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Search of human proteins with 10835083
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10835083 X-linked juvenile retinoschisis protein precursor
[Homo sapiens]
(224 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10835083 X-linked juvenile retinoschisis protein precursor [H... 478 e-135
gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Ho... 116 2e-26
gi|105990535 coagulation factor V precursor [Homo sapiens] 110 1e-24
gi|31317224 EGF-like repeats and discoidin I-like domains-contai... 105 2e-23
gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo sa... 102 3e-22
gi|10518506 coagulation factor VIII isoform b precursor [Homo sa... 96 2e-20
gi|4503647 coagulation factor VIII isoform a precursor [Homo sap... 96 2e-20
gi|41872572 neuropilin 2 isoform 3 precursor [Homo sapiens] 91 1e-18
gi|41872567 neuropilin 2 isoform 5 precursor [Homo sapiens] 91 1e-18
gi|41872562 neuropilin 2 isoform 1 precursor [Homo sapiens] 91 1e-18
gi|41872557 neuropilin 2 isoform 6 precursor [Homo sapiens] 91 1e-18
gi|41872544 neuropilin 2 isoform 4 precursor [Homo sapiens] 91 1e-18
gi|41872533 neuropilin 2 isoform 2 precursor [Homo sapiens] 91 1e-18
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 87 9e-18
gi|9994201 carboxypeptidase X, member 1 precursor [Homo sapiens] 87 9e-18
gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo sap... 86 3e-17
gi|66864913 neuropilin 1 isoform c [Homo sapiens] 81 8e-16
gi|66912178 neuropilin 1 isoform b [Homo sapiens] 81 8e-16
gi|182508169 neuropilin 1 isoform a [Homo sapiens] 81 8e-16
gi|27735143 discoidin, CUB and LCCL domain containing 1 [Homo sa... 81 8e-16
gi|167830477 milk fat globule-EGF factor 8 protein isoform b [Ho... 80 2e-15
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 80 2e-15
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 73 2e-13
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 73 2e-13
gi|239743729 PREDICTED: similar to contactin associated protein-... 73 2e-13
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 73 2e-13
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 73 2e-13
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 73 2e-13
gi|62420886 discoidin domain receptor family, member 2 precursor... 72 5e-13
gi|62420884 discoidin domain receptor family, member 2 precursor... 72 5e-13
>gi|10835083 X-linked juvenile retinoschisis protein precursor [Homo
sapiens]
Length = 224
Score = 478 bits (1231), Expect = e-135
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MSRKIEGFLLLLLFGYEATLGLSSTEDEGEDPWYQKACKCDCQGGPNALWSAGATSLDCI 60
MSRKIEGFLLLLLFGYEATLGLSSTEDEGEDPWYQKACKCDCQGGPNALWSAGATSLDCI
Sbjct: 1 MSRKIEGFLLLLLFGYEATLGLSSTEDEGEDPWYQKACKCDCQGGPNALWSAGATSLDCI 60
Query: 61 PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS 120
PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS
Sbjct: 61 PECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSS 120
Query: 121 QWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNS 180
QWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNS
Sbjct: 121 QWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNS 180
Query: 181 DRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLECVSKCA 224
DRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLECVSKCA
Sbjct: 181 DRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLECVSKCA 224
>gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Homo
sapiens]
Length = 387
Score = 116 bits (290), Expect = 2e-26
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 5/156 (3%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYS-SWTANKARLNSQGFGCAWLSKFQDSSQWLQID 126
PLG ++ + QIT S+ + G + SW + ARL+ QG AW++ + QWLQ+D
Sbjct: 233 PLGLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQVD 292
Query: 127 LKEIKVISGILTQGRCDID--EWMTKYSVQYRTDERLNWIYYKD-QTGNNRVFYGNSDRT 183
L K ++GI+TQG + +++ Y V Y D NW Y+D +TG++++F GN D
Sbjct: 293 LGSSKEVTGIITQGARNFGSVQFVASYKVAYSNDSA-NWTEYQDPRTGSSKIFPGNWDNH 351
Query: 184 STVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
S +NL PI++R++R++P+ WH RIA+R+ELL C
Sbjct: 352 SHKKNLFETPILARYVRILPVAWHNRIALRLELLGC 387
