| Name: LOC100287960 | Sequence: fasta or formatted (124aa) | NCBI GI: 239750094 | |
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Description: PREDICTED: similar to HIG1 domain family, member 1A
| Not currently referenced in the text | ||
Other entries for this name:
alt mRNA {124aa} PREDICTED: hypothetical protein XP_002343136 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.9 11 2 C cysteine 0.0 0 0 D aspartate 5.6 7 1 E glutamate 9.7 12 2 F phenylalanine 3.2 4 1 G glycine 7.3 9 1 H histidine 3.2 4 1 I isoleucine 7.3 9 2 K lysine 5.6 7 1 L leucine 8.9 11 1 M methionine 4.8 6 1 N asparagine 1.6 2 1 P proline 3.2 4 1 Q glutamine 3.2 4 1 R arginine 4.0 5 1 S serine 6.5 8 2 T threonine 4.8 6 1 V valine 7.3 9 2 W tryptophan 0.8 1 1 Y tyrosine 4.0 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to HIG1 domain family, member 1A... LOC100292549 1.000 PREDICTED: similar to HIG1 domain family, member 1A... LOC100287960 1.000 PREDICTED: hypothetical protein XP_002343136 HIGD1A 0.694 HIG1 domain family, member 1A isoform a HIGD1A 0.644 HIG1 domain family, member 1A isoform b HIGD1A 0.644 HIG1 domain family, member 1A isoform b HIGD1C 0.356 HIG1 domain family, member 1C HIGD1B 0.270 HIG1 hypoxia inducible domain family, member 1B [Homo... HIGD2A 0.167 HIG1 hypoxia inducible domain family, member 2A [Hom... PDCL3 0.068 phosducin-like 3 LOC100132514 0.036 PREDICTED: similar to HIG1 domain family, member 2A... PDCL2 0.014 phosducin-like 2 CHMP6 0.014 chromatin modifying protein 6 GTPBP4 0.014 G protein-binding protein CRFG GPIHBP1 0.009 glycosylphosphatidylinositol anchored high density l... AKAP9 0.009 A-kinase anchor protein 9 isoform 2 MGA 0.005 MAX gene associated KIAA1704 0.005 hypothetical protein LOC55425 TTN 0.005 titin isoform N2-A PCDHGB6 0.005 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB6 0.005 protocadherin gamma subfamily B, 6 isoform 2 precurs...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
