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Search of human proteins with 118722347
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118722347 over-expressed breast tumor protein [Homo sapiens]
(384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118722347 over-expressed breast tumor protein [Homo sapiens] 824 0.0
gi|222136684 prickle homolog 1 [Homo sapiens] 222 4e-58
gi|222136682 prickle homolog 1 [Homo sapiens] 222 4e-58
gi|222136680 prickle homolog 1 [Homo sapiens] 222 4e-58
gi|222136678 prickle homolog 1 [Homo sapiens] 222 4e-58
gi|38524620 prickle-like 2 [Homo sapiens] 219 2e-57
gi|7710129 LIM domain only 6 [Homo sapiens] 216 4e-56
gi|7661666 testin isoform 1 [Homo sapiens] 142 7e-34
gi|23238188 testin isoform 2 [Homo sapiens] 142 7e-34
gi|7657309 LIM and cysteine-rich domains 1 [Homo sapiens] 133 2e-31
gi|54112385 four and a half LIM domains 3 [Homo sapiens] 74 2e-13
gi|170932518 paxillin isoform 3 [Homo sapiens] 74 3e-13
gi|170932516 paxillin isoform 2 [Homo sapiens] 74 3e-13
gi|170932514 paxillin isoform 1 [Homo sapiens] 74 3e-13
gi|109638745 transforming growth factor beta 1 induced transcrip... 68 2e-11
gi|21361591 transforming growth factor beta 1 induced transcript... 68 2e-11
gi|228480221 four and a half LIM domains 1 isoform 4 [Homo sapiens] 63 5e-10
gi|228480213 four and a half LIM domains 1 isoform 2 [Homo sapiens] 63 5e-10
gi|228480211 four and a half LIM domains 1 isoform 1 [Homo sapiens] 63 5e-10
gi|228480207 four and a half LIM domains 1 isoform 2 [Homo sapiens] 63 5e-10
gi|228480209 four and a half LIM domains 1 isoform 3 [Homo sapiens] 63 5e-10
gi|228480205 four and a half LIM domains 1 isoform 5 [Homo sapiens] 63 5e-10
gi|21361122 four and a half LIM domains 1 isoform 2 [Homo sapiens] 63 5e-10
gi|30410801 activator of cAMP-responsive element modulator (CREM... 62 7e-10
gi|87159836 four and a half LIM domains 2 [Homo sapiens] 62 9e-10
gi|87159834 four and a half LIM domains 2 [Homo sapiens] 62 9e-10
gi|42403575 four and a half LIM domains 2 [Homo sapiens] 62 9e-10
gi|87159832 four and a half LIM domains 2 [Homo sapiens] 62 9e-10
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 61 1e-09
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 61 1e-09
>gi|118722347 over-expressed breast tumor protein [Homo sapiens]
Length = 384
Score = 824 bits (2128), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MSVQNSGWPHQEDSPKPQDPGPPANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQ 60
MSVQNSGWPHQEDSPKPQDPGPPANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQ
Sbjct: 1 MSVQNSGWPHQEDSPKPQDPGPPANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQ 60
Query: 61 APNWTGLQTLLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLE 120
APNWTGLQTLLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLE
Sbjct: 61 APNWTGLQTLLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLE 120
Query: 121 GHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRH 180
GHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRH
Sbjct: 121 GHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRH 180
Query: 181 HAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSC 240
HAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSC
Sbjct: 181 HAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSC 240
Query: 241 FENRYSDAGSSWAGALEGQAFLGETGLDRTEGRDQTSVNSATLSRTLLAAAGGSSLQTQR 300
FENRYSDAGSSWAGALEGQAFLGETGLDRTEGRDQTSVNSATLSRTLLAAAGGSSLQTQR
Sbjct: 241 FENRYSDAGSSWAGALEGQAFLGETGLDRTEGRDQTSVNSATLSRTLLAAAGGSSLQTQR 300
Query: 301 GLPGSSPQQENRPGDKAEAPKGQEQCRLETIRDPKDTPFSTCSSSSDSEPEGFFLGERLP 360
GLPGSSPQQENRPGDKAEAPKGQEQCRLETIRDPKDTPFSTCSSSSDSEPEGFFLGERLP
Sbjct: 301 GLPGSSPQQENRPGDKAEAPKGQEQCRLETIRDPKDTPFSTCSSSSDSEPEGFFLGERLP 360
Query: 361 QSWKTPGSLQAEDSNASKTHCTMC 384
QSWKTPGSLQAEDSNASKTHCTMC
Sbjct: 361 QSWKTPGSLQAEDSNASKTHCTMC 384
>gi|222136684 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 222 bits (566), Expect = 4e-58
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 6/230 (2%)
Query: 24 ANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQAP--NWTG----LQTLLQQLPPQ 77
+ SD DSG E P + L CL + P N G ++ LL QLPP
Sbjct: 20 STSDDDSGCALEEYAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPH 79
Query: 78 DIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYG 137
D + RYC +L EEE+ ELQ+F A+RK+EALG+G +L+ + CE+C + GE
Sbjct: 80 DNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVA 139
Query: 138 VFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIF 197
VFA+RAG CWH CF C C + L++LIYFY DG+++CGRHHAELL+PRC ACD++IF
Sbjct: 140 VFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACDEIIF 199
Query: 198 SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
+ CTEAEG+ WH HFCC +C LGG RY + G P C CFE+ Y++
Sbjct: 200 ADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGCFESLYAE 249
Score = 43.1 bits (100), Expect = 4e-04
Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 108 GQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLI 167
G+ A L+ P+ C C E++ E E R WH F C C L
Sbjct: 180 GRHHAELLKPR-----CSACDEIIFADE-----CTEAEGRHWHMKHFCCLECETVLGGQR 229
Query: 168 YFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHENHFC--CQDCAGPLG 224
Y DG+ +C L C C + I +GQ WH C C C L
Sbjct: 230 YIMKDGRPFCCGCFESLYAEYCETCGEHIGVDHAQMTYDGQHWHATEACFSCAQCKASLL 289
Query: 225 GGRYALPGGSPCC 237
G + G C
Sbjct: 290 GCPFLPKQGQIYC 302
Score = 35.0 bits (79), Expect = 0.11
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 336 DTPFSTCSSSSDSEPEGFFLGERLPQ 361
D+ S+ SSSSDSE EG+FLG+ +PQ
Sbjct: 760 DSWCSSSSSSSDSEEEGYFLGQPIPQ 785
Score = 32.0 bits (71), Expect = 0.96
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 124 CEKCRELLKPGEYGV-FAARAGEQRCWH--QPCFACQACGQALINLIYFYHDGQLYCGR 179
CE C E + GV A + + WH + CF+C C +L+ + GQ+YC +
Sbjct: 251 CETCGEHI-----GVDHAQMTYDGQHWHATEACFSCAQCKASLLGCPFLPKQGQIYCSK 304
>gi|222136682 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 222 bits (566), Expect = 4e-58
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 6/230 (2%)
Query: 24 ANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQAP--NWTG----LQTLLQQLPPQ 77
+ SD DSG E P + L CL + P N G ++ LL QLPP
Sbjct: 20 STSDDDSGCALEEYAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPH 79
