Guide to the Human Genome
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Search of human proteins with 239756245

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]
         (235 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]           500   e-142
gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo ...   495   e-140
gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo ...   446   e-126
gi|62955829 hypothetical protein LOC90871 [Homo sapiens]              191   6e-49
gi|238859557 regulatory factor X1 [Homo sapiens]                       38   0.009
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]                37   0.019
gi|41281612 zinc finger protein 828 [Homo sapiens]                     35   0.056
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    35   0.073
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ...    34   0.12 
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ...    34   0.12 
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ...    34   0.12 
gi|4507379 TATA box binding protein [Homo sapiens]                     33   0.16 
gi|20162554 Kruppel-like factor 14 [Homo sapiens]                      33   0.16 
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]               33   0.16 
gi|156938257 leucine rich repeat containing 16B [Homo sapiens]         33   0.21 
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         33   0.28 
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]         32   0.36 
gi|47132519 Ras association and pleckstrin homology domains 1 is...    32   0.36 
gi|157041215 SPR1 protein [Homo sapiens]                               32   0.47 
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]      32   0.62 
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti...    32   0.62 
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    32   0.62 
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    32   0.62 
gi|31982899 seven in absentia homolog 2 [Homo sapiens]                 32   0.62 
gi|33350928 disabled homolog 1 [Homo sapiens]                          32   0.62 
gi|21314684 single stranded DNA binding protein 3 isoform b [Hom...    32   0.62 
gi|221219024 pleckstrin homology-like domain, family B, member 1...    31   0.81 
gi|38424073 pleckstrin homology-like domain, family B, member 1 ...    31   0.81 
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      31   0.81 

>gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score =  500 bits (1288), Expect = e-142
 Identities = 235/235 (100%), Positives = 235/235 (100%)

Query: 1   MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
           MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1   MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60

Query: 61  QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
           QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF
Sbjct: 61  QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120

Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
           QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180

Query: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
           LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235


>gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo
           sapiens]
          Length = 235

 Score =  495 bits (1274), Expect = e-140
 Identities = 234/235 (99%), Positives = 234/235 (99%)

Query: 1   MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
           MDPFAGNADPS TQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1   MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60

Query: 61  QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
           QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF
Sbjct: 61  QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120

Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
           QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180

Query: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
           LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235


>gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo
           sapiens]
          Length = 216

 Score =  446 bits (1147), Expect = e-126
 Identities = 215/235 (91%), Positives = 215/235 (91%), Gaps = 19/235 (8%)

Query: 1   MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
           MDPFAGNADPS TQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1   MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60

Query: 61  QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
           QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ                   EAEF
Sbjct: 61  QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------------EAEF 101

Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
           QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 102 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 161

Query: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
           LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 162 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216


>gi|62955829 hypothetical protein LOC90871 [Homo sapiens]
          Length = 112

 Score =  191 bits (484), Expect = 6e-49
 Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 1/112 (0%)

Query: 124 GSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMG 183
           GS+LSQPFES  I  PP TAA PAKPA PATPG+PTSPAEH LL+TCWSC VLSGL LMG
Sbjct: 2   GSRLSQPFESY-ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60

Query: 184 AGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
           AGGYVYWVA+KPMKMGYPP PWTI +MV+GLSIA WGI+VMADPK KAY +V
Sbjct: 61  AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112


>gi|238859557 regulatory factor X1 [Homo sapiens]
          Length = 979

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 42/130 (32%), Positives = 54/130 (41%), Gaps = 24/130 (18%)

Query: 36  TQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQT 95
           +Q  +A P  +PQ  PP P  AP  QPP P       A AT Q        P+   +LQ+
Sbjct: 16  SQPPQAPPQAQPQPPPPPPPAAP--QPPQP-----PTAAATPQ--------PQYVTELQS 60

Query: 96  GQSHSLPLG----MVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPA-KPA 150
            Q  + P G     V  LP V     A  Q TG+    P     I V     A+ A +  
Sbjct: 61  PQPQAQPPGGQKQYVTELPAV----PAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETV 116

