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Search of human proteins with 239755255
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 619 e-178
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 539 e-153
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 539 e-153
gi|239753416 PREDICTED: hypothetical protein XP_002345645 [Homo ... 63 3e-10
gi|239747980 PREDICTED: hypothetical protein XP_002346488 [Homo ... 63 3e-10
gi|239741880 PREDICTED: hypothetical protein XP_002342332 [Homo ... 63 3e-10
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 52 5e-07
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 50 2e-06
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 49 7e-06
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 48 9e-06
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 46 3e-05
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 45 8e-05
gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo ... 45 8e-05
gi|119395750 keratin 1 [Homo sapiens] 45 1e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 45 1e-04
gi|28269693 xylosyltransferase I [Homo sapiens] 45 1e-04
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 44 1e-04
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 44 1e-04
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 44 2e-04
gi|54873602 hypothetical protein LOC220382 [Homo sapiens] 42 5e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 42 5e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 42 5e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 42 5e-04
gi|239748304 PREDICTED: hypothetical protein XP_002346608 [Homo ... 42 7e-04
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 619 bits (1597), Expect = e-178
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MCGDRGGNANCKVWVLGGAAPPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPA 60
MCGDRGGNANCKVWVLGGAAPPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPA
Sbjct: 1 MCGDRGGNANCKVWVLGGAAPPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPA 60
Query: 61 PSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLE 120
PSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLE
Sbjct: 61 PSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLE 120
Query: 121 LGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGA 180
LGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGA
Sbjct: 121 LGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGA 180
Query: 181 GGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEG 240
GGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEG
Sbjct: 181 GGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEG 240
Query: 241 AVGVGGGSAAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 297
AVGVGGGSAAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT
Sbjct: 241 AVGVGGGSAAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 297
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 539 bits (1389), Expect = e-153
Identities = 266/278 (95%), Positives = 266/278 (95%), Gaps = 2/278 (0%)
Query: 20 APPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH 79
AP P L P PPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH
Sbjct: 171 APSTAFPSFLLPP--GLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH 228
Query: 80 DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH 139
DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH
Sbjct: 229 DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH 288
Query: 140 PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA 199
PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA
Sbjct: 289 PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA 348
Query: 200 AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS 259
AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS
Sbjct: 349 AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS 408
Query: 260 ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 297
ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT
Sbjct: 409 ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 446
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 539 bits (1389), Expect = e-153
Identities = 266/278 (95%), Positives = 266/278 (95%), Gaps = 2/278 (0%)
Query: 20 APPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH 79
AP P L P PPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH
Sbjct: 171 APSTAFPSFLLPP--GLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH 228
Query: 80 DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH 139
DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH
Sbjct: 229 DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH 288
Query: 140 PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA 199
PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA
Sbjct: 289 PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA 348
Query: 200 AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS 259
AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS
Sbjct: 349 AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS 408
Query: 260 ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 297
ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT
Sbjct: 409 ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 446
>gi|239753416 PREDICTED: hypothetical protein XP_002345645 [Homo
sapiens]
Length = 176
Score = 63.2 bits (152), Expect = 3e-10
Identities = 48/112 (42%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 22 PQPQPRSP---LSPWQASPPATSPRAWQLSRGPG-GRSPLPPAPSRGPATCMGAALLLPE 77
P+P P LSPW + P GP G PL +G + L
Sbjct: 66 PEPHPNPTFRLLSPWPSDPRKRGQERGVWGAGPSLGLEPLQVVEQLLLVE-LGHSRRLAA 124
Query: 78 AHDV-LGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQ 128
V G + +LLLQEAHL+DVVGEAVI+LLQLHLLVGA +L V VGQ
Sbjct: 125 LEPVHFGGERRVLLLQEAHLLDVVGEAVIELLQLHLLVGARGQKLLVHRVGQ 176
>gi|239747980 PREDICTED: hypothetical protein XP_002346488 [Homo
sapiens]
Length = 176
Score = 63.2 bits (152), Expect = 3e-10
