Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239751732
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751732 PREDICTED: V-set and transmembrane domain
containing 2B [Homo sapiens]
(285 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226437599 V-set and transmembrane domain containing 2B [Homo ... 563 e-161
gi|239757226 PREDICTED: V-set and transmembrane domain containin... 563 e-161
gi|239751732 PREDICTED: V-set and transmembrane domain containin... 563 e-161
gi|239746233 PREDICTED: V-set and transmembrane domain containin... 563 e-161
gi|148743776 V-set and transmembrane domain containing 2 [Homo s... 134 9e-32
gi|18079321 V-set and transmembrane domain containing 2 like [Ho... 125 4e-29
gi|238624147 neuroplastin isoform c precursor [Homo sapiens] 47 2e-05
gi|6912646 neuroplastin isoform b precursor [Homo sapiens] 47 2e-05
gi|117938759 GNAS complex locus XLas [Homo sapiens] 44 2e-04
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 42 8e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 42 8e-04
gi|28372555 sodium channel, voltage-gated, type IV, beta isoform... 40 0.002
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 40 0.002
gi|91982772 mucin 17 [Homo sapiens] 40 0.002
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 40 0.003
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|169172081 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|169170823 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 39 0.007
gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens] 38 0.009
gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens] 38 0.009
gi|41152506 prostaglandin F2 receptor negative regulator [Homo s... 38 0.012
gi|13994287 BTE-binding protein 4 [Homo sapiens] 37 0.015
gi|18079216 CASK interacting protein 1 [Homo sapiens] 37 0.015
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 37 0.015
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 37 0.015
gi|208431824 forkhead box I3 [Homo sapiens] 37 0.015
gi|151301228 formin binding protein 3 [Homo sapiens] 37 0.015
gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens] 37 0.020
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 37 0.020
>gi|226437599 V-set and transmembrane domain containing 2B [Homo
sapiens]
Length = 285
Score = 563 bits (1452), Expect = e-161
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS
Sbjct: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
Query: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ
Sbjct: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
Query: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA
Sbjct: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
Query: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA
Sbjct: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
Query: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH
Sbjct: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
>gi|239757226 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 563 bits (1452), Expect = e-161
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS
Sbjct: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
Query: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ
Sbjct: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
Query: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA
Sbjct: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
Query: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA
Sbjct: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
Query: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH
Sbjct: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
>gi|239751732 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 563 bits (1452), Expect = e-161
