Search of human proteins with 239753025

Search of human proteins with 239753025

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753025 PREDICTED: similar to protein tyrosine phosphatase
4a1 isoform 2 [Homo sapiens]
         (139 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753025 PREDICTED: similar to protein tyrosine phosphatase ...   297   2e-81
gi|169162376 PREDICTED: similar to protein tyrosine phosphatase ...   280   4e-76
gi|4506283 protein tyrosine phosphatase type IVA, member 1 [Homo...   228   1e-60
gi|18104971 protein tyrosine phosphatase type IVA, member 2 isof...   203   4e-53
gi|14589856 protein tyrosine phosphatase type IVA, member 3 isof...   191   1e-49
gi|14589854 protein tyrosine phosphatase type IVA, member 3 isof...   141   2e-34
gi|18104973 protein tyrosine phosphatase type IVA, member 2 isof...    58   3e-09
gi|15451933 CDC14 homolog A isoform 3 [Homo sapiens]                   35   0.015
gi|15451929 CDC14 homolog A isoform 1 [Homo sapiens]                   35   0.015
gi|15451931 CDC14 homolog A isoform 2 [Homo sapiens]                   35   0.015
gi|73765544 phosphatase and tensin homolog [Homo sapiens]              33   0.057
gi|116008458 CDC14 homolog B isoform 3 [Homo sapiens]                  33   0.057
gi|4502699 CDC14 homolog B isoform 1 [Homo sapiens]                    33   0.057
gi|15451936 CDC14 homolog B isoform 2 [Homo sapiens]                   33   0.057
gi|104487611 protein tyrosine phosphatase, receptor type, sigma ...    31   0.28 
gi|104487297 protein tyrosine phosphatase, receptor type, sigma ...    31   0.28 
gi|104487295 protein tyrosine phosphatase, receptor type, sigma ...    31   0.28 
gi|104487006 protein tyrosine phosphatase, receptor type, sigma ...    31   0.28 
gi|104487002 protein tyrosine phosphatase, receptor type, D isof...    31   0.28 
gi|4506309 protein tyrosine phosphatase, receptor type, D isofor...    31   0.28 
gi|18860890 protein tyrosine phosphatase, receptor type, D isofo...    31   0.28 
gi|18860892 protein tyrosine phosphatase, receptor type, D isofo...    31   0.28 
gi|18860894 protein tyrosine phosphatase, receptor type, D isofo...    31   0.28 
gi|4501897 activin A receptor, type IIA precursor [Homo sapiens]       31   0.37 
gi|109633041 protein tyrosine phosphatase, receptor type, F isof...    30   0.63 
gi|109633039 protein tyrosine phosphatase, receptor type, F isof...    30   0.63 
gi|30089952 protein tyrosine phosphatase domain containing 1 pro...    30   0.83 
gi|30089950 protein tyrosine phosphatase domain containing 1 pro...    30   0.83 
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor...    29   1.1  
gi|116734708 activin A receptor, type IIB precursor [Homo sapiens]     29   1.1  

>gi|239753025 PREDICTED: similar to protein tyrosine phosphatase 4a1
           isoform 2 [Homo sapiens]
          Length = 139

 Score =  297 bits (761), Expect = 2e-81
 Identities = 139/139 (100%), Positives = 139/139 (100%)

Query: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEDWPFGDGAPPSNQIVADWLHFVKIKFCE 60
           MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEDWPFGDGAPPSNQIVADWLHFVKIKFCE
Sbjct: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEDWPFGDGAPPSNQIVADWLHFVKIKFCE 60

Query: 61  EPGCYIAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIGQKRSGAFKSKQLLYLEKYHP 120
           EPGCYIAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIGQKRSGAFKSKQLLYLEKYHP
Sbjct: 61  EPGCYIAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIGQKRSGAFKSKQLLYLEKYHP 120

Query: 121 KMRLRFKDSNSHINNCCIQ 139
           KMRLRFKDSNSHINNCCIQ
Sbjct: 121 KMRLRFKDSNSHINNCCIQ 139


>gi|169162376 PREDICTED: similar to protein tyrosine phosphatase 4a1
           isoform 1 [Homo sapiens]
          Length = 170

 Score =  280 bits (715), Expect = 4e-76
 Identities = 138/170 (81%), Positives = 139/170 (81%), Gaps = 31/170 (18%)

Query: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIED--------------------------- 33
           MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIE+                           
Sbjct: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEELKKYGATTIVRVCEATYDTTLVEKEGI 60

Query: 34  ----WPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
               WPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG
Sbjct: 61  HVLNWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 120

Query: 90  MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ 139
           MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ
Sbjct: 121 MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ 170


>gi|4506283 protein tyrosine phosphatase type IVA, member 1 [Homo
           sapiens]
          Length = 173

