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Search of human proteins with 239752990
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752990 PREDICTED: hypothetical protein [Homo sapiens]
(360 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752990 PREDICTED: hypothetical protein [Homo sapiens] 682 0.0
gi|239741428 PREDICTED: hypothetical protein [Homo sapiens] 682 0.0
gi|239747554 PREDICTED: hypothetical protein [Homo sapiens] 681 0.0
gi|161016767 mucin 21 [Homo sapiens] 33 0.30
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 33 0.40
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 33 0.40
gi|22748751 solute carrier family 43, member 2 [Homo sapiens] 32 0.88
gi|217330634 serine/threonine kinase 36 [Homo sapiens] 30 2.6
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 30 3.4
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 30 4.4
gi|239757385 PREDICTED: hypothetical protein [Homo sapiens] 30 4.4
gi|239746393 PREDICTED: hypothetical protein [Homo sapiens] 30 4.4
gi|20336214 glutaminase 2 [Homo sapiens] 30 4.4
gi|13124770 vitamin K epoxide reductase complex, subunit 1 isofo... 29 5.7
gi|157694503 solute carrier family 14 (urea transporter), member... 29 5.7
gi|55750053 atrophin-1 [Homo sapiens] 29 5.7
gi|55750041 atrophin-1 [Homo sapiens] 29 5.7
gi|65288071 tensin 3 [Homo sapiens] 29 7.5
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 29 7.5
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom... 29 7.5
gi|16418357 ankyrin repeat domain 40 [Homo sapiens] 29 7.5
gi|216548223 synaptic vesicle glycoprotein 2 [Homo sapiens] 28 9.8
gi|24308527 stereocilin [Homo sapiens] 28 9.8
>gi|239752990 PREDICTED: hypothetical protein [Homo sapiens]
Length = 360
Score = 682 bits (1759), Expect = 0.0
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV 60
MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV
Sbjct: 1 MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV 60
Query: 61 LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL 120
LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL
Sbjct: 61 LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL 120
Query: 121 FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS 180
FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS
Sbjct: 121 FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS 180
Query: 181 SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL 240
SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL
Sbjct: 181 SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL 240
Query: 241 FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF 300
FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF
Sbjct: 241 FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF 300
Query: 301 SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS 360
SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS
Sbjct: 301 SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS 360
>gi|239741428 PREDICTED: hypothetical protein [Homo sapiens]
Length = 360
Score = 682 bits (1759), Expect = 0.0
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV 60
MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV
Sbjct: 1 MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV 60
