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Search of human proteins with 239755764
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755764 PREDICTED: hypothetical protein [Homo sapiens]
(1149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755764 PREDICTED: hypothetical protein [Homo sapiens] 2318 0.0
gi|239750268 PREDICTED: hypothetical protein [Homo sapiens] 2312 0.0
gi|239744576 PREDICTED: hypothetical protein XP_002343198 [Homo ... 2312 0.0
gi|148539835 dystroglycan 1 preproprotein [Homo sapiens] 95 3e-19
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 45 3e-04
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 36 0.18
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 34 0.70
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 34 0.70
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 34 0.70
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 34 0.70
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 34 0.91
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 33 2.0
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 33 2.0
gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo sap... 33 2.0
gi|150418007 RAN binding protein 2 [Homo sapiens] 32 2.7
gi|62865614 TAF9 RNA polymerase II, TATA box binding protein-ass... 32 2.7
gi|4507351 TAF9 RNA polymerase II, TATA box binding protein-asso... 32 2.7
gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo sa... 32 2.7
gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo s... 32 2.7
gi|119120894 Dmx-like 2 [Homo sapiens] 32 3.5
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 32 4.5
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 32 4.5
gi|161019170 mucin 5AC [Homo sapiens] 31 5.9
gi|22027471 neuronal PAS domain protein 2 [Homo sapiens] 31 5.9
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 31 5.9
gi|4505683 platelet-derived growth factor receptor beta precurso... 31 7.7
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 31 7.7
gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens] 31 7.7
>gi|239755764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1149
Score = 2318 bits (6008), Expect = 0.0
Identities = 1149/1149 (100%), Positives = 1149/1149 (100%)
Query: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDDIKVRQKSSWSQKLGVKKCVRFSKVISSY 60
MFSENSICTDLKTTEQVKRKKRYDDDDDDDDDIKVRQKSSWSQKLGVKKCVRFSKVISSY
Sbjct: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDDIKVRQKSSWSQKLGVKKCVRFSKVISSY 60
Query: 61 PGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVTTHYSC 120
PGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVTTHYSC
Sbjct: 61 PGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVTTHYSC 120
Query: 121 EEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSPTKTLQ 180
EEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSPTKTLQ
Sbjct: 121 EEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSPTKTLQ 180
Query: 181 GLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRAEGGSK 240
GLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRAEGGSK
Sbjct: 181 GLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRAEGGSK 240
Query: 241 EFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLWNLPVM 300
EFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLWNLPVM
Sbjct: 241 EFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLWNLPVM 300
Query: 301 AEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEGWRLLQ 360
AEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEGWRLLQ
Sbjct: 301 AEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEGWRLLQ 360
Query: 361 KSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQ 420
KSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQ
Sbjct: 361 KSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQ 420
Query: 421 ITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEVTPSMV 480
ITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEVTPSMV
Sbjct: 421 ITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEVTPSMV 480
Query: 481 LMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVSESISQ 540
LMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVSESISQ
Sbjct: 481 LMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVSESISQ 540
Query: 541 AGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSPDSL 600
AGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSPDSL
Sbjct: 541 AGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSPDSL 600
Query: 601 LTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFIIPTEII 660
LTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFIIPTEII
Sbjct: 601 LTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFIIPTEII 660
Query: 661 SAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKETPSFTQ 720
SAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKETPSFTQ
