Guide to the Human Genome
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Search of human proteins with 239754233

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6
[Homo sapiens]
         (391 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...   815   0.0  
gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...   815   0.0  
gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...   815   0.0  
gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching e...   298   4e-81
gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching en...   292   4e-79
gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching e...   291   5e-79
gi|190684701 glucosaminyl (N-acetyl) transferase family member 7...   213   2e-55
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho...   193   3e-49
gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho...   183   2e-46
gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   175   7e-44
gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   175   7e-44
gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   175   7e-44
gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...   175   7e-44
gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6...   175   7e-44
gi|110611246 xylosyltransferase II [Homo sapiens]                      57   4e-08
gi|28269693 xylosyltransferase I [Homo sapiens]                        55   1e-07
gi|31982895 THAP domain containing 4 [Homo sapiens]                    32   0.98 
gi|93204865 hypothetical protein LOC57724 [Homo sapiens]               30   4.9  
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot...    29   8.3  
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot...    29   8.3  
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot...    29   8.3  
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot...    29   8.3  
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot...    29   8.3  
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote...    29   8.3  
gi|13375642 kringle-containing transmembrane protein 2 isoform b...    29   8.3  
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi...    29   8.3  
gi|27437008 kringle-containing transmembrane protein 2 isoform d...    29   8.3  
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap...    29   8.3  

>gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
           sapiens]
          Length = 391

 Score =  815 bits (2104), Expect = 0.0
 Identities = 391/391 (100%), Positives = 391/391 (100%)

Query: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
           MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV
Sbjct: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60

Query: 61  QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
           QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY
Sbjct: 61  QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120

Query: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
           MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI
Sbjct: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180

Query: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
           ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT
Sbjct: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240

Query: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
           RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK
Sbjct: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300

Query: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
           HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA
Sbjct: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360

Query: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
           PREALGPFHLKAACSAHQNKWGFWNCYLHLK
Sbjct: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391


>gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
           sapiens]
          Length = 391

 Score =  815 bits (2104), Expect = 0.0
 Identities = 391/391 (100%), Positives = 391/391 (100%)

Query: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
           MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV
Sbjct: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60

Query: 61  QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
           QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY
Sbjct: 61  QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120

Query: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
           MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI
Sbjct: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180

Query: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
           ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT
Sbjct: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240

Query: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
           RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK
Sbjct: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300

Query: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
           HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA
Sbjct: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360

Query: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
           PREALGPFHLKAACSAHQNKWGFWNCYLHLK
Sbjct: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391


>gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
           sapiens]
          Length = 391

 Score =  815 bits (2104), Expect = 0.0
 Identities = 391/391 (100%), Positives = 391/391 (100%)

Query: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
           MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV
Sbjct: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60

Query: 61  QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
           QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY
Sbjct: 61  QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120

Query: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
           MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI
Sbjct: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180

Query: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
           ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT
Sbjct: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240

Query: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
           RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK
Sbjct: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300

Query: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
           HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA
Sbjct: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360

Query: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
           PREALGPFHLKAACSAHQNKWGFWNCYLHLK
Sbjct: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391


>gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
           enzyme isoform C [Homo sapiens]
          Length = 402

 Score =  298 bits (764), Expect = 4e-81
 Identities = 162/341 (47%), Positives = 218/341 (63%), Gaps = 17/341 (4%)

Query: 1   MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
           M  W       TL  ++I    Y+  +S P S   + +    +   R   C+ AL    V
Sbjct: 1   MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKS--YEKLNSSSERYFRKTACNHALEKMPV 58

Query: 61  ----QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLF 116
                +LPS L ++     C  Y+ +NHYIT+PLS EEAAFPLAYVM I +DFDTFE LF
Sbjct: 59  FLWENILPSPLRSV----PCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLF 114

Query: 117 WAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACM 176
            AIYMPQNVYC+HVD+ A  ++K +V +LL CF NAFI+S++E ++Y G SRLQADL C+
Sbjct: 115 RAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCL 174

Query: 177 RDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHR 236
           +DL+AS V W+YV NT   DFPLKTNREIVQ+LK     NITP ++    + +R KY H+
Sbjct: 175 KDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQ 234

Query: 237 EYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTY 296
           E+  +   FV   +  K+ PP QL I+FG++YVALTR+FV F L ++ AI+LLQ S+DTY
Sbjct: 235 EHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTY 294

Query: 297 SPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330
           SPD+HFW+TLN +  V G+ P   W   + A+     ++RH
Sbjct: 295 SPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRH 335


>gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
           enzyme isoform B [Homo sapiens]
          Length = 400

