HIGD1A 5233

Name: HIGD1A	Sequence: fasta or formatted (93aa)		NCBI GI: 153085470
Description: HIG1 domain family, member 1A isoform b		Not currently referenced in the text
Other entries for this name: alt prot {107aa} HIG1 domain family, member 1A isoform a alt mRNA {93aa} HIG1 domain family, member 1A isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 10 2 C cysteine 0.0 0 0 D aspartate 2.2 2 1 E glutamate 4.3 4 2 F phenylalanine 4.3 4 1 G glycine 10.8 10 1 H histidine 2.2 2 1 I isoleucine 5.4 5 1 K lysine 8.6 8 1 L leucine 5.4 5 1 M methionine 6.5 6 1 N asparagine 1.1 1 1 P proline 5.4 5 1 Q glutamine 2.2 2 1 R arginine 4.3 4 1 S serine 7.5 7 1 T threonine 4.3 4 1 V valine 8.6 8 2 W tryptophan 1.1 1 1 Y tyrosine 5.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HIG1 domain family, member 1A isoform b HIGD1A 1.000 HIG1 domain family, member 1A isoform a HIGD1A 1.000 HIG1 domain family, member 1A isoform b LOC100292549 0.872 PREDICTED: similar to HIG1 domain family, member 1A... LOC100287960 0.872 PREDICTED: similar to HIG1 domain family, member 1A... LOC100287960 0.872 PREDICTED: hypothetical protein XP_002343136 HIGD1C 0.506 HIG1 domain family, member 1C HIGD1B 0.390 HIG1 hypoxia inducible domain family, member 1B [Homo... HIGD2A 0.183 HIG1 hypoxia inducible domain family, member 2A [Hom... LOC100132514 0.012 PREDICTED: similar to HIG1 domain family, member 2A... SLC39A11 0.006 solute carrier family 39, member 11 isoform 1 [Homo... SLC39A11 0.006 solute carrier family 39, member 11 isoform 2 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.