Search of human proteins with 239751833

Search of human proteins with 239751833

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751833 PREDICTED: hypothetical protein [Homo sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757326 PREDICTED: hypothetical protein [Homo sapiens]           495   e-140
gi|239751833 PREDICTED: hypothetical protein [Homo sapiens]           495   e-140
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               39   0.003
gi|239754614 PREDICTED: hypothetical protein [Homo sapiens]            35   0.077
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H...    33   0.22 
gi|47132519 Ras association and pleckstrin homology domains 1 is...    32   0.38 
gi|42518068 trans-golgi network protein 2 [Homo sapiens]               32   0.38 
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]            32   0.38 
gi|163965366 nascent polypeptide-associated complex alpha subuni...    32   0.38 
gi|42519916 forkhead box O3A [Homo sapiens]                            32   0.50 
gi|4503739 forkhead box O3A [Homo sapiens]                             32   0.50 
gi|13375654 PTIP-associated 1 protein [Homo sapiens]                   32   0.50 
gi|28872803 myeloid translocation gene on chromosome 16 isoform ...    32   0.65 
gi|59710093 G-protein coupled receptor 112 [Homo sapiens]              32   0.65 
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]     31   0.85 
gi|167736355 mucin 4 isoform a [Homo sapiens]                          31   0.85 
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                31   0.85 
gi|169217599 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|169216125 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|4507955 YY1 transcription factor [Homo sapiens]                     31   1.1  
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]        31   1.1  
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo...    31   1.1  
gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]              31   1.1  
gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]              31   1.1  
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c...    30   1.4  
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca...    30   1.4  
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa...    30   1.4  
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa...    30   1.4  
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap...    30   1.4  
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap...    30   1.4  

>gi|239757326 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 242

 Score =  495 bits (1275), Expect = e-140
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MWQYASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVT 60
           MWQYASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVT
Sbjct: 1   MWQYASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVT 60

Query: 61  EKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN 120
           EKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN
Sbjct: 61  EKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN 120

Query: 121 GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGH 180
           GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGH
Sbjct: 121 GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGH 180

Query: 181 TGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQLGHTLRLPSLPTEAPFCL 240
           TGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQLGHTLRLPSLPTEAPFCL
Sbjct: 181 TGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQLGHTLRLPSLPTEAPFCL 240

Query: 241 TS 242
           TS
Sbjct: 241 TS 242


>gi|239751833 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 242

 Score =  495 bits (1275), Expect = e-140
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MWQYASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVT 60
           MWQYASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVT
Sbjct: 1   MWQYASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVT 60

Query: 61  EKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN 120
           EKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN
Sbjct: 61  EKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN 120

Query: 121 GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGH 180
           GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGH
Sbjct: 121 GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGH 180

Query: 181 TGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQLGHTLRLPSLPTEAPFCL 240
           TGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQLGHTLRLPSLPTEAPFCL
Sbjct: 181 TGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQLGHTLRLPSLPTEAPFCL 240

Query: 241 TS 242
           TS
Sbjct: 241 TS 242


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 14  RSQRPRKSAVVASLG-PRGPP-SSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVP--VRT 69
           R  RP +  +  + G PR PP S+ P+      S   +PT A+T   +T  AS P   RT
Sbjct: 417 RVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASART 476

Query: 70  SKGRPCTAQYTAATDQATPRPRNTFTALEPVTL 102
           S  +P    +TA +    P P +T +   P T+
Sbjct: 477 STHKP--PPFTALSSSPAPTPGSTRSTRPPATM 507


>gi|239754614 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 490

 Score = 34.7 bits (78), Expect = 0.077
 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 22/124 (17%)

Query: 5   ASRLAKRMYRSQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKAS 64
           A+R A+   +++R R  A+  S G  G PS P  C RRRY +T  P              
Sbjct: 103 ATRHAESPEQARRGR-DALSGSSGKVGAPSPPLACPRRRYWATGCP-------------- 147

Query: 65  VPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHW-SCSAATLLANGVT 123
            P   S    C   +       +P  R+       + L + AS  W  CS     A+  +
Sbjct: 148 APAHWSAAARCLQSH------PSPSGRDAMAHWSTLFLAVSASGFWRCCSVGPKFADPGS 201

Query: 124 RDGG 127
           +D G
Sbjct: 202 QDAG 205


>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
           sapiens]
          Length = 747

