Guide to the Human Genome
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Name: MS4A7 Sequence: fasta or formatted (195aa) NCBI GI: 46249347
Description:

membrane-spanning 4-domains, subfamily A, member 7 isoform 2

Referenced in:

MS4 Family

Other entries for this name:
alt prot [240aa] membrane-spanning 4-domains, subfamily A, member 7 isoform 1
alt prot [240aa] membrane-spanning 4-domains, subfamily A, member 7 isoform 1
alt mRNA [195aa] membrane-spanning 4-domains, subfamily A, member 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1          8           2
 C cysteine            1.0          2           1
 D aspartate           3.1          6           1
 E glutamate           3.6          7           1
 F phenylalanine       3.6          7           1
 G glycine             6.7         13           1
 H histidine           2.1          4           1
 I isoleucine          5.1         10           2
 K lysine              4.1          8           2
 L leucine            12.3         24           3
 M methionine          3.1          6           1
 N asparagine          2.6          5           2
 P proline             4.1          8           1
 Q glutamine           6.2         12           2
 R arginine            1.5          3           1
 S serine             16.4         32           3
 T threonine           7.7         15           2
 V valine              6.2         12           2
 W tryptophan          1.5          3           2
 Y tyrosine            5.1         10           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-spanning 4-domains, subfamily A, member 7 i... 
MS4A7                 1.000   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.939   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.939   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A6A                0.144   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A6A                0.144   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A6E                0.097   membrane-spanning 4-domains, subfamily A, member 6E ...
MS4A4A                0.050   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A4A                0.050   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A4E                0.047   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.047   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.047   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A2                 0.030   membrane-spanning 4-domains, subfamily A, member 2 is...
MS4A3                 0.028   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A12                0.028   membrane-spanning 4-domains, subfamily A, member 12 [...
MS4A6A                0.022   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A2                 0.019   membrane-spanning 4-domains, subfamily A, member 2 ...
TEF                   0.014   thyrotrophic embryonic factor isoform 2 
TEF                   0.014   thyrotrophic embryonic factor isoform 1 
SLC25A12              0.014   solute carrier family 25, member 12 
MS4A5                 0.014   membrane-spanning 4-domains, subfamily A, member 5 [...
LOC728588             0.011   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.011   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.011   PREDICTED: similar to membrane-spanning 4-domains, ...
MS4A3                 0.011   membrane-spanning 4-domains, subfamily A, member 3 i...
DIABLO                0.008   diablo isoform 1 precursor 
MS4A15                0.008   membrane-spanning 4-domains, subfamily A, member 15...
MS4A15                0.008   membrane-spanning 4-domains, subfamily A, member 15 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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