKNRLHCPTEGPTNQTPYIKGTEGNGP 418
Query: 55 TLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------SHSL 101
L P +PP PL +A A + D +L GQ ++S+
Sbjct: 419 GLGPQEEPPAPLTSQPERAGAGG---SHGPDQLTGNLLCAPGQVQAAAMAPTSSQETYSV 475
Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPP----DTAAVP-----AKPATP 152
P G GA Q TG+ L P + AV P +T +VP ++ A
Sbjct: 476 PWGRAGA-----GGSRGPDQLTGNLLCAPGQVPAAAVAPTSSQETYSVPQGRSSSQRARG 530
Query: 153 ATPGSPT 159
TP SPT
Sbjct: 531 KTPSSPT 537
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 33.9 bits (76), Expect = 0.12
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 110 PGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEH 164
P VFS +A NT SQ Q F + A PP +AA + A PA PG PA H
Sbjct: 30 PVVFSTPQATQMNTPSQPRQHFYPSR-AQPPSSAASRVQSAAPARPG----PAAH 79
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 33.9 bits (76), Expect = 0.12
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 110 PGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEH 164
P VFS +A NT SQ Q F + A PP +AA + A PA PG PA H
Sbjct: 30 PVVFSTPQATQMNTPSQPRQHFYPSR-AQPPSSAASRVQSAAPARPG----PAAH 79
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 33.5 bits (75), Expect = 0.16
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 27/155 (17%)
Query: 35 LTQDAEAVPYCR----PQGA--PPLPTLAPHTQ-----PPGPLRDHSA------------ 71
+ Q+ PY + PQGA P +P +P P P+++ ++
Sbjct: 1 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ 60
Query: 72 --QARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQLSQ 129
Q + Q +Q+ + Q Q Q V A S + Q T Q Q
Sbjct: 61 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ 120
Query: 130 PFES--LKIAVPPDTAAVPAKPATPATPGSPTSPA 162
F S L A P T + P TP TP +P +PA
Sbjct: 121 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPA 155
>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
Length = 323
Score = 33.5 bits (75), Expect = 0.16
Identities = 36/163 (22%), Positives = 55/163 (33%), Gaps = 11/163 (6%)
Query: 1 MDPFAGNADPSWTQGTL---GPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLA 57
+D FA S + G + PP G G A+P P G +P L
Sbjct: 8 LDYFAAECLVSMSAGAVVHRRPPDPEGAGGAAGSEVGAAHPESALPGPGPSGPASVPQL- 66
Query: 58 PHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKRE 117
P P P +A V R +G++ G +P
Sbjct: 67 PQVPAPSPGAGGAAPHLLAASVWADLRGSSGEGSWENSGEAPRASSGFSDPIP------- 119
Query: 118 AEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTS 160
Q S+L+ + + P ++ PA P+ PA PG+P +
Sbjct: 120 CSVQTPCSELAPASGAAAVCAPESSSDAPAVPSAPAAPGAPAA 162
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 33.5 bits (75), Expect = 0.16
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 17 LGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQ--PPGPLRDHSAQAR 74
+ PPC + G T +A C P P T P P HS +
Sbjct: 1622 VSPPCPRLSHSTPGKSRGQTYICQA---CTPTHGPSSTPSPFQTDGVPWTPSPKHSG--K 1676
Query: 75 ATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGA-LPGVFSKREAEFQNTGSQLS 128
T ++ +DWPR + G S G VGA LPG S E+E ++ G +LS
Sbjct: 1677 TTPDII---KDWPRRKRAVGCGAGSSSGRGEVGADLPGSLSLLESEGKDHGLELS 1728
>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
Length = 1372
Score = 33.1 bits (74), Expect = 0.21
Identities = 48/196 (24%), Positives = 66/196 (33%), Gaps = 33/196 (16%)
Query: 10 PSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLR-- 67
P W G G PT G ++ L + + + QG P P T PPGP R
Sbjct: 941 PGWFSGLGGS--QPTASGSWEGLSELPTHGYKLRH-QTQGRPR----PPRTTPPGPGRPS 993
Query: 68 ----------------DHSAQARATNQVMTRQRDWPRNHLQLQTGQSHS-LPLGMVGALP 110
D + + +V+ +PR ++ G S + LP
Sbjct: 994 MPAPGTRQENGMATRLDEGLEDFFSRRVLEESSSYPRTLRTVRPGLSEAPLPPLQKKRRR 1053
Query: 111 GVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETC 170
G+F R P L + PP P T +P SP P+ + C
Sbjct: 1054 GLFHFRRPRSFKGDRGPGSPTTGLLLPPPPPP------PPTQESPPSPDPPSLGNNSSPC 1107
Query: 171 WSCHVLSGLRLMGAGG 186
WS S L L G GG
Sbjct: 1108 WSPEEESSL-LPGFGG 1122
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 32.7 bits (73), Expect = 0.28
Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
Query: 52 PLPTLAP---HTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGA 108
P P LAP T P P+ +T + P + S +L LG G
Sbjct: 1651 PTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLG---GSSPSQTLSLG-TGN 1706