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 84  DQATPRPRNTFTALEPVTLPMDASAHWSCS---AATLLANGVTRDGGAQGNEDNSI---- 136
           D+  P  +    A +P   P +A+A  + +   A+   A      GG  G E+  +    
Sbjct: 94  DEEPPPAQALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGKRE 153

Query: 137 -DRVLEANGAAEVGGEVPNE--GGEQADDQDGDTKAGPA 172
            D   E +G    G EVP +    EQ DDQD + K+ PA
Sbjct: 154 EDEPEERSGDETPGSEVPGDKAAEEQGDDQDSE-KSKPA 191


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 32  PPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRPR 91
           PP +PP    +   +   PT  KTV  V  +A+ P  T    P   Q         P P 
Sbjct: 774 PPQAPP----KPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPP 829

Query: 92  NTFTALEPVTLPMDAS 107
                + P TLP   S
Sbjct: 830 TPPVPVPPPTLPKQQS 845



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 32   PPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQA--TPR 89
            PP++PP  G+   S   +P     ++     A  PV + +G+    ++ +    +   P 
Sbjct: 1020 PPAAPPKPGKLNLSGVNLP---GVLQQGCVSAKAPVLSGRGKDSVVEFPSPPSDSDFPPP 1076

Query: 90   PRNTFTALEPVTLPMDASAHWSCSAATL 117
            P  T   L P+ +P   S + S   A +
Sbjct: 1077 PPETELPLPPIEIPAVFSGNTSPKVAVV 1104


>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
          Length = 437

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 16/164 (9%)

Query: 18  PRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTA 77
           P KS+  A      P  S      ++ SS     +AKT K  T K+    +T+K     +
Sbjct: 67  PSKSSAEAQTPEDTPNKSGAEAKTQKDSSNKSGAEAKTQKGSTSKSGSEAQTTKDSTSKS 126

Query: 78  QYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLANGVTRDGGAQGNED---- 133
                 +  TP+     +  E  T P D+       A T   +       AQ  +D    
Sbjct: 127 H----PELQTPKDSTGKSGAEAQT-PEDSPNRSGAEAKTQKDSPSKSGSEAQTTKDVPNK 181

Query: 134 NSIDRVLEANGAAEVGGE------VPNE-GGEQADDQDGDTKAG 170
           +  D     +G+++ G E      VPN+ G E+   +DG  K+G
Sbjct: 182 SGADGQTPKDGSSKSGAEDQTPKDVPNKSGAEKQTPKDGSNKSG 225


>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
          Length = 1444

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 16/151 (10%)

Query: 69  TSKGRPCTAQYTAATDQATPRPRNTFTAL---EP--VTLPMDASAHWSCSAAT------- 116
           TS   P  + +T++  Q  P PRN   AL   EP  V++P+  SA  S ++         
Sbjct: 456 TSNDSPSKSVFTSSLFQMEPSPRNQRKALNISEPFAVSVPLRVSAVISTNSTPCRTPPKE 515

Query: 117 LLANGVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGG----EQADDQDGDTKAGPA 172
           L +     +    G+E        +  GA      VP + G    +   +  G  +    
Sbjct: 516 LQSLSSLEEFSFHGSESGGWPEEEKPLGAETSAASVPKKAGLEDAKAVPEAPGTVECSKG 575

Query: 173 VAVLGGGHTGEEHLPEHRQEVHHVVKARRQP 203
           ++   G H  E+  PE      H+ +  ++P
Sbjct: 576 LSQEPGAHLEEKKTPESSLSSQHLNELEKRP 606


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 46/213 (21%), Positives = 68/213 (31%), Gaps = 41/213 (19%)

Query: 29   PRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATP 88
            P+G P+ P        SS   PT   + +  T  A+ P  + KG P     +     A P
Sbjct: 1343 PKGTPTLPATTP----SSKGGPTTPSSKEGPTPPAATP--SHKGGPAMTPPSPKRGPAIP 1396

Query: 89   RPRNTFTALEPVTLPMDASAHWSCSAATLLANGVTRDGGAQGNEDNSIDRVLEANGAAEV 148
             P+   T+  P  +P+        S     A  VTR+G A  ++ +     +      + 
Sbjct: 1397 SPKGDPTS--PAVIPL--------SPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA 1446

Query: 149  GGEVPNEGGEQADDQDGDT-------------------------KAGPAVAVLGGGHTGE 183
                  +GG       GD                          K  PA     G  T  
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506