Query: 78 DIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYG 137
D + RYC +L EEE+ ELQ+F A+RK+EALG+G +L+ + CE+C + GE
Sbjct: 80 DNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVA 139
Query: 138 VFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIF 197
VFA+RAG CWH CF C C + L++LIYFY DG+++CGRHHAELL+PRC ACD++IF
Sbjct: 140 VFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACDEIIF 199
Query: 198 SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
+ CTEAEG+ WH HFCC +C LGG RY + G P C CFE+ Y++
Sbjct: 200 ADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGCFESLYAE 249
Score = 43.1 bits (100), Expect = 4e-04
Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 108 GQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLI 167
G+ A L+ P+ C C E++ E E R WH F C C L
Sbjct: 180 GRHHAELLKPR-----CSACDEIIFADE-----CTEAEGRHWHMKHFCCLECETVLGGQR 229
Query: 168 YFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHENHFC--CQDCAGPLG 224
Y DG+ +C L C C + I +GQ WH C C C L
Sbjct: 230 YIMKDGRPFCCGCFESLYAEYCETCGEHIGVDHAQMTYDGQHWHATEACFSCAQCKASLL 289
Query: 225 GGRYALPGGSPCC 237
G + G C
Sbjct: 290 GCPFLPKQGQIYC 302
Score = 35.0 bits (79), Expect = 0.11
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 336 DTPFSTCSSSSDSEPEGFFLGERLPQ 361
D+ S+ SSSSDSE EG+FLG+ +PQ
Sbjct: 760 DSWCSSSSSSSDSEEEGYFLGQPIPQ 785
Score = 32.0 bits (71), Expect = 0.96
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 124 CEKCRELLKPGEYGV-FAARAGEQRCWH--QPCFACQACGQALINLIYFYHDGQLYCGR 179
CE C E + GV A + + WH + CF+C C +L+ + GQ+YC +
Sbjct: 251 CETCGEHI-----GVDHAQMTYDGQHWHATEACFSCAQCKASLLGCPFLPKQGQIYCSK 304
>gi|222136680 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 222 bits (566), Expect = 4e-58
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 6/230 (2%)
Query: 24 ANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQAP--NWTG----LQTLLQQLPPQ 77
+ SD DSG E P + L CL + P N G ++ LL QLPP
Sbjct: 20 STSDDDSGCALEEYAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPH 79
Query: 78 DIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYG 137
D + RYC +L EEE+ ELQ+F A+RK+EALG+G +L+ + CE+C + GE
Sbjct: 80 DNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVA 139
Query: 138 VFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIF 197
VFA+RAG CWH CF C C + L++LIYFY DG+++CGRHHAELL+PRC ACD++IF
Sbjct: 140 VFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACDEIIF 199
Query: 198 SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
+ CTEAEG+ WH HFCC +C LGG RY + G P C CFE+ Y++
Sbjct: 200 ADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGCFESLYAE 249
Score = 43.1 bits (100), Expect = 4e-04
Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 108 GQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLI 167
G+ A L+ P+ C C E++ E E R WH F C C L
Sbjct: 180 GRHHAELLKPR-----CSACDEIIFADE-----CTEAEGRHWHMKHFCCLECETVLGGQR 229
Query: 168 YFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHENHFC--CQDCAGPLG 224
Y DG+ +C L C C + I +GQ WH C C C L
Sbjct: 230 YIMKDGRPFCCGCFESLYAEYCETCGEHIGVDHAQMTYDGQHWHATEACFSCAQCKASLL 289
Query: 225 GGRYALPGGSPCC 237
G + G C
Sbjct: 290 GCPFLPKQGQIYC 302
Score = 35.0 bits (79), Expect = 0.11
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 336 DTPFSTCSSSSDSEPEGFFLGERLPQ 361
D+ S+ SSSSDSE EG+FLG+ +PQ
Sbjct: 760 DSWCSSSSSSSDSEEEGYFLGQPIPQ 785
Score = 32.0 bits (71), Expect = 0.96
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 124 CEKCRELLKPGEYGV-FAARAGEQRCWH--QPCFACQACGQALINLIYFYHDGQLYCGR 179
CE C E + GV A + + WH + CF+C C +L+ + GQ+YC +
Sbjct: 251 CETCGEHI-----GVDHAQMTYDGQHWHATEACFSCAQCKASLLGCPFLPKQGQIYCSK 304
>gi|222136678 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 222 bits (566), Expect = 4e-58
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 6/230 (2%)
Query: 24 ANSDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQAP--NWTG----LQTLLQQLPPQ 77
+ SD DSG E P + L CL + P N G ++ LL QLPP
Sbjct: 20 STSDDDSGCALEEYAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPH 79
Query: 78 DIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYG 137
D + RYC +L EEE+ ELQ+F A+RK+EALG+G +L+ + CE+C + GE
Sbjct: 80 DNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVA 139
Query: 138 VFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIF 197
VFA+RAG CWH CF C C + L++LIYFY DG+++CGRHHAELL+PRC ACD++IF
Sbjct: 140 VFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACDEIIF 199
Query: 198 SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
+ CTEAEG+ WH HFCC +C LGG RY + G P C CFE+ Y++
Sbjct: 200 ADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGCFESLYAE 249
Score = 43.1 bits (100), Expect = 4e-04
Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 108 GQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLI 167
G+ A L+ P+ C C E++ E E R WH F C C L
Sbjct: 180 GRHHAELLKPR-----CSACDEIIFADE-----CTEAEGRHWHMKHFCCLECETVLGGQR 229
Query: 168 YFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHENHFC--CQDCAGPLG 224
Y DG+ +C L C C + I +GQ WH C C C L
Sbjct: 230 YIMKDGRPFCCGCFESLYAEYCETCGEHIGVDHAQMTYDGQHWHATEACFSCAQCKASLL 289
Query: 225 GGRYALPGGSPCC 237
G + G C
Sbjct: 290 GCPFLPKQGQIYC 302
Score = 35.0 bits (79), Expect = 0.11
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 336 DTPFSTCSSSSDSEPEGFFLGERLPQ 361
D+ S+ SSSSDSE EG+FLG+ +PQ
Sbjct: 760 DSWCSSSSSSSDSEEEGYFLGQPIPQ 785
Score = 32.0 bits (71), Expect = 0.96
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 124 CEKCRELLKPGEYGV-FAARAGEQRCWH--QPCFACQACGQALINLIYFYHDGQLYCGR 179
CE C E + GV A + + WH + CF+C C +L+ + GQ+YC +
Sbjct: 251 CETCGEHI-----GVDHAQMTYDGQHWHATEACFSCAQCKASLLGCPFLPKQGQIYCSK 304
>gi|38524620 prickle-like 2 [Homo sapiens]
Length = 844
Score = 219 bits (559), Expect = 2e-57
Identities = 109/238 (45%), Positives = 141/238 (59%), Gaps = 22/238 (9%)
Query: 24 ANSDSDSGHL--------PGEDPEDTHAQGPAVLSLGSLCLDTNQAP--NWTG----LQT 69
+ SD DSG PG PE H CL + P N G ++
Sbjct: 24 STSDDDSGCALEEYAWVPPGLKPEQVHQYYS--------CLPEEKVPYVNSPGEKLRIKQ 75
Query: 70 LLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRE 129
LL QLPP D + RYC +L EEE+ EL+LF ++RK+E LG+G R + G CE+C
Sbjct: 76 LLHQLPPHDNEVRYCNSLDEEEKRELKLFSSQRKRENLGRGNVRPFPVTMTGAICEQCGG 135