Score = 79.7 bits (195), Expect = 2e-15
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 67 KPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQID 126
+PLG E+G + QI S+ W ARLN G AW D + W+Q++
Sbjct: 72 EPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQVN 131
Query: 127 LKEIKVISGILTQG--RCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTS 184
L ++G++TQG R E++ + V Y + + + D ++ F GN ++ +
Sbjct: 132 LLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGH-EFDFIHDVNKKHKEFVGNWNKNA 190
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC-VSKCA 224
NL P+ ++++RL P H +R ELL C ++ CA
Sbjct: 191 VHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCA 231
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 110 bits (274), Expect = 1e-24
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDL 127
PLG E+G++ QIT S+ ++ W W +ARLN+QG AW +K ++ QWL+IDL
Sbjct: 2069 PLGMENGKIENKQITASSFKKS-WWGDYWEPFRARLNAQGRVNAWQAKANNNKQWLEIDL 2127
Query: 128 KEIKVISGILTQGRCDIDE--WMTKYSVQYRTDERLNWIYYKDQTGN-NRVFYGNSDRTS 184
+IK I+ I+TQG + ++ Y++ Y +++ + W Y+ ++ +++F GN++
Sbjct: 2128 LKIKKITAIITQGCKSLSSEMYVKSYTIHY-SEQGVEWKPYRLKSSMVDKIFEGNTNTKG 2186
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
V+N PPIISRFIR+IP W+ IA+R+EL C
Sbjct: 2187 HVKNFFNPPIISRFIRVIPKTWNQSIALRLELFGC 2221
Score = 80.1 bits (196), Expect = 1e-15
Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 15/165 (9%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAW----LSKFQDSSQWL 123
P+G +G ++ QI S +++G+ W ARLN+ G AW L+ S W+
Sbjct: 1910 PMGLSTGIISDSQIKAS---EFLGY---WEPRLARLNNGGSYNAWSVEKLAAEFASKPWI 1963
Query: 124 QIDLKEIKVISGILTQGRCDIDE--WMTKYSVQYRTDERLNWIYYK-DQTGNNRVFYGNS 180
Q+D+++ +I+GI TQG + + T++ V Y +++ +NW +K + T N F GNS
Sbjct: 1964 QVDMQKEVIITGIQTQGAKHYLKSCYTTEFYVAYSSNQ-INWQIFKGNSTRNVMYFNGNS 2022
Query: 181 DRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC-VSKCA 224
D ++ +N PPI++R+IR+ P + R +R+EL C V+ C+
Sbjct: 2023 DASTIKENQFDPPIVARYIRISPTRAYNRPTLRLELQGCEVNGCS 2067
>gi|31317224 EGF-like repeats and discoidin I-like
domains-containing protein 3 [Homo sapiens]
Length = 480
Score = 105 bits (263), Expect = 2e-23
Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 67 KPLGFESGEVTPDQITCSNPEQYVGW-YSSWTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
+PLG +SG + QIT S+ + + +W KARL+ QG AW S D SQWLQ+
Sbjct: 321 EPLGMKSGHIQDYQITASSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQV 380
Query: 126 DLKEIKVISGILTQGRCDID--EWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRT 183
DL ++GI+TQG D +++ Y + Y D +Y ++ ++VF GN D
Sbjct: 381 DLLVPTKVTGIITQGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDEKQRKDKVFQGNFDND 440
Query: 184 STVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLECVSK 222
+ +N++ PPI +R IR++P W+ RI +R ELL C +
Sbjct: 441 THRKNVIDPPIYARHIRILPWSWYGRITLRSELLGCTEE 479
Score = 91.7 bits (226), Expect = 5e-19
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDL 127
PLG E G ++ QIT S+ + + W ARLN +G AW + D W+QI+L
Sbjct: 161 PLGIEGGIISNQQITASSTHRALFGLQKWYPYYARLNKKGLINAWTAAENDRWPWIQINL 220
Query: 128 KEIKVISGILTQG--RCDIDEWMTKYSVQYRTDERLNWIYYKDQ-TGNNRVFYGNSDRTS 184
+ ++G++TQG R E++ Y + Y D + W YK + T + VF GN D +
Sbjct: 221 QRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGK-TWAMYKVKGTNEDMVFRGNIDNNT 279
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC-VSKCA 224
N PPI ++++RL P +RMELL C +S C+
Sbjct: 280 PYANSFTPPIKAQYVRLYPQVCRRHCTLRMELLGCELSGCS 320
>gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo
sapiens]
Length = 775
Score = 102 bits (253), Expect = 3e-22
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 7/171 (4%)
Query: 54 ATSLDCIPECPYHKPLGFESGEVTPDQITCSNPEQYV---GWYSSWTANKARLNSQGFGC 110
+TSL + LG ESG + QIT S+ ++ G +SW KARL G
Sbjct: 281 STSLFTFKTSGCYGTLGMESGVIADPQITASSVLEWTDHTGQENSWKPKKARLKKPG--P 338
Query: 111 AWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDE--WMTKYSVQYRTDERLNWIYYKD 168
W + D QWLQIDL + K I+GI+T G ++ +++ Y + Y D + +Y +
Sbjct: 339 PWAAFATDEYQWLQIDLNKEKKITGIITTGSTMVEHNYYVSAYRILYSDDGQKWTVYREP 398
Query: 169 QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
+++F GN D V+N PPII+RFIR+ P W +IA++MELL C
