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Search of human proteins with 239754860
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo
sapiens]
(281 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo sa... 580 e-166
gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo ... 329 2e-90
gi|239743536 PREDICTED: hypothetical protein XP_002342871 [Homo ... 329 2e-90
gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens] 162 4e-40
gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo ... 162 4e-40
gi|239751260 PREDICTED: hypothetical protein XP_002347772 [Homo ... 161 7e-40
gi|223890243 ribosomal protein L10 [Homo sapiens] 121 6e-28
gi|18152783 ribosomal protein L10-like protein [Homo sapiens] 120 2e-27
gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens] 117 1e-26
gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens] 117 1e-26
gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo sap... 117 1e-26
gi|169173188 PREDICTED: similar to hCG1644362 [Homo sapiens] 108 7e-24
gi|239749350 PREDICTED: similar to hCG1644362 [Homo sapiens] 108 7e-24
gi|239743486 PREDICTED: hypothetical protein LOC645960 [Homo sap... 108 7e-24
gi|11056061 thymosin, beta 4 [Homo sapiens] 68 1e-11
gi|34013530 thymosin-like 3 [Homo sapiens] 66 4e-11
gi|4759244 thymosin, beta 4, Y chromosome [Homo sapiens] 63 3e-10
gi|167555119 thymosin beta15b [Homo sapiens] 54 2e-07
gi|11496273 thymosin-like 8 [Homo sapiens] 54 2e-07
gi|10863895 thymosin, beta 10 [Homo sapiens] 52 4e-07
gi|239754119 PREDICTED: hypothetical protein [Homo sapiens] 35 0.074
gi|239748631 PREDICTED: hypothetical protein XP_002346748 [Homo ... 35 0.074
gi|239742658 PREDICTED: hypothetical protein XP_002342605 [Homo ... 35 0.074
gi|28269693 xylosyltransferase I [Homo sapiens] 35 0.096
gi|169183848 PREDICTED: similar to thymosin, beta 10 [Homo sapiens] 34 0.13
gi|169179692 PREDICTED: similar to thymosin, beta 10 [Homo sapiens] 34 0.13
gi|169180100 PREDICTED: similar to thymosin, beta 10 [Homo sapiens] 34 0.13
gi|4758392 forkhead box D1 [Homo sapiens] 32 0.81
gi|83035136 F-box protein 31 [Homo sapiens] 31 1.4
gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo ... 30 1.8
>gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo
sapiens]
Length = 281
Score = 580 bits (1496), Expect = e-166
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MVRQGRSPQLASGAALREVGRRVGGSGLGPPRQCRRRVRRDSRALSWAWVAGGARNGPGE 60
MVRQGRSPQLASGAALREVGRRVGGSGLGPPRQCRRRVRRDSRALSWAWVAGGARNGPGE
Sbjct: 1 MVRQGRSPQLASGAALREVGRRVGGSGLGPPRQCRRRVRRDSRALSWAWVAGGARNGPGE 60
Query: 61 LEAADSGSAGVGTSGVCLGFEKAREGSRLCDRPVLGPPRRVGIACSLFLRFPGGGHCSAS 120
LEAADSGSAGVGTSGVCLGFEKAREGSRLCDRPVLGPPRRVGIACSLFLRFPGGGHCSAS
Sbjct: 61 LEAADSGSAGVGTSGVCLGFEKAREGSRLCDRPVLGPPRRVGIACSLFLRFPGGGHCSAS 120
Query: 121 SVTTSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVH 180
SVTTSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVH
Sbjct: 121 SVTTSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVH 180
Query: 181 GLFLVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSIC 240
GLFLVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSIC
Sbjct: 181 GLFLVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSIC 240
Query: 241 TKLQNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 281
TKLQNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE
Sbjct: 241 TKLQNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 281
>gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo
sapiens]
Length = 158
Score = 329 bits (843), Expect = 2e-90
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL 184
SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL
Sbjct: 2 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL 61
Query: 185 VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ 244
VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ
Sbjct: 62 VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ 121
