Guide to the Human Genome
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Name: LOC100293459 Sequence: fasta or formatted (103aa) NCBI GI: 239755083
Description:

PREDICTED: similar to hCG1984907

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         10           1
 C cysteine            4.9          5           1
 D aspartate           2.9          3           1
 E glutamate           5.8          6           1
 F phenylalanine       4.9          5           1
 G glycine             4.9          5           1
 H histidine           4.9          5           1
 I isoleucine          1.9          2           1
 K lysine              1.9          2           1
 L leucine             8.7          9           2
 M methionine          4.9          5           1
 N asparagine          1.9          2           1
 P proline             9.7         10           1
 Q glutamine           3.9          4           1
 R arginine            5.8          6           1
 S serine             10.7         11           1
 T threonine           4.9          5           1
 V valine              2.9          3           1
 W tryptophan          1.9          2           1
 Y tyrosine            2.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1984907 
LOC730413             0.449   PREDICTED: hypothetical protein 
LOC730413             0.449   PREDICTED: hypothetical protein 
LOC100127894          0.217   PREDICTED: hypothetical protein 
STXBP5L               0.025   syntaxin binding protein 5-like 
ADAM33                0.015   ADAM metallopeptidase domain 33 isoform alpha prepro...
ADAM33                0.015   ADAM metallopeptidase domain 33 isoform beta preprop...
VEZF1                 0.010   zinc finger protein 161 
LOC728417             0.010   PREDICTED: hypothetical protein 
LOC728417             0.010   PREDICTED: hypothetical protein 
LOC728417             0.010   PREDICTED: hypothetical protein isoform 1 
ADAM2                 0.010   ADAM metallopeptidase domain 2 proprotein 
CENPI                 0.010   centromere protein I 
RNF212                0.010   ring finger protein 212 isoform a 
KRTAP10-8             0.005   keratin associated protein 10-8 
LOC100131696          0.005   PREDICTED: keratin associated protein 
LOC100131696          0.005   PREDICTED: keratin associated protein 
LOC100288060          0.005   PREDICTED: hypothetical protein XP_002343557 
ZNF496                0.005   zinc finger protein 496 
LOC644893             0.005   PREDICTED: hypothetical protein 
LOC644893             0.005   PREDICTED: hypothetical protein 
ZNF837                0.005   zinc finger protein 837 isoform 1 
ZNF837                0.005   zinc finger protein 837 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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