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Search of human proteins with 117676370
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117676370 tumor necrosis factor, alpha-induced protein 8
isoform b [Homo sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117676370 tumor necrosis factor, alpha-induced protein 8 isof... 374 e-104
gi|117676365 tumor necrosis factor, alpha-induced protein 8 isof... 373 e-104
gi|59709436 tumor necrosis factor, alpha-induced protein 8-like ... 258 3e-69
gi|22748781 tumor necrosis factor, alpha-induced protein 8-like ... 231 2e-61
gi|157389001 tumor necrosis factor, alpha-induced protein 8-like... 208 2e-54
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 32 0.25
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 32 0.25
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 32 0.25
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom... 32 0.25
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 32 0.25
gi|27734883 tripartite motif family-like 2 [Homo sapiens] 32 0.25
gi|55749678 ninein-like [Homo sapiens] 30 1.6
gi|187608516 centaurin, beta 2 [Homo sapiens] 30 1.6
gi|6912236 angiopoietin-like 2 precursor [Homo sapiens] 30 1.6
gi|38016947 complement component 5 preproprotein [Homo sapiens] 29 2.1
gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a [Hom... 29 2.7
gi|227497884 brain-enriched guanylate kinase-associated protein ... 28 3.6
gi|13124765 brain-enriched guanylate kinase-associated protein [... 28 3.6
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 28 3.6
gi|71061468 centromere protein E [Homo sapiens] 28 4.7
gi|194239705 dedicator of cytokinesis 9 isoform b [Homo sapiens] 28 6.1
gi|24308029 dedicator of cytokinesis 9 isoform a [Homo sapiens] 28 6.1
gi|47132534 STAM binding protein [Homo sapiens] 28 6.1
gi|42519912 STAM binding protein [Homo sapiens] 28 6.1
gi|5453545 STAM binding protein [Homo sapiens] 28 6.1
gi|105990532 apolipoprotein B precursor [Homo sapiens] 27 7.9
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 27 7.9
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 27 7.9
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 27 7.9
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 27 7.9
>gi|117676370 tumor necrosis factor, alpha-induced protein 8 isoform
b [Homo sapiens]
Length = 188
Score = 374 bits (961), Expect = e-104
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEK 60
MATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEK
Sbjct: 1 MATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEK 60
Query: 61 IIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSR 120
IIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSR
Sbjct: 61 IIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSR 120
Query: 121 LLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGIN 180
LLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGIN
Sbjct: 121 LLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGIN 180
Query: 181 KMLDEENI 188
KMLDEENI
Sbjct: 181 KMLDEENI 188
>gi|117676365 tumor necrosis factor, alpha-induced protein 8 isoform
a [Homo sapiens]
Length = 198
Score = 373 bits (957), Expect = e-104
Identities = 187/188 (99%), Positives = 188/188 (100%)
Query: 1 MATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEK 60
+ATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEK
Sbjct: 11 VATDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEK 70
Query: 61 IIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSR 120
IIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSR
Sbjct: 71 IIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSR 130
Query: 121 LLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGIN 180
LLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGIN
Sbjct: 131 LLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGIN 190
Query: 181 KMLDEENI 188
KMLDEENI
Sbjct: 191 KMLDEENI 198
>gi|59709436 tumor necrosis factor, alpha-induced protein 8-like 3
[Homo sapiens]
Length = 292
Score = 258 bits (658), Expect = 3e-69
