FAM55B 12559

Name: FAM55B	Sequence: fasta or formatted (559aa)		NCBI GI: 210147446
Description: hypothetical protein LOC120406		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 27 1 C cysteine 2.3 13 1 D aspartate 4.7 26 2 E glutamate 5.2 29 2 F phenylalanine 5.7 32 1 G glycine 4.5 25 2 H histidine 3.9 22 2 I isoleucine 9.8 55 2 K lysine 6.4 36 2 L leucine 9.5 53 3 M methionine 2.9 16 2 N asparagine 6.3 35 2 P proline 3.9 22 2 Q glutamine 4.1 23 2 R arginine 5.2 29 2 S serine 4.5 25 2 T threonine 7.3 41 3 V valine 4.1 23 1 W tryptophan 1.4 8 1 Y tyrosine 3.4 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC120406 FAM55D 0.585 hypothetical protein LOC54827 isoform 1 FAM55A 0.520 hypothetical protein LOC120400 FAM55C 0.243 hypothetical protein LOC91775 FAM55C 0.243 hypothetical protein LOC91775 FAM55D 0.233 hypothetical protein LOC54827 isoform 2 TRIM2 0.010 tripartite motif-containing 2 isoform 2 TRIM2 0.010 tripartite motif-containing 2 isoform 1 NXPH3 0.009 neurexophilin 3 MASTL 0.005 microtubule associated serine/threonine kinase-like... TRIM71 0.005 tripartite motif-containing 71 TRIM3 0.005 tripartite motif-containing 3 TRIM3 0.005 tripartite motif-containing 3 NXPH1 0.005 neurexophilin 1 precursor POLQ 0.004 DNA polymerase theta DST 0.004 dystonin isoform 4 DST 0.004 dystonin isoform 3 DST 0.004 dystonin isoform 2 DST 0.004 dystonin isoform 1 DST 0.004 dystonin isoform 1eA precursor CRTAP 0.004 cartilage associated protein precursor NXPH2 0.004 neurexophilin 2 LOC100132941 0.004 PREDICTED: similar to Ig heavy chain Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.