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS
Sbjct: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
Query: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ
Sbjct: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
Query: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA
Sbjct: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
Query: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA
Sbjct: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
Query: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH
Sbjct: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
>gi|239746233 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 563 bits (1452), Expect = e-161
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS
Sbjct: 1 MEQRNRLGALGYLPPLLLHALLLFVADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYS 60
Query: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ
Sbjct: 61 LEIQWWYLKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQ 120
Query: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA
Sbjct: 121 DEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAA 180
Query: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA
Sbjct: 181 NANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
Query: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH
Sbjct: 241 SPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLLLALHKFLRLLLGH 285
>gi|148743776 V-set and transmembrane domain containing 2 [Homo
sapiens]
Length = 236
Score = 134 bits (337), Expect = 9e-32
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 16/180 (8%)
Query: 26 ADAAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALSVPG 85
+ A FTE P++VT EG ++EM CAF+ SG+ S LEIQWW+L+ P +L G
Sbjct: 25 SQAKFTEFPRNVTATEGQNVEMSCAFQ-SGSASVYLEIQWWFLRGP-----EDLDPGAEG 78
Query: 86 ARSKVT-------NKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQ 138
A ++V + D TKISTV+VQGNDISH+L++S VR +DEG+YECRV+D + + Q
Sbjct: 79 AGAQVELLPDRDPDSDGTKISTVKVQGNDISHKLQISKVRKKDEGLYECRVTDANYGELQ 138
Query: 139 EHKAQAMLRVLSRFAPPNMQAAEA-VSHIQSSGPRRHGPASAANANNAGAASRT--TSEP 195
EHKAQA L+V + MQA EA +Q PR++ A+ ++ + A RT TS P
Sbjct: 139 EHKAQAYLKVNANSHARRMQAFEASPMWLQDMKPRKNVSAAIPSSIHGSANQRTHSTSSP 198
>gi|18079321 V-set and transmembrane domain containing 2 like [Homo
sapiens]
Length = 204
Score = 125 bits (314), Expect = 4e-29
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Query: 28 AAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALS---VP 84
A FTE P D+T R G+D+EM C+FR SG+ SYSLEIQWWY++ R+ + A + +
Sbjct: 41 ALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSH-RDWTDKQAWASNQLK 99
Query: 85 GARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQA 144
++ + K+ATKIS V+V G++ISH+LRLS V+ DEG YECRV D+SD + HK +A
Sbjct: 100 ASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKA 159
Query: 145 MLRV 148
LRV
Sbjct: 160 YLRV 163
>gi|238624147 neuroplastin isoform c precursor [Homo sapiens]
Length = 394
Score = 46.6 bits (109), Expect = 2e-05
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 24/144 (16%)
Query: 27 DAAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALSVPGA 86
+A F + P T GD E+ C S EIQWWY + E +L GA
Sbjct: 30 NAGFVKSPMSETKLTGDAFELYCDVVGSPTP----EIQWWYAEVNRAESFRQLW---DGA 82
Query: 87 RSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVS-DYSDDDTQEH----- 140
R + +++ G++ LR++ + L+D G YECR S D +D +++
Sbjct: 83 RKR-------RVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITW 135
Query: 141 -KAQAMLRVLSRFAPPNMQAAEAV 163
+AQA + VL + P + +E V
Sbjct: 136 IRAQATISVLQK---PRIVTSEEV 156
>gi|6912646 neuroplastin isoform b precursor [Homo sapiens]
Length = 398
Score = 46.6 bits (109), Expect = 2e-05
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 24/144 (16%)