Query: 130 LLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRC 189
+ G+ VFA+RAG CWH PCF C C + L++LIYFY DG++YCGRHHAE L+PRC
Sbjct: 136 QINGGDIAVFASRAGHGVCWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRHHAECLKPRC 195
Query: 190 PACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
ACD++IF+ CTEAEG+ WH HFCC +C LGG RY + G P C CFE+ Y++
Sbjct: 196 AACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCHCFESLYAE 253
Score = 38.1 bits (87), Expect = 0.013
Identities = 16/22 (72%), Positives = 20/22 (90%)
Query: 340 STCSSSSDSEPEGFFLGERLPQ 361
STCSSSS+S+ EG+FLGE +PQ
Sbjct: 776 STCSSSSESDNEGYFLGEPIPQ 797
Score = 30.4 bits (67), Expect = 2.8
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 149 WH--QPCFACQACGQALINLIYFYHDGQLYCGR 179
WH + CF C C ++L+ + GQ++C R
Sbjct: 276 WHATETCFCCAHCKKSLLGRPFLPKQGQIFCSR 308
>gi|7710129 LIM domain only 6 [Homo sapiens]
Length = 615
Score = 216 bits (549), Expect = 4e-56
Identities = 109/243 (44%), Positives = 143/243 (58%), Gaps = 9/243 (3%)
Query: 26 SDSDSGHLPGEDPEDTHAQGPAVLSLGSLCLDTNQAP--NWTG----LQTLLQQLPPQDI 79
SD DSG E P + CL ++ P N G ++ LL QLPP D
Sbjct: 82 SDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYVNSPGEKYRIKQLLHQLPPHDS 141
Query: 80 DERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYGVF 139
+ +YC AL EEE+ EL+ F +RK+E LG+G+ R+ + G CE+C + + G+ VF
Sbjct: 142 EAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQIGGGDIAVF 201
Query: 140 AARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSW 199
A+RAG CWH CF C C + L++LIYFYH G++YCGRHHAE LRPRC ACD++IFS
Sbjct: 202 ASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQACDEIIFSP 261
Query: 200 RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENR---YSDAGSSWAGAL 256
CTEAEG+ WH +HFCC +C LGG RY + P C +C+E R Y D G
Sbjct: 262 ECTEAEGRHWHMDHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLD 321
Query: 257 EGQ 259
+GQ
Sbjct: 322 QGQ 324
Score = 35.4 bits (80), Expect = 0.087
Identities = 63/249 (25%), Positives = 90/249 (36%), Gaps = 36/249 (14%)
Query: 143 AGEQRCWHQP--CFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWR 200
A E + WH CF C CG+AL+ + G ++C R + P P + +S
Sbjct: 326 AYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPTAPGPSRRSWSAG 385
Query: 201 CTEAEGQRWHENHFCCQDCAGPL--GGGRYALPGGSPCCPSCF----ENRYSDAGSSWAG 254
A + + + G P P PS F +R+S
Sbjct: 386 PVTAPLAASTASFSAVKGASETTTKGTSTELAPATGPEEPSRFLRGAPHRHSMPELGLRS 445
Query: 255 ALE------GQAFLGETGLDRTEGRDQTSVNSATLSRTLLAAAGG-----SSLQTQRGLP 303
E GQ L D GR T S R L + GG S+ QR P
Sbjct: 446 VPEPPPESPGQPNLRPD--DSAFGRQSTPRVSF---RDPLVSEGGPRRTLSAPPAQRRRP 500
Query: 304 GSSPQQ-----------ENRPGDKAEAPKGQEQCRLETIRDPKDTPFSTCSSSSDS-EPE 351
S P + + ++ + + QC + D + S SSSS+S E +
Sbjct: 501 RSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGSDSESCSSSPSSSSSESSEDD 560
Query: 352 GFFLGERLP 360
GFFLGER+P
Sbjct: 561 GFFLGERIP 569
>gi|7661666 testin isoform 1 [Homo sapiens]
Length = 421
Score = 142 bits (357), Expect = 7e-34
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 32/209 (15%)
Query: 70 LLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALG------------QGVARLVLP 117
L +QLP D D C L E E++ F + K EALG QG ++ +P
Sbjct: 150 LAKQLPAHDQDPSKCHELSPREVKEMEQFVKKYKSEALGVGDVKLPCEMDAQGPKQMNIP 209
Query: 118 --------------------KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQ 157
K ++C C+ +K G+ ++A RAG + WH CF C
Sbjct: 210 GGDRSTPAAVGAMEDKSAEHKRTQYSCYCCKLSMKEGDPAIYAERAGYDKLWHPACFVCS 269
Query: 158 ACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQ 217
C + L+++IYF+ + +LYCGRH+ + +PRC CD+LIFS T+AE Q WH HFCC
Sbjct: 270 TCHELLVDMIYFWKNEKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAENQNWHLKHFCCF 329
Query: 218 DCAGPLGGGRYALPGGSPCCPSCFENRYS 246
DC L G Y + P C C+ ++
Sbjct: 330 DCDSILAGEIYVMVNDKPVCKPCYVKNHA 358
>gi|23238188 testin isoform 2 [Homo sapiens]
Length = 412
Score = 142 bits (357), Expect = 7e-34
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 32/209 (15%)
Query: 70 LLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALG------------QGVARLVLP 117
L +QLP D D C L E E++ F + K EALG QG ++ +P
Sbjct: 141 LAKQLPAHDQDPSKCHELSPREVKEMEQFVKKYKSEALGVGDVKLPCEMDAQGPKQMNIP 200
Query: 118 --------------------KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQ 157
K ++C C+ +K G+ ++A RAG + WH CF C
Sbjct: 201 GGDRSTPAAVGAMEDKSAEHKRTQYSCYCCKLSMKEGDPAIYAERAGYDKLWHPACFVCS 260
Query: 158 ACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQ 217
C + L+++IYF+ + +LYCGRH+ + +PRC CD+LIFS T+AE Q WH HFCC
Sbjct: 261 TCHELLVDMIYFWKNEKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAENQNWHLKHFCCF 320
Query: 218 DCAGPLGGGRYALPGGSPCCPSCFENRYS 246
DC L G Y + P C C+ ++
Sbjct: 321 DCDSILAGEIYVMVNDKPVCKPCYVKNHA 349
>gi|7657309 LIM and cysteine-rich domains 1 [Homo sapiens]
Length = 365
Score = 133 bits (335), Expect = 2e-31
Identities = 73/209 (34%), Positives = 97/209 (46%), Gaps = 32/209 (15%)
Query: 70 LLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVARLV----LPKLEG---- 121
L+ QLP D D C L E E ++ F + K EALG G L LPK EG
Sbjct: 157 LMHQLPIYDQDPSRCRGLLENELKLMEEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQE 216
Query: 122 ------------------------HTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQ 157
+ CE C+ P V++ RAG + WH CF C
Sbjct: 217 KPEGAETTAATTNGSLSDPSKEVEYVCELCKGAAPPDSPVVYSDRAGYNKQWHPTCFVCA 276
Query: 158 ACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQ 217
C + L++LIYF+ DG +CGRH+ E LRPRC CD++IF+ E WH HF C+
Sbjct: 277 KCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFAEDYQRVEDLAWHRKHFVCE 336
Query: 218 DCAGPLGGGRYALPGGSPCCPSCFENRYS 246
C L G Y + G CP+C +++ S
Sbjct: 337 GCEQLLSGRAYIVTKGQLLCPTCSKSKRS 365
>gi|54112385 four and a half LIM domains 3 [Homo sapiens]
Length = 280
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 122 HTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHH 181
+TC +C++L+ +F E R +H+ CF C C ++L + + D +L C +
Sbjct: 38 NTCAECQQLIGHDSRELFY----EDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCY 93
Query: 182 AELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSC 240
+C AC + + R E GQ WHE+ F C C PLG + G+ C C
Sbjct: 94 CSAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPC 153
Query: 241 FENRYS 246
+EN+++
Sbjct: 154 YENKFA 159
