Guide to the Human Genome
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Name: RPL10 Sequence: fasta or formatted (214aa) NCBI GI: 223890243
Description:

ribosomal protein L10

Referenced in:

Ribosomes
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         16           2
 C cysteine            3.7          8           1
 D aspartate           4.7         10           1
 E glutamate           4.7         10           1
 F phenylalanine       5.1         11           1
 G glycine             7.9         17           1
 H histidine           3.7          8           1
 I isoleucine          6.5         14           1
 K lysine             10.7         23           2
 L leucine             5.6         12           1
 M methionine          3.3          7           1
 N asparagine          2.8          6           1
 P proline             5.1         11           1
 Q glutamine           2.8          6           1
 R arginine           10.3         22           2
 S serine              4.2          9           2
 T threonine           1.9          4           1
 V valine              5.6         12           1
 W tryptophan          0.9          2           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L10 
RPL10L                0.955   ribosomal protein L10-like protein 
LOC390998             0.359   PREDICTED: similar to hCG1644589 
LOC390998             0.359   PREDICTED: similar to hCG1644589 
LOC390998             0.359   PREDICTED: hypothetical protein LOC390998 
LOC645960             0.248   PREDICTED: similar to hCG1644362 
LOC645960             0.248   PREDICTED: similar to hCG1644362 
LOC645960             0.248   PREDICTED: hypothetical protein LOC645960 
LOC100293539          0.227   PREDICTED: similar to ribosomal protein 10 
LOC100290275          0.227   PREDICTED: hypothetical protein XP_002347030 
LOC100289349          0.227   PREDICTED: hypothetical protein XP_002342871 
LOC100293009          0.168   PREDICTED: similar to hCG1643102 
LOC100291445          0.168   PREDICTED: hypothetical protein XP_002347772 
LOC100287009          0.168   PREDICTED: hypothetical protein XP_002343545 
PPM1E                 0.007   protein phosphatase 1E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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