Query: 27 DAAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALSVPGA 86
+A F + P T GD E+ C S EIQWWY + E +L GA
Sbjct: 30 NAGFVKSPMSETKLTGDAFELYCDVVGSPTP----EIQWWYAEVNRAESFRQLW---DGA 82
Query: 87 RSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVS-DYSDDDTQEH----- 140
R + +++ G++ LR++ + L+D G YECR S D +D +++
Sbjct: 83 RKR-------RVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITW 135
Query: 141 -KAQAMLRVLSRFAPPNMQAAEAV 163
+AQA + VL + P + +E V
Sbjct: 136 IRAQATISVLQK---PRIVTSEEV 156
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 153 APPNMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAA-- 210
A P+ AA A SG PA ++GAA ++P G P +P AA
Sbjct: 427 ADPDSGAAPAAPADPDSGAAPDAPADP----DSGAAPDAPADPDAGAAPEAPAAPAAAET 482
Query: 211 ----IDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSG 245
+ PA P+A A +A T A A+SA+P SG
Sbjct: 483 RAAHVAPAAPDAGAPTAPAASATRAAQVRRAASAAPASG 521
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 41.6 bits (96), Expect = 8e-04
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 13 LPPLLLHALLLFVA--DAAFTEV---PKDVTVREGDDIEMPCAFRASGATSYSLEIQWWY 67
LP LL +LL + D+A +V P+ + G+D E+PC + A++ LE++W+
Sbjct: 9 LPRCLLTLILLQLPKLDSAPFDVIGPPEPILAVVGEDAELPCRL-SPNASAEHLELRWFR 67
Query: 68 LKEPPRELLHELALSVPGARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYEC 127
K P L+H + AT + +G LR+ VR+ D+G Y C
Sbjct: 68 KKVSPAVLVHRDGREQEAEQMPEYRGRATLVQDGIAKGRVA---LRIRGVRVSDDGEYTC 124
Query: 128 RVSDYSDDDTQEHKAQAMLRVLSRFAPPNM 157
+ +D +A L+V + + P++
Sbjct: 125 ----FFREDGSYEEALVHLKVAALGSDPHI 150
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 41.6 bits (96), Expect = 8e-04
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 150 SRFAPPNMQAAEAVSHIQSSGPRRHGPASAAN----ANNAGAASRTTSEPGRGDKSPPPG 205
SR +P + +SSG R P+ + N G+ R+ + GR + P
Sbjct: 276 SRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPP 335
Query: 206 SPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSGQAVLLRQRHGSGTGR 260
P++ P V + AAA+A PT + S S PS Q R G+G R
Sbjct: 336 DKPSSPSPRVRDKAAAAA---PTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRR 387
Score = 30.0 bits (66), Expect = 2.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 164 SHIQSSGPRRHG-----PASAANANNAGAASRTTSEPGRGDKSPPPGSPPAA 210
S +S PRR G PA ++ + + +R++S+ G G +P PG P +
Sbjct: 396 SRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGS 447
>gi|28372555 sodium channel, voltage-gated, type IV, beta isoform 1
precursor [Homo sapiens]
Length = 228
Score = 40.4 bits (93), Expect = 0.002
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 36 DVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALSVPGARSKVTNKDA 95
D+ G +I +PC F + L +W Y ++L E + + KVT KD
Sbjct: 40 DIYAVNGTEILLPCTFSSCFGFE-DLHFRWTYNSSDAFKILIEGTVKNEKSDPKVTLKDD 98
Query: 96 TKISTV---RVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQAMLRVLSR 151
+I+ V + + N+IS LR + D G Y C V + +++ Q H A L+V+ R
Sbjct: 99 DRITLVGSTKEKMNNISIVLR--DLEFSDTGKYTCHVKNPKENNLQHH-ATIFLQVVDR 154
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 174 HGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAA 233
HG AS A +AGA+ S P G+PP PA A AS A TP +
Sbjct: 6 HGNASPARTPSAGASPAQAS---------PAGTPPGRASPAQASPAQASPAGTPPGRASP 56
Query: 234 AAAASSASPP 243
A A+ + +PP
Sbjct: 57 AQASPAGTPP 66
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 40.0 bits (92), Expect = 0.002
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
Query: 79 LALSVPGARSKVTNKDATKISTVRVQGND-ISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137
L S+P + + VT+ +A+ +ST V N ++ +S+ EG S YS+ T
Sbjct: 807 LLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGT-SMPTSTYSEGRT 865
Query: 138 QEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGR 197
+ V + + + + + + +S P + + ++ + S TS PG