Query: 151 TPATPGSPTS 160
           + A+PGS  S
Sbjct: 117 SEASPGSTAS 126


>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
          Length = 575

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 48  QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMV- 106
           +G+P   +   H+  P P+R H+   R   Q MT +   P +  + +  +S   P+G   
Sbjct: 277 EGSPARSSTPLHS--PSPIRVHTVVDRP-QQPMTHRETAPVSQPENKP-ESKPGPVGPEL 332

Query: 107 --GALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSP 161
             G +P    ++E + +    +   P E +++ VPP  A VP  P +P     P+SP
Sbjct: 333 PPGHIPIQVIRKEVDSKPVSQKPPPPSEKVEVKVPP--APVPCPPPSPGPSAVPSSP 387


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 11/126 (8%)

Query: 40  EAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSH 99
           ++VP C  Q   P+P  +P  Q P P+   S +A  +N    +Q  +P   L   +  S 
Sbjct: 189 KSVPVCESQKLAPVP--SPEPQKPAPVSPESVKATLSNPKPQKQSHFPET-LGPPSASSP 245

Query: 100 SLPLGMVGALP-------GVFSKREAEFQNTGSQLSQPFESLKIAVP-PDTAAVPAKPAT 151
             P+      P          S++ A   +   +   P ES +   P P  +  P +PA 
Sbjct: 246 ESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAP 305

Query: 152 PATPGS 157
             +PGS
Sbjct: 306 AVSPGS 311


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 34.7 bits (78), Expect = 0.073
 Identities = 39/133 (29%), Positives = 48/133 (36%), Gaps = 16/133 (12%)

Query: 29   DRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPR 88
            D  VT +T    + PY  P G P      P++QPP   R   ++   T   MTR    P 
Sbjct: 2188 DLFVTPVTNQRHSDPYAHPPGTPRPGISVPYSQPPATPRPRISEG-FTRSSMTRPVLMPN 2246

Query: 89   NHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNT----GSQLSQPFESLKIAVPPDTAA 144
                LQ  Q+         ALPG   +       T    G  LS  F      V P  A 
Sbjct: 2247 QDPFLQAAQNRG------PALPGPLVRPPDTCSQTPRPPGPGLSDTFS----RVSPSAAR 2296

Query: 145  VPAKPATPATPGS 157
             P    +P TP S
Sbjct: 2297 DP-YDQSPMTPRS 2308



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 16/97 (16%)

Query: 46   RPQGAPPLPT-----------LAPHTQPPGPLRDHSAQARAT-----NQVMTRQRDWPRN 89
            RP G+PP PT           L P   PPG + D++  +  T     N V ++       
Sbjct: 2933 RPSGSPPPPTLPASPSNHVSSLPPFIAPPGRVLDNAMNSNVTVVSRVNHVFSQGVQVNPG 2992

Query: 90   HLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQ 126
             +  Q+  +HSL  G      G  + +      +G Q
Sbjct: 2993 LIPGQSTVNHSLGTGKPATQTGPQTSQSGTSSMSGPQ 3029


>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 864

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 51/187 (27%), Positives = 68/187 (36%), Gaps = 42/187 (22%)

Query: 3   PFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPL--------P 54
           P AG  DP+     L  PC PT  G  R  + L ++    P   P    P         P
Sbjct: 363 PQAG--DPAGPTKGLKCPCLPTRRGHSR--SALQKNRLHCPTEGPTNQTPYIKGTEGNGP 418

Query: 55  TLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------SHSL 101
            L P  +PP PL     +A A     +   D    +L    GQ             ++S+
Sbjct: 419 GLGPQEEPPAPLTSQPERAGAGG---SHGPDQLTGNLLCAPGQVQAAAMAPTSSQETYSV 475

Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPP----DTAAVP-----AKPATP 152
           P G  GA            Q TG+ L  P +    AV P    +T +VP     ++ A  
Sbjct: 476 PWGRAGA-----GGSRGPDQLTGNLLCAPGQVPAAAVAPTSSQETYSVPQGRSSSQRARG 530