Query: 61 LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL 120
LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL
Sbjct: 61 LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL 120
Query: 121 FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS 180
FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS
Sbjct: 121 FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS 180
Query: 181 SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL 240
SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL
Sbjct: 181 SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL 240
Query: 241 FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF 300
FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF
Sbjct: 241 FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF 300
Query: 301 SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS 360
SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS
Sbjct: 301 SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS 360
>gi|239747554 PREDICTED: hypothetical protein [Homo sapiens]
Length = 360
Score = 681 bits (1758), Expect = 0.0
Identities = 359/360 (99%), Positives = 360/360 (100%)
Query: 1 MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV 60
MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV
Sbjct: 1 MVGMAALSAFLQLGQEVELMCRWLWKRSSVSVLFWRRARKMARMPLPVMWLESRLRLVMV 60
Query: 61 LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL 120
LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL
Sbjct: 61 LLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSL 120
Query: 121 FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSS 180
FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLG+CFSGVLVLLSSLASFSCKGSFFLTFSS
Sbjct: 121 FFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGICFSGVLVLLSSLASFSCKGSFFLTFSS 180
Query: 181 SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL 240
SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL
Sbjct: 181 SFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSL 240
Query: 241 FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF 300
FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF
Sbjct: 241 FLSLSLLKPVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGF 300
Query: 301 SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS 360
SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS
Sbjct: 301 SPLLPPASSLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPLSSPFLASVLVSTCLLS 360
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 33.5 bits (75), Expect = 0.30
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 60 VLLALSMMAMAKATWSSARVLAKANSLTTVLNSRASVNRTKISFVMQSELLTFTSVISGS 119
VLL ++ +A +S AN+ ++V++S AS S V S + T T ISGS
Sbjct: 8 VLLMFGLLLHLEAATNSNETSTSANTGSSVISSGASTATNSGSSVTSSGVSTAT--ISGS 65
Query: 120 LFFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFS 179
S G S + + +T +G S SG+ + +S +S + G+ T S
Sbjct: 66 --SVTSNGVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNS 123
Query: 180 SS 181
S
Sbjct: 124 ES 125
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.1 bits (74), Expect = 0.40
Identities = 47/146 (32%), Positives = 58/146 (39%), Gaps = 30/146 (20%)
