HIGD1C 6411

Name: HIGD1C	Sequence: fasta or formatted (97aa)		NCBI GI: 157817101
Description: HIG1 domain family, member 1C		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 5 2 C cysteine 1.0 1 1 D aspartate 6.2 6 1 E glutamate 3.1 3 1 F phenylalanine 5.2 5 2 G glycine 7.2 7 1 H histidine 2.1 2 1 I isoleucine 6.2 6 1 K lysine 7.2 7 2 L leucine 7.2 7 1 M methionine 4.1 4 1 N asparagine 1.0 1 1 P proline 3.1 3 1 Q glutamine 4.1 4 1 R arginine 8.2 8 2 S serine 11.3 11 2 T threonine 2.1 2 1 V valine 9.3 9 2 W tryptophan 1.0 1 1 Y tyrosine 5.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HIG1 domain family, member 1C HIGD1A 0.485 HIG1 domain family, member 1A isoform b HIGD1A 0.485 HIG1 domain family, member 1A isoform a HIGD1A 0.485 HIG1 domain family, member 1A isoform b LOC100292549 0.462 PREDICTED: similar to HIG1 domain family, member 1A... LOC100287960 0.462 PREDICTED: similar to HIG1 domain family, member 1A... LOC100287960 0.462 PREDICTED: hypothetical protein XP_002343136 HIGD1B 0.380 HIG1 hypoxia inducible domain family, member 1B [Homo... HIGD2A 0.140 HIG1 hypoxia inducible domain family, member 2A [Hom... LOC100132514 0.018 PREDICTED: similar to HIG1 domain family, member 2A... STT3B 0.012 source of immunodominant MHC-associated peptides [Ho... MAGEA11 0.006 melanoma antigen family A, 11 isoform b MAGEA11 0.006 melanoma antigen family A, 11 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.