Query: 153 ATPGSPT 159
            TP SPT
Sbjct: 531 KTPSSPT 537


>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
           sapiens]
          Length = 894

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 51/187 (27%), Positives = 68/187 (36%), Gaps = 42/187 (22%)

Query: 3   PFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPL--------P 54
           P AG  DP+     L  PC PT  G  R  + L ++    P   P    P         P
Sbjct: 363 PQAG--DPAGPTKGLKCPCLPTRRGHSR--SALQKNRLHCPTEGPTNQTPYIKGTEGNGP 418

Query: 55  TLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------SHSL 101
            L P  +PP PL     +A A     +   D    +L    GQ             ++S+
Sbjct: 419 GLGPQEEPPAPLTSQPERAGAGG---SHGPDQLTGNLLCAPGQVQAAAMAPTSSQETYSV 475

Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPP----DTAAVP-----AKPATP 152
           P G  GA            Q TG+ L  P +    AV P    +T +VP     ++ A  
Sbjct: 476 PWGRAGA-----GGSRGPDQLTGNLLCAPGQVPAAAVAPTSSQETYSVPQGRSSSQRARG 530

Query: 153 ATPGSPT 159
            TP SPT
Sbjct: 531 KTPSSPT 537


>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 110 PGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEH 164
           P VFS  +A   NT SQ  Q F   + A PP +AA   + A PA PG    PA H
Sbjct: 30  PVVFSTPQATQMNTPSQPRQHFYPSR-AQPPSSAASRVQSAAPARPG----PAAH 79


>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 110 PGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEH 164
           P VFS  +A   NT SQ  Q F   + A PP +AA   + A PA PG    PA H
Sbjct: 30  PVVFSTPQATQMNTPSQPRQHFYPSR-AQPPSSAASRVQSAAPARPG----PAAH 79


>gi|4507379 TATA box binding protein [Homo sapiens]
          Length = 339

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 27/155 (17%)

Query: 35  LTQDAEAVPYCR----PQGA--PPLPTLAPHTQ-----PPGPLRDHSA------------ 71
           + Q+    PY +    PQGA  P +P  +P         P P+++ ++            
Sbjct: 1   MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ 60

Query: 72  --QARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQLSQ 129
             Q +   Q   +Q+   +   Q Q  Q        V A     S  +   Q T  Q  Q
Sbjct: 61  QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ 120

Query: 130 PFES--LKIAVPPDTAAVPAKPATPATPGSPTSPA 162
            F S  L  A  P T  +   P TP TP +P +PA
Sbjct: 121 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPA 155


>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
          Length = 323

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 36/163 (22%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 1   MDPFAGNADPSWTQGTL---GPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLA 57
           +D FA     S + G +    PP      G      G      A+P   P G   +P L 
Sbjct: 8   LDYFAAECLVSMSAGAVVHRRPPDPEGAGGAAGSEVGAAHPESALPGPGPSGPASVPQL- 66

Query: 58  PHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKRE 117
           P    P P    +A       V    R          +G++     G    +P       
Sbjct: 67  PQVPAPSPGAGGAAPHLLAASVWADLRGSSGEGSWENSGEAPRASSGFSDPIP------- 119

Query: 118 AEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTS 160
              Q   S+L+    +  +  P  ++  PA P+ PA PG+P +
Sbjct: 120 CSVQTPCSELAPASGAAAVCAPESSSDAPAVPSAPAAPGAPAA 162


>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
          Length = 1910

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 11/115 (9%)

Query: 17   LGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQ--PPGPLRDHSAQAR 74
            + PPC         +  G T   +A   C P   P        T   P  P   HS   +
Sbjct: 1622 VSPPCPRLSHSTPGKSRGQTYICQA---CTPTHGPSSTPSPFQTDGVPWTPSPKHSG--K 1676