Identities = 48/112 (42%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 22 PQPQPRSP---LSPWQASPPATSPRAWQLSRGPG-GRSPLPPAPSRGPATCMGAALLLPE 77
P+P P LSPW + P GP G PL +G + L
Sbjct: 66 PEPHPNPTFRLLSPWPSDPRKRGQERGVWGAGPSLGLEPLQVVEQLLLVE-LGHSRRLAA 124
Query: 78 AHDV-LGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQ 128
V G + +LLLQEAHL+DVVGEAVI+LLQLHLLVGA +L V VGQ
Sbjct: 125 LEPVHFGGERRVLLLQEAHLLDVVGEAVIELLQLHLLVGARGQKLLVHRVGQ 176
>gi|239741880 PREDICTED: hypothetical protein XP_002342332 [Homo
sapiens]
Length = 176
Score = 63.2 bits (152), Expect = 3e-10
Identities = 48/112 (42%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 22 PQPQPRSP---LSPWQASPPATSPRAWQLSRGPG-GRSPLPPAPSRGPATCMGAALLLPE 77
P+P P LSPW + P GP G PL +G + L
Sbjct: 66 PEPHPNPTFRLLSPWPSDPRKRGQERGVWGAGPSLGLEPLQVVEQLLLVE-LGHSRRLAA 124
Query: 78 AHDV-LGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQ 128
V G + +LLLQEAHL+DVVGEAVI+LLQLHLLVGA +L V VGQ
Sbjct: 125 LEPVHFGGERRVLLLQEAHLLDVVGEAVIELLQLHLLVGARGQKLLVHRVGQ 176
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 52.4 bits (124), Expect = 5e-07
Identities = 47/131 (35%), Positives = 55/131 (41%), Gaps = 28/131 (21%)
Query: 139 HPG-HAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAG------A 191
HPG + AP A A G+++A AAA A A +A A GA AP +
Sbjct: 340 HPGLYQAPAA----AAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSS 395
Query: 192 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAA 251
+ A A AA A+G RG GG G GG G G G GGGS
Sbjct: 396 QSAAAAAAAAAAALGSRG---GGGGGGG--------------GGGGGGGGAGAGGGSDFG 438
Query: 252 SLARGPRSESG 262
A PRSESG
Sbjct: 439 CSAAAPRSESG 449
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 50.1 bits (118), Expect = 2e-06
Identities = 74/272 (27%), Positives = 89/272 (32%), Gaps = 69/272 (25%)
Query: 37 PPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHL 96
P P W + PG P PSR A+L D GQQ+
Sbjct: 18 PVNHGPLLWTWTAPPGAPILAAP-PSRAHPRVRIASLHRFRIEDAHGQQE---------- 66
Query: 97 VDVVGEAVIQLLQLHLLVGAGVLELGVDGVG----------------QREVHRVLQE-PH 139
V GE + +L G E+ V G G R RVL P
Sbjct: 67 --VRGEGTYWAVGKGVLSGRTWCEMLVAGAGGSQKAGRPHFQGRVDVMRRDPRVLPGIPA 124
Query: 140 PGH-----AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPA 194
PG AP+AHG GA G A RG + A +AA G G ++ G P
Sbjct: 125 PGKHHRVSGAPRAHGTGAHGTGALRGDFRQCREPARTPQAASRDGDGASPALSAPGREPG 184
Query: 195 RGARAAEH----------PAVGGRGHGPGGHGCGG--WRW---PGRRRWRGLAPGEEANE 239
RG R A P GH H +RW P RR W E
Sbjct: 185 RGGRPARRTTQRAASSSLPPRRSEGHPDAPHRSPRPLYRWLGPPPRRDW--------MRE 236
Query: 240 GAVGVGGG-----------SAAASLARGPRSE 260
VG GGG A +++ GPR E
Sbjct: 237 DGVGAGGGPQEPRFPLRRREARSAVVAGPRRE 268
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 48.5 bits (114), Expect = 7e-06
Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 127 GQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRS-- 184
G+R+ HR P P ++ G + R RG +AA G G R ++ G G +
Sbjct: 220 GRRKKHR---RPKPAAGGAKSRRGGGKKPQKQRRRGQKAATG-GKSRVGKSRGGGDKKLR 275
Query: 185 ----HVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGG----WRWPGRR-RWRGLAPGE 235
+ A AGA+ A A E PA GRG G G GG W G++ R RG +
Sbjct: 276 RQGQNAALAGAKRRGAATAGEKPAAKGRG-GRGPKSLGGQNPRWGRGGKKPRRRGQKATK 334
Query: 236 EANEGAVGVGGGSAAASL--ARGPRSESGRGLDP 267
A G GGG A++ + + + RG P
Sbjct: 335 AAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKP 368
Score = 40.0 bits (92), Expect = 0.002
Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 116 AGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHG--RGARGIHAARGRGVEAAAGAG-AQ 172
AG VGQ R ++P A + G A GI+ + RG + G
Sbjct: 669 AGSESSAAAAVGQEAEAR--KKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGG 726
Query: 173 RAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA 232
A++ G+GG GA+ G +AA + HG GG +R RG
Sbjct: 727 GGAKSRGSGGAKSRGSGGAKSRSGKKAA-----ASKSHGGGG----------AKRRRGGG 771
Query: 233 PGEEANEGAVGVGGGSAAASLARGP---RSESGRGLDPAEG 270
+ E AV GG AAA+ + P +S GRG A G
Sbjct: 772 AKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAG 812
Score = 38.5 bits (88), Expect = 0.007
Identities = 41/146 (28%), Positives = 50/146 (34%), Gaps = 23/146 (15%)
Query: 136 QEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR 195
Q P G + RG + AA G G Q+ A VG R G +P R
Sbjct: 314 QNPRWGRGGKKPRRRGQKATKAA---AAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRR 370
Query: 196 GARAAEHPAVGGRGHGPG-------GHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGS 248
+A G G G G G RW RR AP + GGGS
Sbjct: 371 QKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPR------GGGS 424
Query: 249 -------AAASLARGPRSESGRGLDP 267
A+ +RG +S SG G P
Sbjct: 425 KKPRRRGPKAAKSRGGKSRSGGGKKP 450
Score = 38.1 bits (87), Expect = 0.009
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 150 RGARGIHAARGRGVEAA-AGAGAQRAAQ-AVGAGGRSHVAPAGARPARGARAAEHPAVGG 207
+ A G AR RG + A AG A++ Q A GAGG + + A AA ++GG
Sbjct: 63 KAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAA----AAGTKSLGG 118
Query: 208 RGHGPGGHGCGGWRWPGRR-RWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLD 266
RG P G ++ RWR + A G+ G G+ A+ A G +S+ G
Sbjct: 119 RGRKPRRRGQKAAATGSKKPRWRAQ---KSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQ 175
Query: 267 PAEGAVFITPLGKRVPSHCHPSRG 290
A A + GK+ SRG
Sbjct: 176 KAAAAGAKSRSGKKPRRRGAKSRG 199
Score = 36.6 bits (83), Expect = 0.027
Identities = 45/164 (27%), Positives = 56/164 (34%), Gaps = 24/164 (14%)
Query: 147 AHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVG 206
A G +RG + R + AA AA AVG + P R ++ AVG
Sbjct: 648 ATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVG 707
Query: 207 -------------GRGHGPGG---HGCGGWRWPGRRRWRGLAPGEEANEGAVGV--GGGS 248
G+ G GG G GG + R G A + A GGG
Sbjct: 708 INPWQRRGKKPRLGKSRGGGGAKSRGSGG----AKSRGSGGAKSRSGKKAAASKSHGGGG 763
Query: 249 AAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 292
A G +S SG A G GK+ P SRG R
Sbjct: 764 AKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPR--VKSRGGR 805
Score = 36.2 bits (82), Expect = 0.036
