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Search of human proteins with 239749583
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749583 PREDICTED: similar to hCG1794531 [Homo sapiens]
(277 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749583 PREDICTED: similar to hCG1794531 [Homo sapiens] 578 e-165
gi|239743799 PREDICTED: similar to hCG1794531 [Homo sapiens] 512 e-145
gi|239743758 PREDICTED: similar to hCG1794531 [Homo sapiens] 512 e-145
gi|6005737 cytochrome P450, family 4, subfamily F, polypeptide 8... 62 5e-10
gi|193083180 cytochrome P450 family 4 subfamily F polypeptide 11... 60 2e-09
gi|193083178 cytochrome P450 family 4 subfamily F polypeptide 11... 60 2e-09
gi|13435391 cytochrome P450, family 4, subfamily F, polypeptide ... 58 1e-08
gi|119220562 cytochrome P450, family 4, subfamily F, polypeptide... 58 1e-08
gi|150036266 cytochrome P450, family 4, subfamily F, polypeptide... 52 7e-07
gi|239757171 PREDICTED: similar to cytochrome P450, family 4, su... 44 1e-04
gi|239751683 PREDICTED: similar to cytochrome P450, family 4, su... 44 1e-04
gi|239746187 PREDICTED: similar to cytochrome P450, family 4, su... 44 1e-04
gi|158138530 cytochrome P450, family 4, subfamily F, polypeptide... 37 0.019
gi|226693407 TBC1 domain family, member 3H [Homo sapiens] 30 2.3
gi|14149985 TBC1 domain family, member 3F [Homo sapiens] 30 2.3
gi|183583565 TBC1 domain family, member 3 [Homo sapiens] 30 2.3
gi|183583567 TBC1 domain family, member 3E [Homo sapiens] 30 2.3
gi|149999613 TBC1 domain family, member 3B [Homo sapiens] 30 2.3
gi|183583563 TBC1 domain family, member 3D [Homo sapiens] 30 2.3
gi|90577185 TBC1 domain family member 3C [Homo sapiens] 30 2.3
gi|157502205 TBC1 domain family, member 3G [Homo sapiens] 30 2.3
gi|222831587 tRNA methyltransferase 61 homolog B [Homo sapiens] 29 3.9
gi|21361241 ephrin receptor EphA3 isoform a precursor [Homo sapi... 29 3.9
gi|31542835 galactose-3-O-sulfotransferase 4 [Homo sapiens] 29 5.2
gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens] 28 6.7
gi|55956904 mitogen-activated protein kinase kinase kinase 4 iso... 28 6.7
gi|55956902 mitogen-activated protein kinase kinase kinase 4 iso... 28 6.7
gi|156547246 zinc finger protein 160 [Homo sapiens] 28 8.8
gi|38788302 zinc finger protein 160 [Homo sapiens] 28 8.8
gi|38788288 zinc finger protein 160 [Homo sapiens] 28 8.8
>gi|239749583 PREDICTED: similar to hCG1794531 [Homo sapiens]
Length = 277
Score = 578 bits (1489), Expect = e-165
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MFHLIAKISDRLHRKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWTSATFGETCH 60
MFHLIAKISDRLHRKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWTSATFGETCH
Sbjct: 1 MFHLIAKISDRLHRKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWTSATFGETCH 60
Query: 61 VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS 120
VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS
Sbjct: 61 VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS 120
Query: 121 DAFVLSKVGFSGILIQEDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT 180
DAFVLSKVGFSGILIQEDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT
Sbjct: 121 DAFVLSKVGFSGILIQEDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT 180
Query: 181 QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL 240
QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL
Sbjct: 181 QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL 240
Query: 241 GSKWVTVMYAYKPQAHGWRLFSHSYLIKSSNEKHAQC 277