Sbjct: 399 GVEQDKIFQGNKDYHQDVRNNFLPPIIARFIRVNPTQWQQKIAMKMELLGC 449
>gi|10518506 coagulation factor VIII isoform b precursor [Homo
sapiens]
Length = 216
Score = 95.9 bits (237), Expect = 2e-20
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDL 127
PLG ES ++ QIT S+ + +++W+ +KARL+ QG AW + + +WLQ+D
Sbjct: 61 PLGMESKAISDAQITASS--YFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDF 118
Query: 128 KEIKVISGILTQGRCDI--DEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTST 185
++ ++G+ TQG + ++ ++ + D +++ Q G +VF GN D +
Sbjct: 119 QKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF--QNGKVKVFQGNQDSFTP 176
Query: 186 VQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
V N L PP+++R++R+ P W +IA+RME+L C
Sbjct: 177 VVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGC 210
Score = 50.1 bits (118), Expect = 2e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 174 RVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
+VF+GN D + N+ PPII+R+IRL P + +R +RMEL+ C
Sbjct: 8 KVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGC 53
>gi|4503647 coagulation factor VIII isoform a precursor [Homo sapiens]
Length = 2351
Score = 95.9 bits (237), Expect = 2e-20
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDL 127
PLG ES ++ QIT S+ + +++W+ +KARL+ QG AW + + +WLQ+D
Sbjct: 2196 PLGMESKAISDAQITASS--YFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDF 2253
Query: 128 KEIKVISGILTQGRCDI--DEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTST 185
++ ++G+ TQG + ++ ++ + D +++ Q G +VF GN D +
Sbjct: 2254 QKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFF--QNGKVKVFQGNQDSFTP 2311
Query: 186 VQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
V N L PP+++R++R+ P W +IA+RME+L C
Sbjct: 2312 VVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGC 2345
Score = 92.4 bits (228), Expect = 3e-19
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 52 AGATSLDCIPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCA 111
AG ++L + PLG SG + QIT S G Y W ARL+ G A
Sbjct: 2027 AGMSTLFLVYSNKCQTPLGMASGHIRDFQITAS------GQYGQWAPKLARLHYSGSINA 2080
Query: 112 WLSKFQDSSQWLQIDLKEIKVISGILTQGRCD--IDEWMTKYSVQYRTDERLNWIYYKDQ 169
W +K + W+++DL +I GI TQG +++++ + Y D + Y +
Sbjct: 2081 WSTK--EPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYSLDGKKWQTYRGNS 2138
Query: 170 TGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
TG VF+GN D + N+ PPII+R+IRL P + +R +RMEL+ C
Sbjct: 2139 TGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGC 2188
>gi|41872572 neuropilin 2 isoform 3 precursor [Homo sapiens]
Length = 909
Score = 90.5 bits (223), Expect = 1e-18
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSS--WTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
PLG ESG + +QI+ S+ YS WT ++RL+ G W + ++LQ+
Sbjct: 280 PLGMESGRIANEQISASST------YSDGRWTPQQSRLHGDDNG--WTPNLDSNKEYLQV 331
Query: 126 DLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRVFYGNSDR 182
DL+ + +++ I TQG + Y Y+ + N W+ Y+ N++VF N+D
Sbjct: 332 DLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGK-NHKVFQANNDA 390
Query: 183 TSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
T V N L P+++RF+R+ P WH IA+R+EL C
Sbjct: 391 TEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGC 427
Score = 61.2 bits (147), Expect = 7e-10
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF--- 116
+ + P LG SG + QI+ S+ ++Y+ W+ + ARL S G W +
Sbjct: 429 VTDAPCSNMLGMLSGLIADSQISASSTQEYL-----WSPSAARLVSSRSG--WFPRIPQA 481
Query: 117 QDSSQWLQIDLKEIKVISGILTQGRCDIDE--------WMTKYSVQYRTDERLNWIYYKD 168
Q +WLQ+DL K + G++ QG D ++ K+ V Y + + +W Y +D
Sbjct: 482 QPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK-DWEYIQD 540
Query: 169 -QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLEC 219
+T ++F GN T PI ++++R+ P W I +R+E+L C
Sbjct: 541 PRTQQPKLFEGNM-HYDTPDIRRFDPIPAQYVRVYPERWSPAGIGMRLEVLGC 592
>gi|41872567 neuropilin 2 isoform 5 precursor [Homo sapiens]
Length = 901
Score = 90.5 bits (223), Expect = 1e-18
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSS--WTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
PLG ESG + +QI+ S+ YS WT ++RL+ G W + ++LQ+
Sbjct: 280 PLGMESGRIANEQISASST------YSDGRWTPQQSRLHGDDNG--WTPNLDSNKEYLQV 331