Sbjct: 661 SAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKETPSFTQ 720
Query: 721 LHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVGHTFHF 780
LHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVGHTFHF
Sbjct: 721 LHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVGHTFHF 780
Query: 781 PIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQYSPQE 840
PIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQYSPQE
Sbjct: 781 PIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQYSPQE 840
Query: 841 FILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFAKLTDY 900
FILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFAKLTDY
Sbjct: 841 FILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFAKLTDY 900
Query: 901 LNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPDGNVHP 960
LNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPDGNVHP
Sbjct: 901 LNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPDGNVHP 960
Query: 961 NFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIPALLAT 1020
NFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIPALLAT
Sbjct: 961 NFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIPALLAT 1020
Query: 1021 YQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLWKRLLA 1080
YQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLWKRLLA
Sbjct: 1021 YQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLWKRLLA 1080
Query: 1081 GRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACAQRSPI 1140
GRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACAQRSPI
Sbjct: 1081 GRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACAQRSPI 1140
Query: 1141 ARPSLPSPS 1149
ARPSLPSPS
Sbjct: 1141 ARPSLPSPS 1149
>gi|239750268 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1154
Score = 2312 bits (5992), Expect = 0.0
Identities = 1149/1154 (99%), Positives = 1149/1154 (99%), Gaps = 5/1154 (0%)
Query: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDD-----IKVRQKSSWSQKLGVKKCVRFSK 55
MFSENSICTDLKTTEQVKRKKRYDDDDDDDDD IKVRQKSSWSQKLGVKKCVRFSK
Sbjct: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDDDDDDDIKVRQKSSWSQKLGVKKCVRFSK 60
Query: 56 VISSYPGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVT 115
VISSYPGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVT
Sbjct: 61 VISSYPGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVT 120
Query: 116 THYSCEEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSP 175
THYSCEEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSP
Sbjct: 121 THYSCEEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSP 180
Query: 176 TKTLQGLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRA 235
TKTLQGLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRA
Sbjct: 181 TKTLQGLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRA 240
Query: 236 EGGSKEFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLW 295
EGGSKEFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLW
Sbjct: 241 EGGSKEFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLW 300
Query: 296 NLPVMAEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEG 355
NLPVMAEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEG
Sbjct: 301 NLPVMAEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEG 360
Query: 356 WRLLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC 415
WRLLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC
Sbjct: 361 WRLLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC 420
Query: 416 AALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEV 475
AALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEV
Sbjct: 421 AALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEV 480
Query: 476 TPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVS 535
TPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVS
Sbjct: 481 TPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVS 540
Query: 536 ESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVH 595
ESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVH
Sbjct: 541 ESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVH 600
Query: 596 SPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFII 655
SPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFII
Sbjct: 601 SPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFII 660
Query: 656 PTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKET 715
PTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKET
Sbjct: 661 PTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKET 720
Query: 716 PSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVG 775
PSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVG
Sbjct: 721 PSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVG 780
Query: 776 HTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQ 835
HTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQ
Sbjct: 781 HTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQ 840