GSKWVTVMYAYKPQAHGWRLFSHSYLIKSSNEKHAQC
Sbjct: 241 GSKWVTVMYAYKPQAHGWRLFSHSYLIKSSNEKHAQC 277
>gi|239743799 PREDICTED: similar to hCG1794531 [Homo sapiens]
Length = 295
Score = 512 bits (1319), Expect = e-145
Identities = 247/250 (98%), Positives = 248/250 (99%)
Query: 1 MFHLIAKISDRLHRKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWTSATFGETCH 60
MFHLIAKISDRLHRKKWL VLNDQKKSRSSKKTIKENSKRSPANIYRWPW SATFGETCH
Sbjct: 1 MFHLIAKISDRLHRKKWLKVLNDQKKSRSSKKTIKENSKRSPANIYRWPWISATFGETCH 60
Query: 61 VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS 120
VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS
Sbjct: 61 VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS 120
Query: 121 DAFVLSKVGFSGILIQEDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT 180
DAFVLSKVGFSGILIQ+DENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT
Sbjct: 121 DAFVLSKVGFSGILIQKDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT 180
Query: 181 QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL 240
QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL
Sbjct: 181 QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL 240
Query: 241 GSKWVTVMYA 250
GSKWVTVMYA
Sbjct: 241 GSKWVTVMYA 250
>gi|239743758 PREDICTED: similar to hCG1794531 [Homo sapiens]
Length = 295
Score = 512 bits (1319), Expect = e-145
Identities = 247/250 (98%), Positives = 248/250 (99%)
Query: 1 MFHLIAKISDRLHRKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWTSATFGETCH 60
MFHLIAKISDRLHRKKWL VLNDQKKSRSSKKTIKENSKRSPANIYRWPW SATFGETCH
Sbjct: 1 MFHLIAKISDRLHRKKWLKVLNDQKKSRSSKKTIKENSKRSPANIYRWPWISATFGETCH 60
Query: 61 VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS 120
VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS
Sbjct: 61 VLGGLRHRVRPMGLEDPRAGPATWGTTLDTIILERHCTLTSQGVDDFLNAKATFKIFDFS 120
Query: 121 DAFVLSKVGFSGILIQEDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT 180
DAFVLSKVGFSGILIQ+DENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT
Sbjct: 121 DAFVLSKVGFSGILIQKDENKEELSDKDIYMEAGIFVSANRGPGVDYCGNRGLSIQGHGT 180
Query: 181 QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL 240
QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL
Sbjct: 181 QCMGTVQPLVLKQPRDPSLPGCHLGYDSTASGLYWILTFTRLNFTLSSDSHLIVYPMESL 240
Query: 241 GSKWVTVMYA 250
GSKWVTVMYA
Sbjct: 241 GSKWVTVMYA 250
>gi|6005737 cytochrome P450, family 4, subfamily F, polypeptide 8
[Homo sapiens]
Length = 520
Score = 62.0 bits (149), Expect = 5e-10
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKD 148
D +I ER TLTSQGVDDFL AKA K DF D +LS ED+N +ELSD+D
Sbjct: 268 DAVIQERRRTLTSQGVDDFLQAKAKSKTLDFIDVLLLS----------EDKNGKELSDED 317
Query: 149 IYMEAGIFV 157
I EA F+
Sbjct: 318 IRAEADTFM 326
>gi|193083180 cytochrome P450 family 4 subfamily F polypeptide 11
[Homo sapiens]
Length = 524
Score = 60.1 bits (144), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKD 148
D +I ER CTL +QG+DDFL KA K DF D +LSK DE+ +ELSD+D
Sbjct: 268 DAVIQERRCTLPTQGIDDFLKNKAKSKTLDFIDVLLLSK----------DEDGKELSDED 317
Query: 149 IYMEAGIFV 157
I EA F+
Sbjct: 318 IRAEADTFM 326
>gi|193083178 cytochrome P450 family 4 subfamily F polypeptide 11
[Homo sapiens]
Length = 524
Score = 60.1 bits (144), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKD 148
D +I ER CTL +QG+DDFL KA K DF D +LSK DE+ +ELSD+D
Sbjct: 268 DAVIQERRCTLPTQGIDDFLKNKAKSKTLDFIDVLLLSK----------DEDGKELSDED 317
Query: 149 IYMEAGIFV 157
I EA F+
Sbjct: 318 IRAEADTFM 326
>gi|13435391 cytochrome P450, family 4, subfamily F, polypeptide 2