 Score =  292 bits (747), Expect = 4e-79
 Identities = 157/331 (47%), Positives = 213/331 (64%), Gaps = 11/331 (3%)

Query: 7   YLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTVQVLPSA 66
           YL II++  +II  V    +     S Q  ++      L    +C + +NGKT  +  + 
Sbjct: 7   YLFIISVSSVIIFIVFSVFNFGGDPSFQRLNIS---DPLRLTQVCTSFINGKTRFLWKNK 63

Query: 67  LSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVY 126
           L  +    SC  Y+ ++HYIT PLS EEA FPLAY+M I   FDTF  LF AIYMPQN+Y
Sbjct: 64  LM-IHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIY 122

Query: 127 CIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQW 186
           C+HVD+ AT +FK AV +LL CF NAF++S+ E ++YGG SRLQADL C+RDL A  V W
Sbjct: 123 CVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSW 182

Query: 187 RYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV 246
           +YV NT   DFPLKTN+EIVQYLK     NITP ++    +  R KY H+E+  +  ++V
Sbjct: 183 KYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV 242

Query: 247 LKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
           ++    K PPP  L I+FGS+YVAL+REF +F L++  A++LLQ S+DT+SPD+HFW+TL
Sbjct: 243 IRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTL 302

Query: 307 NNIP-VEGTGP---W---ILAVNSGSCQNRH 330
           N IP V G+ P   W   + A+     ++RH
Sbjct: 303 NRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 333


>gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching
           enzyme isoform A [Homo sapiens]
          Length = 402

 Score =  291 bits (746), Expect = 5e-79
 Identities = 146/287 (50%), Positives = 194/287 (67%), Gaps = 7/287 (2%)

Query: 51  CDAALNGKTVQVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFD 110
           C     GK      +AL T     +C  Y++ +HY+T  LS EEA FPLAY +TI +DF 
Sbjct: 49  CHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFG 108

Query: 111 TFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQ 170
           TFE LF AIYMPQNVYC+H+D+ AT  FK AV +LL CF NAF++S+ E ++YGG SRLQ
Sbjct: 109 TFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQ 168

Query: 171 ADLACMRDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTER 230
           ADL C+ DL+AS V W+YV NT   DFPLKTNREIVQYLK     NITP ++    +  R
Sbjct: 169 ADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGR 228

Query: 231 IKYTHREYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQ 290
            KY H+E     +++V+K  K K+PPP  + I+FG++YVALTR+F +F L +++A++LL 
Sbjct: 229 TKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLS 288

Query: 291 RSQDTYSPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330
            S+DTYSPD+HFW+TLN IP V G+ P   W   + A+     ++RH
Sbjct: 289 WSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 335


>gi|190684701 glucosaminyl (N-acetyl) transferase family member 7
           [Homo sapiens]
          Length = 430

 Score =  213 bits (542), Expect = 2e-55
 Identities = 104/228 (45%), Positives = 148/228 (64%), Gaps = 3/228 (1%)

Query: 84  HYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVS 143
           H+IT PLS EE  F LAY++TI ++   F  L  AIY+PQNVYCIHVD+ A + +K AV 
Sbjct: 96  HFITRPLSAEEGDFSLAYIITIHKELAMFVQLLRAIYVPQNVYCIHVDEKAPMKYKTAVQ 155

Query: 144 ELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDHDFPLKTNR 203
            L+ CF N FISS++E + Y G +RLQAD+ CM+ L+ S  QW YV N    DFP+KTNR
Sbjct: 156 TLVNCFENVFISSKTEKVAYAGFTRLQADINCMKVLVHSKFQWNYVINLCGQDFPIKTNR 215

Query: 204 EIVQYLKTMNWT--NITPNLVSVLKSTERIKYTHREYRTRAHAFVLKKHKKKSPPPRQLK 261
           EI+ Y+++  W+  NITP ++  L    +   +H E+  +   +    ++ K  PP  L 
Sbjct: 216 EIIHYIRS-KWSDKNITPGVIQPLHIKSKTSQSHLEFVPKGSIYAPPNNRFKDKPPHNLT 274

Query: 262 IHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNI 309
           I+FGS+Y  LTR+FV F L +  A ++LQ S+D  SP++H+W+TLN +
Sbjct: 275 IYFGSAYYVLTRKFVEFILTDIHAKDMLQWSKDIRSPEQHYWVTLNRL 322


>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
           sapiens]
          Length = 438

 Score =  193 bits (490), Expect = 3e-49
 Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 4/231 (1%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C ++  E  +I  PLS EE  FP+AY M I +  + FE L  A+Y PQN+YC+HVD+ + 
Sbjct: 110 CEHFKAERKFIQFPLSKEEVEFPIAYSMVIHEKIENFERLLRAVYAPQNIYCVHVDEKSP 169