Query: 836 YSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFA 895
YSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFA
Sbjct: 841 YSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFA 900
Query: 896 KLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPD 955
KLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPD
Sbjct: 901 KLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPD 960
Query: 956 GNVHPNFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIP 1015
GNVHPNFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIP
Sbjct: 961 GNVHPNFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIP 1020
Query: 1016 ALLATYQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLW 1075
ALLATYQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLW
Sbjct: 1021 ALLATYQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLW 1080
Query: 1076 KRLLAGRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACA 1135
KRLLAGRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACA
Sbjct: 1081 KRLLAGRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACA 1140
Query: 1136 QRSPIARPSLPSPS 1149
QRSPIARPSLPSPS
Sbjct: 1141 QRSPIARPSLPSPS 1154
>gi|239744576 PREDICTED: hypothetical protein XP_002343198 [Homo
sapiens]
Length = 1154
Score = 2312 bits (5992), Expect = 0.0
Identities = 1149/1154 (99%), Positives = 1149/1154 (99%), Gaps = 5/1154 (0%)
Query: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDD-----IKVRQKSSWSQKLGVKKCVRFSK 55
MFSENSICTDLKTTEQVKRKKRYDDDDDDDDD IKVRQKSSWSQKLGVKKCVRFSK
Sbjct: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDDDDDDDIKVRQKSSWSQKLGVKKCVRFSK 60
Query: 56 VISSYPGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVT 115
VISSYPGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVT
Sbjct: 61 VISSYPGRANYTEAMDTGRKSMGADITGTHLPLKWIRRVSAIPYLVLVLTSFFVNMLAVT 120
Query: 116 THYSCEEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSP 175
THYSCEEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSP
Sbjct: 121 THYSCEEIQVHHGVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSP 180
Query: 176 TKTLQGLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRA 235
TKTLQGLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRA
Sbjct: 181 TKTLQGLPLEDEGGNYQIMVLVSGVLCFQQTQTAFIFTLHVLAGNEVRGSLVPSPNGIRA 240
Query: 236 EGGSKEFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLW 295
EGGSKEFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLW
Sbjct: 241 EGGSKEFSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLW 300
Query: 296 NLPVMAEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEG 355
NLPVMAEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEG
Sbjct: 301 NLPVMAEDPRHVITLQGDLVQFHWPMGYKVSTVLPELMQVFQQQASSKYLAQVLGYTIEG 360
Query: 356 WRLLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC 415
WRLLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC
Sbjct: 361 WRLLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC 420
Query: 416 AALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEV 475
AALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEV
Sbjct: 421 AALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEV 480
Query: 476 TPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVS 535
TPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVS
Sbjct: 481 TPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVS 540
Query: 536 ESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVH 595
ESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVH
Sbjct: 541 ESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVH 600
Query: 596 SPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFII 655
SPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFII
Sbjct: 601 SPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSFII 660
Query: 656 PTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKET 715
PTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKET
Sbjct: 661 PTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKET 720
Query: 716 PSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVG 775
PSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVG
Sbjct: 721 PSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVG 780
Query: 776 HTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQ 835
HTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQ
Sbjct: 781 HTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYPLELDFQ 840
Query: 836 YSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFA 895
YSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFA
Sbjct: 841 YSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLRTKNSFYSFIKRRERIGLFFA 900
Query: 896 KLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPD 955
KLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPD
Sbjct: 901 KLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCLVNSSSLKWCPNKEIQEIMFKLRRPD 960