Sbjct: 866 ----PLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPGE 921
Query: 198 GDKSPPPGSPPAAIDPAV-PEAAAASAAHTPTTTVAAAAAASSASPPSGQAVLLRQRHGS 256
G S P S P + P V EA SA T+T + +++SP + + + S
Sbjct: 922 G--STPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPS 979
Query: 257 GTGRSYTTDPLLSLLL 272
T+ P+ L+
Sbjct: 980 EGTTPLTSTPVSHTLV 995
Score = 40.0 bits (92), Expect = 0.002
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 79 LALSVPGARSKVTNKDATKISTVRVQGND-ISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137
L S+P + + V + +A+ +ST V N + +S+ + EG + S YSD T
Sbjct: 2103 LLTSIPLSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTEGT-SMQTSTYSDRRT 2161
Query: 138 QEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGR 197
V++ A + + + + +S P + + ++ + S TS P
Sbjct: 2162 PLTSMPVSTTVVASSAISTL----STTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSE 2217
Query: 198 GDKSPPPGSPPAAIDPAVP-EAAAASAAHTPTTTVAAAAAASSASPPSGQ 246
G S P S P + P V EA+ SA T+T + +++SP + +
Sbjct: 2218 G--STPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEATSSPTTAE 2265
Score = 32.0 bits (71), Expect = 0.64
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 24/184 (13%)
Query: 82 SVPGARSK-----------VTNKDATKISTVRVQ-GNDISHRLRLSAVRLQDEGVYECRV 129
S PG RS + N +A+ +ST V ++ S+ EG R+
Sbjct: 2685 STPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPTTAEGT-SMRI 2743
Query: 130 SDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSH--IQSSGPRRHGPASAANANNAGA 187
S SD T + +L P A VS + +S P ++++ A
Sbjct: 2744 STPSDGSTP------LTSILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEV 2797
Query: 188 ASRTTSEPGRGDKSPPPGSPPAAIDP-AVPEAAAASAAHTPTTTVAAAAAASSASPPSGQ 246
S TS P + S P S P P A EA S T+T + +S+SP + +
Sbjct: 2798 TSMPTSTPS--ETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAE 2855
Query: 247 AVLL 250
+++
Sbjct: 2856 GIVV 2859
Score = 31.6 bits (70), Expect = 0.83
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 159 AAEAVSH----IQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPA 214
++EA +H + +S P ++++ A S TS P G + P S P + P
Sbjct: 2411 SSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEG--TTPLASMPVSTTPV 2468
Query: 215 VP-EAAAASAAHTPTTTVAAAAAASSASPPSGQAVLL 250
V EA S T+T + +S+SP + + +++
Sbjct: 2469 VSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVV 2505
Score = 31.2 bits (69), Expect = 1.1
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 177 ASAANANNAGAASRTTSEPGR--GDKSPPPGSPPAAIDP-AVPEAAAASAAHTPTTTVAA 233
A++ A++ + TS P G++S P S P P A EA+ S + T+T
Sbjct: 1192 ATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPVT 1251
Query: 234 AAAASSASPPSGQAVLLRQRHGSGTGRSYTTDPLLSLLL 272
+A +S+SP + + L S T+ P+ + L+
Sbjct: 1252 TSAETSSSPTTAEGTSLPTSTTSEGSTLLTSIPVSTTLV 1290
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 166 IQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAH 225
+ S+ P ++++ A S TS P G +P P + A E + S
Sbjct: 3247 VDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGS-TPLTSMPVSTTTVASSETSTLSTTP 3305
Query: 226 TPTTTVAAAAAASSASPPSGQAVLL-RQRHGSG----TGRSYTTDPLLS 269
T+T + +S+SPP + + G T S++T P++S
Sbjct: 3306 ADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVS 3354
Score = 30.8 bits (68), Expect = 1.4
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 13/172 (7%)
Query: 79 LALSVPGARSKVTNKDATKISTVRVQGND-ISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137
L S+P + + V + +A+ +ST V N + +S+ EG S Y++ T
Sbjct: 1632 LLTSIPVSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPTPAEGT-SMPTSTYTEGRT 1690
Query: 138 QEHKAQAMLRVLSRFAPPNMQAAEAVS--HIQSSGPRRHGPASAANANNAGAASRTTSEP 195
+ + R P A +S + +S P + ++ + S S P
Sbjct: 1691 ------PLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTP 1744
Query: 196 GRGDKSPPPGSPPAAIDPAV-PEAAAASAAHTPTTTVAAAAAASSASPPSGQ 246