Identities = 115/183 (62%), Positives = 164/183 (89%)
Query: 4 DVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIK 63
DVF+SK+LA+QAQKKIL K+ SK++A LIDDTSSE+ DELY+VT+E+T NKKEA KI+K
Sbjct: 108 DVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMK 167
Query: 64 NLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLN 123
+LIK IK+ ILYRNNQF+Q+EL ++EKF+KK++Q AMT+VSF++V+YTFDRNVLS LL+
Sbjct: 168 DLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLH 227
Query: 124 ECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGINKML 183
EC++++H+++QRHLT ++HGR+N+VF+HF+D EFL+ LY+ G+ +P+L+++C+GINK+L
Sbjct: 228 ECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLL 287
Query: 184 DEE 186
DE+
Sbjct: 288 DEK 290
>gi|22748781 tumor necrosis factor, alpha-induced protein 8-like 1
[Homo sapiens]
Length = 186
Score = 231 bits (590), Expect = 2e-61
Identities = 105/185 (56%), Positives = 148/185 (80%)
Query: 4 DVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIK 63
D F++K+LA+QAQKK+L KM SK++ L+DDTSSEVLDELYR TRE+T+++KEA+K++K
Sbjct: 2 DTFSTKSLALQAQKKLLSKMASKAVVAVLVDDTSSEVLDELYRATREFTRSRKEAQKMLK 61
Query: 64 NLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLN 123
NL+K +KL +L R +Q +ELAL+ +F+ + LAMT VSFHQVD+TFDR VL+ L
Sbjct: 62 NLVKVALKLGLLLRGDQLGGEELALLRRFRHRARCLAMTAVSFHQVDFTFDRRVLAVGLL 121
Query: 124 ECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGINKML 183
ECR++LHQ + HLTAKSHGR+N+VF H +DC+FLAALY P ++ HL+++C+G+ +ML
Sbjct: 122 ECRDLLHQAVGPHLTAKSHGRINHVFGHLADCDFLAALYGPAEPYRSHLRRICEGLGRML 181
Query: 184 DEENI 188
DE ++
Sbjct: 182 DEGSL 186
>gi|157389001 tumor necrosis factor, alpha-induced protein 8-like 2
[Homo sapiens]
Length = 184
Score = 208 bits (530), Expect = 2e-54
Identities = 99/180 (55%), Positives = 140/180 (77%), Gaps = 2/180 (1%)
Query: 6 FNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNL 65
F+SK+LA+QA+KK+L KM +S+A ID+TSSEVLDELYRV++EYT ++ +A+++IK+L
Sbjct: 4 FSSKSLALQAEKKLLSKMAGRSVAHLFIDETSSEVLDELYRVSKEYTHSRPQAQRVIKDL 63
Query: 66 IKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNEC 125
IK IK+A+L+RN F ELAL +F++K+ Q AMT +SF +VD+TF+ VL+ LL EC
Sbjct: 64 IKVAIKVAVLHRNGSFGPSELALATRFRQKLRQGAMTALSFGEVDFTFEAAVLAGLLTEC 123
Query: 126 REMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGINKMLDE 185
R++L ++++ HLT KSHGR+ +VFDHFSD L ALY P +F HL K+CDG+ K+LDE
Sbjct: 124 RDVLLELVEHHLTPKSHGRIRHVFDHFSDPGLLTALYGP--DFTQHLGKICDGLRKLLDE 181
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 32.3 bits (72), Expect = 0.25
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 10 NLAVQAQKKILGKMVSKSIATT---LIDDTSSEVLDELYRVTREYTQNKKEAEKII---K 63
NL ++ + + VS+ + + +IDD + ++LD VT++YT+ K E EK++
Sbjct: 722 NLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLD----VTQKYTEKKLEMEKLLLEND 777
Query: 64 NLIKTVIKLAILYRNNQFNQDELALME----KFKKKVHQLAMTVVSFHQVDYTFDRNVLS 119
+L K V +L ++ + ++ E+ ++ + KK++ +L D+ +
Sbjct: 778 SLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGE--------DQEKIH 829
Query: 120 RLLNECREMLHQIIQRHLTAKSHGRV 145
L +E + + +++ K+H V
Sbjct: 830 ALTSENTNLKKMMSNQYVPVKTHEEV 855
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 32.3 bits (72), Expect = 0.25
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 10 NLAVQAQKKILGKMVSKSIATT---LIDDTSSEVLDELYRVTREYTQNKKEAEKII---K 63
NL ++ + + VS+ + + +IDD + ++LD VT++YT+ K E EK++
Sbjct: 735 NLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLD----VTQKYTEKKLEMEKLLLEND 790
Query: 64 NLIKTVIKLAILYRNNQFNQDELALME----KFKKKVHQLAMTVVSFHQVDYTFDRNVLS 119
+L K V +L ++ + ++ E+ ++ + KK++ +L D+ +
Sbjct: 791 SLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGE--------DQEKIH 842
Query: 120 RLLNECREMLHQIIQRHLTAKSHGRV 145
L +E + + +++ K+H V
Sbjct: 843 ALTSENTNLKKMMSNQYVPVKTHEEV 868
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 40 VLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQL 99
V+DE R+T + T +++ +++ N +T KLA+ Q + + +EK +L
Sbjct: 242 VVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEARVQEEEQKATRLEK------EL 295
Query: 100 AMTVVSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLTAKS 141