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 145 PQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV-------GAGGRSHVAPAGARPARGA 197
P+ G +RG +GR EA + G R + AGG G +P +
Sbjct: 190 PRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQR 249
Query: 198 RAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASL-ARG 256
R + A GG+ G GG RR+ + A GA G AA RG
Sbjct: 250 RRGQKAATGGKSR--VGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRG 307
Query: 257 PRSESGR 263
P+S G+
Sbjct: 308 PKSLGGQ 314
Score = 33.9 bits (76), Expect = 0.18
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 144 APQAHGRGA-------RGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGAR---- 192
AP A RG RG AA+ RG ++ +G G + + G R A AGA
Sbjct: 414 APAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGG--KKPRRRGQKARQKAAEAGAESRGD 471
Query: 193 PARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGS 248
+G + A RG G H G+ WR E A E A G S
Sbjct: 472 KKQGRQKASAAGTKSRGGGLKSHS-------GKNLWRRGQKAEAAGEKATAAGAKS 520
Score = 33.9 bits (76), Expect = 0.18
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 16/143 (11%)
Query: 143 AAPQAHGRGAR--GIHAARGRGVEAAAGAGAQRA--AQAVGAGGRSHVAPAGARPARGAR 198
AA + G G + G A ++ +G G ++A +A G G +S P R + A
Sbjct: 583 AAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKP-WRRGQKDAA 641
Query: 199 AAEHP-AVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGP 257
AAE A G G GG + RW+ A + A VG + A R
Sbjct: 642 AAEKAWATGATSRGSGGK---------QPRWQKPAAAGSESSAAAAVGQEAEARKKPRRR 692
Query: 258 RSESGRGLDPAEGAVFITPLGKR 280
R++S RG AV I P +R
Sbjct: 693 RAKS-RGDGGQNAAVGINPWQRR 714
Score = 32.7 bits (73), Expect = 0.39
Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 143 AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAP----AGARPARGAR 198
AA + RGA AA GV++ G Q+AA A GA RS P A +R +
Sbjct: 146 AAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAA-AAGAKSRSGKKPRRRGAKSRGDEDKK 204
Query: 199 AAEHPAVGGRGHGPGGH---------GCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSA 249
+ A G GG GG + RR G P ++ G GG +
Sbjct: 205 GRQREAKSRFGKTRGGRRKKHRRPKPAAGGAK---SRRGGGKKPQKQRRRGQKAATGGKS 261
Query: 250 AASLARG 256
+RG
Sbjct: 262 RVGKSRG 268
Score = 32.7 bits (73), Expect = 0.39
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 18/112 (16%)
Query: 115 GAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRA 174
G G G G R AA ++HG G A R RG GA ++
Sbjct: 726 GGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGG----AKRRRG----GGAKSRSG 777
Query: 175 AQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRR 226
+AV AGG+ A G +P P V RG G G G + P RR
Sbjct: 778 EKAVTAGGQKAAAAGGKKP---------PRVKSRG-GRGQKAAAGGKKPLRR 819
Score = 29.3 bits (64), Expect = 4.4
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 158 ARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGC 217
+RG G+++ +G R Q A G A R + PAV G GG
Sbjct: 486 SRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGS-- 543
Query: 218 GGWRWPGRRRWRGLAPGEEANEGA---VGVGGG---------SAAASLARG 256
R+R + +A G ++ G GGG +AAA+ RG
Sbjct: 544 -----KSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRG 589
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 48.1 bits (113), Expect = 9e-06
Identities = 44/148 (29%), Positives = 53/148 (35%), Gaps = 34/148 (22%)
Query: 139 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGAR 198
H AP+AHG GA G A RG + A +AA G G ++ G P RG R
Sbjct: 121 HRVSGAPRAHGTGAHGTGALRGDFRQCREPARTPQAASRDGDGASPALSAPGREPGRGGR 180
Query: 199 AAEH----------PAVGGRGHGPGGHGCGG--WRW---PGRRRWRGLAPGEEANEGAVG 243
A P GH H +RW P RR W E VG
Sbjct: 181 PARRTTQRAASSSLPPRRSEGHPDAPHRSPRPLYRWLGPPPRRDW--------MREDGVG 232
Query: 244 VGGG-----------SAAASLARGPRSE 260
GGG A +++ GPR E
Sbjct: 233 AGGGPQEPRFPLRRREARSAVVAGPRRE 260
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 46.2 bits (108), Expect = 3e-05
Identities = 72/294 (24%), Positives = 105/294 (35%), Gaps = 55/294 (18%)
Query: 16 LGGAAPPQPQPRSPLSPWQASPPATSPR---AWQLSR-GPGGRSPLPPAPSRGPATCMGA 71
L +P P+ +P S + + P SP +W S G GR G
Sbjct: 36 LASPSPRDPKVSAPPSILEPASPLNSPGTEGSWLFSTCGASGRHGPTQTQCDGAYAGTSV 95
Query: 72 ALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREV 131
+ + A + G Q + +L+ G A + + HL GV + +G E
Sbjct: 96 VVTVGAAGQLRGVQLWRVPGPGQYLISAYGAAGGKGAKNHLSRAHGVFVSAIFSLGLGES 155
Query: 132 HRVL-----QEPHPGHA------------APQAHGR--GARGIHAARGRGVEAAAGAGAQ 172
+L ++ PG + A + H G+ G+ +R G GA
Sbjct: 156 LYILVGQQGEDACPGGSPESQLVCLGESRAVEEHAAMDGSEGVPGSRRWAGGGGGGGGAT 215
Query: 173 -----RAAQ------AVGAGGRSHVAPAG-----ARPARGARAAEHPAVGGRGHGPGGHG 216
RA + A G GGR+++ P A P + +E P GGRG GG
Sbjct: 216 YVFRVRAGELEPLLVAAGGGGRAYLRPRDRGRTQASPEKLENRSEAPGSGGRGGAAGGG- 274
Query: 217 CGGW--RWPGRRRWRGLAPGEEANEG------------AVGVGGGSAAASLARG 256
GGW R P + R L G E +G A G GGG A + G
Sbjct: 275 -GGWTSRAPSPQAGRSLQEGAEGGQGCSEAWATLGWAAAGGFGGGGGACTAGGG 327
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 45.4 bits (106), Expect = 6e-05
Identities = 72/268 (26%), Positives = 91/268 (33%), Gaps = 65/268 (24%)
Query: 47 LSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVD--VVGEAV 104
+ RG GG P RG G L + VLG+ + A + V G
Sbjct: 722 IQRGRGGLGHRPLPGWRG----QGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGHVP 777
Query: 105 IQLLQLHLLVGAGVLELGV--------DGVGQREVHRVLQEPHPGHAAPQAHGRGA---- 152
++L + G G L G+ +G VL + H A A G GA
Sbjct: 778 VELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGG 837
Query: 153 ------------RGIHAARGR-GVEAAAGAGAQRAAQAVGAGGR---------------- 183
R + A R R G A A AG Q A G GGR
Sbjct: 838 PLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGA--GAGGGGRRVRHGHGHGAAVLQRA 895
Query: 184 -----SHVAP-AGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEA 237
H+AP A A A+G RAA+ GR H PG G P R G
Sbjct: 896 PCRQQRHLAPAAAAAAAQGVRAAQ-----GRAHRPGAQGA-----PSHRHRPGARGRRSR 945
Query: 238 NEGAVGVGGGSAAASLARGPRSESGRGL 265
AV + GG+ A A G R G+ +
Sbjct: 946 RRAAVALAGGAHPARAALGRRRGGGQAV 973