Score = 65.5 bits (158), Expect = 8e-11
Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 124 CEKCRELLKPG----EYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGR 179
C C E + PG EYG + WH+ CF C C Q L + + G YC
Sbjct: 101 CSACGETVMPGSRKLEYG--------GQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVP 152
Query: 180 HHAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPS 239
+ PRC C + + T + Q WH C C PL G ++ P C +
Sbjct: 153 CYENKFAPRCARCSKTLTQGGVTYRD-QPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVA 211
Query: 240 CFENRYSDAGSS 251
CF ++ SS
Sbjct: 212 CFGELFAPKCSS 223
Score = 55.8 bits (133), Expect = 6e-08
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 9/120 (7%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C +C + L G GV + WH+ C C C L + D YC E
Sbjct: 162 CARCSKTLTQG--GV----TYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGE 215
Query: 184 LLRPRCPACDQLIF---SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSC 240
L P+C +C + I + E + WH N F C C+ L G + G C C
Sbjct: 216 LFAPKCSSCKRPIVGLGGGKYVSFEDRHWHHNCFSCARCSTSLVGQGFVPDGDQVLCQGC 275
Score = 36.6 bits (83), Expect = 0.039
Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 154 FACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHEN 212
F C C ++L Y D YC + C C QLI R E + +HE
Sbjct: 5 FDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEG 64
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSDAGSS 251
F C C L + C C+ + +S S+
Sbjct: 65 CFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSA 103
>gi|170932518 paxillin isoform 3 [Homo sapiens]
Length = 424
Score = 73.6 bits (179), Expect = 3e-13
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH CF C+ C +N +F HDGQ YC H+ E C C + I + RC A ++
Sbjct: 328 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPI-TGRCITAMAKK 386
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+H HF C C L G + P C +CF
Sbjct: 387 FHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCF 419
Score = 55.5 bits (132), Expect = 8e-08
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
+ WH F C C + + + +F DGQ YC + + L PRC C+ I + A
Sbjct: 208 KTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD-KVVTALD 266
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
+ WH HF C C G + G C
Sbjct: 267 RTWHPEHFFCAQCGAFFGPEGFHEKDGKAYC 297
Score = 54.7 bits (130), Expect = 1e-07
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
R WH F C CG + DG+ YC + + ++ P+C C + I A
Sbjct: 267 RTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILE-NYISALN 325
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENR 244
WH F C++C P G + G P C + R
Sbjct: 326 TLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHER 363
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 189 CPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSDA 248
C AC + I + + A G+ WH HF C C +G + G P C + N +S
Sbjct: 191 CGACKKPI-AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPR 249
Query: 249 GSSWAGALEGQAFLGETGLDRT 270
G + + T LDRT
Sbjct: 250 CYYCNGPILDKVV---TALDRT 268
>gi|170932516 paxillin isoform 2 [Homo sapiens]
Length = 557
Score = 73.6 bits (179), Expect = 3e-13
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH CF C+ C +N +F HDGQ YC H+ E C C + I + RC A ++
Sbjct: 461 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPI-TGRCITAMAKK 519
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+H HF C C L G + P C +CF
Sbjct: 520 FHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCF 552
Score = 55.5 bits (132), Expect = 8e-08
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
+ WH F C C + + + +F DGQ YC + + L PRC C+ I + A
Sbjct: 341 KTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD-KVVTALD 399
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
+ WH HF C C G + G C
Sbjct: 400 RTWHPEHFFCAQCGAFFGPEGFHEKDGKAYC 430
Score = 54.7 bits (130), Expect = 1e-07
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
R WH F C CG + DG+ YC + + ++ P+C C + I A
Sbjct: 400 RTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILE-NYISALN 458
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENR 244
WH F C++C P G + G P C + R
Sbjct: 459 TLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHER 496
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 189 CPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSDA 248
C AC + I + + A G+ WH HF C C +G + G P C + N +S
Sbjct: 324 CGACKKPI-AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPR 382
Query: 249 GSSWAGALEGQAFLGETGLDRT 270
G + + T LDRT
Sbjct: 383 CYYCNGPILDKVV---TALDRT 401
>gi|170932514 paxillin isoform 1 [Homo sapiens]
Length = 591
Score = 73.6 bits (179), Expect = 3e-13
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH CF C+ C +N +F HDGQ YC H+ E C C + I + RC A ++
Sbjct: 495 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPI-TGRCITAMAKK 553
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+H HF C C L G + P C +CF
Sbjct: 554 FHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCF 586
Score = 55.5 bits (132), Expect = 8e-08
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
+ WH F C C + + + +F DGQ YC + + L PRC C+ I + A
Sbjct: 375 KTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD-KVVTALD 433
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
+ WH HF C C G + G C
Sbjct: 434 RTWHPEHFFCAQCGAFFGPEGFHEKDGKAYC 464
Score = 54.7 bits (130), Expect = 1e-07
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
R WH F C CG + DG+ YC + + ++ P+C C + I A
Sbjct: 434 RTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILE-NYISALN 492
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENR 244
WH F C++C P G + G P C + R
Sbjct: 493 TLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHER 530
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 189 CPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSDA 248
C AC + I + + A G+ WH HF C C +G + G P C + N +S
Sbjct: 358 CGACKKPI-AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPR 416
Query: 249 GSSWAGALEGQAFLGETGLDRT 270
G + + T LDRT
Sbjct: 417 CYYCNGPILDKVV---TALDRT 435
>gi|109638745 transforming growth factor beta 1 induced transcript 1
isoform 1 [Homo sapiens]
Length = 461
Score = 67.8 bits (164), Expect = 2e-11
