LOC390998 7229

Name: LOC390998	Sequence: fasta or formatted (150aa)		NCBI GI: 169162466
Description: PREDICTED: similar to hCG1644589		Referenced in: Ribosomes
Other entries for this name: alt mRNA [150aa] PREDICTED: hypothetical protein LOC390998 alt mRNA [150aa] PREDICTED: similar to hCG1644589
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.7 19 3 C cysteine 1.3 2 1 D aspartate 2.7 4 1 E glutamate 4.0 6 1 F phenylalanine 4.7 7 1 G glycine 8.7 13 1 H histidine 4.7 7 1 I isoleucine 4.0 6 1 K lysine 7.3 11 2 L leucine 5.3 8 1 M methionine 2.0 3 1 N asparagine 2.0 3 1 P proline 8.7 13 1 Q glutamine 7.3 11 1 R arginine 5.3 8 3 S serine 4.7 7 1 T threonine 4.0 6 1 V valine 8.0 12 2 W tryptophan 1.3 2 1 Y tyrosine 1.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1644589 LOC390998 1.000 PREDICTED: similar to hCG1644589 LOC390998 1.000 PREDICTED: hypothetical protein LOC390998 RPL10 0.531 ribosomal protein L10 RPL10L 0.524 ribosomal protein L10-like protein LOC100293539 0.322 PREDICTED: similar to ribosomal protein 10 LOC100290275 0.322 PREDICTED: hypothetical protein XP_002347030 LOC100289349 0.322 PREDICTED: hypothetical protein XP_002342871 LOC645960 0.308 PREDICTED: similar to hCG1644362 LOC645960 0.308 PREDICTED: similar to hCG1644362 LOC645960 0.308 PREDICTED: hypothetical protein LOC645960 LOC100293009 0.220 PREDICTED: similar to hCG1643102 LOC100291445 0.220 PREDICTED: hypothetical protein XP_002347772 LOC100287009 0.220 PREDICTED: hypothetical protein XP_002343545 PPM1E 0.028 protein phosphatase 1E LOC100292629 0.021 PREDICTED: hypothetical protein LOC100289960 0.021 PREDICTED: hypothetical protein XP_002346853 LOC100286905 0.021 PREDICTED: hypothetical protein XP_002342691 ZNF628 0.021 zinc finger protein 628 SEMA6B 0.021 semaphorin 6B precursor WFS1 0.021 wolframin WFS1 0.021 wolframin C1orf229 0.017 hypothetical protein LOC388759 QKI 0.017 quaking homolog, KH domain RNA binding isoform HQK-7... QKI 0.017 quaking homolog, KH domain RNA binding isoform HQK-7... QKI 0.017 quaking homolog, KH domain RNA binding isoform HQK-6... QKI 0.017 quaking homolog, KH domain RNA binding isoform HQK-5... SEC24D 0.017 Sec24-related protein D ZNF446 0.017 zinc finger protein 446 MTX1 0.014 metaxin 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.