Score = 37.7 bits (86), Expect = 0.012
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 14/145 (9%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV-GAGGRSHVAPAGARP------ 193
G HG GA + A R A A A AAQ V A GR+H A P
Sbjct: 878 GRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRP 937
Query: 194 -ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGG-SAAA 251
ARG R+ AV G G H GRRR G A G A A GG
Sbjct: 938 GARGRRSRRRAAVALAG---GAHPARAAL--GRRRGGGQAVGARAAHQARLAGGQVDQVV 992
Query: 252 SLARGPRSESGRGLDPAEGAVFITP 276
AR ++ RG P A+ P
Sbjct: 993 VAARAGDADGVRGRRPRRLALTARP 1017
Score = 34.7 bits (78), Expect = 0.10
Identities = 36/104 (34%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 101 GEAVIQLL----QLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIH 156
G AV+Q Q HL A Q HR + P H H GARG
Sbjct: 888 GAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHR----HRPGARGRR 943
Query: 157 AARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
+ R V A GA RAA GG V GAR A AR A
Sbjct: 944 SRRRAAVALAGGAHPARAALGRRRGGGQAV---GARAAHQARLA 984
Score = 30.0 bits (66), Expect = 2.6
Identities = 48/183 (26%), Positives = 65/183 (35%), Gaps = 39/183 (21%)
Query: 114 VGAGVLELGVDGVGQR-EVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQ 172
+GA V G+ G+ + + +L E P HA +A G+ + R R
Sbjct: 292 LGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDR----------- 340
Query: 173 RAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA 232
+ G +SH+ P R RAA GGRG R GRR R
Sbjct: 341 --LRRGGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRR---------RQQGRRGRRQAG 389
Query: 233 PG-----EEANEGAVG-------VGGGSAAASL---ARGPRSESGRGLDPAEGAVFITPL 277
PG + GA+G V G A L ARGP + + A P
Sbjct: 390 PGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAA-ARPH 448
Query: 278 GKR 280
G+R
Sbjct: 449 GRR 451
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 45.4 bits (106), Expect = 6e-05
Identities = 72/268 (26%), Positives = 91/268 (33%), Gaps = 65/268 (24%)
Query: 47 LSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVD--VVGEAV 104
+ RG GG P RG G L + VLG+ + A + V G
Sbjct: 722 IQRGRGGLGHRPLPGWRG----QGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGHVP 777
Query: 105 IQLLQLHLLVGAGVLELGV--------DGVGQREVHRVLQEPHPGHAAPQAHGRGA---- 152
++L + G G L G+ +G VL + H A A G GA
Sbjct: 778 VELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGG 837
Query: 153 ------------RGIHAARGR-GVEAAAGAGAQRAAQAVGAGGR---------------- 183
R + A R R G A A AG Q A G GGR
Sbjct: 838 PLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGA--GAGGGGRRVRHGHGHGAAVLQRA 895
Query: 184 -----SHVAP-AGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEA 237
H+AP A A A+G RAA+ GR H PG G P R G
Sbjct: 896 PCRQQRHLAPAAAAAAAQGVRAAQ-----GRAHRPGAQGA-----PSHRHRPGARGRRSR 945
Query: 238 NEGAVGVGGGSAAASLARGPRSESGRGL 265
AV + GG+ A A G R G+ +
Sbjct: 946 RRAAVALAGGAHPARAALGRRRGGGQAV 973
Score = 37.7 bits (86), Expect = 0.012
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 14/145 (9%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV-GAGGRSHVAPAGARP------ 193
G HG GA + A R A A A AAQ V A GR+H A P
Sbjct: 878 GRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRP 937
Query: 194 -ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGG-SAAA 251
ARG R+ AV G G H GRRR G A G A A GG
Sbjct: 938 GARGRRSRRRAAVALAG---GAHPARAAL--GRRRGGGQAVGARAAHQARLAGGQVDQVV 992
Query: 252 SLARGPRSESGRGLDPAEGAVFITP 276
AR ++ RG P A+ P
Sbjct: 993 VAARAGDADGVRGRRPRRLALTARP 1017
Score = 34.7 bits (78), Expect = 0.10
Identities = 36/104 (34%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 101 GEAVIQLL----QLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIH 156
G AV+Q Q HL A Q HR + P H H GARG
Sbjct: 888 GAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHR----HRPGARGRR 943
Query: 157 AARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
+ R V A GA RAA GG V GAR A AR A
Sbjct: 944 SRRRAAVALAGGAHPARAALGRRRGGGQAV---GARAAHQARLA 984
Score = 30.0 bits (66), Expect = 2.6
Identities = 48/183 (26%), Positives = 65/183 (35%), Gaps = 39/183 (21%)
Query: 114 VGAGVLELGVDGVGQR-EVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQ 172
+GA V G+ G+ + + +L E P HA +A G+ + R R
Sbjct: 292 LGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDR----------- 340
Query: 173 RAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA 232
+ G +SH+ P R RAA GGRG R GRR R
Sbjct: 341 --LRRGGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRR---------RQQGRRGRRQAG 389
Query: 233 PG-----EEANEGAVG-------VGGGSAAASL---ARGPRSESGRGLDPAEGAVFITPL 277
PG + GA+G V G A L ARGP + + A P
Sbjct: 390 PGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAA-ARPH 448
Query: 278 GKR 280
G+R
Sbjct: 449 GRR 451
>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
sapiens]
Length = 697
Score = 45.1 bits (105), Expect = 8e-05
Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 65 PATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVD 124
P G ++L +AH L L L QEA EA+ H LV V GV
Sbjct: 363 PGADDGLRVVLDQAHP-LAFWSLRLWEQEAG-----SEALRGSSAPHPLVPGAVGAEGVR 416
Query: 125 GVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRS 184
G+ ++EV P H++P H G G A G GV+ + G + + +
Sbjct: 417 GLWEQEVGSKALRGSPAHSSPALHP-GVPGSVGA-GEGVKGSQRHGDSTTSLIISYALVT 474
Query: 185 HVA-PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 243
+ P A H GGR G G G R P RR + G +A A
Sbjct: 475 IMDFPIPQGLALTTHPGWHSEAGGRRDGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAA 534
Query: 244 VGGGSAAASLARGPRSESG 262
+G G+A A+G S SG
Sbjct: 535 LGRGAALRRAAQGAGSASG 553
Score = 40.8 bits (94), Expect = 0.001
Identities = 34/86 (39%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 150 RGARGIHAARGRGVEAAAGAGAQRAA---------QAVGAGGRSHVAPAGARPARGARAA 200
+G RG H RG V+A AG Q AA A GAG S + GA ARG R A
Sbjct: 509 QGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRAAQGAGSASGLL-GGAVGARGRRRA 567
Query: 201 EHPAVGGRGHGPGGHGCGGWRWPGRR 226
P V G G G WR G R
Sbjct: 568 HKPVVVGERLRGRGARVGTWRRGGGR 593
>gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo
sapiens]
Length = 697
Score = 45.1 bits (105), Expect = 8e-05
Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 65 PATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVD 124
P G ++L +AH L L L QEA EA+ H LV V GV
Sbjct: 363 PGADDGLRVVLDQAHP-LAFWSLRLWEQEAG-----SEALRGSSAPHPLVPGAVGAEGVR 416
Query: 125 GVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRS 184
G+ ++EV P H++P H G G A G GV+ + G + + +
Sbjct: 417 GLWEQEVGSKALRGSPAHSSPALHP-GVPGSVGA-GEGVKGSQRHGDSTTSLIISYALVT 474
Query: 185 HVA-PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 243
+ P A H GGR G G G R P RR + G +A A
Sbjct: 475 IMDFPIPQGLALTTHPGWHSEAGGRRDGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAA 534
Query: 244 VGGGSAAASLARGPRSESG 262
+G G+A A+G S SG
Sbjct: 535 LGRGAALRRAAQGAGSASG 553
Score = 37.7 bits (86), Expect = 0.012
Identities = 33/86 (38%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 150 RGARGIHAARGRGVEAAAGAGAQRAA---------QAVGAGGRSHVAPAGARPARGARAA 200
+G RG H RG V+A AG Q AA A GAG S + GA ARG R A
Sbjct: 509 QGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRAAQGAGSASGLL-GGAVGARGRRRA 567
Query: 201 EHPAVGGRGHGPGGHGCGGWRWPGRR 226
P V G G WR G R
Sbjct: 568 HKPVVVGERLRGRGARVRTWRRGGGR 593
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/137 (27%), Positives = 51/137 (37%), Gaps = 8/137 (5%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
G AP + G G G G + G+GG S+ + G RG+ +
Sbjct: 495 GECAPNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGS 554
Query: 201 EHPAVG------GRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLA 254
+ G G G G GGHG G G G + G G GGGS+ S+
Sbjct: 555 GGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSI- 613
Query: 255 RGPRSESGRGLDPAEGA 271
G R S G+ + G+
Sbjct: 614 -GGRGSSSGGVKSSGGS 629
Score = 32.7 bits (73), Expect = 0.39
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 149 GRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGR 208
G G+ G G G + G G + G+GG S+ + G+ + G G
Sbjct: 524 GYGSGGSSYGSGGGSYGSGGGGGGGRG-SYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGS 582
Query: 209 -------GHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAA 250
G G GG G G R G G G ++ G V GGS++
Sbjct: 583 SSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSS 631
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/160 (31%), Positives = 61/160 (38%), Gaps = 19/160 (11%)
Query: 137 EPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARG 196
EP P A A GA G A+G +A A A A AG + GA A+G
Sbjct: 804 EPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKG 863
Query: 197 ARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARG 256
AR + P PG G +PG G PG N G G G A +G
Sbjct: 864 ARGSAGP--------PGATG-----FPGAAGRVG-PPGPSGNAGPPG-PPGPAGKEGGKG 908
Query: 257 PRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 296
PR E+G P E + P G P+ S GA P G
Sbjct: 909 PRGETGPAGRPGE----VGPPGPPGPAGEKGSPGADGPAG 944
Score = 38.1 bits (87), Expect = 0.009
Identities = 52/173 (30%), Positives = 59/173 (34%), Gaps = 19/173 (10%)
Query: 140 PGHAAPQAHGRGARGIHAARG-------RGVEAAAG-AGAQRAAQAVG-AGGRSHVAPAG 190
PG A + RGARG G RG + G GA A G AG R PAG
Sbjct: 460 PGPAGEEGK-RGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAG 518
Query: 191 AR--PARGARAAEHPAVGGRG-----HGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 243
+ P R E G +G PG G G P + R PG G G
Sbjct: 519 PKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAG 578
Query: 244 VGGGSAAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 296
V G A P RG+ GAV P GK + G P G
Sbjct: 579 VMGFPGPKGAAGEPGKAGERGVPGPPGAV--GPAGKDGEAGAQGPPGPAGPAG 629
Score = 37.0 bits (84), Expect = 0.021
Identities = 42/126 (33%), Positives = 48/126 (38%), Gaps = 24/126 (19%)
Query: 141 GHAAPQAHGRGARGIHAARG-RGVEAAAG-AGAQRAAQAVGAGGRSHVAPAGARPARGAR 198
G A PQ G RG +G RG G AGA A GA G+ GA+ A GA
Sbjct: 353 GEAGPQ----GPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQP-----GAKGANGA- 402
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG--GSAAASLARG 256
P + G PG G G + PG PG + N G G G G A G
Sbjct: 403 ----PGIAGAPGFPGARGPSGPQGPGG------PPGPKGNSGEPGAPGSKGDTGAKGEPG 452
Query: 257 PRSESG 262
P G
Sbjct: 453 PVGVQG 458
Score = 37.0 bits (84), Expect = 0.021
Identities = 57/208 (27%), Positives = 69/208 (33%), Gaps = 51/208 (24%)
Query: 138 PHPGHAAPQAHGRGARGIHAARGR-------------------GVEAAAGAGAQRAAQAV 178
P P A + G+G RG GR G + AGA Q +
Sbjct: 895 PGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGI 954
Query: 179 GAGGRSHVAPAGARPARGARAAEHP-----------AVGGRGHGPGGHGCGGWRWPGRRR 227
AG R V G R RG P A G RG PG G G P
Sbjct: 955 -AGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGP-PGPMGPPGLAGPPGES 1012
Query: 228 WRGLAPGEEANEGAVGVGG--------------GSAAASLARGPRSESGRGLD-----PA 268
R APG E + G G G G+ A A GP +G+ D PA
Sbjct: 1013 GREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPA 1072
Query: 269 EGAVFITPLGKRVPSHCHPSRGARQPIG 296
A + P+G R P+ RG + G
Sbjct: 1073 GPAGPVGPVGARGPAGPQGPRGDKGETG 1100
Score = 36.2 bits (82), Expect = 0.036
Identities = 57/218 (26%), Positives = 76/218 (34%), Gaps = 49/218 (22%)
Query: 127 GQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAG--AGAQRAAQAVG-AGGR 183
G R V+ P P AA + G RG+ G A AGAQ G AG R
Sbjct: 572 GARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGER 631
Query: 184 SHVAPAGAR-----------PARGARAAEHPAVGGRGHGPGGHGCGGWR-WPGRRRWRGL 231
PAG+ P + E G G PG G G R +PG R +G
Sbjct: 632 GEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLG-APGPSGARGERGFPGERGVQGP 690
Query: 232 -----------------------APGEEANEGAVGVGG--GSAAASLARGPRSESG---- 262
APG ++GA G+ G G A+ GP+ + G
Sbjct: 691 PGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGP 750
Query: 263 RGLDPAEGAVFIT----PLGKRVPSHCHPSRGARQPIG 296
+G D + G + P+G P+ +G P G
Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSG 788
Score = 30.4 bits (67), Expect = 2.0
Identities = 33/121 (27%), Positives = 38/121 (31%), Gaps = 2/121 (1%)