Query: 126 DLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRVFYGNSDR 182
DL+ + +++ I TQG + Y Y+ + N W+ Y+ N++VF N+D
Sbjct: 332 DLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGK-NHKVFQANNDA 390
Query: 183 TSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
T V N L P+++RF+R+ P WH IA+R+EL C
Sbjct: 391 TEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGC 427
Score = 61.2 bits (147), Expect = 7e-10
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF--- 116
+ + P LG SG + QI+ S+ ++Y+ W+ + ARL S G W +
Sbjct: 429 VTDAPCSNMLGMLSGLIADSQISASSTQEYL-----WSPSAARLVSSRSG--WFPRIPQA 481
Query: 117 QDSSQWLQIDLKEIKVISGILTQGRCDIDE--------WMTKYSVQYRTDERLNWIYYKD 168
Q +WLQ+DL K + G++ QG D ++ K+ V Y + + +W Y +D
Sbjct: 482 QPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK-DWEYIQD 540
Query: 169 -QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLEC 219
+T ++F GN T PI ++++R+ P W I +R+E+L C
Sbjct: 541 PRTQQPKLFEGNM-HYDTPDIRRFDPIPAQYVRVYPERWSPAGIGMRLEVLGC 592
>gi|41872562 neuropilin 2 isoform 1 precursor [Homo sapiens]
Length = 931
Score = 90.5 bits (223), Expect = 1e-18
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSS--WTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
PLG ESG + +QI+ S+ YS WT ++RL+ G W + ++LQ+
Sbjct: 280 PLGMESGRIANEQISASST------YSDGRWTPQQSRLHGDDNG--WTPNLDSNKEYLQV 331
Query: 126 DLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRVFYGNSDR 182
DL+ + +++ I TQG + Y Y+ + N W+ Y+ N++VF N+D
Sbjct: 332 DLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGK-NHKVFQANNDA 390
Query: 183 TSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
T V N L P+++RF+R+ P WH IA+R+EL C
Sbjct: 391 TEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGC 427
Score = 61.2 bits (147), Expect = 7e-10
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF--- 116
+ + P LG SG + QI+ S+ ++Y+ W+ + ARL S G W +
Sbjct: 429 VTDAPCSNMLGMLSGLIADSQISASSTQEYL-----WSPSAARLVSSRSG--WFPRIPQA 481
Query: 117 QDSSQWLQIDLKEIKVISGILTQGRCDIDE--------WMTKYSVQYRTDERLNWIYYKD 168
Q +WLQ+DL K + G++ QG D ++ K+ V Y + + +W Y +D
Sbjct: 482 QPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK-DWEYIQD 540
Query: 169 -QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLEC 219
+T ++F GN T PI ++++R+ P W I +R+E+L C
Sbjct: 541 PRTQQPKLFEGNM-HYDTPDIRRFDPIPAQYVRVYPERWSPAGIGMRLEVLGC 592
>gi|41872557 neuropilin 2 isoform 6 precursor [Homo sapiens]
Length = 555
Score = 90.5 bits (223), Expect = 1e-18
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSS--WTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
PLG ESG + +QI+ S+ YS WT ++RL+ G W + ++LQ+
Sbjct: 280 PLGMESGRIANEQISASST------YSDGRWTPQQSRLHGDDNG--WTPNLDSNKEYLQV 331
Query: 126 DLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRVFYGNSDR 182
DL+ + +++ I TQG + Y Y+ + N W+ Y+ N++VF N+D
Sbjct: 332 DLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGK-NHKVFQANNDA 390
Query: 183 TSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
T V N L P+++RF+R+ P WH IA+R+EL C
Sbjct: 391 TEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGC 427
Score = 48.1 bits (113), Expect = 6e-06
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF--- 116
+ + P LG SG + QI+ S+ ++Y+ W+ + ARL S G W +
Sbjct: 429 VTDAPCSNMLGMLSGLIADSQISASSTQEYL-----WSPSAARLVSSRSG--WFPRIPQA 481
Query: 117 QDSSQWLQIDLKEIKVISGILTQGRCDIDE--------WMTKYSVQYRTDERLNWIYYKD 168
Q +WLQ+DL K + G++ QG D ++ K+ V Y + + +W Y +D
Sbjct: 482 QPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK-DWEYIQD 540
>gi|41872544 neuropilin 2 isoform 4 precursor [Homo sapiens]
Length = 906
Score = 90.5 bits (223), Expect = 1e-18
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSS--WTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
PLG ESG + +QI+ S+ YS WT ++RL+ G W + ++LQ+
Sbjct: 280 PLGMESGRIANEQISASST------YSDGRWTPQQSRLHGDDNG--WTPNLDSNKEYLQV 331
Query: 126 DLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRVFYGNSDR 182
DL+ + +++ I TQG + Y Y+ + N W+ Y+ N++VF N+D
Sbjct: 332 DLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGK-NHKVFQANNDA 390
Query: 183 TSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
T V N L P+++RF+R+ P WH IA+R+EL C