[Homo sapiens]
Length = 520
Score = 57.8 bits (138), Expect = 1e-08
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKD 148
D +I ER TL SQGVDDFL AKA K DF D +LSK DE+ ++LSD+D
Sbjct: 268 DAVIQERRRTLPSQGVDDFLQAKAKSKTLDFIDVLLLSK----------DEDGKKLSDED 317
Query: 149 IYMEAGIFV 157
I EA F+
Sbjct: 318 IRAEADTFM 326
>gi|119220562 cytochrome P450, family 4, subfamily F, polypeptide 3
[Homo sapiens]
Length = 520
Score = 57.8 bits (138), Expect = 1e-08
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKD 148
D +I ER TL SQGVDDFL AKA K DF D +LSK DE+ ++LSD+D
Sbjct: 268 DAVIQERRRTLPSQGVDDFLQAKAKSKTLDFIDVLLLSK----------DEDGKKLSDED 317
Query: 149 IYMEAGIFV 157
I EA F+
Sbjct: 318 IRAEADTFM 326
>gi|150036266 cytochrome P450, family 4, subfamily F, polypeptide 12
[Homo sapiens]
Length = 524
Score = 51.6 bits (122), Expect = 7e-07
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKD 148
D +I ER TL +QG+DDF KA K DF D +LSK DE+ + LSD+D
Sbjct: 268 DAVIRERRRTLPTQGIDDFFKDKAKSKTLDFIDVLLLSK----------DEDGKALSDED 317
Query: 149 IYMEAGIFV 157
I EA F+
Sbjct: 318 IRAEADTFM 326
>gi|239757171 PREDICTED: similar to cytochrome P450, family 4,
subfamily F, polypeptide 2 [Homo sapiens]
Length = 190
Score = 44.3 bits (103), Expect = 1e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILI 135
D I E+ TL SQGVDDFL AKA K DF D ++SK G ++
Sbjct: 119 DAAIQEKRHTLPSQGVDDFLQAKAKSKTLDFIDVLLISKAMTPGPVV 165
>gi|239751683 PREDICTED: similar to cytochrome P450, family 4,
subfamily F, polypeptide 2 [Homo sapiens]
Length = 190
Score = 44.3 bits (103), Expect = 1e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILI 135
D I E+ TL SQGVDDFL AKA K DF D ++SK G ++
Sbjct: 119 DAAIQEKRHTLPSQGVDDFLQAKAKSKTLDFIDVLLISKAMTPGPVV 165
>gi|239746187 PREDICTED: similar to cytochrome P450, family 4,
subfamily F, polypeptide 2 [Homo sapiens]
Length = 190
Score = 44.3 bits (103), Expect = 1e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 89 DTIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILI 135
D I E+ TL SQGVDDFL AKA K DF D ++SK G ++
Sbjct: 119 DAAIQEKRHTLPSQGVDDFLQAKAKSKTLDFIDVLLISKAMTPGPVV 165
>gi|158138530 cytochrome P450, family 4, subfamily F, polypeptide 22
[Homo sapiens]
Length = 531
Score = 37.0 bits (84), Expect = 0.019
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 91 IILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKDIY 150
+I ER L QG + +L AK K DF D +L++ DE+ +ELSD+DI
Sbjct: 278 VIQERRRALRQQGAEAWLKAKQG-KTLDFIDVLLLAR----------DEDGKELSDEDIR 326
Query: 151 MEAGIFV 157
EA F+
Sbjct: 327 AEADTFM 333
>gi|226693407 TBC1 domain family, member 3H [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|14149985 TBC1 domain family, member 3F [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|183583565 TBC1 domain family, member 3 [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|183583567 TBC1 domain family, member 3E [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|149999613 TBC1 domain family, member 3B [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|183583563 TBC1 domain family, member 3D [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|90577185 TBC1 domain family member 3C [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|157502205 TBC1 domain family, member 3G [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 RKKWLTVLNDQKKSRSSKKTIKENSKRSPANIYRWPWT 51
+ KW+ +L D +K +SS+K I K P NI W+
Sbjct: 75 KSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWS 112
>gi|222831587 tRNA methyltransferase 61 homolog B [Homo sapiens]