Query: 109 LPGVFSKREAEFQNTGSQLSQPFESLKIAVPPD---TAAVPAKPATPATPGSPTSPAEHH 165
G F + S + P ++L +A P T + PA P P SP PA H
Sbjct: 1707 PQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAH 1766
Query: 166 LL 167
L
Sbjct: 1767 TL 1768
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 32.3 bits (72), Expect = 0.36
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 20/109 (18%)
Query: 43 PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHS-L 101
P PQGAPP AP PG RAT R+ P L + + S
Sbjct: 27 PLLGPQGAPPFLEEAPSASLPG-------AERATPPT----REEPGKGLTAEAAREQSGS 75
Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPA 150
P G PG + AE++ G + P P + PAKPA
Sbjct: 76 PCRAAGVSPGTGGREGAEWRAGGREGPGP--------SPSPSPSPAKPA 116
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 32.3 bits (72), Expect = 0.36
Identities = 44/161 (27%), Positives = 58/161 (36%), Gaps = 31/161 (19%)
Query: 11 SWTQGT-LGPPCHPTLEGQDRRVTGLT-----QDAEAVPYCRPQGAPPL--------PTL 56
+W +GT L +E +R T L Q PY Q +PPL P
Sbjct: 580 AWKRGTQLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPP 639
Query: 57 APHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKR 116
P PP PL SA + + M + +LQ HS GAL +
Sbjct: 640 PPPPPPPPPLPSQSAPSAGSAAPMFVKYS---TITRLQNASQHS------GALFKPPTPP 690
Query: 117 EAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGS 157
+ Q+ Q+ P + VPP P P P TPGS
Sbjct: 691 VMQSQSVKPQILVPPNGV---VPP-----PPPPPPPPTPGS 723
>gi|157041215 SPR1 protein [Homo sapiens]
Length = 136
Score = 32.0 bits (71), Expect = 0.47
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 15 GTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRD 68
G+ G P HP E ++ + VP GAPPL P T+P P RD
Sbjct: 22 GSEGHPSHPPAEDREEAGSPTLPQGPPVPGDPWPGAPPLFEDPPPTRPSRPWRD 75
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 31.6 bits (70), Expect = 0.62
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 29 DRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQV 79
D T L + +P PQ P +P P + PP P R+ + A AT+QV
Sbjct: 87 DSNATAL--ELPGLPLSLPQ--PSIPAAVPQSAPPEPHREETVTATATSQV 133
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 31.6 bits (70), Expect = 0.62
Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 25/169 (14%)
Query: 7 NADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPL 66
++ PS+T T+ H T+ +T AE P L T P T L
Sbjct: 177 HSTPSFTSSTI----HSTVSSSTTAITSPFTTAETGVTSTPSSPSSLSTDIPTTS----L 228
Query: 67 RDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQ 126
R + + +T+ +T D P + S P+ ++ + P + S + T S
Sbjct: 229 RTLTPLSLSTSTSLTTTTDLPSIPTDIS---SLPTPIHIISSSPSIQSTETSSLVGTTSP 285
Query: 127 LSQPFE--------------SLKIAVPPDTAAVPAKPATPATPGSPTSP 161
S I V P+T A P + G+ TSP
Sbjct: 286 TMSTVRATLRSTENTPISSFSTSIVVTPETPTTQAPPVLMSATGTQTSP 334
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 31.6 bits (70), Expect = 0.62
Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 14/101 (13%)
Query: 43 PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLP 102
P RP APP P PGP A + P LQLQ QS P
Sbjct: 283 PGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQ------------PSPVLQLQQKQSRISP 330
Query: 103 LGMVGALPGV--FSKREAEFQNTGSQLSQPFESLKIAVPPD 141
+ L V +RE Q + Q E+L ++PPD
Sbjct: 331 IQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPD 371
Score = 27.7 bits (60), Expect = 8.9
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 4/113 (3%)
Query: 48 QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-SHSLPLGMV 106
QG LP L Q + Q + Q +Q P+ Q Q +++ P G
Sbjct: 207 QGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPG 266
Query: 107 GALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPT 159
L G + ++ G + P + A P AAVP PG P+
Sbjct: 267 PELSGPSTPQKLPVPAPGGR---PSPAPPAAAQPPAAAVPGPSVPQPAPGQPS 316
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 31.6 bits (70), Expect = 0.62
Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 14/101 (13%)
Query: 43 PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLP 102
P RP APP P PGP A + P LQLQ QS P
Sbjct: 283 PGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQ------------PSPVLQLQQKQSRISP 330
Query: 103 LGMVGALPGV--FSKREAEFQNTGSQLSQPFESLKIAVPPD 141
+ L V +RE Q + Q E+L ++PPD