FHQ T ++++L NE + ++ +Q+ L A S
Sbjct: 296 QTQTTKFHQDQDT----IMAKLTNE--DSQNRQLQQKLAALS 331
>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
sapiens]
Length = 893
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 40 VLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQL 99
V+DE R+T + T +++ +++ N +T KLA+ Q + + +EK +L
Sbjct: 2 VVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEARVQEEEQKATRLEK------EL 55
Query: 100 AMTVVSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLTAKS 141
FHQ T ++++L NE + ++ +Q+ L A S
Sbjct: 56 QTQTTKFHQDQDT----IMAKLTNE--DSQNRQLQQKLAALS 91
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 40 VLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQL 99
V+DE R+T + T +++ +++ N +T KLA+ Q + + +EK +L
Sbjct: 242 VVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEARVQEEEQKATRLEK------EL 295
Query: 100 AMTVVSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLTAKS 141
FHQ T ++++L NE + ++ +Q+ L A S
Sbjct: 296 QTQTTKFHQDQDT----IMAKLTNE--DSQNRQLQQKLAALS 331
>gi|27734883 tripartite motif family-like 2 [Homo sapiens]
Length = 387
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 31 TLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALME 90
T +++ E+L L RV RE + KE+E +++++KL I+ + + LAL++
Sbjct: 99 TELEEMFQEMLQRLGRVGRENMEKLKESEARASEQVRSLLKL-IVELEKKCGEGTLALLK 157
Query: 91 KFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLT 138
K + + ++ + + D LS + +++QRHLT
Sbjct: 158 NAKYSLERSKSLLLEHLEPAHITD---LSLCHIRGLSSMFRVLQRHLT 202
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 29.6 bits (65), Expect = 1.6
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 31 TLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALME 90
TL+ + V EL + +KE E + K+ K ++ +L R NQ +D+L+
Sbjct: 1094 TLLKNDLGRVRQELEAAESTHDAQRKEIEVLKKDKEKACSEMEVLNRQNQNYKDQLS--- 1150
Query: 91 KFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREML 129
+ +V QL S HQ R + L E++
Sbjct: 1151 QLNVRVLQLGQE-ASTHQAQNEEHRVTIQMLTQSLEEVV 1188
>gi|187608516 centaurin, beta 2 [Homo sapiens]
Length = 778
Score = 29.6 bits (65), Expect = 1.6
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 30 TTLIDDTSSEVLDELYRVTRE----YTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDE 85
T L D T + +L +E + KK+ EK+ + ++K A + RN Q +E
Sbjct: 95 TILFDQTQRSIKAQLQNFVKEDLRKFKDAKKQFEKVSEEKENALVKNAQVQRNKQHEVEE 154
Query: 86 LA-LMEKFKKKVHQLAMTVVSFHQVDYTFDRNVL-SRLLNECREMLHQIIQRHLTAKSHG 143
++ +K +A+ DY NVL S+ +E + + + HL G
Sbjct: 155 ATNILTATRKCFRHIAL--------DYVLQINVLQSKRRSEILKSMLSFMYAHLAFFHQG 206
Query: 144 RVNNVFDHFSD 154
+D FS+
Sbjct: 207 -----YDLFSE 212
>gi|6912236 angiopoietin-like 2 precursor [Homo sapiens]
Length = 493
Score = 29.6 bits (65), Expect = 1.6
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 46 RVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMT--- 102
RVT N KE E +++N + K + NN EL ++ + + QL
Sbjct: 64 RVTGAICVNSKEPEVLLENRVH---KQELELLNN-----ELLKQKRQIETLQQLVEVDGG 115
Query: 103 VVSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLTAKSHGRV-NNVFDHFSDCEFLAAL 161
+VS ++ RN+ SR+ ++LH+II++ A ++ N + + +D LA+
Sbjct: 116 IVSEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENRILNQTADMLQLASK 175
Query: 162 YNPFGNFKPHLQKLCDGINKML 183
Y + HL L ++++
Sbjct: 176 YKDLEHKYQHLATLAHNQSEII 197
>gi|38016947 complement component 5 preproprotein [Homo sapiens]
Length = 1676
Score = 29.3 bits (64), Expect = 2.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 79 NQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTF 113
N F+ D L +K KKK+ + ++++S+ DY++
Sbjct: 1032 NIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSY 1066
>gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a [Homo
sapiens]
Length = 1464
Score = 28.9 bits (63), Expect = 2.7
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 25/129 (19%)
Query: 68 TVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVL-----SRLL 122
TV + +IL+ N QF D + +F V++L S VD D +L S +
Sbjct: 532 TVDERSILWLN-QFLLDLKQSLNQFMA-VYKLNDNSKSDEHVDVRVDGLMLKFVIPSEVK 589