Query: 245 NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 281
NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE
Sbjct: 122 NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
>gi|239743536 PREDICTED: hypothetical protein XP_002342871 [Homo
sapiens]
Length = 158
Score = 329 bits (843), Expect = 2e-90
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL 184
SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL
Sbjct: 2 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL 61
Query: 185 VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ 244
VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ
Sbjct: 62 VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ 121
Query: 245 NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 281
NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE
Sbjct: 122 NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
>gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens]
Length = 186
Score = 162 bits (409), Expect = 4e-40
Identities = 90/131 (68%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 151 PQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPR 210
P E E+E +CAMAANSSFL V LFL WVALR LGDRPFKC FMSLTLHYP+
Sbjct: 59 PFSGAEHEEREVGRTWCAMAANSSFLVRVRRLFLGWVALRDLGDRPFKCMFMSLTLHYPQ 118
Query: 211 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 269
CRL+T + GKPQGTVARVHIGQV S+ TKLQNK+ VIE CRAKFK G QKI IS
Sbjct: 119 CRLQT---DSLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 175
Query: 270 KKWGFTKFNVD 280
KKW FTKF VD
Sbjct: 176 KKWCFTKFKVD 186
>gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo
sapiens]
Length = 186
Score = 162 bits (409), Expect = 4e-40
Identities = 90/131 (68%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 151 PQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPR 210
P E E+E +CAMAANSSFL V LFL WVALR LGDRPFKC FMSLTLHYP+
Sbjct: 59 PFSGAEHEEREVGRTWCAMAANSSFLVRVRRLFLGWVALRDLGDRPFKCMFMSLTLHYPQ 118
Query: 211 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 269
CRL+T + GKPQGTVARVHIGQV S+ TKLQNK+ VIE CRAKFK G QKI IS
Sbjct: 119 CRLQT---DSLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 175
Query: 270 KKWGFTKFNVD 280
KKW FTKF VD
Sbjct: 176 KKWCFTKFKVD 186
>gi|239751260 PREDICTED: hypothetical protein XP_002347772 [Homo
sapiens]
Length = 180
Score = 161 bits (407), Expect = 7e-40
Identities = 88/124 (70%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
Query: 160 QEKQAG--FCAMAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGI 217
+E++ G +CAMAANSSFL V LFL WVALR LGDRPFKC FMSLTLHYP+CRL+T
Sbjct: 60 EEREVGRTWCAMAANSSFLVRVRRLFLGWVALRDLGDRPFKCMFMSLTLHYPQCRLQT-- 117
Query: 218 QGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTK 276
+ GKPQGTVARVHIGQV S+ TKLQNK+ VIE CRAKFK G QKI ISKKW FTK
Sbjct: 118 -DSLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRISKKWCFTK 176
Query: 277 FNVD 280
F VD
Sbjct: 177 FKVD 180
>gi|223890243 ribosomal protein L10 [Homo sapiens]
Length = 214
Score = 121 bits (304), Expect = 6e-28
Identities = 61/71 (85%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 212 RLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISK 270
RL+TG++GAFGKPQGTVARVHIGQV SI TKLQNKEHVIEA RAKFKFPG QKIHISK
Sbjct: 110 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISK 169
Query: 271 KWGFTKFNVDE 281
KWGFTKFN DE
Sbjct: 170 KWGFTKFNADE 180
>gi|18152783 ribosomal protein L10-like protein [Homo sapiens]
Length = 214
Score = 120 bits (300), Expect = 2e-27
Identities = 60/71 (84%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 212 RLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISK 270
RL+TG++GAFGKPQGTVARVHIGQV SI TKLQN+EHVIEA RAKFKFPG QKIHISK
Sbjct: 110 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISK 169
Query: 271 KWGFTKFNVDE 281
KWGFTKFN DE
Sbjct: 170 KWGFTKFNADE 180
>gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens]