Query: 184  EHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVP 216
              +P   +EV     +RR P+ P   LL    P
Sbjct: 1507 AVIPSSPKEVPATPSSRRDPIAPTATLLSKKTP 1539


>gi|42519916 forkhead box O3A [Homo sapiens]
          Length = 673

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 143 NGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGHTG 182
           +G       +P E  ++ DD+DG  +AG A+A+ GGG +G
Sbjct: 48  SGETAADSMIPEEEDDE-DDEDGGGRAGSAMAIGGGGGSG 86


>gi|4503739 forkhead box O3A [Homo sapiens]
          Length = 673

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 143 NGAAEVGGEVPNEGGEQADDQDGDTKAGPAVAVLGGGHTG 182
           +G       +P E  ++ DD+DG  +AG A+A+ GGG +G
Sbjct: 48  SGETAADSMIPEEEDDE-DDEDGGGRAGSAMAIGGGGGSG 86


>gi|13375654 PTIP-associated 1 protein [Homo sapiens]
          Length = 254

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 121 GVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGD 166
           G   D G  G E+       E +G  E  GEVP+ GGE+  ++D +
Sbjct: 44  GKAEDEGEGGREETE----REGSGGEEAQGEVPSAGGEEPAEEDSE 85


>gi|28872803 myeloid translocation gene on chromosome 16 isoform
           MTG16a [Homo sapiens]
          Length = 653

 Score = 31.6 bits (70), Expect = 0.65
 Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 20  KSAVVASLG---PRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCT 76
           +S ++AS G   PRGP    P    R+  ++AMP     VK  T+  S P       P  
Sbjct: 30  ESGLLASAGCSAPRGPRKGGPAPVDRKAKASAMPDSPAEVK--TQPRSTPPSMPPPPPAA 87

Query: 77  AQYTAATDQATPRPRNTFTALEPVTLP---MDASAHWSCSAATLLANG 121
           +Q        TP   +T     P TLP         W  S   LL NG
Sbjct: 88  SQGATRPPSFTP---HTHREDGPATLPHGRFHGCLKW--SMVCLLMNG 130


>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
          Length = 3080

 Score = 31.6 bits (70), Expect = 0.65
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 32   PPSSP----PMCGRRRYSSTAMPTKAKTVKSVTEKAS-VPVRTSKGRPCTAQYTAATDQA 86
            PP+S     P+ G R  SS   P    +    T + S  P+ T+   P + +    T   
Sbjct: 1855 PPTSQMVEFPVLGTRMTSSNTQPLLMTSWNIPTAEGSQFPISTTINVPTSNEMETETLHL 1914

Query: 87   TPRPRNTFTALEPVTLPMDASAHWSCSAATLLAN 120
             P P +TFTA +   +  D  A  S   + +L N
Sbjct: 1915 VPGPLSTFTASQTGLVSKDVMAMSSIPMSGILPN 1948


>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
          Length = 2013

 Score = 31.2 bits (69), Expect = 0.85
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 28   GPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQAT 87
            GP   PS  P       S+ + PT + T    T   S P  ++   P T+  +A T   T
Sbjct: 1930 GPGNTPSPVPTT-----STISAPTTSITSAPTTSTTSAPTSSTTSAPTTSTTSAPTSSTT 1984

Query: 88   PRPRNTFTA 96
              P+ + T+
Sbjct: 1985 SSPQTSTTS 1993



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 45   SSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRPRNT 93
            S+T+ PT + T    T   S P  ++   P T+  +A T   T  P  T
Sbjct: 1958 STTSAPTSSTTSAPTTSTTSAPTSSTTSSPQTSTTSAPTTSTTSGPGTT 2006


>gi|167736355 mucin 4 isoform a [Homo sapiens]
          Length = 5284

 Score = 31.2 bits (69), Expect = 0.85
 Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 46   STAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRP-RNTFTALEPVTLPM 104
            ++++ T   T   VT  +S     +   P T   +A+T QATP P  NT +     T+P+
Sbjct: 3222 TSSVSTGHATPLPVTGLSSASTGDTTRLPVTDISSASTGQATPLPVTNTSSVSTGDTMPL 3281

Query: 105  DASAHWSCSAATLLANGVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQD 164
              ++  S S        VT    A       +   + +  +A  G   P    + +    
Sbjct: 3282 PVTSPSSASTGHATPLPVTSTSSASTGHATPVP--VTSTSSASTGHTTPLPVTDTSSAST 3339

