FAM55D 2027

Name: FAM55D	Sequence: fasta or formatted (544aa)		NCBI GI: 117647230
Description: hypothetical protein LOC54827 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {260aa} hypothetical protein LOC54827 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 24 2 C cysteine 2.0 11 1 D aspartate 4.0 22 1 E glutamate 4.6 25 1 F phenylalanine 4.0 22 1 G glycine 5.0 27 2 H histidine 3.3 18 1 I isoleucine 8.3 45 2 K lysine 6.1 33 2 L leucine 10.1 55 3 M methionine 2.9 16 1 N asparagine 5.9 32 2 P proline 3.5 19 2 Q glutamine 4.4 24 2 R arginine 4.8 26 2 S serine 8.3 45 2 T threonine 6.8 37 3 V valine 5.9 32 2 W tryptophan 1.8 10 1 Y tyrosine 3.9 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC54827 isoform 1 FAM55B 0.610 hypothetical protein LOC120406 FAM55A 0.481 hypothetical protein LOC120400 FAM55D 0.472 hypothetical protein LOC54827 isoform 2 FAM55C 0.227 hypothetical protein LOC91775 FAM55C 0.227 hypothetical protein LOC91775 TRIM2 0.013 tripartite motif-containing 2 isoform 2 TRIM2 0.013 tripartite motif-containing 2 isoform 1 TRIM71 0.010 tripartite motif-containing 71 NXPH3 0.009 neurexophilin 3 C7orf58 0.009 hypothetical protein LOC79974 isoform 1 TRIM3 0.009 tripartite motif-containing 3 TRIM3 0.009 tripartite motif-containing 3 NXPH1 0.007 neurexophilin 1 precursor FLNB 0.006 filamin B, beta (actin binding protein 278) CASD1 0.006 CAS1 domain containing 1 NXPH2 0.005 neurexophilin 2 VPS8 0.004 vacuolar protein sorting 8 homolog isoform b VPS8 0.004 vacuolar protein sorting 8 homolog isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.