G + P S P + P + EA+ SA T+T + +++SP + +
Sbjct: 1745 SEG--TTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEATSSPTTAE 1794
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 166 IQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVP-EAAAASAA 224
+ +S P + ++ + S S P G + P S P + P V EA+ SA
Sbjct: 1362 VDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEG--TTPLTSIPVSTTPVVSSEASTLSAT 1419
Query: 225 HTPTTTVAAAAAASSASPPSGQAV 248
T+T +A +++SP + + +
Sbjct: 1420 PVDTSTPGTTSAEATSSPTTAEGI 1443
Score = 28.5 bits (62), Expect = 7.0
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 9/167 (5%)
Query: 82 SVPGARSKVTNKDATKISTVRVQGN-DISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEH 140
S+P + + V N + + +ST V N + S+ EG S S+ +T
Sbjct: 2283 SIPVSHTLVANSEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGT-SMPTSTSSEGNTPLT 2341
Query: 141 KAQAMLRVLSRFAPPNMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDK 200
+ +++ F + A +S P + ++ A S TS G
Sbjct: 2342 RMPVSTTMVASFETSTLSTTPA----DTSTPVTTYSQAGSSPTTADDTSMPTSTYSEG-- 2395
Query: 201 SPPPGSPPAAIDPAV-PEAAAASAAHTPTTTVAAAAAASSASPPSGQ 246
S P S P + P V EA+ S T+T + +S+SP + +
Sbjct: 2396 STPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAE 2442
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 39.7 bits (91), Expect = 0.003
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 151 RFAPPNMQAAEAVSHIQSSGPRRHGPASAAN-ANNAGAASRTTSEPGRGDKSPP----PG 205
+F PP + ++ + S SS A+AA N AA+ + S P P PG
Sbjct: 126 QFTPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPG 185
Query: 206 SPPAAIDPAVPE-AAAASAAHTPTTTVAAAAAASSASPPSGQAVLLRQRHGSGTGRSYTT 264
S PA++ +VPE AA S +VAA AA ++AS P + G G+ Y T
Sbjct: 186 SAPASV--SVPEPLAAPSNTSCMQRSVAAGAATAAASYP------MSYGQGGSYGQGYPT 237
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 39.3 bits (90), Expect = 0.004
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 176 PASAANANNAGAASRTTSEPGRGDKSP-PPGSPPAAIDPAVPEAAAASAAHTPTTTVAAA 234
P SAA + ++ R + PG G P PG+ P A P AAAAS A P A
Sbjct: 173 PGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGAP 232
Query: 235 AAA 237
AAA
Sbjct: 233 AAA 235
>gi|169172081 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 38.5 bits (88), Expect = 0.007
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 16/142 (11%)
Query: 155 PNMQAAEAVSHIQSSGPRRHG----PASAANANNAGAASRTTSE--PGRGDKSPPPG-SP 207
P+ A+S P+ H P A + A S TT E + PP G +
Sbjct: 48 PSQSQLSALSPTTEELPQSHSQRCPPDRGATPSQLSALSPTTEELPQSHSQRCPPDGGAT 107
Query: 208 PAAIDPAVPEAAAAS----AAHTPTTTVAAAAAASSASPPSGQAVLLRQRHGSGT----- 258
P + AVP A+ +A +PTT + S+ SP + + QRHG GT
Sbjct: 108 PVSALSAVPHDGGAAPVSLSALSPTTEEPPQSQLSALSPTTEELPQHIQRHGRGTIPGGS 167
Query: 259 GRSYTTDPLLSLLLLALHKFLR 280
G DP LL + LR
Sbjct: 168 GHRSYLDPAGETQLLLREQLLR 189
>gi|169170823 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 38.5 bits (88), Expect = 0.007
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 16/142 (11%)
Query: 155 PNMQAAEAVSHIQSSGPRRHG----PASAANANNAGAASRTTSE--PGRGDKSPPPG-SP 207
P+ A+S P+ H P A + A S TT E + PP G +
Sbjct: 48 PSQSQLSALSPTTEELPQSHSQRCPPDRGATPSQLSALSPTTEELPQSHSQRCPPDGGAT 107
Query: 208 PAAIDPAVPEAAAAS----AAHTPTTTVAAAAAASSASPPSGQAVLLRQRHGSGT----- 258
P + AVP A+ +A +PTT + S+ SP + + QRHG GT
Sbjct: 108 PVSALSAVPHDGGAAPVSLSALSPTTEEPPQSQLSALSPTTEELPQHIQRHGRGTILGGS 167
Query: 259 GRSYTTDPLLSLLLLALHKFLR 280
G DP LL + LR
Sbjct: 168 GHRSYLDPAGETQLLLREQLLR 189
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 38.5 bits (88), Expect = 0.007
Identities = 27/67 (40%), Positives = 28/67 (41%)
Query: 180 ANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASS 239
A + A RT G SPP P PA PEAAAA T AAA A S
Sbjct: 678 AEREPSAAERRTCGGCRDGHCSPPAAGDPGPGAPAGPEAAAACNVIVNGTRGAAAEGAKS 737