Query: 956 GNVHPNFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIP 1015
GNVHPNFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIP
Sbjct: 961 GNVHPNFVYAMLPEYKIGTVENITYSGICLTLELDNGLIGNSILTSSNTENSPWIRNVIP 1020
Query: 1016 ALLATYQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLW 1075
ALLATYQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLW
Sbjct: 1021 ALLATYQTRHAACKILPYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLW 1080
Query: 1076 KRLLAGRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACA 1135
KRLLAGRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACA
Sbjct: 1081 KRLLAGRGESAHSRECLVPQTGDYAFPDHLLAHRSFPGFLRAGARVRVHTHTRTRARACA 1140
Query: 1136 QRSPIARPSLPSPS 1149
QRSPIARPSLPSPS
Sbjct: 1141 QRSPIARPSLPSPS 1154
>gi|148539835 dystroglycan 1 preproprotein [Homo sapiens]
Length = 895
Score = 95.1 bits (235), Expect = 3e-19
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 17/238 (7%)
Query: 756 QPNTFPTVVNSIQLITATVGHTFHFPIPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESW 815
+PN P + N I + A VG F IP DTFYD ED + L L +K + G +SW
Sbjct: 492 EPNQRPELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSW 551
Query: 816 LQFNMTHQILYGYPLELDFQYSPQEFILCATDSGGLVAQMPLTIELKLPRSSPCHTYTLR 875
+QFN Q++YG P E+ + ATD GGL A E+ + R R
Sbjct: 552 VQFNSNSQLMYGLP--DSSHVGKHEYFMHATDKGGLSAVD--AFEIHVHRRPQGDRAPAR 607
Query: 876 TKNSFYS-----FIKRRERIGLFFAKLTDYLNSSNPEQIVLITLRPGSTIISWYNRALCL 930
K F ++I L KL N I L + GS ++ W N
Sbjct: 608 FKAKFVGDPALVLNDIHKKIAL-VKKLAFAFGDRNCSTITLQNITRGSIVVEWTN----- 661
Query: 931 VNSSSLKWCPNKEIQEIMFKLRRPDGNVHPNFVYAMLPEYKIGTVENITYSGICLTLE 988
N+ L+ CP ++I + ++ DG P F A+ P++K ++ +T SG C L+
Sbjct: 662 -NTLPLEPCPKEQIAGLSRRIAEDDGKPRPAFSNALEPDFKATSI-TVTGSGSCRHLQ 717
Score = 71.6 bits (174), Expect = 4e-12
Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 28/341 (8%)
Query: 128 GVPDTVAIIGKLFSYPISPYAFHGKISQFQVTLVHDVKLPRWLEYHSPTKTLQGLPLEDE 187
G+PD A++G+ F I +V+ LP WL + S + TL+GLPL+ +
Sbjct: 66 GIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKEALPSWLHWDSQSHTLEGLPLDTD 125
Query: 188 GGNYQIMVLVS--GVLCFQQTQTAFIFTLHVLAGNEVRGSLV----PSPNGIRAEGGSKE 241
G + I V + G QT+ +F++ V + V P P + + + +
Sbjct: 126 KGVHYISVSATRLGANGSHIPQTSSVFSIEVYPEDHSELQSVRTASPDPGEVVSSACAAD 185
Query: 242 FSAIIAEITLKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLWNLPVMA 301
+ + L A + ++R+ L++ + + ++ ++ + P +N L+++
Sbjct: 186 EPVTVLTVILDADLTKMTPKQRIDLLHRMRSFSEVELHNMKLVPV---VNNRLFDMSAFM 242
Query: 302 EDPRHVITLQGDLVQFHWPMGYKVS-TVLPELMQVFQQQASSKYLAQVLGYTIEGWRLLQ 360
P + + + W +G ++ +P++ V + A ++ LGY + GW +
Sbjct: 243 AGPGNAKKVVENGALLSWKLGCSLNQNSVPDIHGV-EAPAREGAMSAQLGYPVVGWHIAN 301
Query: 361 K-----SQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLC 415
K + RR + P + +GP T + +P S ++PT + + A P ++
Sbjct: 302 KKPPLPKRVRRQIHATPTPVTAIGPP--TTAIQEPPSRIVPTPTSPAI----APPTETMA 355
Query: 416 AALRQITPIP-DPNFIPNTARSLFQKCTKTKRP-QHTAVSQ 454
+R P+P P T ++ Q T T P Q T VS+
Sbjct: 356 PPVRD--PVPGKPTVTIRTRGAIIQ--TPTLGPIQPTRVSE 392
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 45.4 bits (106), Expect = 3e-04
Identities = 104/455 (22%), Positives = 160/455 (35%), Gaps = 85/455 (18%)
Query: 375 TSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQITPIPDPNF---IP 431
TS++ TE + F+ T+ TH ++P S A + T P F I
Sbjct: 535 TSSIATTETTSHSPPSFTSSSTTTETH----SHSTPGFSSSIATSKTTSTSPPRFTFAIA 590
Query: 432 NTARSLFQK------CTKTKRPQHTAVSQNSLQEM---------SLTTNLEYSAAFAEVT 476
T +L TK H+ S SL SLT+++ S + T
Sbjct: 591 TTKTTLHSTPRFTLAIASTKTTSHSTPSLTSLITTIETTSHCTPSLTSSITTSGTISHST 650
Query: 477 PSMVLMAT-------AFTDFDFLQGRTSTVSMSVENLDS--PEWELKGHTL------IHG 521
PS + T + T F T T S S + S E+ H+ I
Sbjct: 651 PSFTSLITITESTSHSTTSFPSSITTTETTSHSTPSFTSLIATTEIISHSTPSYTSSIAT 710
Query: 522 TEIQKHTI----LPDLVSESI--SQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSM 575
TE H+ +E+I S + A+ + SH + S + +S
Sbjct: 711 TETPSHSTPSFPFSITTTETIPHSTPSLNSAITTTETMSHSIP-------GFASSITTSE 763
Query: 576 TT--FLSKWSGSVPVDWEKSVHSPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQH 633
TT F +++ + S HSP S TAS T A SH PL F+ V+ S +++ Q
Sbjct: 764 TTSPFPPRFTSLITTTKTTS-HSPPSF---TASLTSTEATSHSPLSFTSVIASTKITSQ- 818
Query: 634 LHEHNHTSDTPEVSQQIHSFIIPTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKL 693
TP + T +I+ G S + +S+ D+T + + L
Sbjct: 819 --------STPSL----------TSLITTTGTSSHNTLGLSSSVDTTKTTSHSTASFTSL 860
Query: 694 VDEGSLCDGDV------IIKTQSYSKETPSFTQLHDLSELSLSEVSKFSNAFELPENMGS 747
+ + I T+ S TPSFT E + F++ + +
Sbjct: 861 IATTETTSHNTPGFTSSIATTEITSHSTPSFTSSITTMETTSRSSPSFTSLITITGSTSH 920
Query: 748 KTMMHILSQPNTFPTVVNSIQLITA---TVGHTFH 779
T S T T +S IT+ T TFH
Sbjct: 921 ST-ASFTSSITTTETTSHSTPSITSSVTTAERTFH 954
Score = 42.4 bits (98), Expect = 0.003
Identities = 81/392 (20%), Positives = 148/392 (37%), Gaps = 37/392 (9%)
Query: 375 TSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQITP-----IPDPNF 429
