Guide to the Human Genome
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Name: TMSB15A Sequence: fasta or formatted (45aa) NCBI GI: 11496273
Description:

thymosin-like 8

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            2.2          1           1
 D aspartate           6.7          3           1
 E glutamate          15.6          7           2
 F phenylalanine       2.2          1           1
 G glycine             0.0          0           0
 H histidine           0.0          0           0
 I isoleucine          2.2          1           1
 K lysine             17.8          8           2
 L leucine             6.7          3           1
 M methionine          2.2          1           1
 N asparagine          4.4          2           1
 P proline             4.4          2           1
 Q glutamine           6.7          3           2
 R arginine            2.2          1           1
 S serine             11.1          5           1
 T threonine          11.1          5           1
 V valine              4.4          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thymosin-like 8 
TMSB15B               1.000   thymosin beta15b 
TMSB4X                0.672   thymosin, beta 4 
TMSL3                 0.657   thymosin-like 3 
TMSB10                0.582   thymosin, beta 10 
TMSB4Y                0.582   thymosin, beta 4, Y chromosome 
LOC100292284          0.567   PREDICTED: hypothetical protein 
LOC100290455          0.567   PREDICTED: hypothetical protein XP_002346748 
LOC100287135          0.567   PREDICTED: hypothetical protein XP_002342605 
LOC100290275          0.448   PREDICTED: hypothetical protein XP_002347030 
LOC100289349          0.448   PREDICTED: hypothetical protein XP_002342871 
LOC100293539          0.433   PREDICTED: similar to ribosomal protein 10 
LOC100131433          0.209   PREDICTED: similar to thymosin, beta 10 
LOC100131433          0.209   PREDICTED: similar to thymosin, beta 10 
LOC100131433          0.209   PREDICTED: similar to thymosin, beta 10 
EFCAB6                0.030   CAP-binding protein complex interacting protein 1 is...
EFCAB6                0.030   CAP-binding protein complex interacting protein 1 is...
WDR87                 0.030   NYD-SP11 protein 
DDX31                 0.030   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2 ...
DDX31                 0.030   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ...
ODF2                  0.015   outer dense fiber of sperm tails 2 isoform 2 
ODF2                  0.015   outer dense fiber of sperm tails 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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