 Score =  228 bits (581), Expect = 1e-60
 Identities = 116/170 (68%), Positives = 122/170 (71%), Gaps = 31/170 (18%)

Query: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIE---------------------------- 32
           MN PAPV+VTYKNMRF ITHNPTN TLNKFIE                            
Sbjct: 4   MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI 63

Query: 33  ---DWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
              DWPF DGAPPSNQIV DWL  VKIKF EEPGC IAV+C+ GLG+APVLVALA +EGG
Sbjct: 64  HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGG 123

Query: 90  MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ 139
           MK+EDAVQFI QKR GAF SKQLLYLEKY PKMRLRFKDSN H NNCCIQ
Sbjct: 124 MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173


>gi|18104971 protein tyrosine phosphatase type IVA, member 2 isoform
           1 [Homo sapiens]
          Length = 167

 Score =  203 bits (516), Expect = 4e-53
 Identities = 102/170 (60%), Positives = 117/170 (68%), Gaps = 34/170 (20%)

Query: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIE---------------------------- 32
           MN PAPV+++Y+NMRF ITHNPTN TLNKF E                            
Sbjct: 1   MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEKEGI 60

Query: 33  ---DWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
              DWPF DGAPP NQIV DWL+ +K KF EEPGC +AV+C+ GLG+APVLVALA +E G
Sbjct: 61  HVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGRAPVLVALALIECG 120

Query: 90  MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ 139
           MK+EDAVQFI QKR GAF SKQLLYLEKY PKMRLRF+D+N H   CC+Q
Sbjct: 121 MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDTNGH---CCVQ 167


>gi|14589856 protein tyrosine phosphatase type IVA, member 3 isoform
           1 [Homo sapiens]
          Length = 173

 Score =  191 bits (486), Expect = 1e-49
 Identities = 94/169 (55%), Positives = 110/169 (65%), Gaps = 31/169 (18%)

Query: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIED--------------------------- 33
           MN PAPV+V+YK+MRF ITHNPTN TL+ FIED                           
Sbjct: 4   MNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEKDGI 63

Query: 34  ----WPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
               WPF DGAPP  ++V DWL  VK KFCE PG  +AV+C+ GLG+APVLVALA +E G
Sbjct: 64  TVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALIESG 123

Query: 90  MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCI 138
           MK+EDA+QFI QKR GA  SKQL YLEKY PK RLRFKD ++H   CC+
Sbjct: 124 MKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCV 172


>gi|14589854 protein tyrosine phosphatase type IVA, member 3 isoform
           2 [Homo sapiens]
          Length = 148

 Score =  141 bits (355), Expect = 2e-34
 Identities = 75/169 (44%), Positives = 88/169 (52%), Gaps = 56/169 (33%)

Query: 1   MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIED--------------------------- 33
           MN PAPV+V+YK+MRF ITHNPTN TL+ FIED                           
Sbjct: 4   MNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEKDGI 63

Query: 34  ----WPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
               WPF DGAPP  ++V DWL  VK KFCE PG  +AV+C+ GLG+             
Sbjct: 64  TVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGR------------- 110

Query: 90  MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCI 138
                       KR GA  SKQL YLEKY PK RLRFKD ++H   CC+
Sbjct: 111 ------------KRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCV 147


>gi|18104973 protein tyrosine phosphatase type IVA, member 2
          isoform 2 [Homo sapiens]
          Length = 82

 Score = 57.8 bits (138), Expect = 3e-09
 Identities = 24/33 (72%), Positives = 29/33 (87%)

Query: 1  MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIED 33
          MN PAPV+++Y+NMRF ITHNPTN TLNKF E+
Sbjct: 1  MNRPAPVEISYENMRFLITHNPTNATLNKFTEE 33


>gi|15451933 CDC14 homolog A isoform 3 [Homo sapiens]
          Length = 383

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 36  FGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEG-GMKHED 94
           F DG+ PS+ IV  +L+      CE     IAV+C  GLG+   L+A   ++     H +
Sbjct: 249 FIDGSTPSDNIVRRFLNI-----CENTEGAIAVHCKAGLGRTGTLIACYVMKHYRFTHAE 303

Query: 95  AVQFIGQKRSGAFKSKQLLYLEK 117
            + +I   R G+    Q  +LE+
Sbjct: 304 IIAWIRICRPGSIIGPQQHFLEE 326


>gi|15451929 CDC14 homolog A isoform 1 [Homo sapiens]
          Length = 594

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 36  FGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEG-GMKHED 94
           F DG+ PS+ IV  +L+      CE     IAV+C  GLG+   L+A   ++     H +
Sbjct: 249 FIDGSTPSDNIVRRFLNI-----CENTEGAIAVHCKAGLGRTGTLIACYVMKHYRFTHAE 303