TS++ TE+ + + F+ + T+ T + + ++ + T I
Sbjct: 90 TSSIATTEITSHSTPSFTSSITTTETTSQSSPSFTSLITITGSTSHSTASFTSSITTTET 149
Query: 430 IPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEVTPSMV-LMATAFTD 488
++ RS+ T TKR H++ +S T+++ S + PS L+ T +
Sbjct: 150 TSHSTRSITSSITTTKRTSHSS--------LSYTSSIATSETPSHTVPSFTSLITTTEST 201
Query: 489 FDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQK---HTILPDLVSESISQAGYSQ 545
TS ++ + SP T I T +++ + S+S ++
Sbjct: 202 SHSNPSLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAFTF 261
Query: 546 ALLSLSKYSHFLKPSVMQDIA---MPSEVLSSMTTFLSKWSG---------SVPVDWEKS 593
++ + SH PS IA PS S T+ ++ SV E +
Sbjct: 262 SISTTETNSH-SPPSFTSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTSVITTTEST 320
Query: 594 VHSPDSLLTPTASARETLAASHFPLEFSQVLLSNQL-SQQHLHEHNHTSDTPEVSQQIHS 652
HS S T+S T SH P F+ ++ + + S + + + T S S
Sbjct: 321 SHSTPSF---TSSIATTETTSHTPPSFTSLITTTETPSHSNPSFTSLITATESTSHSPPS 377
Query: 653 F--IIPTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFIS-KLVDEGSLCDGDVIIKTQ 709
F I T I++ I T + + S S P T S + + + +I T+
Sbjct: 378 FTSAIATTGITSHSTPIFTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSSLITATK 437
Query: 710 SYSKETPSFTQLHDLSELSLSEVSKFSNAFEL 741
+ S TPS T L ++ + S F++ +L
Sbjct: 438 TTSHSTPSLTSLITTTKSTPHNASSFTSYSQL 469
Score = 34.3 bits (77), Expect = 0.70
Identities = 87/376 (23%), Positives = 132/376 (35%), Gaps = 59/376 (15%)
Query: 375 TSTMGPTELITKLSKP---FSVLLPTSVTHWMPKDEASPIPSLCAALRQITPIPDPNFIP 431
TS M TE T LS P FS+ + +H P +S I P+ P
Sbjct: 243 TSLMTTTET-TSLSPPAFTFSISTTETNSHSPPSFTSS-----------IATTETPSHSP 290
Query: 432 NTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEVTPSMVLM-ATAFTDFD 490
+ SL T T+ H+ +S S+ +TT S + T S+ T+ T
Sbjct: 291 PSFTSLI---TTTESTSHSPLSFTSV----ITTTESTSHSTPSFTSSIATTETTSHTPPS 343
Query: 491 FLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVSESISQAGYSQ----- 545
F T+T + S N P + +LI TE H+ P + +I+ G +
Sbjct: 344 FTSLITTTETPSHSN---PSFT----SLITATESTSHS--PPSFTSAIATTGITSHSTPI 394
Query: 546 --ALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSPDSLLTP 603
+L++ + + PS I + S +F S + + S S SL+T
Sbjct: 395 FTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSSLITATKTTS--HSTPSLTSLITT 452
Query: 604 TASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQ-QIHSFIIPTEIISA 662
T S AS F SQ H +H+H P+ SQ +
Sbjct: 453 TKSTPHN--ASSF----------TSYSQLHFFDHHHRGHIPQYSQLDFFDHYNRDHLTQF 500
Query: 663 PGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSKETPSFTQLH 722
+ TK +S T L T K + I T++ S PSFT
Sbjct: 501 TSLITTTKTTSHSPPSFTALITST-----KTTSHSTPSFTSSIATTETTSHSPPSFTSSS 555
Query: 723 DLSELSLSEVSKFSNA 738
+E FS++
Sbjct: 556 TTTETHSHSTPGFSSS 571
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.18
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 11/190 (5%)
Query: 591 EKSVHSPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQ- 649
E HSP S T+ T + SH PL F+ V+ + + + + T E +
Sbjct: 113 ETPSHSPPSF---TSLITTTESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETTSHT 169
Query: 650 ---IHSFIIPTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISK-LVDEGSLCDGDVI 705
S I TE S S T + + S S P T + + + +I
Sbjct: 170 PPSFTSLITTTETPSHSNPSF-TSLITATESTSHSPPSFTSAIATTGITSHSTPIFTSLI 228
Query: 706 IKTQSYSKETPSFTQLHDLSELSLSEVSKFSNAFELPENMGSKT--MMHILSQPNTFPTV 763
T S S TPSFT +E FS+ + T + +++ NT +
Sbjct: 229 ATTDSTSHSTPSFTSSITSTETISHSTPSFSSLITATKTTSHSTPSLTSLITTTNTSHST 288
Query: 764 VNSIQLITAT 773
+ L+T+T
Sbjct: 289 PSLTSLVTST 298
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 34.3 bits (77), Expect = 0.70
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 539 SQAGYSQALLSLSKYSHFLKPSVMQ-DIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSP 597
S AG S ++LS Y + P ++ ++A PS+ L + G +P E SP
Sbjct: 5 SPAG-SSSILSDGVYERHMDPLLLPGELASPSQALGA---------GEIPAPSETPWLSP 54
Query: 598 DSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPE 645
D L RE P Q L S QHL E H E
Sbjct: 55 DPLFLEQRRVREAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEE 102
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 34.3 bits (77), Expect = 0.70
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 539 SQAGYSQALLSLSKYSHFLKPSVMQ-DIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSP 597
S AG S ++LS Y + P ++ ++A PS+ L + G +P E SP
Sbjct: 140 SPAG-SSSILSDGVYERHMDPLLLPGELASPSQALGA---------GEIPAPSETPWLSP 189
Query: 598 DSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPE 645
D L RE P Q L S QHL E H E
Sbjct: 190 DPLFLEQRRVREAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEE 237
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 34.3 bits (77), Expect = 0.70
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 539 SQAGYSQALLSLSKYSHFLKPSVMQ-DIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSP 597
S AG S ++LS Y + P ++ ++A PS+ L + G +P E SP