Query: 151 GARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGH 210
GA G RG A + G R P GAR G A P + G
Sbjct: 212 GASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGT--AGLPGMKGHRG 269
Query: 211 GPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEG 270
G G G P + +PGE G +G G P RG D A G
Sbjct: 270 FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATG 329
Query: 271 A 271
A
Sbjct: 330 A 330
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 44.7 bits (104), Expect = 1e-04
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 167 AGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRR 226
+GAG +R AVG G + APA R R A A GG G G GG GG R P +
Sbjct: 40 SGAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGG---GGGRGP-QA 95
Query: 227 RWRGLAPGEEANEGAVGVGGGSAAA 251
R RG PGE + G A A
Sbjct: 96 RARGGGPGEPRGQQPASRGALPARA 120
Score = 28.5 bits (62), Expect = 7.4
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 3 GDRGGNANCKVWVLGGAA--PPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPA 60
G+R G A +GG PP P PR A P A G GGR P A
Sbjct: 43 GERRGGA-----AVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARA 97
Query: 61 PSRGPATCMG 70
GP G
Sbjct: 98 RGGGPGEPRG 107
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 44.7 bits (104), Expect = 1e-04
Identities = 81/272 (29%), Positives = 103/272 (37%), Gaps = 48/272 (17%)
Query: 22 PQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDV 81
P P PR + P S + A RG R+ P+ GP + G LLP
Sbjct: 34 PGPMPRGWILPGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGH--LLP----- 86
Query: 82 LGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLEL-GVDGVGQREVHRVLQEPHP 140
L Q+D L + GE ++ G G E+ G G++ V R
Sbjct: 87 LVQRDGGGLAEHRGRE---GEEGVRA------GGGGTGEVRGGGSPGRQPVGRAAVT--- 134
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 135 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 185
Query: 201 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 255
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 186 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 236
Query: 256 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 287
R + GR P + + L +RVP C P
Sbjct: 237 --RHQPGRD-RPHHHHLELESLRERVP--CEP 263
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 198
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 82 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 140
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 254
AA A RG G G + G R GL E A A G GGG A
Sbjct: 141 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 198
Query: 255 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 292
+ R G+G EG V G+R+ HC R ++
Sbjct: 199 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 235
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 44.7 bits (104), Expect = 1e-04
Identities = 81/272 (29%), Positives = 103/272 (37%), Gaps = 48/272 (17%)
Query: 22 PQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDV 81
P P PR + P S + A RG R+ P+ GP + G LLP
Sbjct: 34 PGPMPRGWILPGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGH--LLP----- 86
Query: 82 LGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLEL-GVDGVGQREVHRVLQEPHP 140
L Q+D L + GE ++ G G E+ G G++ V R
Sbjct: 87 LVQRDGGGLAEHRGRE---GEEGVRA------GGGGTGEVRGGGSPGRQPVGRAAVT--- 134
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 135 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 185
Query: 201 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 255
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 186 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 236
Query: 256 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 287
R + GR P + + L +RVP C P
Sbjct: 237 --RHQPGRD-RPHHHHLELESLRERVP--CEP 263
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 198
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 82 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 140
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 254
AA A RG G G + G R GL E A A G GGG A
Sbjct: 141 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 198
Query: 255 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 292
+ R G+G EG V G+R+ HC R ++
Sbjct: 199 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 235
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 44.7 bits (104), Expect = 1e-04
Identities = 81/272 (29%), Positives = 103/272 (37%), Gaps = 48/272 (17%)
Query: 22 PQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDV 81
P P PR + P S + A RG R+ P+ GP + G LLP
Sbjct: 34 PGPMPRGWILPGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGH--LLP----- 86
Query: 82 LGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLEL-GVDGVGQREVHRVLQEPHP 140
L Q+D L + GE ++ G G E+ G G++ V R
Sbjct: 87 LVQRDGGGLAEHRGRE---GEEGVRA------GGGGTGEVRGGGSPGRQPVGRAAVT--- 134
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 135 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 185
Query: 201 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 255
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 186 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 236
Query: 256 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 287
R + GR P + + L +RVP C P
Sbjct: 237 --RHQPGRD-RPHHHHLELESLRERVP--CEP 263
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 198
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 82 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 140
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 254
AA A RG G G + G R GL E A A G GGG A
Sbjct: 141 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 198
Query: 255 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 292
+ R G+G EG V G+R+ HC R ++
Sbjct: 199 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 235
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 44.3 bits (103), Expect = 1e-04
Identities = 51/152 (33%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 200