Query: 75   ATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGA-LPGVFSKREAEFQNTGSQLS 128
             T  ++   +DWPR    +  G   S   G VGA LPG  S  E+E ++ G +LS
Sbjct: 1677 TTPDII---KDWPRRKRAVGCGAGSSSGRGEVGADLPGSLSLLESEGKDHGLELS 1728


>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
          Length = 1372

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 48/196 (24%), Positives = 66/196 (33%), Gaps = 33/196 (16%)

Query: 10   PSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLR-- 67
            P W  G  G    PT  G    ++ L      + + + QG P      P T PPGP R  
Sbjct: 941  PGWFSGLGGS--QPTASGSWEGLSELPTHGYKLRH-QTQGRPR----PPRTTPPGPGRPS 993

Query: 68   ----------------DHSAQARATNQVMTRQRDWPRNHLQLQTGQSHS-LPLGMVGALP 110
                            D   +   + +V+     +PR    ++ G S + LP        
Sbjct: 994  MPAPGTRQENGMATRLDEGLEDFFSRRVLEESSSYPRTLRTVRPGLSEAPLPPLQKKRRR 1053

Query: 111  GVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETC 170
            G+F  R             P   L +  PP        P T  +P SP  P+  +    C
Sbjct: 1054 GLFHFRRPRSFKGDRGPGSPTTGLLLPPPPPP------PPTQESPPSPDPPSLGNNSSPC 1107

Query: 171  WSCHVLSGLRLMGAGG 186
            WS    S L L G GG
Sbjct: 1108 WSPEEESSL-LPGFGG 1122


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 10/122 (8%)

Query: 52   PLPTLAP---HTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGA 108
            P P LAP    T  P P+        +T  +       P       +  S +L LG  G 
Sbjct: 1651 PTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLG---GSSPSQTLSLG-TGN 1706

Query: 109  LPGVFSKREAEFQNTGSQLSQPFESLKIAVPPD---TAAVPAKPATPATPGSPTSPAEHH 165
              G F  +        S +  P ++L +A  P    T  +   PA P  P SP  PA  H
Sbjct: 1707 PQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAH 1766

Query: 166  LL 167
             L
Sbjct: 1767 TL 1768


>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
          Length = 566

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 20/109 (18%)

Query: 43  PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHS-L 101
           P   PQGAPP    AP    PG         RAT       R+ P   L  +  +  S  
Sbjct: 27  PLLGPQGAPPFLEEAPSASLPG-------AERATPPT----REEPGKGLTAEAAREQSGS 75

Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPA 150
           P    G  PG   +  AE++  G +   P         P  +  PAKPA
Sbjct: 76  PCRAAGVSPGTGGREGAEWRAGGREGPGP--------SPSPSPSPAKPA 116


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 44/161 (27%), Positives = 58/161 (36%), Gaps = 31/161 (19%)

Query: 11  SWTQGT-LGPPCHPTLEGQDRRVTGLT-----QDAEAVPYCRPQGAPPL--------PTL 56
           +W +GT L       +E  +R  T L      Q     PY   Q +PPL        P  
Sbjct: 580 AWKRGTQLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPP 639

Query: 57  APHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKR 116
            P   PP PL   SA +  +   M  +        +LQ    HS      GAL    +  
Sbjct: 640 PPPPPPPPPLPSQSAPSAGSAAPMFVKYS---TITRLQNASQHS------GALFKPPTPP 690

Query: 117 EAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGS 157
             + Q+   Q+  P   +   VPP     P  P  P TPGS
Sbjct: 691 VMQSQSVKPQILVPPNGV---VPP-----PPPPPPPPTPGS 723


>gi|157041215 SPR1 protein [Homo sapiens]
          Length = 136

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 19/54 (35%), Positives = 24/54 (44%)

Query: 15 GTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRD 68
          G+ G P HP  E ++   +        VP     GAPPL    P T+P  P RD
Sbjct: 22 GSEGHPSHPPAEDREEAGSPTLPQGPPVPGDPWPGAPPLFEDPPPTRPSRPWRD 75