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH CF C+ C +F H+G+ C H C C L + RC A G+R
Sbjct: 365 WHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGSLCATCG-LPVTGRCVSALGRR 423
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+H +HF C C PL G + G P C CF
Sbjct: 424 FHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 456
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/91 (36%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
R WH F C C AL +F DG +C + E PRC C+Q I + A G
Sbjct: 245 RAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPI-RHKMVTALG 303
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
WH HFCC C P G + G P C
Sbjct: 304 THWHPEHFCCVSCGEPFGDEGFHEREGRPYC 334
Score = 62.4 bits (150), Expect = 7e-10
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH F C +CG+ + + +G+ YC R +L PRC C I A
Sbjct: 306 WHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAPRCQGCQGPILD-NYISALSAL 364
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENR 244
WH + F C++C P GG + G P C + F R
Sbjct: 365 WHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHAR 400
Score = 49.7 bits (117), Expect = 4e-06
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 189 CPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
C +C++ I + + A G+ WH HF C C+ LGG + G+P CP C+ R+S
Sbjct: 228 CGSCNKPI-AGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS 284
>gi|21361591 transforming growth factor beta 1 induced transcript 1
isoform 2 [Homo sapiens]
Length = 444
Score = 67.8 bits (164), Expect = 2e-11
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH CF C+ C +F H+G+ C H C C L + RC A G+R
Sbjct: 348 WHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGSLCATCG-LPVTGRCVSALGRR 406
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+H +HF C C PL G + G P C CF
Sbjct: 407 FHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 439
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/91 (36%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 147 RCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEG 206
R WH F C C AL +F DG +C + E PRC C+Q I + A G
Sbjct: 228 RAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPI-RHKMVTALG 286
Query: 207 QRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
WH HFCC C P G + G P C
Sbjct: 287 THWHPEHFCCVSCGEPFGDEGFHEREGRPYC 317
Score = 62.4 bits (150), Expect = 7e-10
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 149 WHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQR 208
WH F C +CG+ + + +G+ YC R +L PRC C I A
Sbjct: 289 WHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAPRCQGCQGPILD-NYISALSAL 347
Query: 209 WHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENR 244
WH + F C++C P GG + G P C + F R
Sbjct: 348 WHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHAR 383
Score = 49.7 bits (117), Expect = 4e-06
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 189 CPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
C +C++ I + + A G+ WH HF C C+ LGG + G+P CP C+ R+S
Sbjct: 211 CGSCNKPI-AGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS 267
>gi|228480221 four and a half LIM domains 1 isoform 4 [Homo sapiens]
Length = 194
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 34 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 89
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 90 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 149
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 150 CVTCHETKFA 159
Score = 34.3 bits (77), Expect = 0.19
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 101 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 156
Query: 184 LLRPRCPACDQ 194
C C++
Sbjct: 157 KFAKHCVKCNK 167
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 5 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 33
>gi|228480213 four and a half LIM domains 1 isoform 2 [Homo sapiens]
Length = 280
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 34 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 89
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 90 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 149
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 150 CVTCHETKFA 159
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 101 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 156
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C++ I S T + Q WH + F C C+ L G R+ C C++N
Sbjct: 157 KFAKHCVKCNKAITSGGIT-YQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C KC + + G G+ + + WH CF C C + L + + Q YC +
Sbjct: 162 CVKCNKAITSG--GI----TYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Query: 184 LLRPRCPACDQLIFSW----RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPS 239
+ +C C I + EGQ WH+ F C+ C+ L R+ CP
Sbjct: 216 FVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPD 275
Query: 240 C 240
C
Sbjct: 276 C 276
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 5 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 33
>gi|228480211 four and a half LIM domains 1 isoform 1 [Homo sapiens]
Length = 323
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 34 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 89
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 90 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 149
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 150 CVTCHETKFA 159
Score = 62.0 bits (149), Expect = 9e-10
Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 8/229 (3%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 101 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 156
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C++ I S T + Q WH + F C C+ L G R+ C C++N
Sbjct: 157 KFAKHCVKCNKAITSGGIT-YQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Query: 244 RYSDAGSSWAGALEGQAFLGETGLDRTEGRDQTSVNSATLSRTLLAAAG--GSSLQTQRG 301
+ + + G+ + ++ R + L TL +A G +R
Sbjct: 216 FVAKKCAGCKNPITGKRTVSRVSHPVSKARKPPVCHGKRLPLTLFPSANLRGRHPGGERT 275
Query: 302 LPGSSPQQENRPGDKAEAPKGQEQCRLETIRDPKDTPFSTCSSSSDSEP 350
P S R AP+G + KD P +T +S++ + P
Sbjct: 276 CP-SWVVVLYRKNRSLAAPRGPGLVKAPVWWPMKDNPGTTTASTAKNAP 323
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 5 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 33