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             FK AV  ++ CF N FI+S+   ++Y   SR+QADL CM DL+ S+V W+Y  NT   
Sbjct: 170 ETFKEAVKAIISCFPNVFIASKLVRVVYASWSRVQADLNCMEDLLQSSVPWKYFLNTCGT 229

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVLKKHKKKSP 255
           DFP+K+N E+VQ LK +N  N   + V       R KY     R   H      +KKK P
Sbjct: 230 DFPIKSNAEMVQALKMLNGRNSMESEVPPKHKETRWKYHFEVVRDTLHL----TNKKKDP 285

Query: 256 PPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
           PP  L +  G++Y+  +R+FV   L N  + +L++  +DTYSPD+H W TL
Sbjct: 286 PPYNLTMFTGNAYIVASRDFVQHVLKNPKSQQLIEWVKDTYSPDEHLWATL 336


>gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Homo
           sapiens]
          Length = 453

 Score =  183 bits (465), Expect = 2e-46
 Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 4/238 (1%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C  Y     Y    +S EE +FP+AY + + +D    E L  AIY   N+YCIH D+ A 
Sbjct: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             FK+A++ L +CFSN FI+S+ E + Y   SRLQADL C+ DL+ S++QW+YV N    
Sbjct: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV---LKKHKK 252
           DFPLK+N E+V  LK +N  N+   +       ER  Y H E R   + +V   ++ +  
Sbjct: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288

Query: 253 KSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
           K  PP  ++I  GS+Y  L++ FV +   N I  +    S+DTYSPD+HFW TL  +P
Sbjct: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346


>gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  175 bits (443), Expect = 7e-44
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C  ++    YI  PLS EEA FP+AY + +    +  + L  AIYMPQN YCIHVD  + 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             +  AV  +  CFSN F++S+ E ++Y   SR+QADL CM+DL A +  W+Y+ N    
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
           DFP+KTN EIV+ LK +   N   NL      TER+  +H+E R +    V+        
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270

Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
             K  PP +  +  GS+Y  ++RE+V + L N+   +L++ +QDTYSPD++ W T+  IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330

Query: 311 -VEGTGP 316
            V G+ P
Sbjct: 331 EVPGSLP 337


>gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  175 bits (443), Expect = 7e-44
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C  ++    YI  PLS EEA FP+AY + +    +  + L  AIYMPQN YCIHVD  + 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             +  AV  +  CFSN F++S+ E ++Y   SR+QADL CM+DL A +  W+Y+ N    
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
           DFP+KTN EIV+ LK +   N   NL      TER+  +H+E R +    V+        
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270

Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
             K  PP +  +  GS+Y  ++RE+V + L N+   +L++ +QDTYSPD++ W T+  IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330

Query: 311 -VEGTGP 316
            V G+ P
Sbjct: 331 EVPGSLP 337


>gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  175 bits (443), Expect = 7e-44
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C  ++    YI  PLS EEA FP+AY + +    +  + L  AIYMPQN YCIHVD  + 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             +  AV  +  CFSN F++S+ E ++Y   SR+QADL CM+DL A +  W+Y+ N    
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
           DFP+KTN EIV+ LK +   N   NL      TER+  +H+E R +    V+        
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270

Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
             K  PP +  +  GS+Y  ++RE+V + L N+   +L++ +QDTYSPD++ W T+  IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330

Query: 311 -VEGTGP 316
            V G+ P
Sbjct: 331 EVPGSLP 337


>gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  175 bits (443), Expect = 7e-44
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C  ++    YI  PLS EEA FP+AY + +    +  + L  AIYMPQN YCIHVD  + 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             +  AV  +  CFSN F++S+ E ++Y   SR+QADL CM+DL A +  W+Y+ N    
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
           DFP+KTN EIV+ LK +   N   NL      TER+  +H+E R +    V+        
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270

Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
             K  PP +  +  GS+Y  ++RE+V + L N+   +L++ +QDTYSPD++ W T+  IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330

Query: 311 -VEGTGP 316
            V G+ P
Sbjct: 331 EVPGSLP 337


>gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 428

 Score =  175 bits (443), Expect = 7e-44
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)

Query: 76  CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
           C  ++    YI  PLS EEA FP+AY + +    +  + L  AIYMPQN YCIHVD  + 
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159

Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
             +  AV  +  CFSN F++S+ E ++Y   SR+QADL CM+DL A +  W+Y+ N    
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219

Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
           DFP+KTN EIV+ LK +   N   NL      TER+  +H+E R +    V+        
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270

Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
             K  PP +  +  GS+Y  ++RE+V + L N+   +L++ +QDTYSPD++ W T+  IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330