Query: 154 CFSGVLVLLSSLASFSCKGSFFLTFSSSFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPS 213
C SG L+LL L F L L+ + P+ L S F + P LF+ P
Sbjct: 110 CLSGCLLLLLLLTPFLLLHLLLLP-----LLLLLPLFLLALSLPLFFLLLP--LFLLLPL 162
Query: 214 FL---VSVFLRSPFTFSSSSFLATSFISSLFLSLSLLKP----------------VFLSL 254
FL + +FL + SSSS + S SS S S L P L L
Sbjct: 163 FLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSSSSSFPFLLLL 222
Query: 255 PFFS----SSFLVATALSSPLPSFPA 276
P F SSF +T SS SFPA
Sbjct: 223 PLFFLLLLSSFSSSTFSSSSSSSFPA 248
Score = 30.0 bits (66), Expect = 3.4
Identities = 45/146 (30%), Positives = 56/146 (38%), Gaps = 29/146 (19%)
Query: 215 LVSVFLRSPFTFSSSSFLATSFISSLFL-SLSL-----LKPVFLSLPFFSSSFLVATALS 268
L+ + L +PF L + LFL +LSL L P+FL LP F F+ L
Sbjct: 115 LLLLLLLTPFLLLHLLLLPLLLLLPLFLLALSLPLFFLLLPLFLLLPLFLPLFIPLFLLP 174
Query: 269 SPLPSFPASFLSTAALTRPLSMPRMIFSSLGFSPLLPPASSLSLEKLFFKPPLFGSFPRS 328
S PS S+ + + P S P SPL PP PP F S S
Sbjct: 175 SSSPSSS----SSPSYSSPSSSPS------SSSPLPPPP----------PPPSFSSSSSS 214
Query: 329 E---SRLGPRAFLLASLPLSSPFLAS 351
L P FLL SS +S
Sbjct: 215 SFPFLLLLPLFFLLLLSSFSSSTFSS 240
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 33.1 bits (74), Expect = 0.40
Identities = 47/146 (32%), Positives = 58/146 (39%), Gaps = 30/146 (20%)
Query: 154 CFSGVLVLLSSLASFSCKGSFFLTFSSSFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPS 213
C SG L+LL L F L L+ + P+ L S F + P LF+ P
Sbjct: 110 CLSGCLLLLLLLTPFLLLHLLLLP-----LLLLLPLFLLALSLPLFFLLLP--LFLLLPL 162
Query: 214 FL---VSVFLRSPFTFSSSSFLATSFISSLFLSLSLLKP----------------VFLSL 254
FL + +FL + SSSS + S SS S S L P L L
Sbjct: 163 FLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSSSSSFPFLLLL 222
Query: 255 PFFS----SSFLVATALSSPLPSFPA 276
P F SSF +T SS SFPA
Sbjct: 223 PLFFLLLLSSFSSSTFSSSSSSSFPA 248
Score = 30.0 bits (66), Expect = 3.4
Identities = 45/146 (30%), Positives = 56/146 (38%), Gaps = 29/146 (19%)
Query: 215 LVSVFLRSPFTFSSSSFLATSFISSLFL-SLSL-----LKPVFLSLPFFSSSFLVATALS 268
L+ + L +PF L + LFL +LSL L P+FL LP F F+ L
Sbjct: 115 LLLLLLLTPFLLLHLLLLPLLLLLPLFLLALSLPLFFLLLPLFLLLPLFLPLFIPLFLLP 174
Query: 269 SPLPSFPASFLSTAALTRPLSMPRMIFSSLGFSPLLPPASSLSLEKLFFKPPLFGSFPRS 328
S PS S+ + + P S P SPL PP PP F S S
Sbjct: 175 SSSPSSS----SSPSYSSPSSSPS------SSSPLPPPP----------PPPSFSSSSSS 214
Query: 329 E---SRLGPRAFLLASLPLSSPFLAS 351
L P FLL SS +S
Sbjct: 215 SFPFLLLLPLFFLLLLSSFSSSTFSS 240
>gi|22748751 solute carrier family 43, member 2 [Homo sapiens]
Length = 569
Score = 32.0 bits (71), Expect = 0.88
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 110 LTFTSVISGSLFFTL-SRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASF 168
+TFTS+ ++F L S + M+G+ +SS + P L+ GV F VLV+ +
Sbjct: 161 MTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWA----- 215
Query: 169 SCKGSFFLTFSSSFLVSVFPVP 190
C G FL ++ + FP P
Sbjct: 216 GCSGLVFLNCFFNWPLEPFPGP 237
>gi|217330634 serine/threonine kinase 36 [Homo sapiens]
Length = 1315
Score = 30.4 bits (67), Expect = 2.6
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 134 AASSSTLAGPSEGLVGPLGVC--FSGVLVLLSSLASFSCKGSFFLTFSSSFLVSV----- 186
AA++ L+ P+E + P G C + G+L+LL L + K S SSS + +V
Sbjct: 826 AAATHALSAPAEVRLTPPGSCGFYDGLLILLLQLLTEQGKASLIRDMSSSEMWTVLWHRF 885