>gi|228480207 four and a half LIM domains 1 isoform 2 [Homo sapiens]
Length = 280
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 34 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 89
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 90 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 149
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 150 CVTCHETKFA 159
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 101 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 156
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C++ I S T + Q WH + F C C+ L G R+ C C++N
Sbjct: 157 KFAKHCVKCNKAITSGGIT-YQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C KC + + G G+ + + WH CF C C + L + + Q YC +
Sbjct: 162 CVKCNKAITSG--GI----TYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Query: 184 LLRPRCPACDQLIFSW----RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPS 239
+ +C C I + EGQ WH+ F C+ C+ L R+ CP
Sbjct: 216 FVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPD 275
Query: 240 C 240
C
Sbjct: 276 C 276
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 5 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 33
>gi|228480209 four and a half LIM domains 1 isoform 3 [Homo sapiens]
Length = 309
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 63 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 118
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 119 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 178
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 179 CVTCHETKFA 188
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 130 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 185
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C++ I S T + Q WH + F C C+ L G R+ C C++N
Sbjct: 186 KFAKHCVKCNKAITSGGIT-YQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 244
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C KC + + G G+ + + WH CF C C + L + + Q YC +
Sbjct: 191 CVKCNKAITSG--GI----TYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 244
Query: 184 LLRPRCPACDQLIFSW----RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPS 239
+ +C C I + EGQ WH+ F C+ C+ L R+ CP
Sbjct: 245 FVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPD 304
Query: 240 C 240
C
Sbjct: 305 C 305
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 34 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 62
>gi|228480205 four and a half LIM domains 1 isoform 5 [Homo sapiens]
Length = 296
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 50 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 105
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 106 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 165
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 166 CVTCHETKFA 175
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 117 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 172
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C++ I S T + Q WH + F C C+ L G R+ C C++N
Sbjct: 173 KFAKHCVKCNKAITSGGIT-YQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 231
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C KC + + G G+ + + WH CF C C + L + + Q YC +
Sbjct: 178 CVKCNKAITSG--GI----TYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 231
Query: 184 LLRPRCPACDQLIFSW----RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPS 239
+ +C C I + EGQ WH+ F C+ C+ L R+ CP
Sbjct: 232 FVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPD 291
Query: 240 C 240
C
Sbjct: 292 C 292
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 21 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 49
>gi|21361122 four and a half LIM domains 1 isoform 2 [Homo sapiens]
Length = 280
Score = 62.8 bits (151), Expect = 5e-10
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 118 KLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYC 177
K +TC +CR+ + V + R WH CF C C L N + D ++ C
Sbjct: 34 KFCANTCVECRKPIGADSKEVHY----KNRFWHDTCFRCAKCLHPLANETFVAKDNKILC 89
Query: 178 GRHHAELLRPRCPACDQLIFSW-RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPC 236
+ P+C C + I + + E +G WH++ F C +C +G G + G
Sbjct: 90 NKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY 149
Query: 237 CPSCFENRYS 246
C +C E +++
Sbjct: 150 CVTCHETKFA 159
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C+ C + + G+ V + WH+ CF C C Q + +F YC H
Sbjct: 101 CKGCFKAIVAGDQNV----EYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHET 156
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C++ I S T + Q WH + F C C+ L G R+ C C++N
Sbjct: 157 KFAKHCVKCNKAITSGGIT-YQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C KC + + G G+ + + WH CF C C + L + + Q YC +
Sbjct: 162 CVKCNKAITSG--GI----TYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 215
Query: 184 LLRPRCPACDQLIFSW----RCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPS 239
+ +C C I + EGQ WH+ F C+ C+ L R+ CP
Sbjct: 216 FVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPD 275
Query: 240 C 240
C
Sbjct: 276 C 276
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
F C C PL G +Y G CC CF+
Sbjct: 5 FDCHYCRDPLQGKKYVQKDGHHCCLKCFD 33
>gi|30410801 activator of cAMP-responsive element modulator (CREM)
in testis [Homo sapiens]
Length = 284
Score = 62.4 bits (150), Expect = 7e-10
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
CE+C++ ++ + + R WH+ CF C C +L+ + D +L C ++
Sbjct: 41 CEECKKPIESDSKDL----CYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSN 96
Query: 184 LLRPRCPACDQLIF-SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFE 242
+C C + I R E +G WHE F C++C P+G C CFE
Sbjct: 97 ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFE 156
Query: 243 NRYS 246
++
Sbjct: 157 KEFA 160
Score = 48.9 bits (115), Expect = 8e-06
Identities = 34/142 (23%), Positives = 54/142 (38%), Gaps = 8/142 (5%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C C+ + PG + + WH+ CF C+ C Q + + YC +
Sbjct: 102 CFHCKRTIMPGSRKM----EFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEK 157
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
C C ++I S T + Q WH+ F C C L ++ P C C+ +
Sbjct: 158 EFAHYCNFCKKVITSGGITFCD-QLWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNH 216
Query: 244 RYSD---AGSSWAGALEGQAFL 262
Y++ A S L G F+
