Guide to the Human Genome
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Name: TMSB10 Sequence: fasta or formatted (44aa) NCBI GI: 10863895
Description:

thymosin, beta 10

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8          3           1
 C cysteine            0.0          0           0
 D aspartate           6.8          3           1
 E glutamate          15.9          7           1
 F phenylalanine       2.3          1           1
 G glycine             2.3          1           1
 H histidine           0.0          0           0
 I isoleucine          6.8          3           1
 K lysine             18.2          8           2
 L leucine             4.5          2           1
 M methionine          4.5          2           1
 N asparagine          2.3          1           1
 P proline             4.5          2           1
 Q glutamine           4.5          2           1
 R arginine            2.3          1           1
 S serine              6.8          3           1
 T threonine          11.4          5           1
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thymosin, beta 10 
TMSB4X                0.688   thymosin, beta 4 
TMSL3                 0.688   thymosin-like 3 
TMSB15B               0.609   thymosin beta15b 
TMSB15A               0.609   thymosin-like 8 
TMSB4Y                0.578   thymosin, beta 4, Y chromosome 
LOC100131433          0.484   PREDICTED: similar to thymosin, beta 10 
LOC100131433          0.484   PREDICTED: similar to thymosin, beta 10 
LOC100131433          0.484   PREDICTED: similar to thymosin, beta 10 
LOC100290275          0.453   PREDICTED: hypothetical protein XP_002347030 
LOC100289349          0.453   PREDICTED: hypothetical protein XP_002342871 
LOC100293539          0.422   PREDICTED: similar to ribosomal protein 10 
LOC100292284          0.375   PREDICTED: hypothetical protein 
LOC100290455          0.375   PREDICTED: hypothetical protein XP_002346748 
LOC100287135          0.375   PREDICTED: hypothetical protein XP_002342605 
TSSK4                 0.031   testis-specific serine kinase 4 
MXD4                  0.031   MAD4 
HDAC1                 0.016   histone deacetylase 1 
PRUNE2                0.016   prune homolog 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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