Query: 187 -----FPVPLFTFSSSFFMSVFP---PALFIFSPSFLVSVFLRSPFTFSSSSFLATSFIS 238
P +S P P + SP + ++ + TF+ L S +S
Sbjct: 886 SMVLRLPEEASAQEGELSLSSPPSPEPDWTLISPQGMAALLSLAMATFTQEPQLCLSCLS 945
Query: 239 ---SLFLSL--SLLKPVFLS 253
S+ +S+ LL P FL+
Sbjct: 946 QHGSILMSILKHLLCPSFLN 965
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 30.0 bits (66), Expect = 3.4
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 25/120 (20%)
Query: 211 SPSFLVSVFLRSPFTFSSSSFLATSFISSLFLSLSLLKPVFLS-----------LPFFSS 259
+PSF S+ + S+ SF +++ I+ S S P F S P F S
Sbjct: 111 TPSFTTSITKTKTTSHSTPSFTSSNSITD---SRSHSTPPFTSSVTTPEMTSHNTPSFMS 167
Query: 260 SFLVATALSSPLPSFPASFL------STAALTRPLSMPRMIFSSLGFSPLLPPASSLSLE 313
S + S PSF +S + ST A+T P + +S SP SSLS +
Sbjct: 168 SIITTETTSHSTPSFTSSTIHSTVSSSTTAITSPFTTAETGVTSTPSSP-----SSLSTD 222
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 211 SPSFLVSVFLRSPFTFSSSSFLATSFIS--------SLFLSLSLLKPVFLSLPFFSSSFL 262
+PSF S+ ++S+ SF +++ I+ S S++ + S P FSSS
Sbjct: 130 TPSFTSSIRTTETTSYSTPSFTSSNTITETTSHSTPSYITSITTTETPSSSTPSFSSSIT 189
Query: 263 VATALSSPLPSFPASFLST 281
S P F +S +T
Sbjct: 190 TTETTSHSTPGFTSSITTT 208
>gi|239757385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 442
Score = 29.6 bits (65), Expect = 4.4
Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 44/278 (15%)
Query: 72 ATWSSARVLAKA-NSLTTVLNSRASVNR---TKISFVMQSELLTFTSVISGSLFFTLSRG 127
A + AR LAK + T ++ +SVN ++ F + TFT++ S
Sbjct: 90 AVLNEARTLAKGFPTFTALIRPFSSVNSQVFNEVRFTAKG-FATFTAL-------NRSFS 141
Query: 128 SSNMLGAASSSTLAGPSEGLVGPL----GVCFSGVLVLLSSLASFSCKGSFFLTFSSSFL 183
S N L + L G + P+ G G ++ + SFS S + + L
Sbjct: 142 SVNSLVVLKFTALIGSFSSVKSPVVNEAGASAKGFSTFIALMRSFSSVNSLVVD-QAKVL 200
Query: 184 VSVFPV------PLFTFSSSFFMSV---------FPPALFIFS----PSFLVSVFLRSPF 224
FP P + +S+ V FP + FS P + +V+L F
Sbjct: 201 AKRFPTFAAFIRPFSSVNSAMLHEVGPLAKRFPTFPTFIRPFSSVNFPMAIEAVYLTKRF 260
Query: 225 -TFSSSSFLATSFISSLFLSLSLLKPVFLSL-----PFFSSSFLVATALSSPLPSFP--A 276
TF + +S S ++ ++ F + PFF+ FLV ++S FP
Sbjct: 261 PTFRARIRPFSSMNSLMYNETGVVGKEFSTFIAFIRPFFTVDFLVLNEVTSSRTCFPTFT 320
Query: 277 SFLSTAALTRPLSMPRMIFSSLGFSPLLPPASSLSLEK 314
+ + + L + + ++ + GF+ P + S K
Sbjct: 321 ALKKSFSSEDSLVLNKCVYVAKGFTAFSPVVMTFSTVK 358
>gi|239746393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 442
Score = 29.6 bits (65), Expect = 4.4
Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 44/278 (15%)
Query: 72 ATWSSARVLAKA-NSLTTVLNSRASVNR---TKISFVMQSELLTFTSVISGSLFFTLSRG 127
A + AR LAK + T ++ +SVN ++ F + TFT++ S
Sbjct: 90 AVLNEARTLAKGFPTFTALIRPFSSVNSQVFNEVRFTAKG-FATFTAL-------NRSFS 141
Query: 128 SSNMLGAASSSTLAGPSEGLVGPL----GVCFSGVLVLLSSLASFSCKGSFFLTFSSSFL 183
S N L + L G + P+ G G ++ + SFS S + + L
Sbjct: 142 SVNSLVVLKFTALIGSFSSVKSPVVNEAGASAKGFSTFIALMRSFSSVNSLVVD-QAKVL 200
Query: 184 VSVFPV------PLFTFSSSFFMSV---------FPPALFIFS----PSFLVSVFLRSPF 224
FP P + +S+ V FP + FS P + +V+L F
Sbjct: 201 AKRFPTFAAFIRPFSSVNSAMLHEVGPLAKRFPTFPTFIRPFSSVNFPMAIEAVYLTKRF 260
Query: 225 -TFSSSSFLATSFISSLFLSLSLLKPVFLSL-----PFFSSSFLVATALSSPLPSFP--A 276
TF + +S S ++ ++ F + PFF+ FLV ++S FP
Sbjct: 261 PTFRARIRPFSSMNSLMYNETGVVGKEFSTFIAFIRPFFTVDFLVLNEVTSSRTCFPTFT 320
Query: 277 SFLSTAALTRPLSMPRMIFSSLGFSPLLPPASSLSLEK 314
+ + + L + + ++ + GF+ P + S K