Sbjct: 217 LYANKCVACSKPISGLTGAKFI 238
Score = 45.4 bits (106), Expect = 8e-05
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 122 HTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHH 181
H C C++++ G G+ + WH+ CF C C + L + D +C +
Sbjct: 161 HYCNFCKKVITSG--GITFC----DQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCY 214
Query: 182 AELLRPRCPACDQLIFSWRCTE---AEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCP 238
L +C AC + I + + +WH F C C+ L G + C
Sbjct: 215 NHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQ 274
Query: 239 SC 240
C
Sbjct: 275 KC 276
Score = 37.7 bits (86), Expect = 0.018
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Query: 154 FACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFS-WRCTEAEGQRWHEN 212
F CQ C +L+ Y D YC + + C C + I S + + + WHE
Sbjct: 6 FYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEG 65
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
F C C L +A C C+ N S
Sbjct: 66 CFKCTKCNHSLVEKPFAAKDERLLCTECYSNECS 99
Score = 35.8 bits (81), Expect = 0.067
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
HF CQ C L G +Y L SP C +C++ +S+
Sbjct: 5 HFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSN 39
>gi|87159836 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 62.0 bits (149), Expect = 9e-10
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 119 LEGHTCEKCRELL----KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQ 174
L +TCE+C + + K Y + R WH+ CF C C +L++ + + Q
Sbjct: 35 LFANTCEECGKPIGCDCKDLSY--------KDRHWHEACFHCSQCRNSLVDKPFAAKEDQ 86
Query: 175 LYCGRHHAELLRPRCPACDQLIF-SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGG 233
L C ++ +C C + I R E +G WHE F C C P+G +
Sbjct: 87 LLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDN 146
Query: 234 SPCCPSCFENRYS 246
C C+E +++
Sbjct: 147 QNFCVPCYEKQHA 159
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQR--CWHQPCFACQACGQALINLIYFYHDGQLYCGRHH 181
C++C++ + PG R E + WH+ CF C C Q + + D Q +C +
Sbjct: 101 CQECKKTIMPG------TRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCY 154
Query: 182 AELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+ +C C + I + T E Q WH+ F C C L G R+ C +CF
Sbjct: 155 EKQHAMQCVQCKKPITTGGVTYRE-QPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCF 213
Query: 242 ENRYSDAGSSWAGALEG 258
+ Y+ + + G
Sbjct: 214 CDLYAKKCAGCTNPISG 230
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 116 LPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQL 175
+P E +C + KP G R ++ WH+ CF C AC + L + D
Sbjct: 151 VPCYEKQHAMQCVQCKKPITTGGVTYR---EQPWHKECFVCTACRKQLSGQRFTARDDFA 207
Query: 176 YCGRHHAELLRPRCPACDQLIFSWRCTE---AEGQRWHENHFCCQDCAGPLGGGRYALPG 232
YC +L +C C I T+ E ++WH + F C+ C+ L G +
Sbjct: 208 YCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTER 267
Query: 233 GSPCCPSC 240
CP C
Sbjct: 268 DDILCPDC 275
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 154 FACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHEN 212
F C C ++L Y + YC L C C + I + + + WHE
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRHWHEA 64
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
F C C L +A C C+ N YS
Sbjct: 65 CFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYS 98
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
F C C L G +Y L SP C CFE +++
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFAN 38
>gi|87159834 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 62.0 bits (149), Expect = 9e-10
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 119 LEGHTCEKCRELL----KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQ 174
L +TCE+C + + K Y + R WH+ CF C C +L++ + + Q
Sbjct: 35 LFANTCEECGKPIGCDCKDLSY--------KDRHWHEACFHCSQCRNSLVDKPFAAKEDQ 86
Query: 175 LYCGRHHAELLRPRCPACDQLIF-SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGG 233
L C ++ +C C + I R E +G WHE F C C P+G +
Sbjct: 87 LLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDN 146
Query: 234 SPCCPSCFENRYS 246
C C+E +++
Sbjct: 147 QNFCVPCYEKQHA 159
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQR--CWHQPCFACQACGQALINLIYFYHDGQLYCGRHH 181
C++C++ + PG R E + WH+ CF C C Q + + D Q +C +
Sbjct: 101 CQECKKTIMPG------TRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCY 154
Query: 182 AELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+ +C C + I + T E Q WH+ F C C L G R+ C +CF
Sbjct: 155 EKQHAMQCVQCKKPITTGGVTYRE-QPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCF 213
Query: 242 ENRYSDAGSSWAGALEG 258
+ Y+ + + G
Sbjct: 214 CDLYAKKCAGCTNPISG 230
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 116 LPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQL 175
+P E +C + KP G R ++ WH+ CF C AC + L + D
Sbjct: 151 VPCYEKQHAMQCVQCKKPITTGGVTYR---EQPWHKECFVCTACRKQLSGQRFTARDDFA 207
Query: 176 YCGRHHAELLRPRCPACDQLIFSWRCTE---AEGQRWHENHFCCQDCAGPLGGGRYALPG 232
YC +L +C C I T+ E ++WH + F C+ C+ L G +
Sbjct: 208 YCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTER 267
Query: 233 GSPCCPSC 240
CP C
Sbjct: 268 DDILCPDC 275
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 154 FACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHEN 212
F C C ++L Y + YC L C C + I + + + WHE
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRHWHEA 64
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
F C C L +A C C+ N YS
Sbjct: 65 CFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYS 98
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
F C C L G +Y L SP C CFE +++
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFAN 38
>gi|42403575 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 62.0 bits (149), Expect = 9e-10
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 119 LEGHTCEKCRELL----KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQ 174
L +TCE+C + + K Y + R WH+ CF C C +L++ + + Q
Sbjct: 35 LFANTCEECGKPIGCDCKDLSY--------KDRHWHEACFHCSQCRNSLVDKPFAAKEDQ 86
Query: 175 LYCGRHHAELLRPRCPACDQLIF-SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGG 233
L C ++ +C C + I R E +G WHE F C C P+G +
Sbjct: 87 LLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDN 146
Query: 234 SPCCPSCFENRYS 246
C C+E +++
Sbjct: 147 QNFCVPCYEKQHA 159
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQR--CWHQPCFACQACGQALINLIYFYHDGQLYCGRHH 181