Sbjct: 140 SPAG-SSSILSDGVYERHMDPLLLPGELASPSQALGA---------GEIPAPSETPWLSP 189
Query: 598 DSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPE 645
D L RE P Q L S QHL E H E
Sbjct: 190 DPLFLEQRRVREAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEE 237
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 34.3 bits (77), Expect = 0.70
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 539 SQAGYSQALLSLSKYSHFLKPSVMQ-DIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHSP 597
S AG S ++LS Y + P ++ ++A PS+ L + G +P E SP
Sbjct: 196 SPAG-SSSILSDGVYERHMDPLLLPGELASPSQALGA---------GEIPAPSETPWLSP 245
Query: 598 DSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPE 645
D L RE P Q L S QHL E H E
Sbjct: 246 DPLFLEQRRVREAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEE 293
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 33.9 bits (76), Expect = 0.91
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 1032 PYKGSDPQQTLFYEIQKKSSFCSLTFVPGPAVKTNRGYGPQPLWKRLLAGRGESAHSREC 1091
P S+P L + ++ + C G A + +R G P +RL G +R
Sbjct: 74 PEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL-RGSDPVLRARAL 132
Query: 1092 LVPQTGDYAFPDHLLAHRSFP----GFLR-AGARVRVHTHTRTRARA 1133
+ Q G+YA LL R FP FL+ R R H R R RA
Sbjct: 133 VAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRA 179
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 32.7 bits (73), Expect = 2.0
Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 10/185 (5%)
Query: 436 SLFQKCTKTKRPQHTAVSQNSL-QEMSLTTNLEYSAAFAEVTPSMVLMATAFTDFDFLQG 494
SLF+K TK HT+ S +SL + +S + +L S S + D +L
Sbjct: 1093 SLFRKITKQSNLLHTSRSLSSLNRSLSSSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGA 1152
Query: 495 RTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVSESISQAGYSQALLSLSKYS 554
+ + S + +SP H I + + H + P L + S S + LS +
Sbjct: 1153 SSQSSSPASSTPNSPASSASHH--IRPSTL--HGLSPKLHRQYRSARCKSAGNIPLSPLA 1208
Query: 555 HFLKPSVMQDIAMPSEVLSSMTT---FLSKWSGSVPV--DWEKSVHSPDSLLTPTASARE 609
H P+ +P + S T F +K S PV KS P S L + E
Sbjct: 1209 HTPSPTQASPPPLPGHTVGSSHTTQSFPAKLHSSPPVVRPRPKSAEPPRSPLLKRVQSAE 1268
Query: 610 TLAAS 614
L AS
Sbjct: 1269 KLGAS 1273
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo
sapiens]
Length = 1064
Score = 32.7 bits (73), Expect = 2.0
Identities = 85/454 (18%), Positives = 164/454 (36%), Gaps = 72/454 (15%)
Query: 358 LLQKSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAA 417
+L + ++S T+T P+ L+T L + PTS T + SP ++ +
Sbjct: 530 ILSSTPAPNTEVITSHTTTTTPPSTLVTTLPTAIARSTPTSETTY----PISPTGTVTDS 585
Query: 418 LRQITPIPDPNFIPNTARSL-FQKC---------TKTKRPQHTAVSQNSLQEMSLTTNLE 467
+ +IT +TA +L C T T +T S S T++
Sbjct: 586 MTEITYSTSMTGTWSTATTLPLTSCSLPTIETATTPTTNLGNTTTETTSHSTPSFTSSAI 645
Query: 468 YSAAFAEVTPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKH 527
YS T ++ T F S++S +
Sbjct: 646 YSTVNISTTTISSFPPSSGTMVTFTTMNPSSLSTDIST---------------------- 683
Query: 528 TILPDLVSESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVP 587
T L ++ S+ G+ A L+ S F +V AM + V S + +K ++
Sbjct: 684 TTLKNITQPSVGSTGFLTAATDLT--STF---TVSSSSAMSTSVTPSAPSIQNKEISTLV 738
Query: 588 VDWEKSVHSPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVS 647
+ + LT T + + + P+ +S S + T+DT +S
Sbjct: 739 STTTTTSPTERMTLTSTENTPTSYILTTSPVTYS-------FSPSMSASSDWTTDTESIS 791
Query: 648 QQIHSFIIPTEIISAPGMSINTKFVWNSTSDSTLLPMETDCF-ISKLVDEGSLCDGDVII 706
SAP ++ ++T++STL P T+ F S ++ S
Sbjct: 792 -------------SAPAITSTL----HTTAESTLAPTTTNSFTTSANMEPPSTAVATTGT 834
Query: 707 KTQSYSKETPSF---TQLHDLSELSL-SEVSKFSNAFELPENMGSKTMMHILSQPNTFPT 762
+++ T +F T L +++S S ++ + + +M + M ++ + PT
Sbjct: 835 GQSTFTSSTATFLETTTLTPTTDISTESFMTPMISTTPITSSMTLRNTMTSMTTAASRPT 894
Query: 763 VVNSIQLITATVGHTFHFPIPPDTFYDQEDGNST 796
N++ +T+++ P+P + N+T
Sbjct: 895 TTNTLSSLTSSI--LSSTPVPSTEVITSQTTNTT 926
>gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo
sapiens]
Length = 514
Score = 32.7 bits (73), Expect = 2.0
Identities = 79/421 (18%), Positives = 150/421 (35%), Gaps = 61/421 (14%)
Query: 371 SSIPTSTMGP-TELITK------LSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQITP 423
SSI +ST+ P T++IT S P LPT++T P E +
Sbjct: 86 SSILSSTLVPSTDMITSHTTNLTRSSPLLATLPTTITRSTPTSETT-------------- 131
Query: 424 IPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNLEYSAAFAEVTPSMVLMA 483
P + S + T + R + S++ T+ TP+ L+
Sbjct: 132 ------YPTSPTSTVKGSTTSIRYSTSMTGTLSMETSLPPTSSSLPTTETATTPTTNLVT 185
Query: 484 TAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTEIQKHTILPDLVSESI----- 538
T T +ST+ +V +P + GT + T+ P +S I
Sbjct: 186 TEITSHSTPSFSSSTIHSTV---STPTTVISSGPPTSGTIVTSITVTPSSLSTDIPLTTP 242
Query: 539 -----SQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKS 593
G +++LL+ + + +V AM + + S + + + S+ +
Sbjct: 243 TTITHHSVGSTESLLTATDLTSTF--TVSSSSAMSTSDIPSSPSIQNTETSSLVSMTSAT 300
Query: 594 VHSPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEVSQQIHSF 653
+ S T T + + + FP +S + S H TS P + +H