Sbjct: 321 ALKKSFSSEDSLVLNKCVYVAKGFTAFSPVVMTFSTVK 358
>gi|20336214 glutaminase 2 [Homo sapiens]
Length = 602
Score = 29.6 bits (65), Expect = 4.4
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 80 LAKAN------SLTTVLNSRASVNRTKISFVMQSELLTFTSVISGSLFFT--LSRGSSNM 131
LAK+N SL TV R SV TKI F +QS + T IS S T + +
Sbjct: 186 LAKSNPDLWGVSLCTVDGQRHSVGHTKIPFCLQSCVKPLTYAISISTLGTDYVHKFVGKE 245
Query: 132 LGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASFSCKGSFFLTFSSSFLVSVFPVPL 191
+ L+ EG+ P + +++SSL C + F +L +
Sbjct: 246 PSGLRYNKLSLNEEGI--PHNPMVNAGAIVVSSLIKMDCNKAEKFDFVLQYLNKMAGNEY 303
Query: 192 FTFSSSFFMS 201
FS++ F S
Sbjct: 304 MGFSNATFQS 313
>gi|13124770 vitamin K epoxide reductase complex, subunit 1 isoform
1 [Homo sapiens]
Length = 163
Score = 29.3 bits (64), Expect = 5.7
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 30/148 (20%)
Query: 54 RLRLVMVLLALSMMAM----AKATWSSARVLAK---ANSLTTVLNSRASVNRTKISFVM- 105
RL L + L LS+ A+ A+A R L A S + V +SR + V+
Sbjct: 12 RLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSRWGRGFGLVEHVLG 71
Query: 106 QSELLTFTSVISGSLFFTLSRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSL 165
Q +L ++ I G +F+TL L+G L ++ VL+LLSSL
Sbjct: 72 QDSILNQSNSIFGCIFYTLQL--------------------LLGCLRTRWASVLMLLSSL 111
Query: 166 ASFSCKGSFFLTFSSSFLVSVFPVPLFT 193
S + GS +L + F++ F + T
Sbjct: 112 VSLA--GSVYLAWILFFVLYDFCIVCIT 137
>gi|157694503 solute carrier family 14 (urea transporter), member 2
[Homo sapiens]
Length = 920
Score = 29.3 bits (64), Expect = 5.7
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 45/182 (24%)
Query: 155 FSGVLVLLSSLASFSCKGSFFLTFSSSFLVSVFPVPLFTFSSSFFMSVFPPALFIFSPSF 214
++GVLV L +A FS KG ++ ++ P+ + + S + +F
Sbjct: 646 YNGVLVGLL-MAVFSDKGDYYWWLLLPVIIMSMSCPILSSALGTIFSKWDLPVFTL---- 700
Query: 215 LVSVFLRSPFTFSSSSFLATSFISSLFLSLSLLKP-------------VFLSL------- 254
PF + + +LA + +LF +LL+P V L L
Sbjct: 701 --------PFNITVTLYLAATGHYNLFFPTTLLQPASAMPNITWSEVQVPLLLRAIPVGI 752
Query: 255 --------PFFSSSFLVATALSSPLPSFPASFLST----AALTRPLSMPRMIFSSLGFSP 302
P+ FL+A +SSPL A+ ST AALT + F GF+
Sbjct: 753 GQVYGCDNPWTGGIFLIALFISSPLICLHAAIGSTMGMLAALTIATPFDSIYFGLCGFNS 812
Query: 303 LL 304
L
Sbjct: 813 TL 814
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 29.3 bits (64), Expect = 5.7
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 220 LRSPFTFSSSSFLATSFISSLFLSLSLLKPVFLSLPFFSSSFLVATALS-------SPLP 272
+R P++ SSSS A S SS S + P +LP + SF T+LS P
Sbjct: 371 MRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQP 430
Query: 273 SFPASFLSTAALTRPLSMPRMIFSSLGFSPLLPPAS 308
S P+ + + P R++ +S PP++
Sbjct: 431 SLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST 466
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 29.3 bits (64), Expect = 5.7
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 220 LRSPFTFSSSSFLATSFISSLFLSLSLLKPVFLSLPFFSSSFLVATALS-------SPLP 272
+R P++ SSSS A S SS S + P +LP + SF T+LS P
Sbjct: 371 MRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQP 430
Query: 273 SFPASFLSTAALTRPLSMPRMIFSSLGFSPLLPPAS 308
S P+ + + P R++ +S PP++
Sbjct: 431 SLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST 466
>gi|65288071 tensin 3 [Homo sapiens]
Length = 1445
