Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR56A3 Sequence: fasta or formatted (315aa) NCBI GI: 119120794
Description:

olfactory receptor, family 56, subfamily A, member 3

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         21           2
 C cysteine            3.8         12           1
 D aspartate           3.2         10           2
 E glutamate           1.9          6           1
 F phenylalanine       5.7         18           2
 G glycine             3.2         10           2
 H histidine           3.2         10           2
 I isoleucine          7.6         24           2
 K lysine              3.2         10           3
 L leucine            17.5         55           2
 M methionine          3.8         12           1
 N asparagine          3.5         11           1
 P proline             4.4         14           1
 Q glutamine           2.5          8           1
 R arginine            4.1         13           1
 S serine              7.0         22           1
 T threonine           6.3         20           2
 V valine              7.6         24           2
 W tryptophan          1.6          5           1
 Y tyrosine            3.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 56, subfamily A, member ... 
OR56A4                0.773   olfactory receptor, family 56, subfamily A, member 4...
OR56A1                0.773   olfactory receptor, family 56, subfamily A, member 1...
OR56A5                0.731   olfactory receptor, family 56, subfamily A, member ...
OR56A5                0.731   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A5                0.731   PREDICTED: olfactory receptor, family 56, subfamily ...
OR56A5                0.731   PREDICTED: olfactory receptor, family 56, subfamily...
OR56B4                0.509   olfactory receptor, family 56, subfamily B, member 4...
OR56B1                0.488   olfactory receptor, family 56, subfamily B, member 1...
OR52K2                0.338   olfactory receptor, family 52, subfamily K, member 2...
OR52B2                0.335   olfactory receptor, family 52, subfamily B, member 2...
OR52K1                0.333   olfactory receptor, family 52, subfamily K, member 1...
OR52N4                0.330   olfactory receptor, family 52, subfamily N, member ...
OR52E4                0.327   olfactory receptor, family 52, subfamily E, member 4...
OR52L1                0.325   olfactory receptor, family 52, subfamily L, member ...
OR51L1                0.322   olfactory receptor, family 51, subfamily L, member 1...
OR52N2                0.322   olfactory receptor, family 52, subfamily N, member 2...
OR52E8                0.322   olfactory receptor, family 52, subfamily E, member 8...
OR52N1                0.320   olfactory receptor, family 52, subfamily N, member 1...
OR52H1                0.320   olfactory receptor, family 52, subfamily H, member 1...
OR51E1                0.319   olfactory receptor, family 51, subfamily E, member ...
OR52J3                0.319   olfactory receptor, family 52, subfamily J, member ...
OR51G1                0.317   olfactory receptor, family 51, subfamily G, member 1...
OR52E2                0.317   olfactory receptor, family 52, subfamily E, member 2...
OR52D1                0.312   olfactory receptor, family 52, subfamily D, member 1...
OR51M1                0.312   olfactory receptor, family 51, subfamily M, member 1...
OR51G2                0.310   olfactory receptor, family 51, subfamily G, member 2...
OR51I2                0.305   olfactory receptor, family 51, subfamily I, member 2...
OR52M1                0.302   olfactory receptor, family 52, subfamily M, member 1...
OR52N5                0.302   olfactory receptor, family 52, subfamily N, member 5...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press