Guide to the Human Genome
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Name: LOC100131433 Sequence: fasta or formatted (43aa) NCBI GI: 169180100
Description:

PREDICTED: similar to thymosin, beta 10

Not currently referenced in the text

Other entries for this name:
alt mRNA {43aa} PREDICTED: similar to thymosin, beta 10
alt mRNA {43aa} PREDICTED: similar to thymosin, beta 10
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3          4           1
 C cysteine            0.0          0           0
 D aspartate           4.7          2           1
 E glutamate          16.3          7           2
 F phenylalanine       0.0          0           0
 G glycine             0.0          0           0
 H histidine           2.3          1           1
 I isoleucine          4.7          2           1
 K lysine             16.3          7           1
 L leucine            11.6          5           1
 M methionine          7.0          3           1
 N asparagine          2.3          1           1
 P proline             0.0          0           0
 Q glutamine           4.7          2           1
 R arginine            0.0          0           0
 S serine              7.0          3           1
 T threonine          11.6          5           2
 V valine              0.0          0           0
 W tryptophan          2.3          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to thymosin, beta 10 
LOC100131433          1.000   PREDICTED: similar to thymosin, beta 10 
LOC100131433          1.000   PREDICTED: similar to thymosin, beta 10 
TMSB10                0.500   thymosin, beta 10 
TMSB4X                0.274   thymosin, beta 4 
TMSL3                 0.258   thymosin-like 3 
TMSB15B               0.226   thymosin beta15b 
TMSB15A               0.226   thymosin-like 8 
TMSB4Y                0.210   thymosin, beta 4, Y chromosome 
LOC100290275          0.177   PREDICTED: hypothetical protein XP_002347030 
LOC100289349          0.177   PREDICTED: hypothetical protein XP_002342871 
LOC100292284          0.161   PREDICTED: hypothetical protein 
LOC100290455          0.161   PREDICTED: hypothetical protein XP_002346748 
LOC100287135          0.161   PREDICTED: hypothetical protein XP_002342605 
LOC100293539          0.145   PREDICTED: similar to ribosomal protein 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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