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 462 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 512
Query: 201 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 255
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 513 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 563
Query: 256 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 287
R + GR P + + L +RVP C P
Sbjct: 564 --RHQPGRD-RPHHHHLELESLRERVP--CEP 590
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 198
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 409 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 467
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 254
AA A RG G G + G R GL E A A G GGG A
Sbjct: 468 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 525
Query: 255 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 292
+ R G+G EG V G+R+ HC R ++
Sbjct: 526 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 562
Score = 34.3 bits (77), Expect = 0.14
Identities = 36/107 (33%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 115 GAGVLELGVDGVG----QREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAG 170
GAG G V +R V Q+ P Q R R AA GRG G G
Sbjct: 465 GAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 524
Query: 171 AQRAAQAVGAGGRSHVAPAG-ARPARGARAAEHPAVGGRG---HGPG 213
AQ + VG G V G + ARG R A H + G H PG
Sbjct: 525 AQAHRRVVGQG---QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 568
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 44.3 bits (103), Expect = 1e-04
Identities = 65/230 (28%), Positives = 81/230 (35%), Gaps = 34/230 (14%)
Query: 52 GGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLH 111
GGR+ RG A + + LP A G+ + L +A A ++ Q
Sbjct: 264 GGRAAAGLGSQRGAA--LAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQQTE 321
Query: 112 LLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGA 171
G +G G R + P P PQ+ A G GV AGA
Sbjct: 322 REPWGG------EGAGSRFKRLHDESPRPNF--PQS---------LAEGLGVSPQAGARV 364
Query: 172 QRAAQAVGAGGRSHVAPAGARPARGARAA---------EHPAVGGRGHGPGGHGCGGWRW 222
A +AV R+H+ G AR +AA +GGRG G G G W
Sbjct: 365 GEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRG-VCGKCGPGPWDD 423
Query: 223 PGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGAV 272
P RRR PG A G G A A S GRG P G V
Sbjct: 424 PARRR----NPGAAARAKLAGQRAGRARARTGSQVGSR-GRGWGPGAGRV 468
Score = 31.6 bits (70), Expect = 0.88
Identities = 58/215 (26%), Positives = 82/215 (38%), Gaps = 32/215 (14%)
Query: 10 NCKVWVLGGAAPPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGR-------SPLPPAPS 62
+C + + G A P+ QP P +P T W G G R SP P P
Sbjct: 295 HCPLRLAGQA--PRTQPACPAAPRMQQ---TEREPWG-GEGAGSRFKRLHDESPRPNFP- 347
Query: 63 RGPATCMGAALLLPEAHDVLGQ-QDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLEL 121
+ A +G + P+A +G+ ++ + + AHL D GEA +L G ++
Sbjct: 348 QSLAEGLGVS---PQAGARVGEAREAVTTHERAHL-DREGEARARL-------GQAAAQM 396
Query: 122 GVDGVGQREV---HRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV 178
+G G R V + PG A R AAR + AG R V
Sbjct: 397 RREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGA--AARAKLAGQRAGRARARTGSQV 454
Query: 179 GAGGRSHVAPAGARPARGARAAEHP-AVGGRGHGP 212
G+ GR AG P+ G R +P GG P
Sbjct: 455 GSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAP 489
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 44.3 bits (103), Expect = 1e-04
Identities = 65/230 (28%), Positives = 81/230 (35%), Gaps = 34/230 (14%)
Query: 52 GGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLH 111
GGR+ RG A + + LP A G+ + L +A A ++ Q
Sbjct: 264 GGRAAAGLGSQRGAA--LAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQQTE 321
Query: 112 LLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGA 171
G +G G R + P P PQ+ A G GV AGA
Sbjct: 322 REPWGG------EGAGSRFKRLHDESPRPNF--PQS---------LAEGLGVSPQAGARV 364
Query: 172 QRAAQAVGAGGRSHVAPAGARPARGARAA---------EHPAVGGRGHGPGGHGCGGWRW 222
A +AV R+H+ G AR +AA +GGRG G G G W
Sbjct: 365 GEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRG-VCGKCGPGPWDD 423
Query: 223 PGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGAV 272
P RRR PG A G G A A S GRG P G V
Sbjct: 424 PARRR----NPGAAARAKLAGQRAGRARARTGSQVGSR-GRGWGPGAGRV 468
Score = 31.6 bits (70), Expect = 0.88
Identities = 58/215 (26%), Positives = 82/215 (38%), Gaps = 32/215 (14%)
Query: 10 NCKVWVLGGAAPPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGR-------SPLPPAPS 62
+C + + G A P+ QP P +P T W G G R SP P P
Sbjct: 295 HCPLRLAGQA--PRTQPACPAAPRMQQ---TEREPWG-GEGAGSRFKRLHDESPRPNFP- 347
Query: 63 RGPATCMGAALLLPEAHDVLGQ-QDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLEL 121
+ A +G + P+A +G+ ++ + + AHL D GEA +L G ++
Sbjct: 348 QSLAEGLGVS---PQAGARVGEAREAVTTHERAHL-DREGEARARL-------GQAAAQM 396
Query: 122 GVDGVGQREV---HRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV 178
+G G R V + PG A R AAR + AG R V
Sbjct: 397 RREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGA--AARAKLAGQRAGRARARTGSQV 454
Query: 179 GAGGRSHVAPAGARPARGARAAEHP-AVGGRGHGP 212
G+ GR AG P+ G R +P GG P
Sbjct: 455 GSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAP 489
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 43.9 bits (102), Expect = 2e-04
Identities = 54/144 (37%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 125 GVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGV-EAAAGAGAQRAAQAVGAGGR 183
GVG +V V P PG Q GRGARG + G EAA R +V R
Sbjct: 3 GVGGGDVEDVT--PRPGGC--QISGRGARGCNGIPGAAAWEAALPRRRPRRHPSVNPRSR 58
Query: 184 SHVAPAGARPARGARAAEHPA---VGGRGHG---PGGHGCGGWRWPGRRRWRGLAPGEEA 237
+ AG+ RG R E P+ +G RG G PGG GG R RG AP
Sbjct: 59 A----AGSPRTRGRRTEERPSGSRLGDRGRGRALPGGR-LGG-------RGRGRAP---E 103
Query: 238 NEGAVGVGGGSA---AASLARGPR 258
G G G G+A AA ARG R
Sbjct: 104 RVGGRGRGRGTAAPRAAPAARGSR 127
>gi|54873602 hypothetical protein LOC220382 [Homo sapiens]
Length = 426
Score = 42.4 bits (98), Expect = 5e-04
Identities = 52/156 (33%), Positives = 56/156 (35%), Gaps = 23/156 (14%)