Query: 123 NECREMLHQIIQ-----------RHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPH 171
+EC + + I RH H + +F F DC+F + Y F
Sbjct: 590 SECHQDQPRAISIQSSEMIATNTRHCPNCRHSDLEALFQDFKDCDFFSKTYTSF------ 643
Query: 172 LQKLCDGIN 180
K CD N
Sbjct: 644 -PKSCDNFN 651
>gi|227497884 brain-enriched guanylate kinase-associated protein
[Homo sapiens]
Length = 593
Score = 28.5 bits (62), Expect = 3.6
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 12 AVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIK 71
A+Q QK L K +S + T ++ +E + + E + ++E EK+ + L +
Sbjct: 6 ALQEQKGELRKRLSYT--THKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 63
Query: 72 LAILYRNNQFNQDELALM-EKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLH 130
L R NQ +D+L M + ++++ L+ +V+ + + + V L+E E+
Sbjct: 64 YMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALN--SHLLEAKVTIDKLSEDNELYR 121
Query: 131 Q----IIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 162
+ Q ++++GRV+ V + SD + +L+
Sbjct: 122 KDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLH 157
>gi|13124765 brain-enriched guanylate kinase-associated protein
[Homo sapiens]
Length = 593
Score = 28.5 bits (62), Expect = 3.6
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 12 AVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIK 71
A+Q QK L K +S + T ++ +E + + E + ++E EK+ + L +
Sbjct: 6 ALQEQKGELRKRLSYT--THKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 63
Query: 72 LAILYRNNQFNQDELALM-EKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLH 130
L R NQ +D+L M + ++++ L+ +V+ + + + V L+E E+
Sbjct: 64 YMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALN--SHLLEAKVTIDKLSEDNELYR 121
Query: 131 Q----IIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 162
+ Q ++++GRV+ V + SD + +L+
Sbjct: 122 KDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLH 157
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 28.5 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 35 DTSSEVLDELYRVTREYTQNKKEAEKIIKN---LIKT 68
D+ E D+L T + TQ K+EA++I KN +IKT
Sbjct: 404 DSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKT 440
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 28.1 bits (61), Expect = 4.7
Identities = 25/121 (20%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 8 SKNLAVQAQKKILGKMVSKSIATTL--IDDTSSEVLDELYRVTREYTQNKKEAEKIIKNL 65
+++L +Q + K +M+SK T+ + + SE ++ + ++ ++K E +K I+ L
Sbjct: 1917 ARDLEIQQELKT-ARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQEL 1975
Query: 66 IKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNEC 125
K ++L + + + ++ ME+ KK+ +++ S ++ + L L E
Sbjct: 1976 QKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQNLSMQSVRMDNFQLTKK-LHESLEEI 2034
Query: 126 R 126
R
Sbjct: 2035 R 2035
>gi|194239705 dedicator of cytokinesis 9 isoform b [Homo sapiens]
Length = 2068
Score = 27.7 bits (60), Expect = 6.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 110 DYTFDRNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYN 163
D F+ +VL LL +C + L + + L A + + +++ D E LA LY+
Sbjct: 1705 DVHFNEDVLMELLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYD 1758
>gi|24308029 dedicator of cytokinesis 9 isoform a [Homo sapiens]
Length = 2069
Score = 27.7 bits (60), Expect = 6.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 110 DYTFDRNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYN 163
D F+ +VL LL +C + L + + L A + + +++ D E LA LY+
Sbjct: 1706 DVHFNEDVLMELLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYD 1759
>gi|47132534 STAM binding protein [Homo sapiens]
Length = 424
Score = 27.7 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 9 KNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYT----QNKKEAEKIIKN 64
K+ + +K + K+ K IA ++ +E+L R T+EYT + KKEAE++ +N
Sbjct: 81 KSAVIPEKKDTVKKL--KEIAFPKAEELKAELLK---RYTKEYTEYNEEKKKEAEELARN 135
Query: 65 L 65
+
Sbjct: 136 M 136
>gi|42519912 STAM binding protein [Homo sapiens]
Length = 424
Score = 27.7 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 9 KNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYT----QNKKEAEKIIKN 64