Sbjct: 301 IPSVRPTFTSTHNTLTSSLLTTFPGTYSFSSSMSASSDGTTHTETITS-LPASTSTLH-- 357
Query: 654 IIPTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEGSLCDGDVIIKTQSYSK 713
T S + T F ++T +S S V S T +++
Sbjct: 358 ---TTAESTTAHTTTTSFTTSTTMESP----------SSSVATTSTGQTTFSSSTATFT- 403
Query: 714 ETPSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITAT 773
ET + T D SE +L+ + ++ + ++ + ++ ++PT N++ +T
Sbjct: 404 ETTTLTPTTDFSEETLT--TAMTSTPPITSSITPTNTVTSMTTMTSWPTATNTLSSLTTN 461
Query: 774 V 774
+
Sbjct: 462 I 462
Score = 31.6 bits (70), Expect = 4.5
Identities = 59/339 (17%), Positives = 121/339 (35%), Gaps = 18/339 (5%)
Query: 404 PKDEASPIPSLCAALRQITPIPDPNFIPNTARSLFQKCTKTKRPQHTAVSQNSLQEMSLT 463
P +PI S +T + P T S + T + + ++ S T
Sbjct: 45 PMTSTTPITSAITPTNTVTSMTTMTSPPTTTNSNSTLSSLTSSILSSTLVPSTDMITSHT 104
Query: 464 TNLEYSAAFAEVTPSMVLMATAFTDFDFLQGRTSTVSMSVENLDSPEWELKGHTLIHGTE 523
TNL S+ P+ + +T ++ + TSTV S + ++ T + GT
Sbjct: 105 TNLTRSSPLLATLPTTITRSTPTSETTYPTSPTSTVKGSTTS-------IRYSTSMTGTL 157
Query: 524 IQKHTILPDLVSESISQAGYSQA--LLSLSKYSH----FLKPSVMQDIAMPSEVLSSMTT 577
+ ++ P S ++ + L++ SH F ++ ++ P+ V+SS
Sbjct: 158 SMETSLPPTSSSLPTTETATTPTTNLVTTEITSHSTPSFSSSTIHSTVSTPTTVISSGPP 217
Query: 578 FLSKWSGSVPVDWEKSVHSPDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEH 637
S+ V S+ + L TPT ++ ++ L + + + +S
Sbjct: 218 TSGTIVTSITVT-PSSLSTDIPLTTPTTITHHSVGSTESLLTATDLTSTFTVSSSSAMST 276
Query: 638 NHTSDTPEVSQQIHSFIIPTEIISAPGMSINTKFVWNSTSDSTLLPMETDCFISKLVDEG 697
+ +P + S ++ + P + N+ + S L S +
Sbjct: 277 SDIPSSPSIQNTETSSLVSMTSATIPSVRPTFTSTHNTLTSSLLTTFPGTYSFSSSMSAS 336
Query: 698 SLCDGDVIIKTQSYSKETPSFTQLHDLSELSLSEVSKFS 736
S D T++ + S + LH +E + + + S
Sbjct: 337 S----DGTTHTETITSLPASTSTLHTTAESTTAHTTTTS 371
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 32.3 bits (72), Expect = 2.7
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 4 ENSICTDLKTTEQVKRKKRYDDDDDDDDDIKVRQKSSWSQKLGVKKCVRFSKVISSYPGR 63
E+SI KT E+ K KK+ +D DDD + V + + +++ + ++ Y R
Sbjct: 2604 ESSINYTFKTPEKAKEKKKPEDSPSDDDVLIVYELTPTAEQKALATKLKLPPTFFCYKNR 2663
Query: 64 ANY 66
+Y
Sbjct: 2664 PDY 2666
>gi|62865614 TAF9 RNA polymerase II, TATA box binding
protein-associated factor isoform a [Homo sapiens]
Length = 264
Score = 32.3 bits (72), Expect = 2.7
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDD 32
M S+N T +++ +KRK+ DDDDDDDDD
Sbjct: 231 MSSQN---TANESSNALKRKREDDDDDDDDDD 259
>gi|4507351 TAF9 RNA polymerase II, TATA box binding
protein-associated factor isoform a [Homo sapiens]
Length = 264
Score = 32.3 bits (72), Expect = 2.7
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 1 MFSENSICTDLKTTEQVKRKKRYDDDDDDDDD 32
M S+N T +++ +KRK+ DDDDDDDDD
Sbjct: 231 MSSQN---TANESSNALKRKREDDDDDDDDDD 259
>gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo
sapiens]
Length = 803
Score = 32.3 bits (72), Expect = 2.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 251 LKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLWNL 297
LKAA GV LF +Y ++ + HL SPF ++++ W L
Sbjct: 641 LKAAMSGQGVDRHLFALYIVSRFLHL------QSPFLTQVHSEQWQL 681
>gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo
sapiens]
Length = 792
Score = 32.3 bits (72), Expect = 2.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 251 LKAAAEALGVQERLFLVYTLADYFHLDPSSVTMSPFRSKINKHLWNL 297
LKAA GV LF +Y ++ + HL SPF ++++ W L
Sbjct: 630 LKAAMSGQGVDRHLFALYIVSRFLHL------QSPFLTQVHSEQWQL 670
>gi|119120894 Dmx-like 2 [Homo sapiens]
Length = 3036
Score = 32.0 bits (71), Expect = 3.5
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 722 HDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITATVGHTFHFP 781
HDLS SE S+ E E GS LS P PTV+ ++ T +
Sbjct: 448 HDLSLDRESEAGTGSSEHEDGEREGSPRTYSRLSVPMPLPTVLLDRKIETLLT----EWN 503
Query: 782 IPPDTFYDQEDGNSTHLTLEIKSVNEYPSGPESWLQFNMTHQILYGYP 829
PD + + T L +K ++EY G +Q + + +I +P
Sbjct: 504 KNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFSSRIPVAFP 551
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 31.6 bits (70), Expect = 4.5
Identities = 55/241 (22%), Positives = 86/241 (35%), Gaps = 18/241 (7%)
Query: 537 SISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWEKSVHS 596
S S G++ ++++ S P I + S TF S + S E + HS
Sbjct: 6 SRSTPGFTSSIVTTETTSPHT-PGFTSSITTTETIPHSTPTFTSLITTS-----EMTSHS 59
Query: 597 PDSLLTPTASARETLAASHFPLEFSQVLLSNQLSQQHLHEHNHTSDTPEV-SQQIHSFII 655
SL T S T + S+ P F+ + S + + + T E S SF
Sbjct: 60 TPSL---TFSITTTKSTSYSPPSFTSSITSTESTSHSTPPFTSSITTNETTSHSTPSFTT 116
Query: 656 PTEIISAPGMSINTKFVWNSTSDS---TLLPMETDCFISKLVDEGSLCDGDVIIKTQSYS 712
S + NS +DS + P + ++ + II T++ S
Sbjct: 117 SITKTKTTSHSTPSFTSSNSITDSRSHSTPPFTSSVTTPEMTSHNTPSFMSSIITTETTS 176
Query: 713 KETPSFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILSQPNTFPTVVNSIQLITA 772
TPSFT S S VS + A P + S P++ T + + L T
Sbjct: 177 HSTPSFT-----SSTIHSTVSSSTTAITSPFTTAETGVTSTPSSPSSLSTDIPTTSLRTL 231
Query: 773 T 773
T
Sbjct: 232 T 232
