Guide to the Human Genome
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Search of human proteins with 10835165

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|10835165 CD59 antigen preproprotein [Homo sapiens]
         (128 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|187829185 CD59 antigen preproprotein [Homo sapiens]                278   1e-75
gi|187829183 CD59 antigen preproprotein [Homo sapiens]                278   1e-75
gi|10835165 CD59 antigen preproprotein [Homo sapiens]                 278   1e-75
gi|42716299 CD59 antigen preproprotein [Homo sapiens]                 278   1e-75
gi|187829070 CD59 antigen preproprotein [Homo sapiens]                278   1e-75
gi|42761474 CD59 antigen preproprotein [Homo sapiens]                 278   1e-75
gi|42716302 CD59 antigen preproprotein [Homo sapiens]                 278   1e-75
gi|187828910 CD59 antigen preproprotein [Homo sapiens]                278   1e-75
gi|9966907 ARS component B precursor [Homo sapiens]                    41   2e-04
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    39   0.001
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    39   0.001
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]    39   0.001
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]               37   0.003
gi|30794264 glycosylphosphatidylinositol anchored high density l...    37   0.004
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s...    33   0.061
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s...    33   0.061
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ...    33   0.061
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]       32   0.14 
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]     31   0.23 
gi|13376874 lymphocyte antigen 6 complex G6C [Homo sapiens]            31   0.30 
gi|222136622 prostate and testis expressed 3 [Homo sapiens]            30   0.51 
gi|51243049 lymphocyte antigen 6 complex G6D [Homo sapiens]            28   1.5  
gi|4758326 coagulation factor II (thrombin) receptor-like 2 prec...    28   1.5  
gi|33356128 NMDA receptor regulated 1-like protein isoform 1 [Ho...    28   1.5  
gi|61563742 hect domain and RLD 6 [Homo sapiens]                       28   2.0  
gi|157674354 WD repeat domain 72 [Homo sapiens]                        28   2.0  
gi|7019381 fibronectin leucine rich transmembrane protein 2 [Hom...    28   2.6  
gi|7706093 toll-like receptor 7 [Homo sapiens]                         27   3.3  
gi|75677574 cell cycle progression 1 isoform 2 [Homo sapiens]          27   3.3  
gi|75677585 cell cycle progression 1 isoform 1 [Homo sapiens]          27   3.3  

>gi|187829185 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|187829183 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|10835165 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|42716299 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|187829070 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|42761474 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|42716302 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|187828910 CD59 antigen preproprotein [Homo sapiens]
          Length = 128

 Score =  278 bits (710), Expect = 1e-75
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60
           MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV
Sbjct: 1   MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQV 60

Query: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120
           YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL
Sbjct: 61  YNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFL 120

Query: 121 AAAWSLHP 128
           AAAWSLHP
Sbjct: 121 AAAWSLHP 128


>gi|9966907 ARS component B precursor [Homo sapiens]
          Length = 103

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)

Query: 12  LLLVLAVFCHSGHSLQCYNCPNP--TADCKTAVNCSSDFDACLITKAGLQV---YNKC-W 65
           LLLV A     G +L+CY C  P  +A C+T   C  +  AC+ T   ++    +N+   
Sbjct: 9   LLLVAAWSMGCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPV 68

Query: 66  KFEHCNFNDVTTRLRENELTY--YCCKKDLCN 95
               C+ + V T        +  +CC +DLCN
Sbjct: 69  VTRSCSSSCVATDPDSIGAAHLIFCCFRDLCN 100


>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
          Length = 116

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 9   LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
           L  L+LV+ +      +L C+ C     +C   + C +    C+ T+       ++V   
Sbjct: 4   LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63

Query: 64  CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
           C     C F  V     ++  T  CC+ DLCN        GT L+    L L    LA  
Sbjct: 64  C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112

Query: 124 WSL 126
           W L
Sbjct: 113 WGL 115


>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
          Length = 116

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 9   LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
           L  L+LV+ +      +L C+ C     +C   + C +    C+ T+       ++V   
Sbjct: 4   LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63

Query: 64  CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
           C     C F  V     ++  T  CC+ DLCN        GT L+    L L    LA  
Sbjct: 64  C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112

Query: 124 WSL 126
           W L
Sbjct: 113 WGL 115


>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
          Length = 116

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 9   LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
           L  L+LV+ +      +L C+ C     +C   + C +    C+ T+       ++V   
Sbjct: 4   LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63

Query: 64  CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
           C     C F  V     ++  T  CC+ DLCN        GT L+    L L    LA  
Sbjct: 64  C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112

