CHMP6 25507

Name: CHMP6	Sequence: fasta or formatted (201aa)		NCBI GI: 31542673
Description: chromatin modifying protein 6		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 14 2 C cysteine 0.5 1 1 D aspartate 4.0 8 1 E glutamate 14.4 29 2 F phenylalanine 2.0 4 1 G glycine 3.0 6 1 H histidine 0.5 1 1 I isoleucine 6.0 12 1 K lysine 7.5 15 3 L leucine 11.9 24 3 M methionine 3.0 6 1 N asparagine 2.5 5 1 P proline 3.5 7 1 Q glutamine 11.9 24 2 R arginine 8.5 17 1 S serine 4.5 9 2 T threonine 3.0 6 1 V valine 5.0 10 1 W tryptophan 0.0 0 0 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromatin modifying protein 6 CHMP4A 0.164 chromatin modifying protein 4A CHMP4C 0.142 chromatin modifying protein 4C CHMP4B 0.117 chromatin modifying protein 4B LOC647042 0.056 PREDICTED: hypothetical protein isoform 1 ITSN1 0.056 intersectin 1 isoform ITSN-s ITSN1 0.056 intersectin 1 isoform ITSN-l LOC100133220 0.053 PREDICTED: hypothetical protein LOC400352 0.053 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.053 PREDICTED: similar to Putative golgin subfamily A m... NDE1 0.053 nuclear distribution gene E homolog 1 NDE1 0.053 nuclear distribution gene E homolog 1 TNIK 0.053 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.053 TRAF2 and NCK interacting kinase isoform 7 KIF7 0.050 kinesin family member 7 PASD1 0.050 PAS domain containing 1 TCHH 0.047 trichohyalin FILIP1L 0.047 filamin A interacting protein 1-like isoform 3 [Hom... FILIP1L 0.047 filamin A interacting protein 1-like isoform 1 [Hom... CCDC11 0.047 coiled-coil domain containing 11 VPS24 0.047 vacuolar protein sorting 24 isoform 1 MYO5C 0.047 myosin VC SLK 0.047 serine/threonine kinase 2 DCTN1 0.045 dynactin 1 isoform 4 DCTN1 0.045 dynactin 1 isoform 3 DCTN1 0.045 dynactin 1 isoform 2 DCTN1 0.045 dynactin 1 isoform 1 BAT2D1 0.045 HBxAg transactivated protein 2 ZNF853 0.042 zinc finger protein 853 MYH9 0.042 myosin, heavy polypeptide 9, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.