Sbjct: 391 TEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGC 427
Score = 61.2 bits (147), Expect = 7e-10
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF--- 116
+ + P LG SG + QI+ S+ ++Y+ W+ + ARL S G W +
Sbjct: 429 VTDAPCSNMLGMLSGLIADSQISASSTQEYL-----WSPSAARLVSSRSG--WFPRIPQA 481
Query: 117 QDSSQWLQIDLKEIKVISGILTQGRCDIDE--------WMTKYSVQYRTDERLNWIYYKD 168
Q +WLQ+DL K + G++ QG D ++ K+ V Y + + +W Y +D
Sbjct: 482 QPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK-DWEYIQD 540
Query: 169 -QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLEC 219
+T ++F GN T PI ++++R+ P W I +R+E+L C
Sbjct: 541 PRTQQPKLFEGNM-HYDTPDIRRFDPIPAQYVRVYPERWSPAGIGMRLEVLGC 592
>gi|41872533 neuropilin 2 isoform 2 precursor [Homo sapiens]
Length = 926
Score = 90.5 bits (223), Expect = 1e-18
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYSS--WTANKARLNSQGFGCAWLSKFQDSSQWLQI 125
PLG ESG + +QI+ S+ YS WT ++RL+ G W + ++LQ+
Sbjct: 280 PLGMESGRIANEQISASST------YSDGRWTPQQSRLHGDDNG--WTPNLDSNKEYLQV 331
Query: 126 DLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRVFYGNSDR 182
DL+ + +++ I TQG + Y Y+ + N W+ Y+ N++VF N+D
Sbjct: 332 DLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGK-NHKVFQANNDA 390
Query: 183 TSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
T V N L P+++RF+R+ P WH IA+R+EL C
Sbjct: 391 TEVVLNKLHAPLLTRFVRIRPQTWHSGIALRLELFGC 427
Score = 61.2 bits (147), Expect = 7e-10
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF--- 116
+ + P LG SG + QI+ S+ ++Y+ W+ + ARL S G W +
Sbjct: 429 VTDAPCSNMLGMLSGLIADSQISASSTQEYL-----WSPSAARLVSSRSG--WFPRIPQA 481
Query: 117 QDSSQWLQIDLKEIKVISGILTQGRCDIDE--------WMTKYSVQYRTDERLNWIYYKD 168
Q +WLQ+DL K + G++ QG D ++ K+ V Y + + +W Y +D
Sbjct: 482 QPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGK-DWEYIQD 540
Query: 169 -QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLEC 219
+T ++F GN T PI ++++R+ P W I +R+E+L C
Sbjct: 541 PRTQQPKLFEGNM-HYDTPDIRRFDPIPAQYVRVYPERWSPAGIGMRLEVLGC 592
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo
sapiens]
Length = 1331
Score = 87.4 bits (215), Expect = 9e-18
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 25/189 (13%)
Query: 33 WYQKACKCDCQGGPNALWSAGATSLDCIPECPYHKPLGFESGEVTPDQITCSNPEQYVGW 92
W +C C W+A +TS C P + S+ G
Sbjct: 16 WIVSSCLCRA-------WTAPSTSQKCDEPLVSGLP-----------HVAFSSSSSISGS 57
Query: 93 YSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYS 152
YS A++N +G W D QWLQ+D K IS I TQGR +W+T+Y
Sbjct: 58 YSP---GYAKINKRGGAGGWSPSDSDHYQWLQVDFGNRKQISAIATQGRYSSSDWVTQYR 114
Query: 153 VQYRTDERLNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH--VRI 210
+ Y +D NW Y Q GN F GN + V++ L+ PII+R++R++PL W+ RI
Sbjct: 115 MLY-SDTGRNWKPY-HQDGNIWAFPGNINSDGVVRHELQHPIIARYVRIVPLDWNGEGRI 172
Query: 211 AIRMELLEC 219
+R+E+ C
Sbjct: 173 GLRIEVYGC 181
>gi|9994201 carboxypeptidase X, member 1 precursor [Homo sapiens]
Length = 734
Score = 87.4 bits (215), Expect = 9e-18
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 63 CPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQG-------FGCAWLSK 115
CP PLG ES V+ ++ S+ + + ++ RLN Q + AW ++
Sbjct: 115 CP---PLGLESLRVSDSRLEASSSQSF-----GLGPHRGRLNIQSGLEDGDLYDGAWCAE 166
Query: 116 FQDSSQWLQIDLKEIKVISGILTQGRCDI--DEWMTKYSVQYRTDERLNWIYYKDQTGNN 173
QD+ W Q+D SG++TQGR + +W+T Y VQ+ D R W +G +
Sbjct: 167 EQDADPWFQVDAGHPTRFSGVITQGRNSVWRYDWVTSYKVQFSNDSRTWWGSRNHSSGMD 226
Query: 174 RVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIA--IRMELLEC 219
VF NSD + V NLL P ++RFIRL+P W A +R E+L C
Sbjct: 227 AVFPANSDPETPVLNLLPEPQVARFIRLLPQTWLQGGAPCLRAEILAC 274
>gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo
sapiens]
Length = 756
Score = 85.9 bits (211), Expect = 3e-17
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 21/173 (12%)
Query: 58 DCIPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQG-------FGC 110
D CP PLG E+ ++T Q+ S ++Y A++ RLN Q +
Sbjct: 131 DVRESCP---PLGLETLKITDFQLHASTVKRY-----GLGAHRGRLNIQAGINENDFYDG 182
Query: 111 AWLSKFQDSSQWLQIDLKEIKVISGILTQGRCD--IDEWMTKYSVQYRTDERLNWIYYKD 168
AW + D QW+++D + + +G++TQGR + +W+T Y V D W+ K+
Sbjct: 183 AWCAGRNDLQQWIEVDARRLTRFTGVITQGRNSLWLSDWVTSYKVMVSNDSH-TWVTVKN 241