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 31.6 bits (70), Expect = 4.5
Identities = 55/259 (21%), Positives = 93/259 (35%), Gaps = 24/259 (9%)
Query: 371 SSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEA---SPIPSLCAALRQITPI-PD 426
++ P+ST G T ++T+ S +V +PT T +A +P S A +T
Sbjct: 4440 TATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKAT 4499
Query: 427 PNFIPNTAR---SLFQKCTKTKRPQHTAVSQNSL------QEMSLTTNLEYSAAFAEVTP 477
P+ P TA +L T TA+ +SL + T S A TP
Sbjct: 4500 PSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 4559
Query: 478 SMVLMATAFTDFDFLQGRTSTVSM------SVENLDSPEWELKGHTLIHGTEIQKHTILP 531
V +T T G T +V+ + P G T + P
Sbjct: 4560 ETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPP 4619
Query: 532 DLVSESISQAGYSQALLSLSKYSHFLKPSVMQDIAMPSEVLSSMTTFLSKWSGSVPVDWE 591
+S + + + + + PS + + VL++ TT ++ S + P
Sbjct: 4620 VWISTTTTPTTTTPTTSGST-----VTPSSIPGTTHTARVLTTTTTTVATGSMATPSSST 4674
Query: 592 KSVHSPDSLLTPTASARET 610
++ +P SL T + T
Sbjct: 4675 QTSGTPPSLTTTATTITAT 4693
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 31.2 bits (69), Expect = 5.9
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 13/143 (9%)
Query: 371 SSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEA---SPIPSLCAALRQITPI-PD 426
++ P+ST G T ++T+ S +V +PT T +A +P S A +T
Sbjct: 4910 TATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKAT 4969
Query: 427 PNFIPNTAR---SLFQKCTKTKRPQHTAVSQNSL------QEMSLTTNLEYSAAFAEVTP 477
P+ P TA +L T TA+ +SL + T S A TP
Sbjct: 4970 PSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 5029
Query: 478 SMVLMATAFTDFDFLQGRTSTVS 500
V +T T G T +V+
Sbjct: 5030 ETVHTSTVLTATATTTGATGSVA 5052
>gi|22027471 neuronal PAS domain protein 2 [Homo sapiens]
Length = 824
Score = 31.2 bits (69), Expect = 5.9
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 361 KSQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQ 420
+S + S PTST PT+L+ + S P LP S T +P++ P+P L A
Sbjct: 413 RSSHKSSHTAMSEPTST--PTKLMAEASTP---ALPRSAT--LPQE--LPVPGLSQAATM 463
Query: 421 ITPIPDPNFIPNTARSLFQ 439
P+P P+ T + L Q
Sbjct: 464 PAPLPSPSSCDLTQQLLPQ 482
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 31.2 bits (69), Expect = 5.9
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 4/107 (3%)
Query: 364 TRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHW---MPKDEASPIPSLCAALRQ 420
T+ P + TST+ PT T P + + T+ T P +P P+
Sbjct: 1446 TQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTPTAITTTTT 1505
Query: 421 ITPIPDPNFIPN-TARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNL 466
+TP P P T+ + T T P T + +S TT +
Sbjct: 1506 VTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTV 1552
Score = 30.8 bits (68), Expect = 7.7
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 362 SQTRRPRQLSSIPTSTMGPTELITKLSKPFSVLLPTSVTHW-MPKDEASPIPSLCAALRQ 420
+QT P +S+ T T PT T+ + T+VT P +P L
Sbjct: 1538 TQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTVLITTTTT 1597
Query: 421 ITPIPDPNFIPN-TARSLFQKCTKTKRPQHTAVSQNSLQEMSLTTNL 466
+TP P P + T + T T P T ++ +S TT +
Sbjct: 1598 MTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQTPTMIPISTTTTV 1644
>gi|4505683 platelet-derived growth factor receptor beta precursor
[Homo sapiens]
Length = 1106
Score = 30.8 bits (68), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 557 LKPSVMQDIAM----PSEVLSSMTTFLSKWSGSVPVDWEKSVHSP 597
L+P + Q + + P VL+ +TF+ SGS PV WE+ P
Sbjct: 25 LEPQISQGLVVTPPGPELVLNVSSTFVLTCSGSAPVVWERMSQEP 69
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 30.8 bits (68), Expect = 7.7
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 371 SSIPTSTMGPTELITKLSKPFSVLLPTSVTHWMPKDEASPIPSLCAALRQITPIPDPNFI 430
SS PT T T +T S+P +L +S P + PS L TP P I
Sbjct: 169 SSTPTLTPSSTPTLTPSSRP--ILTRSSTPTLTPSSTPTLTPSSTPTL---TPSNTPTLI 223
Query: 431 PNTARSLFQKCTKT----KRPQHTAVSQNSLQEMSLTT 464
P++ +L T T RP T S +L S T
Sbjct: 224 PSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSSTPT 261
>gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens]
Length = 778
Score = 30.8 bits (68), Expect = 7.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 700 CDGDVIIKTQSYSKETP----SFTQLHDLSELSLSEVSKFSNAFELPENMGSKTMMHILS 755
CD + + + K+ S+ QLH LS++ L+ +++ S L GS+ + HI
Sbjct: 460 CDSGLNVNKERGHKDQEEKRFSYQQLHTLSDMDLNNLNELSKRHVLLSQKGSQFVYHI-- 517
Query: 756 QPNTFPTVVNSIQL 769
NT + N QL
Sbjct: 518 --NTHGSTKNKKQL 529
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,867,263
Number of Sequences: 37866
Number of extensions: 2037804
Number of successful extensions: 6291
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6203
Number of HSP's gapped (non-prelim): 79
length of query: 1149
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1036
effective length of database: 13,968,660
effective search space: 14471531760
effective search space used: 14471531760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.