Score = 28.9 bits (63), Expect = 7.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 300 FSPLLPPASSLSLEKLFFKPP------LFGSFPRSESRLGPRAFLLASLPLSSPFLASVL 353
FSP PP SS + + + P L + SES +GP++ +L + S+P
Sbjct: 865 FSPPEPPLSSPASQHKGGREPRSCPETLTHAVGMSESPIGPKSTMLRADASSTPSFQQAF 924
Query: 354 VSTCLLS 360
S+C +S
Sbjct: 925 ASSCTIS 931
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 28.9 bits (63), Expect = 7.5
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 190 PLFTFSSSFFMSVFPPALFIFSPSFLVSVFLRSPFTFSSSSFLATSFISSLFLSLS---- 245
P+ SSS +S+ P F SP +SP SSF + + S L S
Sbjct: 743 PVSICSSSTSLSL--PQSFPESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHESPQS 800
Query: 246 -----LLKPVFLSLPFFSSSFLVATALSSPLPSFP---ASFLSTAALTRPLSMPRMIF-S 296
P+ + F SS + + SSP+ SFP +S LS ++ PL P + F S
Sbjct: 801 PPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSKSSPESPLQSPVISFSS 860
Query: 297 SLGFSPLLPPASS 309
S SP +SS
Sbjct: 861 STSLSPFSEESSS 873
>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
sapiens]
Length = 1804
Score = 28.9 bits (63), Expect = 7.5
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 81 AKANSLTTVLNSRASVNRTKISFVMQSELLTF-----TSVISG--SLFFTLSRGSSNMLG 133
+ +N+L++ +S S + +SEL ++ TS SG + + S GS+ LG
Sbjct: 1285 SSSNTLSSNASSAHSDEKWYDGDRTESELNSYNYLQGTSADSGIDTTSYGPSHGSTASLG 1344
Query: 134 AASSSTLAGPSEGLVGPL 151
AA+SS +GP + V PL
Sbjct: 1345 AATSSPRSGPGKEKVAPL 1362
>gi|16418357 ankyrin repeat domain 40 [Homo sapiens]
Length = 368
Score = 28.9 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 15/66 (22%)
Query: 272 PSFPASFLSTAALTRPL-----SMPRMIFSSLGFSPLLPPASSLSLEKLFFKPPLFGSFP 326
P+FP + TA + + S P + G PLLPP +PPL G+FP
Sbjct: 127 PAFPFIYTPTAEDSAQMQNGGPSTPPASPPADGSPPLLPPG----------EPPLLGTFP 176
Query: 327 RSESRL 332
R + L
Sbjct: 177 RDHTSL 182
>gi|216548223 synaptic vesicle glycoprotein 2 [Homo sapiens]
Length = 742
Score = 28.5 bits (62), Expect = 9.8
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 17/148 (11%)
Query: 211 SPSFLVSVFLRSPF---TFSSSSFLATSFISSLFLSLSLLKPVFLSLPFFSSSFL----- 262
S SF S+F F T S++ F +FI+++F + L + F++ +S+FL
Sbjct: 523 SVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHNKEG 582
Query: 263 ----VATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGFSPLLPPASSLSLEKLFFK 318
V + SFL T A+ + ++ +G +L +S +S FF
Sbjct: 583 CPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFL 642
Query: 319 PPLFGSFPRSESRLGPRAFLLASLPLSS 346
SF SES + L + ++S
Sbjct: 643 -----SFGNSESAMIALLCLFGGVSIAS 665
>gi|24308527 stereocilin [Homo sapiens]
Length = 1775
Score = 28.5 bits (62), Expect = 9.8
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 249 PVFLSLPFFSSSFLVATALSSPLPSFPASFLSTAALTRPLSMPRMIFSSLGFSPLLPPAS 308
P S F S L+ S L FP S L+ ++ + +SP + P
Sbjct: 792 PRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVLAAIR---------DYSPGMRPEQ 842
Query: 309 SLSLEKLFFKPPLFGSFPRSESRLGPRAFLLASLPL 344
+L K P LFG P P+ L A LPL
Sbjct: 843 KEALAKRLLAPELFGEVP-----AWPQELLWAVLPL 873
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,811,655
Number of Sequences: 37866
Number of extensions: 498987
Number of successful extensions: 2146
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2053
Number of HSP's gapped (non-prelim): 51
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.