Query: 240 ASPPSGQ 246
A PP Q
Sbjct: 738 AEPPPEQ 744
Score = 29.6 bits (65), Expect = 3.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 175 GPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPE 217
GP +AA N +R + G PPP PP PA P+
Sbjct: 713 GPEAAAACNVIVNGTRGAAAEGAKSAEPPPEQPPPPPPPAPPK 755
>gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]
Length = 274
Score = 38.1 bits (87), Expect = 0.009
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 156 NMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTS----EPGRGDKSPPP---GSPP 208
++QAAEA ++ + P G A+ T EPG+ ++P G
Sbjct: 94 DVQAAEAEANKKDEAPVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGD 153
Query: 209 AAIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSGQA 247
AA + A P+A A+S + +A AS+ + PS +A
Sbjct: 154 AATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKA 192
Score = 33.1 bits (74), Expect = 0.29
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 177 ASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAA 236
A +A +A AS S + + +P P A VP A A+AA TP AAA A
Sbjct: 171 AGSAETESATKASTDNSPSSKAEDAPAKEEPKQA---DVPAAVTAAAATTPAAEDAAAKA 227
Query: 237 ASSASPPS 244
+A PP+
Sbjct: 228 --TAQPPT 233
Score = 28.5 bits (62), Expect = 7.0
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 161 EAVSHIQSSGPRRHGPASAANANNAGAASRTTS--EPGRGDKSPPPGSPPAAID------ 212
+A +S + G A +A A + +S E + P PAA+
Sbjct: 158 QAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATT 217
Query: 213 PAVPEAAAASAAHTPTTTVAAAAA 236
PA +AAA + A PT T ++ A
Sbjct: 218 PAAEDAAAKATAQPPTETGESSQA 241
>gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]
Length = 238
Score = 38.1 bits (87), Expect = 0.009
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 156 NMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTS----EPGRGDKSPPP---GSPP 208
++QAAEA ++ + P G A+ T EPG+ ++P G
Sbjct: 58 DVQAAEAEANKKDEAPVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGD 117
Query: 209 AAIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSGQA 247
AA + A P+A A+S + +A AS+ + PS +A
Sbjct: 118 AATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKA 156
Score = 33.1 bits (74), Expect = 0.29
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 177 ASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAA 236
A +A +A AS S + + +P P A VP A A+AA TP AAA A
Sbjct: 135 AGSAETESATKASTDNSPSSKAEDAPAKEEPKQA---DVPAAVTAAAATTPAAEDAAAKA 191
Query: 237 ASSASPPS 244
+A PP+
Sbjct: 192 --TAQPPT 197
Score = 28.5 bits (62), Expect = 7.0
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 161 EAVSHIQSSGPRRHGPASAANANNAGAASRTTS--EPGRGDKSPPPGSPPAAID------ 212
+A +S + G A +A A + +S E + P PAA+
Sbjct: 122 QAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATT 181
Query: 213 PAVPEAAAASAAHTPTTTVAAAAA 236
PA +AAA + A PT T ++ A
Sbjct: 182 PAAEDAAAKATAQPPTETGESSQA 205
>gi|41152506 prostaglandin F2 receptor negative regulator [Homo
sapiens]
Length = 879
Score = 37.7 bits (86), Expect = 0.012
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 33 VPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALSVPGARSKVTN 92
VPK+V+V EG ++++ C A E+ W + + P L L+ S V +
Sbjct: 283 VPKNVSVAEGKELDLTCNITTDRADDVRPEVTWSFSRMPDSTLPGSRVLARLDRDSLVHS 342
Query: 93 KDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVS 130
+S V + S+ L + V ++ G Y C VS
Sbjct: 343 SPHVALSHVDAR----SYHLLVRDVSKENSGYYYCHVS 376
Score = 34.7 bits (78), Expect = 0.098
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 34 PKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRE----LLHELALSVPGARSK 89
P +++REG+ E+ C ++ L + W + P R L HE +
Sbjct: 154 PPSLSLREGEPFELRCTAASASPLHTHLALLWEVHRGPARRSVLALTHEGRFHPGLGYEQ 213
Query: 90 VTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDY--SDDDTQEHKAQAM-- 145