Length = 477
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 161 RGPGVDYCGNRGLSIQGHGTQCMGTVQPLVLKQPRDPSLP 200
+ PG + C + LSI GT C+ +++ L L R+ S P
Sbjct: 60 KAPGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSP 99
>gi|21361241 ephrin receptor EphA3 isoform a precursor [Homo
sapiens]
Length = 983
Score = 29.3 bits (64), Expect = 3.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 5 IAKISDRLHRKKWLTVLNDQKKSRSSKKTIKENSKRSPANI 45
IAKIS +K +TV+ QKK SS K ++ SK P +
Sbjct: 943 IAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV 983
>gi|31542835 galactose-3-O-sulfotransferase 4 [Homo sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 5.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 93 LERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDKDI 149
L +HC + + D F+ F F A VL + SG+ Q+ E E L+ ++
Sbjct: 403 LAKHCLVGGEASDPKYITDRRFRPFQFGSAKVLGYILRSGLSPQDQEECERLATPEL 459
>gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens]
Length = 814
Score = 28.5 bits (62), Expect = 6.7
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 74 LEDPRAGPATWGTTLDTIILERHCTLTSQGVDDF--LNAKATFK 115
L+ AGP T GTT+DT LE +T D +N+ T K
Sbjct: 744 LKKAEAGPVTLGTTVDTTHLENPKAVTPASAPDCTPVNSATTLK 787
>gi|55956904 mitogen-activated protein kinase kinase kinase 4
isoform a [Homo sapiens]
Length = 1608
Score = 28.5 bits (62), Expect = 6.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 102 QGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQ 136
Q + D +N TFK+ S AFV + GF+G ++
Sbjct: 289 QAIPDIINEILTFKVDYGSFAFVRDRAGFNGTSVE 323
>gi|55956902 mitogen-activated protein kinase kinase kinase 4
isoform b [Homo sapiens]
Length = 1558
Score = 28.5 bits (62), Expect = 6.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 102 QGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQ 136
Q + D +N TFK+ S AFV + GF+G ++
Sbjct: 289 QAIPDIINEILTFKVDYGSFAFVRDRAGFNGTSVE 323
>gi|156547246 zinc finger protein 160 [Homo sapiens]
Length = 818
Score = 28.1 bits (61), Expect = 8.8
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 90 TIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDK 147
T++LERH S ++DF + + DF + + G+L+ + E K + D+
Sbjct: 115 TVVLERH---ESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDR 169
>gi|38788302 zinc finger protein 160 [Homo sapiens]
Length = 818
Score = 28.1 bits (61), Expect = 8.8
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 90 TIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDK 147
T++LERH S ++DF + + DF + + G+L+ + E K + D+
Sbjct: 115 TVVLERH---ESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDR 169
>gi|38788288 zinc finger protein 160 [Homo sapiens]
Length = 818
Score = 28.1 bits (61), Expect = 8.8
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 90 TIILERHCTLTSQGVDDFLNAKATFKIFDFSDAFVLSKVGFSGILIQEDENKEELSDK 147
T++LERH S ++DF + + DF + + G+L+ + E K + D+
Sbjct: 115 TVVLERH---ESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDR 169
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,937,600
Number of Sequences: 37866
Number of extensions: 492398
Number of successful extensions: 1055
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1016
Number of HSP's gapped (non-prelim): 38
length of query: 277
length of database: 18,247,518
effective HSP length: 101
effective length of query: 176
effective length of database: 14,423,052
effective search space: 2538457152
effective search space used: 2538457152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.