Length = 150
Score = 117 bits (292), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 211 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 269
CRL+TG+Q AFGKPQGTVARVHIGQV I TKLQNKEHVI A R FKFPGHQK+HIS
Sbjct: 45 CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
Query: 270 KKWGFTKFNVDE 281
KKWGFTKFN DE
Sbjct: 105 KKWGFTKFNADE 116
>gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]
Length = 150
Score = 117 bits (292), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 211 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 269
CRL+TG+Q AFGKPQGTVARVHIGQV I TKLQNKEHVI A R FKFPGHQK+HIS
Sbjct: 45 CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
Query: 270 KKWGFTKFNVDE 281
KKWGFTKFN DE
Sbjct: 105 KKWGFTKFNADE 116
>gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo
sapiens]
Length = 150
Score = 117 bits (292), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 211 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 269
CRL+TG+Q AFGKPQGTVARVHIGQV I TKLQNKEHVI A R FKFPGHQK+HIS
Sbjct: 45 CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
Query: 270 KKWGFTKFNVDE 281
KKWGFTKFN DE
Sbjct: 105 KKWGFTKFNADE 116
>gi|169173188 PREDICTED: similar to hCG1644362 [Homo sapiens]
Length = 226
Score = 108 bits (269), Expect = 7e-24
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 211 CRLET--GIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIH 267
C +E I+GAF KPQG VARVHIGQV SICTKLQNKEHVIEA C+A FKFPG Q IH
Sbjct: 20 CSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNIH 79
Query: 268 ISKKWGFTKFNVDE 281
S+KW FTKF+VDE
Sbjct: 80 FSEKWDFTKFSVDE 93
>gi|239749350 PREDICTED: similar to hCG1644362 [Homo sapiens]
Length = 226
Score = 108 bits (269), Expect = 7e-24
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 211 CRLET--GIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIH 267
C +E I+GAF KPQG VARVHIGQV SICTKLQNKEHVIEA C+A FKFPG Q IH
Sbjct: 20 CSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNIH 79
Query: 268 ISKKWGFTKFNVDE 281
S+KW FTKF+VDE
Sbjct: 80 FSEKWDFTKFSVDE 93
>gi|239743486 PREDICTED: hypothetical protein LOC645960 [Homo
sapiens]
Length = 226
Score = 108 bits (269), Expect = 7e-24
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 211 CRLET--GIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIH 267
C +E I+GAF KPQG VARVHIGQV SICTKLQNKEHVIEA C+A FKFPG Q IH
Sbjct: 20 CSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNIH 79
Query: 268 ISKKWGFTKFNVDE 281
S+KW FTKF+VDE
Sbjct: 80 FSEKWDFTKFSVDE 93
>gi|11056061 thymosin, beta 4 [Homo sapiens]
Length = 44
Score = 67.8 bits (164), Expect = 1e-11
Identities = 34/41 (82%), Positives = 35/41 (85%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAG 165
SDK +M EIEKF KSKLKKTE QEKNP PSKE IEQEKQAG
Sbjct: 2 SDKPDMAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQAG 42
>gi|34013530 thymosin-like 3 [Homo sapiens]
Length = 44
Score = 65.9 bits (159), Expect = 4e-11
Identities = 33/41 (80%), Positives = 34/41 (82%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAG 165
SDK +M EIEKF K KLKKTE QEKNP PSKE IEQEKQAG
Sbjct: 2 SDKPDMAEIEKFDKPKLKKTETQEKNPLPSKETIEQEKQAG 42
>gi|4759244 thymosin, beta 4, Y chromosome [Homo sapiens]
Length = 44
Score = 63.2 bits (152), Expect = 3e-10
Identities = 32/41 (78%), Positives = 33/41 (80%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAG 165
SDK M EIEKF KSKLKKTE QEKNP SKE IEQE+QAG
Sbjct: 2 SDKPGMAEIEKFDKSKLKKTETQEKNPLSSKETIEQERQAG 42
>gi|167555119 thymosin beta15b [Homo sapiens]
Length = 45
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 163
SDK ++ E+EKF +SKLKKT +EKN PSKE I+QEK+
Sbjct: 2 SDKPDLSEVEKFDRSKLKKTNTEEKNTLPSKETIQQEKE 40
>gi|11496273 thymosin-like 8 [Homo sapiens]
Length = 45
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 163
SDK ++ E+EKF +SKLKKT +EKN PSKE I+QEK+
Sbjct: 2 SDKPDLSEVEKFDRSKLKKTNTEEKNTLPSKETIQQEKE 40