Query: 124 WSL 126
           W L
Sbjct: 113 WGL 115


>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
          Length = 125

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)

Query: 6   GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
           G+ L  L LVLA       +L+CY CP PT  +DC T   C+++   C  T         
Sbjct: 3   GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62

Query: 55  -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
            +    V   C     C  +DV        L   CC  +LCN
Sbjct: 63  FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100


>gi|30794264 glycosylphosphatidylinositol anchored high density
           lipoprotein binding protein 1 [Homo sapiens]
          Length = 184

 Score = 37.0 bits (84), Expect = 0.004
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 26  LQCYNCPNPTAD--CKTAVNCSSDFDACLI-----TKAGLQVYNKCWKFEHCNFNDVTTR 78
           L+CY C +   D  C    NCS       +     T++GL   +  W  + C    +T  
Sbjct: 63  LRCYTCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQ--PITKT 120

Query: 79  LRENELTYYCCKKDLCN 95
           +   ++T  CC+  LCN
Sbjct: 121 VEGTQVTMTCCQSSLCN 137


>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
          sapiens]
          Length = 190

 Score = 33.1 bits (74), Expect = 0.061
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 8  VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
          +L  LLL+ AV      +L C+ C      C++ V C+     C+IT+A    G+ V   
Sbjct: 3  LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61

Query: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
          C     C  + V++  R   L+  CC+   CN
Sbjct: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89


>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
          sapiens]
          Length = 190

 Score = 33.1 bits (74), Expect = 0.061
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 8  VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
          +L  LLL+ AV      +L C+ C      C++ V C+     C+IT+A    G+ V   
Sbjct: 3  LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61

Query: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
          C     C  + V++  R   L+  CC+   CN
Sbjct: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89


>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
          sapiens]
          Length = 190

 Score = 33.1 bits (74), Expect = 0.061
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 8  VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
          +L  LLL+ AV      +L C+ C      C++ V C+     C+IT+A    G+ V   
Sbjct: 3  LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61

Query: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
          C     C  + V++  R   L+  CC+   CN
Sbjct: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89


>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
          Length = 128

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 12  LLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNKCWK 66
           LL  LAV      +L+C+ C + +++CK +V C +    C  T       G  V   C  
Sbjct: 7   LLAALAVATGPALTLRCHVCTS-SSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC-- 63

Query: 67  FEHCNFN-DVTTRLRENELTYYCCKKDLCNFNEQLEN 102
            E C  +  +  ++     +  CC++DLC  NE+L N
Sbjct: 64  AESCTPSYTLQGQVSSGTSSTQCCQEDLC--NEKLHN 98


>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
          Length = 123

 Score = 31.2 bits (69), Expect = 0.23
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 13  LLVLAVFCHSGHSLQCYNCPNPTA--DCKTAVNCSSDFDACLITKAG----LQVYNKCWK 66
           LL+  +    G +L CY+C    +  DC    NC+   + C   +      L V +K   
Sbjct: 8   LLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLTVISK--- 64

Query: 67  FEHCNFNDVTTRLRENELTYY-------CCKKDLCNFNEQLENGGTSLSEKTVLLLVTPF 119
              C+ N V     ++   YY       CC  DLCN      +G  +L     +L + P 
Sbjct: 65  --GCSLNCV-----DDSQDYYVGKKNITCCDTDLCN-----ASGAHALQPAAAILALLPA 112

Query: 120 L 120
           L
Sbjct: 113 L 113


>gi|13376874 lymphocyte antigen 6 complex G6C [Homo sapiens]
          Length = 125

 Score = 30.8 bits (68), Expect = 0.30
 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 21/99 (21%)

Query: 12 LLLVLAVFCHSGHSLQCYNCPN-PTADCKTAVNCSSD-FDACLITKAGLQVYNKCWKF-- 67
          LL +  + C     ++C++C   P   C    +C  +    CL T A L    K W F  
Sbjct: 6  LLTLSVLLCWVSADIRCHSCYKVPVLGCVDRQSCRLEPGQQCLTTHAYL---GKMWVFSN 62

Query: 68 -------EHCN--FNDVTTRLRENELTYY--CCKKDLCN 95
                 E C   FN    +L    LTY   CC KD CN
Sbjct: 63 LRCGTPEEPCQEAFNQTNRKLG---LTYNTTCCNKDNCN 98


>gi|222136622 prostate and testis expressed 3 [Homo sapiens]
          Length = 98

 Score = 30.0 bits (66), Expect = 0.51
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 13/81 (16%)