>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
          Length = 2382

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 29  DRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQV 79
           D   T L  +   +P   PQ  P +P   P + PP P R+ +  A AT+QV
Sbjct: 87  DSNATAL--ELPGLPLSLPQ--PSIPAAVPQSAPPEPHREETVTATATSQV 133


>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
           [Homo sapiens]
          Length = 1063

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 25/169 (14%)

Query: 7   NADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPL 66
           ++ PS+T  T+    H T+      +T     AE      P     L T  P T     L
Sbjct: 177 HSTPSFTSSTI----HSTVSSSTTAITSPFTTAETGVTSTPSSPSSLSTDIPTTS----L 228

Query: 67  RDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQ 126
           R  +  + +T+  +T   D P     +    S   P+ ++ + P + S   +    T S 
Sbjct: 229 RTLTPLSLSTSTSLTTTTDLPSIPTDIS---SLPTPIHIISSSPSIQSTETSSLVGTTSP 285

Query: 127 LSQPFE--------------SLKIAVPPDTAAVPAKPATPATPGSPTSP 161
                               S  I V P+T    A P   +  G+ TSP
Sbjct: 286 TMSTVRATLRSTENTPISSFSTSIVVTPETPTTQAPPVLMSATGTQTSP 334


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 14/101 (13%)

Query: 43  PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLP 102
           P  RP  APP     P    PGP     A  +            P   LQLQ  QS   P
Sbjct: 283 PGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQ------------PSPVLQLQQKQSRISP 330

Query: 103 LGMVGALPGV--FSKREAEFQNTGSQLSQPFESLKIAVPPD 141
           +     L  V    +RE   Q   +   Q  E+L  ++PPD
Sbjct: 331 IQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPD 371



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 48  QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-SHSLPLGMV 106
           QG   LP L    Q     +    Q +   Q   +Q   P+   Q Q    +++ P G  
Sbjct: 207 QGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPG 266

Query: 107 GALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPT 159
             L G  + ++      G +   P  +   A  P  AAVP        PG P+
Sbjct: 267 PELSGPSTPQKLPVPAPGGR---PSPAPPAAAQPPAAAVPGPSVPQPAPGQPS 316


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 14/101 (13%)

Query: 43  PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLP 102
           P  RP  APP     P    PGP     A  +            P   LQLQ  QS   P
Sbjct: 283 PGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQ------------PSPVLQLQQKQSRISP 330

Query: 103 LGMVGALPGV--FSKREAEFQNTGSQLSQPFESLKIAVPPD 141
           +     L  V    +RE   Q   +   Q  E+L  ++PPD
Sbjct: 331 IQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPD 371



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 48  QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-SHSLPLGMV 106
           QG   LP L    Q     +    Q +   Q   +Q   P+   Q Q    +++ P G  
Sbjct: 207 QGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPG 266

Query: 107 GALPGVFSKREAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPT 159
             L G  + ++      G +   P  +   A  P  AAVP        PG P+
Sbjct: 267 PELSGPSTPQKLPVPAPGGR---PSPAPPAAAQPPAAAVPGPSVPQPAPGQPS 316


>gi|31982899 seven in absentia homolog 2 [Homo sapiens]
          Length = 324

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPG-----SPTSPAEHHLLETCWSCHV 175
           Q+T S  + P  +   A  P ++AVPA  A  + PG      P SP +HH L + + C V
Sbjct: 24  QHTPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGGGGGAGPVSP-QHHELTSLFECPV 82


>gi|33350928 disabled homolog 1 [Homo sapiens]
          Length = 555

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 20/98 (20%)

Query: 136 IAVPPDTAAVPAKPATPATPG-------SPTSPAEHHLLETC--WSCHVLSGLRLMGAGG 186
           ++ PPD  +    P TPATPG       S T PA   +  +    +  V SG   MGA  
Sbjct: 252 MSTPPDITS----PPTPATPGDAFIPSSSQTLPASADVFSSVPFGTAAVPSGYVAMGAVL 307