+ ++ TV G+D ++RL +S D+G Y C VS++ + QE + +A+
Sbjct: 214 RYHSGDVRLDTV---GSD-AYRLSVSRALSADQGSYRCIVSEWIAEQGNWQEIQEKAVEV 269
Query: 146 ------LRVLSRFAPPNMQAAE 161
VL P N+ AE
Sbjct: 270 ATVVIQPSVLRAAVPKNVSVAE 291
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 37.4 bits (85), Expect = 0.015
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 162 AVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAA 221
AV H GP GPA+ + AA R + PG PP PPAA P AA
Sbjct: 23 AVVHRGRPGPEGAGPAAGLDVR---AARREAASPGTPGPPPP---PPAASGPG---PGAA 73
Query: 222 SAAHTPTTTVAA------AAAASSASPPSGQAVLLRQRHGSGTG 259
+A H ++ A AA ASP S + G G
Sbjct: 74 AAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAPG 117
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 170 GPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTT 229
GP PA++ A AA + D PG+ P P A+++SAA +P++
Sbjct: 57 GPPPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASP----ASSSSAASSPSS 112
Query: 230 TVAAAAAASSAS 241
A AA S+A+
Sbjct: 113 GRAPGAAPSAAA 124
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 37.4 bits (85), Expect = 0.015
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 203 PPGSPPA-AIDPAVPEAAAASAAHTPTTTVAAAAAASSA-----SPPSG 245
PPG+PP+ PA P + A A H P AAAAA++A +PP G
Sbjct: 1314 PPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEG 1362
Score = 28.9 bits (63), Expect = 5.4
Identities = 23/86 (26%), Positives = 28/86 (32%), Gaps = 8/86 (9%)
Query: 167 QSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHT 226
+ +GP P S + N G R + G PP PPA E AH
Sbjct: 1157 REAGPEPPPPLSVYH-NGTGTVRRRPASEQAGPPELPPPPPPA-------EPPPTDLAHL 1208
Query: 227 PTTTVAAAAAASSASPPSGQAVLLRQ 252
P A A PP +L Q
Sbjct: 1209 PPLPPPEGEARKPAKPPVSPKPVLTQ 1234
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 37.4 bits (85), Expect = 0.015
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 159 AAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAA-----IDP 213
AA A + + ++ P PA+A+ + A +P PPP S PAA
Sbjct: 102 AAAAAAAVAAAPP---APAAASTVDTAAL-----KQPPAPPPPPPPVSAPAAEAAPPASA 153
Query: 214 AVPEAAAASAAHTPTTTVAAAAAASS 239
A AAAA+A PT+TVA A AS+
Sbjct: 154 ATIAAAAATAVVAPTSTVAVAPVASA 179
Score = 35.4 bits (80), Expect = 0.058
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 177 ASAANANNAGAASRTTSEPG-RGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAA 235
A+ A A A AA+ T + +PPP PP + PA A ASAA T+AAAA
Sbjct: 107 AAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSA-PAAEAAPPASAA-----TIAAAA 160
Query: 236 AASSASPPSGQAV 248
A + +P S AV
Sbjct: 161 ATAVVAPTSTVAV 173
Score = 30.8 bits (68), Expect = 1.4
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 16/71 (22%)
Query: 187 AASRTTSEPGRGDKSPPPGSPPAAIDP----------AVPEAAAASAAHTPTTTVAAAAA 236
A+ P + +PPP A +P A E+AAA+AA AAAAA
Sbjct: 54 ASQGCAQSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAA------AAAAAA 107
Query: 237 ASSASPPSGQA 247
A +A+PP+ A
Sbjct: 108 AVAAAPPAPAA 118
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 37.4 bits (85), Expect = 0.015
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 159 AAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAA-----IDP 213
AA A + + ++ P PA+A+ + A +P PPP S PAA
Sbjct: 102 AAAAAAAVAAAPP---APAAASTVDTAAL-----KQPPAPPPPPPPVSAPAAEAAPPASA 153
Query: 214 AVPEAAAASAAHTPTTTVAAAAAASS 239
A AAAA+A PT+TVA A AS+
Sbjct: 154 ATIAAAAATAVVAPTSTVAVAPVASA 179
Score = 35.4 bits (80), Expect = 0.058
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 177 ASAANANNAGAASRTTSEPG-RGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAA 235
A+ A A A AA+ T + +PPP PP + PA A ASAA T+AAAA
Sbjct: 107 AAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSA-PAAEAAPPASAA-----TIAAAA 160
Query: 236 AASSASPPSGQAV 248
A + +P S AV
Sbjct: 161 ATAVVAPTSTVAV 173