Query: 311 -VEGTGP 316
            V G+ P
Sbjct: 331 EVPGSLP 337


>gi|110611246 xylosyltransferase II [Homo sapiens]
          Length = 865

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 28/251 (11%)

Query: 99  LAYVMTI-SQDFDTFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQ 157
           +AY++ +  +     + L  A+Y  Q+ + IHVDK +    +  V EL + + N  ++  
Sbjct: 234 IAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREVV-ELAQGYDNVRVTPW 292

Query: 158 SEYIIYGGKSRLQADLACMRDLI-ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTN 216
               I+GG S L+  L  MRDL+      W +  N    D+P +TN E+V +L      N
Sbjct: 293 RMVTIWGGASLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRDKN 352

Query: 217 ITPNLVSVLKSTERIKYTHRE------YRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVA 270
              +        +  ++  ++      +   +H + L + +     P  + +  GS +  
Sbjct: 353 FLKS-----HGRDNSRFIKKQGLDRLFHECDSHMWRLGERQ----IPAGIVVDGGSDWFV 403

Query: 271 LTREFVHFALY--NKIAIELLQRSQDTYSPDKHFWITL--NNIPVEGTGPWILAVNSGS- 325
           LTR FV + +Y  + +  +L Q    T  P + F+ T+  N++  E      L V + + 
Sbjct: 404 LTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACETLVDNNLRVTNWNR 463

Query: 326 -----CQNRHI 331
                CQ +HI
Sbjct: 464 KLGCKCQYKHI 474


>gi|28269693 xylosyltransferase I [Homo sapiens]
          Length = 959

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)

Query: 115 LFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLA 174
           +F AIY   + Y IHVDK +    +  V ++   +SN  ++      I+GG S L   L 
Sbjct: 345 MFKAIYHKDHFYYIHVDKRSNYLHR-QVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQ 403

Query: 175 CMRDLIASTV-QWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKY 233
            MRDL+  T   W +  N    D+P++TN ++V +L      N   +        +  ++
Sbjct: 404 SMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKS-----HGRDNARF 458

Query: 234 THREYRTR------AHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALY--NKIA 285
             ++   R      AH + L   +     P  + +  GS +  L R FV +  +  + + 
Sbjct: 459 IRKQGLDRLFLECDAHMWRLGDRR----IPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLV 514

Query: 286 IELLQRSQDTYSPDKHFWIT-LNNIP 310
            ++ Q    T  P + F+ T L N P
Sbjct: 515 TKMKQFYSYTLLPAESFFHTVLENSP 540


>gi|31982895 THAP domain containing 4 [Homo sapiens]
          Length = 577

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 195 HDFPLKTNREIVQYLKTMNWTNITPNLVSVLKS--------TERIKYTHREYRTRAHAFV 246
           H FPLK ++ ++Q+LK +   N TP   S L S        ++R++  HR  +  A   +
Sbjct: 25  HRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSKRLEDQHRLLKPTAVPSI 84

Query: 247 LKKHKKK 253
               +KK
Sbjct: 85  FHLTEKK 91


>gi|93204865 hypothetical protein LOC57724 [Homo sapiens]
          Length = 2579

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 266  SSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIPVEGTGPWILAV-NSG 324
            S Y+A  + F+ + +   I +E+   +QD  +  K    +L+++ ++   PWIL + ++ 
Sbjct: 1921 SPYMADVKTFLGYLVKRLIDLEMTCLAQDPTASRKTVLKSLHSVIIQLFKPWILVLEDNE 1980

Query: 325  SCQNRH 330
            S Q RH
Sbjct: 1981 SSQQRH 1986


>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 6 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 2 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 3 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|13375642 kringle-containing transmembrane protein 2 isoform b
           precursor [Homo sapiens]
          Length = 420

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 318 ILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAG 357
           +  V+ GSCQ     P+G+ +   +P       NCS A G
Sbjct: 211 VYEVSVGSCQGNWTAPQGVIYSPDFPDEYGPDRNCSWALG 250


>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
           sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


>gi|27437008 kringle-containing transmembrane protein 2 isoform d
           precursor [Homo sapiens]
          Length = 462

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 318 ILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAG 357
           +  V+ GSCQ     P+G+ +   +P       NCS A G
Sbjct: 211 VYEVSVGSCQGNWTAPQGVIYSPDFPDEYGPDRNCSWALG 250


>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
           sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
           K+ K++SP P+  K+H G     +T++ +   F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,081,830
Number of Sequences: 37866
Number of extensions: 628378
Number of successful extensions: 1290
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1260
Number of HSP's gapped (non-prelim): 29
length of query: 391
length of database: 18,247,518
effective HSP length: 104
effective length of query: 287
effective length of database: 14,309,454
effective search space: 4106813298
effective search space used: 4106813298
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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