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Search of human proteins with 239749395
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749395 PREDICTED: p150-like [Homo sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749395 PREDICTED: p150-like [Homo sapiens] 550 e-157
gi|239754856 PREDICTED: p150-like [Homo sapiens] 547 e-156
gi|239743530 PREDICTED: p150-like [Homo sapiens] 545 e-155
gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens] 398 e-111
gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo ... 398 e-111
gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo ... 398 e-111
gi|239754371 PREDICTED: hypothetical protein [Homo sapiens] 343 9e-95
gi|239748922 PREDICTED: hypothetical protein [Homo sapiens] 343 9e-95
gi|239742944 PREDICTED: hypothetical protein [Homo sapiens] 343 9e-95
gi|239756280 PREDICTED: hypothetical protein XP_002344872 [Homo ... 253 9e-68
gi|239750807 PREDICTED: hypothetical protein XP_002347566 [Homo ... 253 9e-68
gi|239745167 PREDICTED: hypothetical protein XP_002343386 [Homo ... 253 9e-68
gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo ... 109 3e-24
gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo ... 51 9e-07
gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo ... 51 9e-07
gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo ... 51 9e-07
gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo ... 51 9e-07
gi|38570064 hypothetical protein LOC136895 [Homo sapiens] 32 0.56
gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo ... 30 1.6
gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo ... 30 1.6
gi|154813197 talpid3 protein [Homo sapiens] 30 1.6
gi|28626523 olfactory receptor, family 2, subfamily H, member 1 ... 30 1.6
gi|6912622 RAD54 homolog B [Homo sapiens] 30 2.1
gi|42476164 POU class 2 homeobox 1 [Homo sapiens] 29 3.6
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap... 28 8.1
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap... 28 8.1
>gi|239749395 PREDICTED: p150-like [Homo sapiens]
Length = 262
Score = 550 bits (1416), Expect = e-157
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL
Sbjct: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
Query: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF
Sbjct: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
Query: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK
Sbjct: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
Query: 181 DFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
DFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR
Sbjct: 181 DFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
Query: 241 IYNELKQIYKKKTTPSKSGPRT 262
IYNELKQIYKKKTTPSKSGPRT
Sbjct: 241 IYNELKQIYKKKTTPSKSGPRT 262
>gi|239754856 PREDICTED: p150-like [Homo sapiens]
Length = 262
Score = 547 bits (1409), Expect = e-156
Identities = 261/262 (99%), Positives = 261/262 (99%)
Query: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL
Sbjct: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
Query: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF
Sbjct: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
Query: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK
Sbjct: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
Query: 181 DFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
DFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR
Sbjct: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
Query: 241 IYNELKQIYKKKTTPSKSGPRT 262
IYNELKQIYKKKTTPSKSGPRT
Sbjct: 241 IYNELKQIYKKKTTPSKSGPRT 262
>gi|239743530 PREDICTED: p150-like [Homo sapiens]
Length = 262
Score = 545 bits (1405), Expect = e-155
Identities = 260/262 (99%), Positives = 261/262 (99%)
Query: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
M+MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL
Sbjct: 1 MQMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
Query: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF
Sbjct: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
Query: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK
Sbjct: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
Query: 181 DFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
DFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR
Sbjct: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
Query: 241 IYNELKQIYKKKTTPSKSGPRT 262
IYNELKQIYKKKTTPSKSGPRT
Sbjct: 241 IYNELKQIYKKKTTPSKSGPRT 262
>gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]
Length = 295
Score = 398 bits (1023), Expect = e-111
Identities = 187/194 (96%), Positives = 189/194 (97%)
Query: 60 LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119
LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 2 LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
Query: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179
FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 62 FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121
Query: 180 KDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239
KDFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181
Query: 240 RIYNELKQIYKKKT 253
RIYNE KQIYKKKT
Sbjct: 182 RIYNEFKQIYKKKT 195
>gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo
sapiens]
Length = 295
Score = 398 bits (1023), Expect = e-111
Identities = 187/194 (96%), Positives = 189/194 (97%)
Query: 60 LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119
LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 2 LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
Query: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179
FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 62 FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121
Query: 180 KDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239
KDFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181
Query: 240 RIYNELKQIYKKKT 253
RIYNE KQIYKKKT
Sbjct: 182 RIYNEFKQIYKKKT 195
>gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo
sapiens]
Length = 295
Score = 398 bits (1023), Expect = e-111
Identities = 187/194 (96%), Positives = 189/194 (97%)
Query: 60 LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119
LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 2 LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
Query: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179
FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 62 FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121
Query: 180 KDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239
KDFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181
Query: 240 RIYNELKQIYKKKT 253
RIYNE KQIYKKKT
Sbjct: 182 RIYNEFKQIYKKKT 195
>gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]
Length = 224
Score = 343 bits (880), Expect = 9e-95
Identities = 161/196 (82%), Positives = 174/196 (88%)
Query: 46 KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIF 105
K L +KN AGGI LPDFKL+YKATVTKTAWYWYQNR IDQW+RTE SEI H+YN+LIF
Sbjct: 29 KCSLMEKNTAGGIMLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIF 88
Query: 106 DKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTL 165
DKP+KNK+WGKD LF+KWCWENWLA CRKLKLDPFLTPY KINSRWIKDLNV+ KTIK L
Sbjct: 89 DKPDKNKKWGKDLLFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKIL 148
Query: 166 EENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWE 225
EENLG T+QDIGMGKDFM KTPKA+ATKAKIDKWD IKLKSF TAKE IRVNRQPT+W+
Sbjct: 149 EENLGNTIQDIGMGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWK 208
Query: 226 KIFATYSSDKGLISRI 241
KIFA Y SDKGLISRI
Sbjct: 209 KIFAIYPSDKGLISRI 224
>gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]
Length = 224
Score = 343 bits (880), Expect = 9e-95
Identities = 161/196 (82%), Positives = 174/196 (88%)
Query: 46 KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIF 105
K L +KN AGGI LPDFKL+YKATVTKTAWYWYQNR IDQW+RTE SEI H+YN+LIF
Sbjct: 29 KCSLMEKNTAGGIMLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIF 88
Query: 106 DKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTL 165
DKP+KNK+WGKD LF+KWCWENWLA CRKLKLDPFLTPY KINSRWIKDLNV+ KTIK L
Sbjct: 89 DKPDKNKKWGKDLLFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKIL 148
Query: 166 EENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWE 225
EENLG T+QDIGMGKDFM KTPKA+ATKAKIDKWD IKLKSF TAKE IRVNRQPT+W+
Sbjct: 149 EENLGNTIQDIGMGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWK 208
Query: 226 KIFATYSSDKGLISRI 241
KIFA Y SDKGLISRI
Sbjct: 209 KIFAIYPSDKGLISRI 224
>gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 224
Score = 343 bits (880), Expect = 9e-95
Identities = 161/196 (82%), Positives = 174/196 (88%)
Query: 46 KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIF 105
K L +KN AGGI LPDFKL+YKATVTKTAWYWYQNR IDQW+RTE SEI H+YN+LIF
Sbjct: 29 KCSLMEKNTAGGIMLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIF 88
Query: 106 DKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTL 165
DKP+KNK+WGKD LF+KWCWENWLA CRKLKLDPFLTPY KINSRWIKDLNV+ KTIK L
Sbjct: 89 DKPDKNKKWGKDLLFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKIL 148
Query: 166 EENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWE 225
EENLG T+QDIGMGKDFM KTPKA+ATKAKIDKWD IKLKSF TAKE IRVNRQPT+W+
Sbjct: 149 EENLGNTIQDIGMGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWK 208
Query: 226 KIFATYSSDKGLISRI 241
KIFA Y SDKGLISRI
Sbjct: 209 KIFAIYPSDKGLISRI 224
>gi|239756280 PREDICTED: hypothetical protein XP_002344872 [Homo
sapiens]
Length = 283
Score = 253 bits (647), Expect = 9e-68
Identities = 117/126 (92%), Positives = 121/126 (96%)
Query: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
+KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRA IAKS LSQKNK GGITL
Sbjct: 156 VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSSLSQKNKTGGITL 215
Query: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
PDFKLYYKATVTKT+WYWYQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSLF
Sbjct: 216 PDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLF 275
Query: 121 NKWCWE 126
NKW W+
Sbjct: 276 NKWWWK 281
>gi|239750807 PREDICTED: hypothetical protein XP_002347566 [Homo
sapiens]
Length = 283
Score = 253 bits (647), Expect = 9e-68
Identities = 117/126 (92%), Positives = 121/126 (96%)
Query: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
+KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRA IAKS LSQKNK GGITL
Sbjct: 156 VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSSLSQKNKTGGITL 215
Query: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
PDFKLYYKATVTKT+WYWYQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSLF
Sbjct: 216 PDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLF 275
Query: 121 NKWCWE 126
NKW W+
Sbjct: 276 NKWWWK 281
>gi|239745167 PREDICTED: hypothetical protein XP_002343386 [Homo
sapiens]
Length = 283
Score = 253 bits (647), Expect = 9e-68
Identities = 117/126 (92%), Positives = 121/126 (96%)
Query: 1 MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
+KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRA IAKS LSQKNK GGITL
Sbjct: 156 VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSSLSQKNKTGGITL 215
Query: 61 PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
