Guide to the Human Genome
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Name: OR56B4 Sequence: fasta or formatted (319aa) NCBI GI: 52353266
Description:

olfactory receptor, family 56, subfamily B, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         26           2
 C cysteine            3.4         11           1
 D aspartate           2.8          9           2
 E glutamate           2.5          8           1
 F phenylalanine       4.7         15           2
 G glycine             4.4         14           1
 H histidine           4.4         14           1
 I isoleucine         10.7         34           3
 K lysine              3.1         10           2
 L leucine            16.6         53           2
 M methionine          3.4         11           1
 N asparagine          2.8          9           1
 P proline             4.4         14           2
 Q glutamine           3.1         10           1
 R arginine            2.8          9           1
 S serine              7.2         23           2
 T threonine           4.7         15           2
 V valine              6.6         21           2
 W tryptophan          1.3          4           1
 Y tyrosine            2.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 56, subfamily B, member 4... 
OR56B1                0.640   olfactory receptor, family 56, subfamily B, member 1...
OR56A1                0.507   olfactory receptor, family 56, subfamily A, member 1...
OR56A3                0.507   olfactory receptor, family 56, subfamily A, member ...
OR56A4                0.507   olfactory receptor, family 56, subfamily A, member 4...
OR56A5                0.494   olfactory receptor, family 56, subfamily A, member ...
OR56A5                0.494   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A5                0.494   PREDICTED: olfactory receptor, family 56, subfamily ...
OR56A5                0.494   PREDICTED: olfactory receptor, family 56, subfamily...
OR51G1                0.331   olfactory receptor, family 51, subfamily G, member 1...
OR51L1                0.319   olfactory receptor, family 51, subfamily L, member 1...
OR52K2                0.318   olfactory receptor, family 52, subfamily K, member 2...
OR51G2                0.318   olfactory receptor, family 51, subfamily G, member 2...
OR51E1                0.316   olfactory receptor, family 51, subfamily E, member ...
OR52N2                0.313   olfactory receptor, family 52, subfamily N, member 2...
OR52B2                0.313   olfactory receptor, family 52, subfamily B, member 2...
OR52K1                0.309   olfactory receptor, family 52, subfamily K, member 1...
OR52L1                0.308   olfactory receptor, family 52, subfamily L, member ...
OR52D1                0.308   olfactory receptor, family 52, subfamily D, member 1...
OR52E4                0.301   olfactory receptor, family 52, subfamily E, member 4...
OR52E8                0.300   olfactory receptor, family 52, subfamily E, member 8...
OR52J3                0.298   olfactory receptor, family 52, subfamily J, member ...
OR52N4                0.296   olfactory receptor, family 52, subfamily N, member ...
OR52B6                0.296   olfactory receptor, family 52, subfamily B, member ...
OR51B6                0.296   olfactory receptor, family 51, subfamily B, member 6...
OR52M1                0.295   olfactory receptor, family 52, subfamily M, member 1...
OR51M1                0.295   olfactory receptor, family 51, subfamily M, member 1...
OR51A7                0.295   olfactory receptor, family 51, subfamily A, member 7...
OR51F2                0.295   olfactory receptor, family 51, subfamily F, member 2...
OR51B5                0.293   olfactory receptor, family 51, subfamily B, member 5...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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