Query: 169 QTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGW--HVRIAIRMELLEC 219
+G + +F GNS++ V N L P+++R+IR+ P W + I +RME+L C
Sbjct: 242 GSG-DMIFEGNSEKEIPVLNELPVPMVARYIRINPQSWFDNGSICMRMEILGC 293
>gi|66864913 neuropilin 1 isoform c [Homo sapiens]
Length = 609
Score = 80.9 bits (198), Expect = 8e-16
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 69 LGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDLK 128
LG ESGE+ DQIT S+ + ++W+A ++RLN G W +W+Q+DL
Sbjct: 279 LGMESGEIHSDQITASSQ-----YSTNWSAERSRLNYPENG--WTPGEDSYREWIQVDLG 331
Query: 129 EIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRV-FYGNSDRTS 184
++ ++ + TQG + Y Y+ D N WI K+ GN V F GN++ T
Sbjct: 332 LLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKE--GNKPVLFQGNTNPTD 389
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
V + P+I+RF+R+ P W I++R E+ C
Sbjct: 390 VVVAVFPKPLITRFVRIKPATWETGISMRFEVYGC 424
Score = 57.0 bits (136), Expect = 1e-08
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWL-SKFQD 118
I + P LG SG ++ QIT SN +W RL + G A +
Sbjct: 426 ITDYPCSGMLGMVSGLISDSQITSSNQGD-----RNWMPENIRLVTSRSGWALPPAPHSY 480
Query: 119 SSQWLQIDLKEIKVISGILTQG--RCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVF 176
++WLQIDL E K++ GI+ QG + +M K+ + Y ++ +W D +
Sbjct: 481 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGY-SNNGSDWKMIMDDSKRKAKS 539
Query: 177 YGNSDRTSTVQNLLRPPIISRFIRLIP-LGWHVRIAIRMELLEC 219
+ ++ T + P + +RFIR+ P H + +RMELL C
Sbjct: 540 FEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGC 583
>gi|66912178 neuropilin 1 isoform b [Homo sapiens]
Length = 644
Score = 80.9 bits (198), Expect = 8e-16
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 69 LGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDLK 128
LG ESGE+ DQIT S+ + ++W+A ++RLN G W +W+Q+DL
Sbjct: 279 LGMESGEIHSDQITASSQ-----YSTNWSAERSRLNYPENG--WTPGEDSYREWIQVDLG 331
Query: 129 EIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRV-FYGNSDRTS 184
++ ++ + TQG + Y Y+ D N WI K+ GN V F GN++ T
Sbjct: 332 LLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKE--GNKPVLFQGNTNPTD 389
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
V + P+I+RF+R+ P W I++R E+ C
Sbjct: 390 VVVAVFPKPLITRFVRIKPATWETGISMRFEVYGC 424
Score = 57.0 bits (136), Expect = 1e-08
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWL-SKFQD 118
I + P LG SG ++ QIT SN +W RL + G A +
Sbjct: 426 ITDYPCSGMLGMVSGLISDSQITSSNQGD-----RNWMPENIRLVTSRSGWALPPAPHSY 480
Query: 119 SSQWLQIDLKEIKVISGILTQG--RCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVF 176
++WLQIDL E K++ GI+ QG + +M K+ + Y ++ +W D +
Sbjct: 481 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGY-SNNGSDWKMIMDDSKRKAKS 539
Query: 177 YGNSDRTSTVQNLLRPPIISRFIRLIP-LGWHVRIAIRMELLEC 219
+ ++ T + P + +RFIR+ P H + +RMELL C
Sbjct: 540 FEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGC 583
>gi|182508169 neuropilin 1 isoform a [Homo sapiens]
Length = 923
Score = 80.9 bits (198), Expect = 8e-16
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 69 LGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQIDLK 128
LG ESGE+ DQIT S+ + ++W+A ++RLN G W +W+Q+DL
Sbjct: 279 LGMESGEIHSDQITASSQ-----YSTNWSAERSRLNYPENG--WTPGEDSYREWIQVDLG 331
Query: 129 EIKVISGILTQGRCDIDEWMTKYSVQYRTDERLN---WIYYKDQTGNNRV-FYGNSDRTS 184
++ ++ + TQG + Y Y+ D N WI K+ GN V F GN++ T
Sbjct: 332 LLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKE--GNKPVLFQGNTNPTD 389
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
V + P+I+RF+R+ P W I++R E+ C
Sbjct: 390 VVVAVFPKPLITRFVRIKPATWETGISMRFEVYGC 424
Score = 57.0 bits (136), Expect = 1e-08
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 60 IPECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWL-SKFQD 118
I + P LG SG ++ QIT SN +W RL + G A +
Sbjct: 426 ITDYPCSGMLGMVSGLISDSQITSSNQGD-----RNWMPENIRLVTSRSGWALPPAPHSY 480
Query: 119 SSQWLQIDLKEIKVISGILTQG--RCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVF 176
++WLQIDL E K++ GI+ QG + +M K+ + Y ++ +W D +
Sbjct: 481 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGY-SNNGSDWKMIMDDSKRKAKS 539
Query: 177 YGNSDRTSTVQNLLRPPIISRFIRLIP-LGWHVRIAIRMELLEC 219
+ ++ T + P + +RFIR+ P H + +RMELL C