C++C++ + PG R E + WH+ CF C C Q + + D Q +C +
Sbjct: 101 CQECKKTIMPG------TRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCY 154
Query: 182 AELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+ +C C + I + T E Q WH+ F C C L G R+ C +CF
Sbjct: 155 EKQHAMQCVQCKKPITTGGVTYRE-QPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCF 213
Query: 242 ENRYSDAGSSWAGALEG 258
+ Y+ + + G
Sbjct: 214 CDLYAKKCAGCTNPISG 230
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 116 LPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQL 175
+P E +C + KP G R ++ WH+ CF C AC + L + D
Sbjct: 151 VPCYEKQHAMQCVQCKKPITTGGVTYR---EQPWHKECFVCTACRKQLSGQRFTARDDFA 207
Query: 176 YCGRHHAELLRPRCPACDQLIFSWRCTE---AEGQRWHENHFCCQDCAGPLGGGRYALPG 232
YC +L +C C I T+ E ++WH + F C+ C+ L G +
Sbjct: 208 YCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTER 267
Query: 233 GSPCCPSC 240
CP C
Sbjct: 268 DDILCPDC 275
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 154 FACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHEN 212
F C C ++L Y + YC L C C + I + + + WHE
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRHWHEA 64
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
F C C L +A C C+ N YS
Sbjct: 65 CFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYS 98
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
F C C L G +Y L SP C CFE +++
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFAN 38
>gi|87159832 four and a half LIM domains 2 [Homo sapiens]
Length = 279
Score = 62.0 bits (149), Expect = 9e-10
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 119 LEGHTCEKCRELL----KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQ 174
L +TCE+C + + K Y + R WH+ CF C C +L++ + + Q
Sbjct: 35 LFANTCEECGKPIGCDCKDLSY--------KDRHWHEACFHCSQCRNSLVDKPFAAKEDQ 86
Query: 175 LYCGRHHAELLRPRCPACDQLIF-SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGG 233
L C ++ +C C + I R E +G WHE F C C P+G +
Sbjct: 87 LLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDN 146
Query: 234 SPCCPSCFENRYS 246
C C+E +++
Sbjct: 147 QNFCVPCYEKQHA 159
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQR--CWHQPCFACQACGQALINLIYFYHDGQLYCGRHH 181
C++C++ + PG R E + WH+ CF C C Q + + D Q +C +
Sbjct: 101 CQECKKTIMPG------TRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCY 154
Query: 182 AELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCF 241
+ +C C + I + T E Q WH+ F C C L G R+ C +CF
Sbjct: 155 EKQHAMQCVQCKKPITTGGVTYRE-QPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCF 213
Query: 242 ENRYSDAGSSWAGALEG 258
+ Y+ + + G
Sbjct: 214 CDLYAKKCAGCTNPISG 230
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 116 LPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQL 175
+P E +C + KP G R ++ WH+ CF C AC + L + D
Sbjct: 151 VPCYEKQHAMQCVQCKKPITTGGVTYR---EQPWHKECFVCTACRKQLSGQRFTARDDFA 207
Query: 176 YCGRHHAELLRPRCPACDQLIFSWRCTE---AEGQRWHENHFCCQDCAGPLGGGRYALPG 232
YC +L +C C I T+ E ++WH + F C+ C+ L G +
Sbjct: 208 YCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTER 267
Query: 233 GSPCCPSC 240
CP C
Sbjct: 268 DDILCPDC 275
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 154 FACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLI-FSWRCTEAEGQRWHEN 212
F C C ++L Y + YC L C C + I + + + WHE
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRHWHEA 64
Query: 213 HFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYS 246
F C C L +A C C+ N YS
Sbjct: 65 CFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYS 98
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 214 FCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSD 247
F C C L G +Y L SP C CFE +++
Sbjct: 5 FDCHHCNESLFGKKYILREESPYCVVCFETLFAN 38
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 61.2 bits (147), Expect = 1e-09
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C C +++ G F G R WH F C C +L ++ + +YC R + +
Sbjct: 441 CGHCNNVIR----GPFLVAMG--RSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQ 494
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
P C C+ I A Q WH F C C P G + + G P C + N
Sbjct: 495 FFAPLCAKCNTKIMG-EVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYIN 553
Query: 244 RYS 246
+S
Sbjct: 554 LFS 556
Score = 59.3 bits (142), Expect = 6e-09
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 146 QRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSW-RCTEA 204
++ WH CF C AC + N ++ DG+ YC + + L +C CD + + + EA
Sbjct: 516 RQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEA 575
Query: 205 EGQRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
G WH+ F C C L G + P C
Sbjct: 576 LGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLC 608
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 61.2 bits (147), Expect = 1e-09
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 124 CEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAE 183
C C +++ G F G R WH F C C +L ++ + +YC R + +
Sbjct: 551 CGHCNNVIR----GPFLVAMG--RSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQ 604
Query: 184 LLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFEN 243
P C C+ I A Q WH F C C P G + + G P C + N
Sbjct: 605 FFAPLCAKCNTKIMG-EVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYIN 663
Query: 244 RYS 246
+S
Sbjct: 664 LFS 666
Score = 59.3 bits (142), Expect = 6e-09
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 146 QRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSW-RCTEA 204
++ WH CF C AC + N ++ DG+ YC + + L +C CD + + + EA
Sbjct: 626 RQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEA 685
Query: 205 EGQRWHENHFCCQDCAGPLGGGRYALPGGSPCC 237
G WH+ F C C L G + P C
Sbjct: 686 LGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLC 718
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,162,915
Number of Sequences: 37866
Number of extensions: 1056848
Number of successful extensions: 4836
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 4317
Number of HSP's gapped (non-prelim): 432
length of query: 384
length of database: 18,247,518
effective HSP length: 104
effective length of query: 280
effective length of database: 14,309,454
effective search space: 4006647120
effective search space used: 4006647120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.