Query: 95  AVQFIGQKRSGAFKSKQLLYLEK 117
            + +I   R G+    Q  +LE+
Sbjct: 304 IIAWIRICRPGSIIGPQQHFLEE 326


>gi|15451931 CDC14 homolog A isoform 2 [Homo sapiens]
          Length = 623

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 36  FGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEG-GMKHED 94
           F DG+ PS+ IV  +L+      CE     IAV+C  GLG+   L+A   ++     H +
Sbjct: 249 FIDGSTPSDNIVRRFLNI-----CENTEGAIAVHCKAGLGRTGTLIACYVMKHYRFTHAE 303

Query: 95  AVQFIGQKRSGAFKSKQLLYLEK 117
            + +I   R G+    Q  +LE+
Sbjct: 304 IIAWIRICRPGSIIGPQQHFLEE 326


>gi|73765544 phosphatase and tensin homolog [Homo sapiens]
          Length = 403

 Score = 33.5 bits (75), Expect = 0.057
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 31  IEDWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG- 89
           +  +PF D  PP  +++  +   +     E+     A++C  G G+  V++    +  G 
Sbjct: 85  VAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGK 144

Query: 90  -MKHEDAVQFIGQKRS 104
            +K ++A+ F G+ R+
Sbjct: 145 FLKAQEALDFYGEVRT 160


>gi|116008458 CDC14 homolog B isoform 3 [Homo sapiens]
          Length = 461

 Score = 33.5 bits (75), Expect = 0.057
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 36  FGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVA 82
           F DG+ P++ IV ++L       CE     IAV+C  GLG+   L+A
Sbjct: 248 FADGSTPTDAIVKEFLDI-----CENAEGAIAVHCKAGLGRTGTLIA 289


>gi|4502699 CDC14 homolog B isoform 1 [Homo sapiens]
          Length = 459

 Score = 33.5 bits (75), Expect = 0.057
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 36  FGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVA 82
           F DG+ P++ IV ++L       CE     IAV+C  GLG+   L+A
Sbjct: 285 FADGSTPTDAIVKEFLDI-----CENAEGAIAVHCKAGLGRTGTLIA 326


>gi|15451936 CDC14 homolog B isoform 2 [Homo sapiens]
          Length = 498

 Score = 33.5 bits (75), Expect = 0.057
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 36  FGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVA 82
           F DG+ P++ IV ++L       CE     IAV+C  GLG+   L+A
Sbjct: 285 FADGSTPTDAIVKEFLDI-----CENAEGAIAVHCKAGLGRTGTLIA 326


>gi|104487611 protein tyrosine phosphatase, receptor type, sigma
            isoform 4 precursor [Homo sapiens]
          Length = 1505

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1400 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1456

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1457 MRYEGVV 1463


>gi|104487297 protein tyrosine phosphatase, receptor type, sigma
            isoform 2 precursor [Homo sapiens]
          Length = 1910

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1805 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1861

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1862 MRYEGVV 1868


>gi|104487295 protein tyrosine phosphatase, receptor type, sigma
            isoform 3 precursor [Homo sapiens]
          Length = 1501

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1396 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1452

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1453 MRYEGVV 1459


>gi|104487006 protein tyrosine phosphatase, receptor type, sigma
            isoform 1 precursor [Homo sapiens]
          Length = 1948

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1843 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1899

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1900 MRYEGVV 1906


>gi|104487002 protein tyrosine phosphatase, receptor type, D isoform 5
            precursor [Homo sapiens]
          Length = 1502

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1397 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1453

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1454 MRYEGVV 1460



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 55   KIKFCEEPGCY-IAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIG 100
            ++K C  P    + V+C  G+G+    + + ++   +KHE  V   G
Sbjct: 1127 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYG 1173


>gi|4506309 protein tyrosine phosphatase, receptor type, D isoform 1
            precursor [Homo sapiens]
          Length = 1912

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1807 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1863

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1864 MRYEGVV 1870



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 55   KIKFCEEPGCY-IAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIG 100
            ++K C  P    + V+C  G+G+    + + ++   +KHE  V   G
Sbjct: 1537 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYG 1583


>gi|18860890 protein tyrosine phosphatase, receptor type, D isoform 2
            precursor [Homo sapiens]
          Length = 1899

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1794 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1850

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1851 MRYEGVV 1857



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 55   KIKFCEEPGCY-IAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIG 100
            ++K C  P    + V+C  G+G+    + + ++   +KHE  V   G
Sbjct: 1524 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYG 1570


>gi|18860892 protein tyrosine phosphatase, receptor type, D isoform 3
            precursor [Homo sapiens]
          Length = 1903