K+ + +K + K+ K IA ++ +E+L R T+EYT + KKEAE++ +N
Sbjct: 81 KSAVIPEKKDTVKKL--KEIAFPKAEELKAELLK---RYTKEYTEYNEEKKKEAEELARN 135
Query: 65 L 65
+
Sbjct: 136 M 136
>gi|5453545 STAM binding protein [Homo sapiens]
Length = 424
Score = 27.7 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 9 KNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYT----QNKKEAEKIIKN 64
K+ + +K + K+ K IA ++ +E+L R T+EYT + KKEAE++ +N
Sbjct: 81 KSAVIPEKKDTVKKL--KEIAFPKAEELKAELLK---RYTKEYTEYNEEKKKEAEELARN 135
Query: 65 L 65
+
Sbjct: 136 M 136
>gi|105990532 apolipoprotein B precursor [Homo sapiens]
Length = 4563
Score = 27.3 bits (59), Expect = 7.9
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 32 LIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAI------LYRNNQFNQDE 85
LI+D ++ + + Y Q+ E I + I V KL L++ N+F Q+E
Sbjct: 4309 LIEDNIKQLKEMKFTYLINYIQD--EINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNE 4366
Query: 86 LALMEKFKKKVHQLAM---------TVVSFHQVDYTFDRNVLS---RLLNECREMLHQII 133
L + +++HQ M ++V + Y + ++S LL ++ + I
Sbjct: 4367 LQEASQELQQIHQYIMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYI 4426
Query: 134 --QRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGINKMLDEENI 188
+ T++ +V F H + E+L+ L +P G K + +L +++ + I
Sbjct: 4427 VSASNFTSQLSSQVEQ-FLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQAI 4482
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 27.3 bits (59), Expect = 7.9
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 12 AVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIK 71
+++++ +L + +S+ +V E+ ++ E +Q K+E E I L +
Sbjct: 798 SLESEVSVLASKLKESVKE------KEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQE 851
Query: 72 LAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLHQ 131
+ L + Q Q+ELA M+++ + +L + D N +S+ + + +E L+
Sbjct: 852 VNELLQKFQQAQEELAEMKRYAESSSKL--------EEDKDKKINEMSKEVTKLKEALNS 903
Query: 132 IIQRHLTAKSHGR 144
+ Q + S R
Sbjct: 904 LSQLSYSTSSSKR 916
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 27.3 bits (59), Expect = 7.9
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 12 AVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIK 71
+++++ +L + +S+ +V E+ ++ E +Q K+E E I L +
Sbjct: 787 SLESEVSVLASKLKESVKE------KEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQE 840
Query: 72 LAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLHQ 131
+ L + Q Q+ELA M+++ + +L + D N +S+ + + +E L+
Sbjct: 841 VNELLQKFQQAQEELAEMKRYAESSSKL--------EEDKDKKINEMSKEVTKLKEALNS 892
Query: 132 IIQRHLTAKSHGR 144
+ Q + S R
Sbjct: 893 LSQLSYSTSSSKR 905
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 27.3 bits (59), Expect = 7.9
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 12 AVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIK 71
+++++ +L + +S+ +V E+ ++ E +Q K+E E I L +
Sbjct: 766 SLESEVSVLASKLKESVKE------KEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQE 819
Query: 72 LAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLHQ 131
+ L + Q Q+ELA M+++ + +L + D N +S+ + + +E L+
Sbjct: 820 VNELLQKFQQAQEELAEMKRYAESSSKL--------EEDKDKKINEMSKEVTKLKEALNS 871
Query: 132 IIQRHLTAKSHGR 144
+ Q + S R
Sbjct: 872 LSQLSYSTSSSKR 884
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 27.3 bits (59), Expect = 7.9
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 12 AVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIK 71
+++++ +L + +S+ +V E+ ++ E +Q K+E E I L +
Sbjct: 795 SLESEVSVLASKLKESVKE------KEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQE 848
Query: 72 LAILYRNNQFNQDELALMEKFKKKVHQLAMTVVSFHQVDYTFDRNVLSRLLNECREMLHQ 131
+ L + Q Q+ELA M+++ + +L + D N +S+ + + +E L+
Sbjct: 849 VNELLQKFQQAQEELAEMKRYAESSSKL--------EEDKDKKINEMSKEVTKLKEALNS 900
Query: 132 IIQRHLTAKSHGR 144
+ Q + S R
Sbjct: 901 LSQLSYSTSSSKR 913
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,810,352
Number of Sequences: 37866
Number of extensions: 219470
Number of successful extensions: 818
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 792
Number of HSP's gapped (non-prelim): 48
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.