Sbjct: 540 FEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGC 583
>gi|27735143 discoidin, CUB and LCCL domain containing 1 [Homo
sapiens]
Length = 539
Score = 80.9 bits (198), Expect = 8e-16
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 78 PD-QITCSNPEQYV---GWYSSWTANKARLNSQGFGCAWLSKFQDSS----QWLQIDLKE 129
PD QI S+ Q V G W+ +ARL QG +W S ++ +WL+IDL E
Sbjct: 263 PDGQIRASSSWQSVNESGDQVHWSPGQARLQDQG--PSWASGDSSNNHKPREWLEIDLGE 320
Query: 130 IKVISGILTQGRCDID-EWMTKYSVQYRTDERLNWIYYKDQTGNN-RVFYGNSDRTSTVQ 187
K I+GI T G + + K V + W YK N +VF GNS+ VQ
Sbjct: 321 KKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDPVQ 380
Query: 188 NLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
N PPI++R++R++P WH RIA+++EL+ C
Sbjct: 381 NNFIPPIVARYVRVVPQTWHQRIALKVELIGC 412
>gi|167830477 milk fat globule-EGF factor 8 protein isoform b [Homo
sapiens]
Length = 335
Score = 79.7 bits (195), Expect = 2e-15
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 67 KPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKFQDSSQWLQID 126
+PLG E+G + QI S+ W ARLN G AW D + W+Q++
Sbjct: 72 EPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQVN 131
Query: 127 LKEIKVISGILTQG--RCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTS 184
L ++G++TQG R E++ + V Y + + + D ++ F GN ++ +
Sbjct: 132 LLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGH-EFDFIHDVNKKHKEFVGNWNKNA 190
Query: 185 TVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC-VSKCA 224
NL P+ ++++RL P H +R ELL C ++ CA
Sbjct: 191 VHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCA 231
Score = 63.5 bits (153), Expect = 1e-10
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 51/153 (33%)
Query: 68 PLGFESGEVTPDQITCSNPEQYVGWYS-SWTANKARLNSQGFGCAWLSKFQDSSQWLQID 126
PLG ++ + QIT S+ + G + SW + ARL+ QG AW++ + QWL
Sbjct: 233 PLGLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWL--- 289
Query: 127 LKEIKVISGILTQGRCDIDEWMTKYSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTSTV 186
++F GN D S
Sbjct: 290 -----------------------------------------------QIFPGNWDNHSHK 302
Query: 187 QNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
+NL PI++R++R++P+ WH RIA+R+ELL C
Sbjct: 303 KNLFETPILARYVRILPVAWHNRIALRLELLGC 335
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 79.7 bits (195), Expect = 2e-15
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 62 ECPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQG-------FGCAWLS 114
+CP P+G ES + +QI S+ ++ A + RLN Q + AW +
Sbjct: 384 KCP---PIGMESHRIEDNQIRASSMLRH-----GLGAQRGRLNMQTGATEDDYYDGAWCA 435
Query: 115 KFQDSSQWLQIDLKEIKVISGILTQGRCDI--DEWMTKYSVQYRTDERLNWIYYKDQTGN 172
+ +QW+++D + +G++TQGR D+++T + V + D + W+ Y +
Sbjct: 436 EDDARTQWIEVDTRRTTRFTGVITQGRDSSIHDDFVTTFFVGFSNDSQ-TWVMYTNGY-E 493
Query: 173 NRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVRIAIRMELLEC 219
F+GN D+ + V + L P+++RFIR+ PL W+ + +R+E+L C
Sbjct: 494 EMTFHGNVDKDTPVLSELPEPVVARFIRIYPLTWNGSLCMRLEVLGC 540
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 73.2 bits (178), Expect = 2e-13
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 101 ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDER 160
+RLN + W + QWLQIDL E ++ + TQG +W+T Y + + +D
Sbjct: 59 SRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMF-SDGG 117
Query: 161 LNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHV--RIAIRMELLE 218
NW Y+ + + F GN++ S V L+PP +RF+R +PL W+ RI +R+E+
Sbjct: 118 RNWKQYRREE-SIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYG 176
Query: 219 CVSK 222
C K
Sbjct: 177 CAYK 180
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 73.2 bits (178), Expect = 2e-13
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 101 ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDER 160
+RLN + W + QWLQIDL E ++ + TQG +W+T Y + + +D
Sbjct: 59 SRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMF-SDGG 117
Query: 161 LNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHV--RIAIRMELLE 218
NW Y+ + + F GN++ S V L+PP +RF+R +PL W+ RI +R+E+
Sbjct: 118 RNWKQYRREE-SIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYG 176
Query: 219 CVSK 222
C K
Sbjct: 177 CAYK 180
>gi|239743729 PREDICTED: similar to contactin associated