PDFKLYYKATVTKT+WYWYQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSLF
Sbjct: 216 PDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLF 275
Query: 121 NKWCWE 126
NKW W+
Sbjct: 276 NKWWWK 281
>gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo
sapiens]
Length = 137
Score = 109 bits (272), Expect = 3e-24
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 178 MGKDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 237
MG+DF+++TPKAMAT+ KI KWD KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 1 MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
Query: 238 ISRIYNELKQIYKKKTTPSK 257
I RIY E QIYKKK K
Sbjct: 61 ICRIYKE--QIYKKKKNHQK 78
>gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo
sapiens]
Length = 240
Score = 51.2 bits (121), Expect = 9e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
F YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5 FCIYSSDKGLISRIYNELKQIYKKKT 30
>gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo
sapiens]
Length = 240
Score = 51.2 bits (121), Expect = 9e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
F YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5 FCIYSSDKGLISRIYNELKQIYKKKT 30
>gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo
sapiens]
Length = 240
Score = 51.2 bits (121), Expect = 9e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
F YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5 FCIYSSDKGLISRIYNELKQIYKKKT 30
>gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo
sapiens]
Length = 240
Score = 51.2 bits (121), Expect = 9e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
F YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5 FCIYSSDKGLISRIYNELKQIYKKKT 30
>gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
Length = 590
Score = 32.0 bits (71), Expect = 0.56
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 182 FMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKW 224
F K PK A ++ WD I C+AKE I+ N + + W
Sbjct: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
>gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo
sapiens]
Length = 1723
Score = 30.4 bits (67), Expect = 1.6
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 76 WYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWG 115
W Y+N + W P E TP +N + P K++ WG
Sbjct: 698 WNDYKNNNSSNWGGGRPDEKTPSSWN----ENPSKDQGWG 733
>gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo
sapiens]
Length = 1833
Score = 30.4 bits (67), Expect = 1.6
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 76 WYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWG 115
W Y+N + W P E TP +N + P K++ WG
Sbjct: 698 WNDYKNNNSSNWGGGRPDEKTPSSWN----ENPSKDQGWG 733
>gi|154813197 talpid3 protein [Homo sapiens]
Length = 1472
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 82 RDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFL 141
+ +D+W +T +EI + + + Q ++ K ++ +T +K
Sbjct: 538 KTVDEWIKTISAEIQGLLKATTVIQDEDYMLQ-----VYGKPVYQGHRSTLKK------- 585
Query: 142 TPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGKDFMSKTPKAMATKAK 195
PY + NS K RPK I+ ++ G ++ I DF + PK M +K K
Sbjct: 586 GPYLRFNSPSPKSRPQRPKVIERVK---GTKVKSIRTQTDFYATKPKKMDSKMK 636
>gi|28626523 olfactory receptor, family 2, subfamily H, member 1
[Homo sapiens]
Length = 316
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 204 LKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTTPSKSG 259
L S+ + +R+N T W K F T SS +++ Y+ + +Y + P G
Sbjct: 213 LASYGATAQAVLRIN-SATAWRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYAQG 267
>gi|6912622 RAD54 homolog B [Homo sapiens]
Length = 910
Score = 30.0 bits (66), Expect = 2.1
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 97 PHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLT----PYTKINSRWI 152
P+ N L+ +P+KN QW +FNK C+ + +DP+L P+ K ++
Sbjct: 257 PYTPNSLVMPRPDKNHQW----VFNKNCF-----PLVDVVIDPYLVYHLRPHQKEGIIFL 307
Query: 153 KD------LNVRPKTIKTLEENLGITLQDIGM 178
+ +N R I E LG TLQ I +
Sbjct: 308 YECVMGMRMNGRCGAILADEMGLGKTLQCISL 339
>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
Length = 743
Score = 29.3 bits (64), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 126 ENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGKDFMSK 185
E WL L D L+ + +NS I+ L+ R K ++E N+ + L+ K F+
Sbjct: 347 EKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALE-----KSFLEN 401
Query: 186 TPKAMATKAKIDKWDQIKLKS------FCTAKETTIRVN 218
I DQ+ ++ FC ++ R+N
Sbjct: 402 QKPTSEEITMIA--DQLNMEKEVIRVWFCNRRQKEKRIN 438
>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
sapiens]
Length = 1094
Score = 28.1 bits (61), Expect = 8.1
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 92 PSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRW 151
PSE+ H++ +L P ++ W + + W R++ DP P+ K+ R+
Sbjct: 267 PSEVLRHVFAFL----PVEDLYWNLSLVCHLW---------REIISDPLFIPWKKLYHRY 313
Query: 152 IKDLNVRPKTIKTLEENLGI 171
+ + + + N GI
Sbjct: 314 LMNEEQAVSKVDGILSNCGI 333
>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
sapiens]
Length = 1043
Score = 28.1 bits (61), Expect = 8.1
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 92 PSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRW 151
PSE+ H++ +L P ++ W + + W R++ DP P+ K+ R+
Sbjct: 216 PSEVLRHVFAFL----PVEDLYWNLSLVCHLW---------REIISDPLFIPWKKLYHRY 262
Query: 152 IKDLNVRPKTIKTLEENLGI 171
+ + + + N GI
Sbjct: 263 LMNEEQAVSKVDGILSNCGI 282
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,101,052
Number of Sequences: 37866
Number of extensions: 424309
Number of successful extensions: 930
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 26
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.