>gi|10863895 thymosin, beta 10 [Homo sapiens]
Length = 44
Score = 52.4 bits (124), Expect = 4e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQA 164
+DK +M EI F K+KLKKTE QEKN P+KE IEQEK++
Sbjct: 2 ADKPDMGEIASFDKAKLKKTETQEKNTLPTKETIEQEKRS 41
>gi|239754119 PREDICTED: hypothetical protein [Homo sapiens]
Length = 45
Score = 35.0 bits (79), Expect = 0.074
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 163
S K +M ++ KF + KLKK +EKN +E I+QEK+
Sbjct: 2 SYKPDMSKVGKFDREKLKKINNKEKNTLLPQETIQQEKE 40
>gi|239748631 PREDICTED: hypothetical protein XP_002346748 [Homo
sapiens]
Length = 45
Score = 35.0 bits (79), Expect = 0.074
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 163
S K +M ++ KF + KLKK +EKN +E I+QEK+
Sbjct: 2 SYKPDMSKVGKFDREKLKKINNKEKNTLLPQETIQQEKE 40
>gi|239742658 PREDICTED: hypothetical protein XP_002342605 [Homo
sapiens]
Length = 45
Score = 35.0 bits (79), Expect = 0.074
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 163
S K +M ++ KF + KLKK +EKN +E I+QEK+
Sbjct: 2 SYKPDMSKVGKFDREKLKKINNKEKNTLLPQETIQQEKE 40
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 34.7 bits (78), Expect = 0.096
Identities = 28/78 (35%), Positives = 30/78 (38%)
Query: 10 LASGAALREVGRRVGGSGLGPPRQCRRRVRRDSRALSWAWVAGGARNGPGELEAADSGSA 69
L SGA R G VGG PP RR RRD A A GG G G A
Sbjct: 38 LDSGAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARA 97
Query: 70 GVGTSGVCLGFEKAREGS 87
G G G + A G+
Sbjct: 98 RGGGPGEPRGQQPASRGA 115
>gi|169183848 PREDICTED: similar to thymosin, beta 10 [Homo sapiens]
Length = 43
Score = 34.3 bits (77), Expect = 0.13
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 127 KSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 162
K +++EI K+KLK TEMQ KN +KE EQEK
Sbjct: 4 KLDLEEIASLDKAKLKATEMQ-KNTLMTKETTEQEK 38
>gi|169179692 PREDICTED: similar to thymosin, beta 10 [Homo sapiens]
Length = 43
Score = 34.3 bits (77), Expect = 0.13
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 127 KSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 162
K +++EI K+KLK TEMQ KN +KE EQEK
Sbjct: 4 KLDLEEIASLDKAKLKATEMQ-KNTLMTKETTEQEK 38
>gi|169180100 PREDICTED: similar to thymosin, beta 10 [Homo sapiens]
Length = 43
Score = 34.3 bits (77), Expect = 0.13
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 127 KSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 162
K +++EI K+KLK TEMQ KN +KE EQEK
Sbjct: 4 KLDLEEIASLDKAKLKATEMQ-KNTLMTKETTEQEK 38
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 31.6 bits (70), Expect = 0.81
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 17/89 (19%)
Query: 24 GGSGLGPPRQCRRRVR--------------RDSRALSWAWVAGGARNGPGELEAADSGSA 69
GG L P Q RRR R D + A AGG+ PG AA +G+
Sbjct: 42 GGPRLAVPAQRRRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAG 101
Query: 70 GVGTSGVCLGFEKAREGSRLCDRPVLGPP 98
G G G G A G++ P++ PP
Sbjct: 102 GGGGGGGAGGGGSAGSGAK---NPLVKPP 127
>gi|83035136 F-box protein 31 [Homo sapiens]
Length = 539
Score = 30.8 bits (68), Expect = 1.4
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 28/65 (43%)
Query: 27 GLGPPRQCRRRVRRDSRALSWAWVAGGARNGPGELEAADS------------GSAGVGTS 74
G+GP R CRRR + R GP E AADS SAGVG
Sbjct: 9 GVGPSRGCRRRQQ---------------RRGPAETAAADSEPDTDPEEERIEASAGVG-G 52
Query: 75 GVCLG 79
G+C G
Sbjct: 53 GLCAG 57
>gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo
sapiens]
Length = 684
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 25 GSGLGPPRQCRRRVRRDSRALSWAWVAGGARNGPGELEAADSGSAGVGTSGVCLGFEKAR 84
G+G P R RV+ +SW W+A G G + AG+G G G E R
Sbjct: 463 GAGKVSPLGLRARVKIAGTPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLR 522
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,536,741
Number of Sequences: 37866
Number of extensions: 621963
Number of successful extensions: 2249
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 2196
Number of HSP's gapped (non-prelim): 77
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.