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1798 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1854

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1855 MRYEGVV 1861



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 55   KIKFCEEPGCY-IAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIG 100
            ++K C  P    + V+C  G+G+    + + ++   +KHE  V   G
Sbjct: 1528 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYG 1574


>gi|18860894 protein tyrosine phosphatase, receptor type, D isoform 4
            precursor [Homo sapiens]
          Length = 1501

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 33   DWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
            DWP   G P S +   D++   H  K +F ++    I+V+C  G+G+  V + L+ V   
Sbjct: 1396 DWP-EQGVPKSGEGFIDFIGQVHKTKEQFGQDGP--ISVHCSAGVGRTGVFITLSIVLER 1452

Query: 90   MKHEDAV 96
            M++E  V
Sbjct: 1453 MRYEGVV 1459



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 55   KIKFCEEPGCY-IAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIG 100
            ++K C  P    + V+C  G+G+    + + ++   +KHE  V   G
Sbjct: 1126 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYG 1172


>gi|4501897 activin A receptor, type IIA precursor [Homo sapiens]
          Length = 513

 Score = 30.8 bits (68), Expect = 0.37
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 89  GMKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPK 121
           GMKHE+ +QFIG ++ G      L  +  +H K
Sbjct: 240 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 272


>gi|109633041 protein tyrosine phosphatase, receptor type, F isoform 1
            precursor [Homo sapiens]
          Length = 1907

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 26   TLNKF-IEDWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLV 81
            T+ +F   DWP   G P + +   D++   H  K +F ++    I V+C  G+G+  V +
Sbjct: 1794 TIRQFQFTDWP-EQGVPKTGEGFIDFIGQVHKTKEQFGQDGP--ITVHCSAGVGRTGVFI 1850

Query: 82   ALASVEGGMKHEDAV 96
             L+ V   M++E  V
Sbjct: 1851 TLSIVLERMRYEGVV 1865


>gi|109633039 protein tyrosine phosphatase, receptor type, F isoform 2
            precursor [Homo sapiens]
          Length = 1898

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)

Query: 26   TLNKF-IEDWPFGDGAPPSNQIVADWL---HFVKIKFCEEPGCYIAVNCIVGLGKAPVLV 81
            T+ +F   DWP   G P + +   D++   H  K +F ++    I V+C  G+G+  V +
Sbjct: 1785 TIRQFQFTDWP-EQGVPKTGEGFIDFIGQVHKTKEQFGQDGP--ITVHCSAGVGRTGVFI 1841

Query: 82   ALASVEGGMKHEDAV 96
             L+ V   M++E  V
Sbjct: 1842 TLSIVLERMRYEGVV 1856


>gi|30089952 protein tyrosine phosphatase domain containing 1
           protein isoform 1 [Homo sapiens]
          Length = 806

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 66  IAVNCIVGLGKAPVLVALASV-EGGMKHEDAVQFIGQKRSGAFKSK-QLLYLEKYHPKMR 123
           +A++C  GLG+  VL+A   V    M  + A+ F+  KR  + +++ QLL + ++     
Sbjct: 238 VAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREF----- 292

Query: 124 LRFKDSNSHINNCC 137
            +F     +I +CC
Sbjct: 293 TQFLTPLRNIFSCC 306


>gi|30089950 protein tyrosine phosphatase domain containing 1
           protein isoform 2 [Homo sapiens]
          Length = 754

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 66  IAVNCIVGLGKAPVLVALASV-EGGMKHEDAVQFIGQKRSGAFKSK-QLLYLEKYHPKMR 123
           +A++C  GLG+  VL+A   V    M  + A+ F+  KR  + +++ QLL + ++     
Sbjct: 186 VAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREF----- 240

Query: 124 LRFKDSNSHINNCC 137
            +F     +I +CC
Sbjct: 241 TQFLTPLRNIFSCC 254


>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
           [Homo sapiens]
          Length = 1503

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 55  KIKFCEEPGCYIAVNCIVGLGKAPVLVA----LASVEGGMKHEDAVQFIGQK 102
           +I      GC +AV   VG GK+ +L A    L+ VEG +  E AV ++ Q+
Sbjct: 648 RINLTVPQGCLLAVVGPVGAGKSSLLSALLGELSKVEGFVSIEGAVAYVPQE 699


>gi|116734708 activin A receptor, type IIB precursor [Homo sapiens]
          Length = 512

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 89  GMKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPK 121
           GMKHE+ +QFI  ++ G+    +L  +  +H K
Sbjct: 238 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDK 270


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,684,018
Number of Sequences: 37866
Number of extensions: 237386
Number of successful extensions: 458
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 431
Number of HSP's gapped (non-prelim): 54
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.