Sbjct: 331 IQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPD 371
Score = 27.7 bits (60), Expect = 8.9
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 4/113 (3%)
Query: 48 QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-SHSLPLGMV 106
QG LP L Q + Q + Q +Q P+ Q Q +++ P G
Sbjct: 207 QGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPG 266
Query: 107 GALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPT 159
L G + ++ G + P + A P AAVP PG P+
Sbjct: 267 PELSGPSTPQKLPVPAPGGR---PSPAPPAAAQPPAAAVPGPSVPQPAPGQPS 316
>gi|31982899 seven in absentia homolog 2 [Homo sapiens]
Length = 324
Score = 31.6 bits (70), Expect = 0.62
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPG-----SPTSPAEHHLLETCWSCHV 175
Q+T S + P + A P ++AVPA A + PG P SP +HH L + + C V
Sbjct: 24 QHTPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGGGGGAGPVSP-QHHELTSLFECPV 82
>gi|33350928 disabled homolog 1 [Homo sapiens]
Length = 555
Score = 31.6 bits (70), Expect = 0.62
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 136 IAVPPDTAAVPAKPATPATPG-------SPTSPAEHHLLETC--WSCHVLSGLRLMGAGG 186
++ PPD + P TPATPG S T PA + + + V SG MGA
Sbjct: 252 MSTPPDITS----PPTPATPGDAFIPSSSQTLPASADVFSSVPFGTAAVPSGYVAMGAVL 307
Query: 187 YVYW----VAQKPMKMGYPPGPWTIMKMVMGLSIAAWG 220
+W + Q+ M MG P + +++ G AWG
Sbjct: 308 PSFWGQQPLVQQQMVMGAQP---PVAQVMPGAQPIAWG 342
>gi|21314684 single stranded DNA binding protein 3 isoform b [Homo
sapiens]
Length = 368
Score = 31.6 bits (70), Expect = 0.62
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 26/132 (19%)
Query: 43 PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQV-MTRQRDWPRNHLQLQTGQSHSL 101
P+ +P P + PH+QPPG + Q N + TRQ+ P + Q +
Sbjct: 131 PHAQPPPHNPSSMMGPHSQPPGGV--PGTQPLLPNSMDPTRQQGHPNMGGSM---QRMNP 185
Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVP------------PDTAAVPAKP 149
P GM PG QN GS + P SL A+P P+ + + P
Sbjct: 186 PRGMGPMGPGP--------QNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIP 237
Query: 150 ATPATPGSPTSP 161
+ ++PG+ P
Sbjct: 238 YSSSSPGTYVGP 249
>gi|221219024 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 31.2 bits (69), Expect = 0.81
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 26/148 (17%)
Query: 36 TQDAEAVPYCRPQGAPPLPTLAPH-------------TQP-----PGPLRDHSAQARATN 77
T A A P+ P PPLP A T P GPL S + +++
Sbjct: 936 TGPAAASPHSSP---PPLPAKASRQLQVYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSS 992
Query: 78 QVMTR---QRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQLSQPFESL 134
Q+ + P++ L Q G SLP + L + +KR+ Q G Q+ + +
Sbjct: 993 QLSVATLGRSPSPKSALLTQNGTG-SLPRNLAATLQDIETKRQLALQQKGQQVIEE-QRR 1050
Query: 135 KIAVPPDTAAVPAKPATPATPGSPTSPA 162
++A AA A+ A G+ PA
Sbjct: 1051 RLAELKQKAAAEAQCQWDALHGAAPFPA 1078
>gi|38424073 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 31.2 bits (69), Expect = 0.81
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 26/148 (17%)
Query: 36 TQDAEAVPYCRPQGAPPLPTLAPH-------------TQP-----PGPLRDHSAQARATN 77
T A A P+ P PPLP A T P GPL S + +++
Sbjct: 936 TGPAAASPHSSP---PPLPAKASRQLQVYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSS 992
Query: 78 QVMTR---QRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQLSQPFESL 134
Q+ + P++ L Q G SLP + L + +KR+ Q G Q+ + +
Sbjct: 993 QLSVATLGRSPSPKSALLTQNGTG-SLPRNLAATLQDIETKRQLALQQKGQQVIEE-QRR 1050
Query: 135 KIAVPPDTAAVPAKPATPATPGSPTSPA 162
++A AA A+ A G+ PA
Sbjct: 1051 RLAELKQKAAAEAQCQWDALHGAAPFPA 1078
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 31.2 bits (69), Expect = 0.81
Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 19/77 (24%)
Query: 139 PPDTAAVPAKPATPATPGSPTSPAEHHLLETC-----------WSCHVLSGLRLMGAGGY 187
PP P P PGSP SP + E+C S V SG+ + G GY
Sbjct: 113 PPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGY 172
Query: 188 VYWVAQKPMKMGYPPGP 204
P G PPGP
Sbjct: 173 -------PGPAG-PPGP 181
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,295,247
Number of Sequences: 37866
Number of extensions: 675680
Number of successful extensions: 5582
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 5011
Number of HSP's gapped (non-prelim): 720
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.