Query: 25 SLQCYNCP--NPTADCKTA--VNCSSDFDACLITKA----GLQV-YNKCWKFEHCNFNDV 75
          SLQC  C     T  C+    V  +   +AC++ +      LQ+ Y  C KF      D+
Sbjct: 20 SLQCITCHLRTRTDRCRRGFGVCTAQKGEACMLLRIYQRNTLQISYMVCQKF----CRDM 75

Query: 76 TTRLRENELTYYCCKKDLCNF 96
          T  LR     + CC  + CNF
Sbjct: 76 TFDLRNRTYVHTCCNYNYCNF 96


>gi|51243049 lymphocyte antigen 6 complex G6D [Homo sapiens]
          Length = 133

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 11 GLLLVLAVFCHSGHSLQCYNC-PNPTADCKTAV 42
          G+LL   +    G+ ++CYNC  +P++ CK AV
Sbjct: 7  GILLSSLLGAALGNRMRCYNCGGSPSSSCKEAV 39


>gi|4758326 coagulation factor II (thrombin) receptor-like 2
          precursor [Homo sapiens]
          Length = 374

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 11 GLLLVLAVFCHSGHSLQCYNCPNPTADCKT 40
          GLLL+L  FC SG      N   PT   KT
Sbjct: 10 GLLLLLPTFCQSGMENDTNNLAKPTLPIKT 39


>gi|33356128 NMDA receptor regulated 1-like protein isoform 1 [Homo
           sapiens]
          Length = 864

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 69  HCNFNDVTTRLRENELTYYCCKKDLCNFNEQ-LENGGTSL 107
           H N  D+ +++   E+     KKDL +FNE  L+   TSL
Sbjct: 722 HSNLPDIVSKVLSQEMQKIFVKKDLESFNEDFLKRNATSL 761


>gi|61563742 hect domain and RLD 6 [Homo sapiens]
          Length = 1022

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 9/62 (14%)

Query: 14  LVLAVFCHSGHS------LQCYNCPNPTADCKTAVNCSSDFD--ACLITKAGLQVYNKCW 65
           L+ A+ CHS H       L    CP    D K   N    F    C ++K  LQV  KCW
Sbjct: 465 LLRALPCHSPHQEALSVFLLLPECP-VMHDSKNWKNLVVPFAKAVCEMSKQSLQVLKKCW 523

Query: 66  KF 67
            F
Sbjct: 524 AF 525


>gi|157674354 WD repeat domain 72 [Homo sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 41  AVNCSSDFDACLITKAGLQVYNKCWK-FEHCNFNDVTTRLREN 82
           ++NC +        +  L V++KCWK +++C+F+ + T +  N
Sbjct: 212 SLNCQTIRFCTYTERLLLVVFSKCWKVYDYCDFSLLLTEVSRN 254


>gi|7019381 fibronectin leucine rich transmembrane protein 2 [Homo
           sapiens]
          Length = 660

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 11/23 (47%), Positives = 18/23 (78%)

Query: 2   GIQGGSVLFGLLLVLAVFCHSGH 24
           G+ GG+V+F L+++L+VFC   H
Sbjct: 545 GLIGGAVIFVLVVLLSVFCWHMH 567


>gi|7706093 toll-like receptor 7 [Homo sapiens]
          Length = 1049

 Score = 27.3 bits (59), Expect = 3.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 10  FGLLLVLAVFCHSGHSLQCYNCPNPTADCK 39
           F  L  L +   SG+  +CYN P P A CK
Sbjct: 245 FNNLNQLQILDLSGNCPRCYNAPFPCAPCK 274


>gi|75677574 cell cycle progression 1 isoform 2 [Homo sapiens]
          Length = 757

 Score = 27.3 bits (59), Expect = 3.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 18 VFCHSGHSLQCYNCPNPTADCKTAVNCSS 46
          V  H G  ++  N   PT  C+ A  CSS
Sbjct: 16 VISHEGSDIEMLNSVTPTDSCEPAPECSS 44


>gi|75677585 cell cycle progression 1 isoform 1 [Homo sapiens]
          Length = 757

 Score = 27.3 bits (59), Expect = 3.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 18 VFCHSGHSLQCYNCPNPTADCKTAVNCSS 46
          V  H G  ++  N   PT  C+ A  CSS
Sbjct: 16 VISHEGSDIEMLNSVTPTDSCEPAPECSS 44


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.137    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,142,569
Number of Sequences: 37866
Number of extensions: 209609
Number of successful extensions: 697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 40
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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