Score = 30.8 bits (68), Expect = 1.4
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 16/71 (22%)
Query: 187 AASRTTSEPGRGDKSPPPGSPPAAIDP----------AVPEAAAASAAHTPTTTVAAAAA 236
A+ P + +PPP A +P A E+AAA+AA AAAAA
Sbjct: 54 ASQGCAQSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAA------AAAAAA 107
Query: 237 ASSASPPSGQA 247
A +A+PP+ A
Sbjct: 108 AVAAAPPAPAA 118
>gi|208431824 forkhead box I3 [Homo sapiens]
Length = 420
Score = 37.4 bits (85), Expect = 0.015
Identities = 34/93 (36%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 153 APPNMQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAID 212
APP AA A ++ +GP GP SAA A AA+ P PPP P AA
Sbjct: 44 APP---AAAANPYLWLNGPGVGGPPSAA----AAAAAAYLGAP------PPPPPPGAAAG 90
Query: 213 PAV---PEAAAASAAHTPTTTVAAAAAASSASP 242
P + P A + P A AA AS A+P
Sbjct: 91 PFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAP 123
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 14/54 (25%)
Query: 204 PGSPPAAIDP------AVPEAAAAS--------AAHTPTTTVAAAAAASSASPP 243
PG+PPAA P A P AAAA+ P + AAAAAA +PP
Sbjct: 27 PGAPPAARAPYGLADYAAPPAAAANPYLWLNGPGVGGPPSAAAAAAAAYLGAPP 80
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 37.4 bits (85), Expect = 0.015
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 157 MQAAEAVSHIQSSGPRRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVP 216
M AAEA + + ++ A+AANAN + +AS T S G+ P +P V
Sbjct: 244 MAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVS-----------GTVPVVPEPEVT 292
Query: 217 EAAAASAAHTPTTTVAAAAAASSASPPS--GQAVLLRQRHGSGTGRSYT 263
A + T T++ A S P+ Q+V + G T + T
Sbjct: 293 SIVATVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQET 341
>gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]
Length = 732
Score = 37.0 bits (84), Expect = 0.020
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 206 SPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSA 240
SPP ++P+ P AAAA+AA PT +AAAAA++A
Sbjct: 41 SPPGPLEPS-PAAAAAAAAPAPTPAASAAAAAATA 74
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 37.0 bits (84), Expect = 0.020
Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 7/141 (4%)
Query: 112 LRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQAMLRVLSRFAPPNMQAAEAVSHIQSSGP 171
L SA L + ++ D+Q + ML L+ AP Q S P
Sbjct: 603 LPTSATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAPSPAQCV-------CSPP 655
Query: 172 RRHGPASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTV 231
GP + + GA + T+ PG S P + P ++ P+ A + A P +
Sbjct: 656 VSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPST 715
Query: 232 AAAAAASSASPPSGQAVLLRQ 252
+PP Q L Q
Sbjct: 716 PMPTGPGQPAPPGQQPPPLAQ 736
Score = 32.7 bits (73), Expect = 0.37
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 201 SPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSGQAVLLRQRHGSGTGR 260
S PPG+PPA + P+ P A AA A ++ P SG A Q G GT +
Sbjct: 1374 SNPPGAPPAPLAPSSPPVTAL------PQDGAAPATSTMPEPASGTA---SQAGGPGTPQ 1424
Query: 261 SYTTDPLLSLLLLALHK 277
T++ S L H+
Sbjct: 1425 GLTSELETSQPLAETHE 1441
Score = 28.1 bits (61), Expect = 9.2
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 176 PASAANANNAGAASRTTSEPGRGDKSPPPGSPPAAIDPAVPEAAAASAAHTPTTTVAAAA 235
PA A + +A R P + SP G+P A+ P AA A + A
Sbjct: 1458 PAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPLLPAAVGA-------VSLA 1510
Query: 236 AASSASPPSGQAV 248
+ SPP G V
Sbjct: 1511 TSQLPSPPLGPTV 1523
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,071,468
Number of Sequences: 37866
Number of extensions: 594169
Number of successful extensions: 11270
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 782
Number of HSP's that attempted gapping in prelim test: 7516
Number of HSP's gapped (non-prelim): 3569
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.