Query: 165  GDTKAGPAVAVLGG--GHTGEEHL 186
            GDT   P  +      GHT   H+
Sbjct: 3340 GDTTPLPVTSPSSASTGHTTPLHV 3363



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 48/202 (23%), Positives = 72/202 (35%), Gaps = 18/202 (8%)

Query: 46   STAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRP-RNTFTALEPVTLPM 104
            ++++ T   T   VT  +SV    +   P T+  +A+T  ATP P  +T +A    T P+
Sbjct: 3862 TSSVSTGHATPLPVTSTSSVSTGHATPLPVTSPSSASTGHATPVPVTSTSSASTGDTTPL 3921

Query: 105  DASAHWSCSAATLLANGVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQD 164
              +   S S        VT    A   + +++  V +A+ +A  G   P      +    
Sbjct: 3922 PVTNASSLSTGHATPLHVTSPSSASRGDTSTLP-VTDAS-SASTGHATPLPLTSLSSVST 3979

Query: 165  GDTKAGPAVAVLGGGHTGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQL- 223
            GDT   P              LP     V  +         P PV +      GHTT L 
Sbjct: 3980 GDTTPLPVTDTSSASTGQATPLP-----VTSLSSVSTGDTTPLPVTIPSSASSGHTTSLP 4034

Query: 224  ---------GHTLRLPSLPTEA 236
                     GH   LP   T +
Sbjct: 4035 VTDASSVSTGHGTPLPVTSTSS 4056



 Score = 28.9 bits (63), Expect = 4.2
 Identities = 44/175 (25%), Positives = 61/175 (34%), Gaps = 10/175 (5%)

Query: 51   TKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRP-RNTFTALEPVTLPMDASAH 109
            T   T   VT  +SV    +   P T+  +A+T  ATP P  +T +A      P+  ++ 
Sbjct: 3259 TGQATPLPVTNTSSVSTGDTMPLPVTSPSSASTGHATPLPVTSTSSASTGHATPVPVTST 3318

Query: 110  WSCSAATLLANGVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQDGDTKA 169
             S S        VT    A   +   +   + +  +A  G   P      +    GDT  
Sbjct: 3319 SSASTGHTTPLPVTDTSSASTGDTTPLP--VTSPSSASTGHTTPLHVTIPSSASTGDTST 3376

Query: 170  GPAVAVLGGGHTGEEH-LPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQL 223
             P   V G       H  P    +   V      PL   PV  L  V  G TT L
Sbjct: 3377 LP---VTGASSASTGHATPLPVTDTSSVSTGHATPL---PVTSLSSVSTGDTTPL 3425



 Score = 28.5 bits (62), Expect = 5.5
 Identities = 42/179 (23%), Positives = 60/179 (33%), Gaps = 8/179 (4%)

Query: 46   STAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRP-RNTFTALEPVTLPM 104
            ++++ T   T   VT+ +SV    +   P T+  +A+T   TP P  +T +A    T P+
Sbjct: 2470 TSSVSTGHTTPLLVTDASSVSTGDTTRLPVTSPSSASTGHTTPLPVTDTPSASTGDTTPL 2529

Query: 105  DASAHWSCSAATLLANGVTRDGGAQGNEDNSIDRVLEANGAAEVGGEVPNEGGEQADDQD 164
              +   S S     +  VT    A      S+   +    AA  G   P      +    
Sbjct: 2530 PVTNASSLSTRHATSLHVTSPSSASTGHATSLP--VTDTSAASTGHATPLPVTSTSSAST 2587

Query: 165  GDTKAGPAVAVLGGGHTGEEHLPEHRQEVHHVVKARRQPLLPGPVLLLLLVPCGHTTQL 223
            GDT   P              LP     V     A      P PV        GH T L
Sbjct: 2588 GDTTPLPVTDTYSASTGQATPLP-----VTDTSSASTGDTTPLPVTDTSSASTGHATPL 2641



 Score = 28.5 bits (62), Expect = 5.5
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 46   STAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALE------- 98
            +++  T   T   VT  +S     +   P T   +A+T QATP P  + +++        
Sbjct: 2998 TSSASTGQATALPVTSTSSASTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPL 3057