Query: 187 YVYW----VAQKPMKMGYPPGPWTIMKMVMGLSIAAWG 220
             +W    + Q+ M MG  P    + +++ G    AWG
Sbjct: 308 PSFWGQQPLVQQQMVMGAQP---PVAQVMPGAQPIAWG 342


>gi|21314684 single stranded DNA binding protein 3 isoform b [Homo
           sapiens]
          Length = 368

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 26/132 (19%)

Query: 43  PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQV-MTRQRDWPRNHLQLQTGQSHSL 101
           P+ +P    P   + PH+QPPG +     Q    N +  TRQ+  P     +   Q  + 
Sbjct: 131 PHAQPPPHNPSSMMGPHSQPPGGV--PGTQPLLPNSMDPTRQQGHPNMGGSM---QRMNP 185

Query: 102 PLGMVGALPGVFSKREAEFQNTGSQLSQPFESLKIAVP------------PDTAAVPAKP 149
           P GM    PG         QN GS +  P  SL  A+P            P+  +  + P
Sbjct: 186 PRGMGPMGPGP--------QNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIP 237

Query: 150 ATPATPGSPTSP 161
            + ++PG+   P
Sbjct: 238 YSSSSPGTYVGP 249


>gi|221219024 pleckstrin homology-like domain, family B, member 1
            isoform a [Homo sapiens]
          Length = 1377

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 26/148 (17%)

Query: 36   TQDAEAVPYCRPQGAPPLPTLAPH-------------TQP-----PGPLRDHSAQARATN 77
            T  A A P+  P   PPLP  A               T P      GPL   S  + +++
Sbjct: 936  TGPAAASPHSSP---PPLPAKASRQLQVYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSS 992

Query: 78   QVMTR---QRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQLSQPFESL 134
            Q+      +   P++ L  Q G   SLP  +   L  + +KR+   Q  G Q+ +  +  
Sbjct: 993  QLSVATLGRSPSPKSALLTQNGTG-SLPRNLAATLQDIETKRQLALQQKGQQVIEE-QRR 1050

Query: 135  KIAVPPDTAAVPAKPATPATPGSPTSPA 162
            ++A     AA  A+    A  G+   PA
Sbjct: 1051 RLAELKQKAAAEAQCQWDALHGAAPFPA 1078


>gi|38424073 pleckstrin homology-like domain, family B, member 1
            isoform a [Homo sapiens]
          Length = 1377

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 26/148 (17%)

Query: 36   TQDAEAVPYCRPQGAPPLPTLAPH-------------TQP-----PGPLRDHSAQARATN 77
            T  A A P+  P   PPLP  A               T P      GPL   S  + +++
Sbjct: 936  TGPAAASPHSSP---PPLPAKASRQLQVYRSKMDGEATSPLPRTRSGPLPSSSGSSSSSS 992

Query: 78   QVMTR---QRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEFQNTGSQLSQPFESL 134
            Q+      +   P++ L  Q G   SLP  +   L  + +KR+   Q  G Q+ +  +  
Sbjct: 993  QLSVATLGRSPSPKSALLTQNGTG-SLPRNLAATLQDIETKRQLALQQKGQQVIEE-QRR 1050

Query: 135  KIAVPPDTAAVPAKPATPATPGSPTSPA 162
            ++A     AA  A+    A  G+   PA
Sbjct: 1051 RLAELKQKAAAEAQCQWDALHGAAPFPA 1078


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 19/77 (24%)

Query: 139 PPDTAAVPAKPATPATPGSPTSPAEHHLLETC-----------WSCHVLSGLRLMGAGGY 187
           PP        P  P  PGSP SP    + E+C            S  V SG+ + G  GY
Sbjct: 113 PPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGY 172

Query: 188 VYWVAQKPMKMGYPPGP 204
                  P   G PPGP
Sbjct: 173 -------PGPAG-PPGP 181


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,295,247
Number of Sequences: 37866
Number of extensions: 675680
Number of successful extensions: 5582
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 5011
Number of HSP's gapped (non-prelim): 720
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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