protein-like 3B [Homo sapiens]
Length = 380
Score = 73.2 bits (178), Expect = 2e-13
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 101 ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDER 160
+RLN + W + QWLQIDL E ++ + TQG +W+T Y + + +D
Sbjct: 59 SRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMF-SDGG 117
Query: 161 LNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHV--RIAIRMELLE 218
NW Y+ + + F GN++ S V L+PP +RF+R +PL W+ RI +R+E+
Sbjct: 118 RNWKQYRREE-SIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYG 176
Query: 219 CVSK 222
C K
Sbjct: 177 CAYK 180
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 73.2 bits (178), Expect = 2e-13
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 101 ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDER 160
+RLN + W + QWLQIDL E ++ + TQG +W+T Y + + +D
Sbjct: 59 SRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMF-SDGG 117
Query: 161 LNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHV--RIAIRMELLE 218
NW Y+ + + F GN++ S V L+PP +RF+R +PL W+ RI +R+E+
Sbjct: 118 RNWKQYRREE-SIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYG 176
Query: 219 CVSK 222
C K
Sbjct: 177 CAYK 180
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo
sapiens]
Length = 1235
Score = 73.2 bits (178), Expect = 2e-13
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 101 ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDER 160
ARLN + W + QWLQIDL E ++ + TQG W+T Y + + +D
Sbjct: 34 ARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMF-SDSG 92
Query: 161 LNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHV--RIAIRMELLE 218
NW Y+ Q + F GN++ S V L+P I +RF+R IPL W+ RI +R+E+
Sbjct: 93 WNWKQYR-QEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFG 151
Query: 219 C 219
C
Sbjct: 152 C 152
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
Length = 1308
Score = 73.2 bits (178), Expect = 2e-13
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 101 ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTKYSVQYRTDER 160
ARLN + W + QWLQIDL E ++ + TQG W+T Y + + +D
Sbjct: 59 ARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMF-SDSG 117
Query: 161 LNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHV--RIAIRMELLE 218
NW Y+ Q + F GN++ S V L+P I +RF+R IPL W+ RI +R+E+
Sbjct: 118 WNWKQYR-QEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFG 176
Query: 219 C 219
C
Sbjct: 177 C 177
>gi|62420886 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 71.6 bits (174), Expect = 5e-13
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 63 CPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF----QD 118
C Y PLG G++ + IT S+ W S A RL+S+ AW + D
Sbjct: 30 CRY--PLGMSGGQIPDEDITASSQ-----WSESTAAKYGRLDSEEGDGAWCPEIPVEPDD 82
Query: 119 SSQWLQIDLKEIKVISGILTQGRCDID---EWMTKYSVQYRTDERLNWIYYKDQTGNNRV 175
++LQIDL + I+ + TQGR E+ Y + Y D WI ++++ G +V
Sbjct: 83 LKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDGT-RWISWRNRHGK-QV 140
Query: 176 FYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLECV 220
GNS+ L PPI++RF+R IP+ H + + +R+EL CV
Sbjct: 141 LDGNSNPYDIFLKDLEPPIVARFVRFIPVTDHSMNVCMRVELYGCV 186
>gi|62420884 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 71.6 bits (174), Expect = 5e-13
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 63 CPYHKPLGFESGEVTPDQITCSNPEQYVGWYSSWTANKARLNSQGFGCAWLSKF----QD 118
C Y PLG G++ + IT S+ W S A RL+S+ AW + D
Sbjct: 30 CRY--PLGMSGGQIPDEDITASSQ-----WSESTAAKYGRLDSEEGDGAWCPEIPVEPDD 82
Query: 119 SSQWLQIDLKEIKVISGILTQGRCDID---EWMTKYSVQYRTDERLNWIYYKDQTGNNRV 175
++LQIDL + I+ + TQGR E+ Y + Y D WI ++++ G +V
Sbjct: 83 LKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDGT-RWISWRNRHGK-QV 140
Query: 176 FYGNSDRTSTVQNLLRPPIISRFIRLIPLGWH-VRIAIRMELLECV 220
GNS+ L PPI++RF+R IP+ H + + +R+EL CV
Sbjct: 141 LDGNSNPYDIFLKDLEPPIVARFVRFIPVTDHSMNVCMRVELYGCV 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,458,428
Number of Sequences: 37866
Number of extensions: 423465
Number of successful extensions: 915
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 803
Number of HSP's gapped (non-prelim): 59
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.