Query: 133 RVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGAR 192
R L P A AHG+ A R +AAA A Q + A HV P GA
Sbjct: 127 RPLAAPSAPTVAAPAHGKAA-----PRREASQAAAAASLQSRSLAALFDSLRHV-PGGAE 180
Query: 193 PARGARAAEHPAVGGRGHGPGGHG------CGGWRWPGRR----RWRGLAPGEEANEGAV 242
PA G AA PA G G G GG G G PG R R R L P
Sbjct: 181 PAGGEVAA--PAAGLGGAGTGGAGGDVAGPAGATAIPGARKVPLRARNLPPSFFTEPSRA 238
Query: 243 GVGGGSAAASLARGPRSESGRGLDPAEGAVFITPLG 278
G GG + GP G AE F LG
Sbjct: 239 GGGGCGPS-----GPDVSLGDLEKGAEAVEFFELLG 269
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 42.4 bits (98), Expect = 5e-04
Identities = 42/145 (28%), Positives = 50/145 (34%), Gaps = 26/145 (17%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGG--------RSHVA----- 187
G AAP + G G R G + + G G +A A AG SH
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
Query: 188 ----PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 243
P +RP G GG G G GG G GG G +A A A G
Sbjct: 237 CNHYPGYSRPGAGGGGG---GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
Query: 244 VGGG------SAAASLARGPRSESG 262
GGG SA + PR + G
Sbjct: 294 GGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/133 (28%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 139 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGAR 198
+PG++ P A G G G G G+G GAGG AGA A
Sbjct: 240 YPGYSRPGAGGGG--------GGGGGGGGGSGGGGGGGGAGAGG------AGAGAVAAAA 285
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVG-GGSAAASLARGP 257
AA A GG G G G G+ G+ G + +G GG AASL++
Sbjct: 286 AAAAAAAGGGGGGGYGGSSAGY---------GVLSSPRQQGGGMMMGPGGGGAASLSKAA 336
Query: 258 RSESGRGLDPAEG 270
+ G G
Sbjct: 337 AGSAAGGFQRFAG 349
Score = 30.0 bits (66), Expect = 2.6
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 159 RGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPA-RGARAAEHPAVGGRGHGP 212
+ + A A AG Q+AA +G G A A PA A+ HPA+ GP
Sbjct: 396 QSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP 450
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 42.4 bits (98), Expect = 5e-04
Identities = 42/145 (28%), Positives = 50/145 (34%), Gaps = 26/145 (17%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGG--------RSHVA----- 187
G AAP + G G R G + + G G +A A AG SH
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
Query: 188 ----PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 243
P +RP G GG G G GG G GG G +A A A G
Sbjct: 237 CNHYPGYSRPGAGGGGG---GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
Query: 244 VGGG------SAAASLARGPRSESG 262
GGG SA + PR + G
Sbjct: 294 GGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/133 (28%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 139 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGAR 198
+PG++ P A G G G G G+G GAGG AGA A
Sbjct: 240 YPGYSRPGAGGGG--------GGGGGGGGGSGGGGGGGGAGAGG------AGAGAVAAAA 285
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVG-GGSAAASLARGP 257
AA A GG G G G G+ G+ G + +G GG AASL++
Sbjct: 286 AAAAAAAGGGGGGGYGGSSAGY---------GVLSSPRQQGGGMMMGPGGGGAASLSKAA 336
Query: 258 RSESGRGLDPAEG 270
+ G G
Sbjct: 337 AGSAAGGFQRFAG 349
Score = 30.0 bits (66), Expect = 2.6
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 159 RGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPA-RGARAAEHPAVGGRGHGP 212
+ + A A AG Q+AA +G G A A PA A+ HPA+ GP
Sbjct: 396 QSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP 450
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 42.4 bits (98), Expect = 5e-04
Identities = 42/145 (28%), Positives = 50/145 (34%), Gaps = 26/145 (17%)
Query: 141 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGG--------RSHVA----- 187
G AAP + G G R G + + G G +A A AG SH
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
Query: 188 ----PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 243
P +RP G GG G G GG G GG G +A A A G
Sbjct: 237 CNHYPGYSRPGAGGGGG---GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
Query: 244 VGGG------SAAASLARGPRSESG 262
GGG SA + PR + G
Sbjct: 294 GGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/133 (28%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 139 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGAR 198
+PG++ P A G G G G G+G GAGG AGA A
Sbjct: 240 YPGYSRPGAGGGG--------GGGGGGGGGSGGGGGGGGAGAGG------AGAGAVAAAA 285
Query: 199 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVG-GGSAAASLARGP 257
AA A GG G G G G+ G+ G + +G GG AASL++
Sbjct: 286 AAAAAAAGGGGGGGYGGSSAGY---------GVLSSPRQQGGGMMMGPGGGGAASLSKAA 336
Query: 258 RSESGRGLDPAEG 270
+ G G
Sbjct: 337 AGSAAGGFQRFAG 349
Score = 30.0 bits (66), Expect = 2.6
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 159 RGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPA-RGARAAEHPAVGGRGHGP 212
+ + A A AG Q+AA +G G A A PA A+ HPA+ GP
Sbjct: 396 QSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP 450
>gi|239748304 PREDICTED: hypothetical protein XP_002346608 [Homo
sapiens]
Length = 285
Score = 42.0 bits (97), Expect = 7e-04
Identities = 59/171 (34%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 121 LGVDGVG-QREVHRVLQEPHPGHAAPQAHGR--GARGIHAARGR--GVEAAAGAGAQR-- 173
LG G G Q EV VL E H P A GR ARG AAR R VE ++R
Sbjct: 92 LGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARG-GAARARLLAVEVRVAVQSERHR 150
Query: 174 -------------AAQAVGAGGRSHVAPAGARPARGARAAE----HPAVGGRGHGPGGHG 216
AAQA G R H +P RPA GAR + PA G G HG
Sbjct: 151 HVGAVQLVPAPRQAAQAADTGPR-HASPGARRPAPGARRSRPRLLRPA-SVWNEGDGSHG 208
Query: 217 CGGWRWPGRRRWRGLAP-GEEANE----GAVGVGGGSAAASLARGPRSESG 262
R +WR +P G A E AV G + + PR +SG
Sbjct: 209 MFLGTPHFRCQWRRHSPRGPRARECMALKAVIAGPQRSQEEKVKHPRGQSG 259
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,957,920
Number of Sequences: 37866
Number of extensions: 1051867
Number of successful extensions: 12410
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 946
Number of HSP's that attempted gapping in prelim test: 8628
Number of HSP's gapped (non-prelim): 3973
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.