Query: 99   PVTLPMDAS 107
            PVT P  AS
Sbjct: 3058 PVTSPSSAS 3066



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 45   SSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATPRP---RNTFTALEPVT 101
            S+++  T   T   VT+ +SV    +   P T++ +A+T  ATP P    ++ +      
Sbjct: 3813 STSSASTGDTTPLPVTDTSSVSTGHATSLPVTSRSSASTGHATPLPVTDTSSVSTGHATP 3872

Query: 102  LPMDASAHWSCSAATLL 118
            LP+ +++  S   AT L
Sbjct: 3873 LPVTSTSSVSTGHATPL 3889


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 31.2 bits (69), Expect = 0.85
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 4/105 (3%)

Query: 18   PRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTE---KASVPVRTSKGRP 74
            PRK A      P  P +  P  G++R  S   P K   + ++++    A+ P R +K   
Sbjct: 1815 PRKVAPPCLAQPAAP-AKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPS 1873

Query: 75   CTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLA 119
             ++  T+   Q  PR R   T          AS      A TLLA
Sbjct: 1874 SSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLA 1918


>gi|169217599 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 322

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 12/121 (9%)

Query: 29  PRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATP 88
           P  PP +P   GR    +   P +   V+          RTSKGRPC   + +       
Sbjct: 195 PPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRR-------RTSKGRPCIPGWRSCASALLV 247

Query: 89  RPRNTFTALEPVTLPMDASAHWSCSAATLLANGVTRDGGAQGNEDNSID-RVLEANGAAE 147
           R  +     EP   P  +   W     +LL   +    G  GN D  +  +VL A   + 
Sbjct: 248 RTLSLCKLSEPPPAPA-SRLSWFLGPRSLLCPDLP---GPDGNPDKLLGAKVLTAGPLSN 303

Query: 148 V 148
           V
Sbjct: 304 V 304


>gi|169216125 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 309

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 12/121 (9%)

Query: 29  PRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRPCTAQYTAATDQATP 88
           P  PP +P   GR    +   P +   V+          RTSKGRPC   + +       
Sbjct: 182 PPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRR-------RTSKGRPCIPGWRSCASALLV 234

Query: 89  RPRNTFTALEPVTLPMDASAHWSCSAATLLANGVTRDGGAQGNEDNSID-RVLEANGAAE 147
           R  +     EP   P  +   W     +LL   +    G  GN D  +  +VL A   + 
Sbjct: 235 RTLSLCKLSEPPPAPA-SRLSWFLGPRSLLCPDLP---GPDGNPDKLLGAKVLTAGPLSN 290

Query: 148 V 148
           V
Sbjct: 291 V 291


>gi|4507955 YY1 transcription factor [Homo sapiens]
          Length = 414

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/49 (32%), Positives = 20/49 (40%)

Query: 157 GEQADDQDGDTKAGPAVAVLGGGHTGEEHLPEHRQEVHHVVKARRQPLL 205
           GE+ ++ D D   G      GGGH    H   H    HH      QPL+
Sbjct: 42  GEEEEEDDDDEDGGGGDHGGGGGHGHAGHHHHHHHHHHHPPMIALQPLV 90


>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
          Length = 558

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 40  GRRRYSSTAMPTKAKTVKSVTEKASVPVRTSK-GRPCTAQYTAATDQATPRPRNTFTALE 98
           G    +S  +PT A     +T  + +  RT +      A  TA + Q T +P +  TAL 
Sbjct: 247 GLELLTSGDLPTLASQSAGITASSVISQRTQQTSSQMPASSTAPSSQETVQPTSPATALR 306

Query: 99  PVTLPMDASAHWSCSAAT 116
             TLP   S+  + ++ T
Sbjct: 307 TPTLPETMSSSPTAASTT 324


>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
           sapiens]
          Length = 1199

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/75 (26%), Positives = 32/75 (42%)

Query: 60  TEKASVPVRTSKGRPCTAQYTAATDQATPRPRNTFTALEPVTLPMDASAHWSCSAATLLA 119
           T +   PV   K +P +  ++  T    P+P +        T+P DASAH + S A+   
Sbjct: 235 TTQGLKPVSPPKIQPVSWHHSGGTGDCAPQPVDHKVPKSIGTVPADASAHIALSTASSHD 294

Query: 120 NGVTRDGGAQGNEDN 134
              T    +  N +N
Sbjct: 295 TSTTSVASSWYNRNN 309


>gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]
          Length = 1523

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 21 SAVVASLGPRGPPSSPPMCGRRRYS-STAMPTKAKTVKSVTEKASVPVRTSKGRPC 75
          + V A  G   PP +PP+C RRR   STA     +   S+ +   +  + S G  C
Sbjct: 23 AGVPARRGQSSPPPAPPICLRRRTRLSTASEETVQNRVSLEKVLGITAQNSSGLTC 78


>gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]
          Length = 1518

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 21 SAVVASLGPRGPPSSPPMCGRRRYS-STAMPTKAKTVKSVTEKASVPVRTSKGRPC 75
          + V A  G   PP +PP+C RRR   STA     +   S+ +   +  + S G  C
Sbjct: 23 AGVPARRGQSSPPPAPPICLRRRTRLSTASEETVQNRVSLEKVLGITAQNSSGLTC 78


>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 1 [Homo sapiens]
          Length = 964

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 29  PRGP-PSSPPMCGRRRYSSTAMPTKAKTV----KSVTEKAS-------VPVRTSKGRPCT 76
           P  P P+SP  CG+RRYSS+  P+ A        S+ E+ S       +P+    G P  
Sbjct: 320 PASPRPASP--CGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGP 377

Query: 77  AQYTAATD-QATPRPRNTFTALEPVTLP 103
             Y  A   ++ P+     ++ + V LP
Sbjct: 378 FDYVGAPPAESIPQKTRRTSSEQAVALP 405


>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 2 [Homo sapiens]
          Length = 902

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 29  PRGP-PSSPPMCGRRRYSSTAMPTKAKTV----KSVTEKAS-------VPVRTSKGRPCT 76
           P  P P+SP  CG+RRYSS+  P+ A        S+ E+ S       +P+    G P  
Sbjct: 257 PASPRPASP--CGKRRYSSSGTPSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGP 314

Query: 77  AQYTAATD-QATPRPRNTFTALEPVTLP 103
             Y  A   ++ P+     ++ + V LP
Sbjct: 315 FDYVGAPPAESIPQKTRRTSSEQAVALP 342


>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
           sapiens]
          Length = 817

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 15  SQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRP 74
           +Q   K+   A++   GP S  P        ST +P K   +K+  + A V   T+K  P
Sbjct: 539 TQTVAKTTTAAAVASTGPSSRSP--------STLLPKKPTAIKTEGKPAEVKKMTAKSVP 590

Query: 75  CTAQYTAATDQATPRPRNTFTALEP 99
                  +T  ++ +   T +   P
Sbjct: 591 ADLSRPKSTSTSSMKKTTTLSGTAP 615


>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
           sapiens]
          Length = 1135

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 15  SQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRP 74
           +Q   K+   A++   GP S  P        ST +P K   +K+  + A V   T+K  P
Sbjct: 804 TQTVAKTTTAAAVASTGPSSRSP--------STLLPKKPTAIKTEGKPAEVKKMTAKSVP 855

Query: 75  CTAQYTAATDQATPRPRNTFTALEP 99
                  +T  ++ +   T +   P
Sbjct: 856 ADLSRPKSTSTSSMKKTTTLSGTAP 880


>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
           sapiens]
          Length = 887

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 15  SQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRP 74
           +Q   K+   A++   GP S  P        ST +P K   +K+  + A V   T+K  P
Sbjct: 539 TQTVAKTTTAAAVASTGPSSRSP--------STLLPKKPTAIKTEGKPAEVKKMTAKSVP 590

Query: 75  CTAQYTAATDQATPRPRNTFTALEP 99
                  +T  ++ +   T +   P
Sbjct: 591 ADLSRPKSTSTSSMKKTTTLSGTAP 615


>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
           sapiens]
          Length = 1152

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 15  SQRPRKSAVVASLGPRGPPSSPPMCGRRRYSSTAMPTKAKTVKSVTEKASVPVRTSKGRP 74
           +Q   K+   A++   GP S  P        ST +P K   +K+  + A V   T+K  P
Sbjct: 804 TQTVAKTTTAAAVASTGPSSRSP--------STLLPKKPTAIKTEGKPAEVKKMTAKSVP 855

Query: 75  CTAQYTAATDQATPRPRNTFTALEP 99
                  +T  ++ +   T +   P
Sbjct: 856 ADLSRPKSTSTSSMKKTTTLSGTAP 880


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,045,050
Number of Sequences: 37866
Number of extensions: 556353
Number of successful extensions: 2438
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 2264
Number of HSP's gapped (non-prelim): 228
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.