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Search of human proteins with 239749279
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 357 2e-99
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 357 2e-99
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 94 5e-20
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 92 2e-19
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 92 3e-19
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 88 3e-18
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 88 3e-18
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 79 2e-15
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 77 7e-15
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 75 3e-14
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 74 6e-14
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 73 1e-13
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 69 2e-12
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 64 8e-11
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 51 5e-07
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 48 3e-06
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 47 1e-05
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 47 1e-05
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 46 1e-05
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 44 6e-05
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 44 6e-05
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 44 6e-05
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 42 2e-04
gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 42 2e-04
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 42 3e-04
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 41 4e-04
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 41 5e-04
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 41 5e-04
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 41 5e-04
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 7e-04
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 357 bits (917), Expect = 2e-99
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ
Sbjct: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC 120
APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC
Sbjct: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC 120
Query: 121 FLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGLVAVNICRQKLSTNQ 167
FLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGLVAVNICRQKLSTNQ
Sbjct: 121 FLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGLVAVNICRQKLSTNQ 167
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 357 bits (917), Expect = 2e-99
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ
Sbjct: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC 120
APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC
Sbjct: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC 120
Query: 121 FLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGLVAVNICRQKLSTNQ 167
FLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGLVAVNICRQKLSTNQ
Sbjct: 121 FLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGLVAVNICRQKLSTNQ 167
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 94.0 bits (232), Expect = 5e-20
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 9 MALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHY 68
++LC+L H DA VIQ+PR++VT+ G+ VTL C H+ ++WY+Q + +LL ++
Sbjct: 46 VSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLIYF 105
Query: 69 YDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHK 127
+ +++ P D F ++ PN SF L I+ D+A+Y CA+S T LQ V K
Sbjct: 106 NNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQK 165
Query: 128 PHCFPD----PGAFSRTSPSPP 145
P CF P + P PP
Sbjct: 166 PWCFSFSFYLPAVLGKVFPVPP 187
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 92.0 bits (227), Expect = 2e-19
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
MG LL W+A CLLG H A V Q+P +VT+ GK V L C H +YWY+Q Q
Sbjct: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
Query: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQ 119
+ L ++ +++ P D F + R S L I+ D+A+YLCA+S T
Sbjct: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWH 200
Query: 120 CFLLSVHKPH 129
LL HKPH
Sbjct: 201 SRLLPAHKPH 210
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 91.7 bits (226), Expect = 3e-19
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
M LL + LCLLG DA V Q PR++VT+ G+ VT+ C L HN ++WY+Q Q
Sbjct: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
Query: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQ 119
+LL ++ ++ +++ P D F + P+ + L I+ D+A+Y CA+ T LQ
Sbjct: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
Query: 120 CFLLSVHKPHCF 131
LL V KP CF
Sbjct: 121 NHLLPVQKPWCF 132
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 88.2 bits (217), Expect = 3e-18
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
MG LL W+A CLL +A V+Q+PRY++ + +PV C+ HN +YWY Q Q
Sbjct: 30 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 89
Query: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDT 116
P+LL Y +++ +++ P D F + R L I+ LGD+A+YLCA+S DT
Sbjct: 90 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDT 146
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 88.2 bits (217), Expect = 3e-18
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
MG LL W+A CLL +A V+Q+PRY++ + +PV C+ HN +YWY Q Q
Sbjct: 1 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 60
Query: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDT 116
P+LL Y +++ +++ P D F + R L I+ LGD+A+YLCA+S DT
Sbjct: 61 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDT 117
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 79.0 bits (193), Expect = 2e-15
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 11 LCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYD 70
+CLLG G +A V+QNPR+ V + G+ L CS H+ +YWY+Q + K + +
Sbjct: 44 ICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMVYLQK 103
Query: 71 KDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHK 127
++ +E+ P + F + P L I+ GD+A Y CA+S T +Q +LSVHK
Sbjct: 104 ENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILSVHK 161
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 77.0 bits (188), Expect = 7e-15
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
M GLL A LL G +A V Q P+++V + G+ +TL C+Q +NH MYWY+Q
Sbjct: 15 MSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGM 74
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC 120
+L+ + + + + PD + R L + S ++Y CA+S T L
Sbjct: 75 GLRLIHYSVGEGTTAKGEVPDGYNVSRLKKQNFLLGLESAAPSQTSVYFCASSYSTVLHG 134
Query: 121 FLLSVH--KPHCFPDPGAFSRTSPSPPLTTIGS----GLVAVNICRQKLST 165
LLS K C P P + P G+ G ++++C+ L +
Sbjct: 135 CLLSAQKGKGRCCPPPQHRFSDALGPSTENFGAPMGPGSASLHLCQVPLQS 185
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 74.7 bits (182), Expect = 3e-14
Identities = 39/104 (37%), Positives = 56/104 (53%)
Query: 10 ALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYY 69
A LLGTG DA V Q PR ++T+ GK + L CSQT H+ MYWY+Q +L+++ +
Sbjct: 10 AFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQLIYYSF 69
Query: 70 DKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATS 113
D N+ + D + R + L + S A+Y CATS
Sbjct: 70 DVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 73.9 bits (180), Expect = 6e-14
Identities = 43/123 (34%), Positives = 57/123 (46%)
Query: 5 LLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKL 64
LL +M LG G +A + Q PRY V GK +TL CSQT+ H+ MYWYQQ L
Sbjct: 5 LLCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHL 64
Query: 65 LFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLS 124
+ + Y + + D R T L + S + YLCA+S T L + S
Sbjct: 65 IHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLESARPSHTSQYLCASSEYTVLHGYRHS 124
Query: 125 VHK 127
K
Sbjct: 125 AQK 127
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 73.2 bits (178), Expect = 1e-13
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 5 LLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKL 64
LL W+ LCLL GH + V Q PR++VT G+ V L C + H ++WY+Q Q KL
Sbjct: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
Query: 65 LFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLL 123
L + ++ ++ P + F + RPN + L I D+A+YL ++ L F
Sbjct: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLSQF-- 122
Query: 124 SVHKPHCFP 132
P C P
Sbjct: 123 ---PPGCKP 128
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 68.6 bits (166), Expect = 2e-12
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 14 LGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYDKDF 73
L T H +A V Q P + V + G+ VTL C H+ +YWY++ + K L H+ +
Sbjct: 9 LPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFLLHFVKESK 68
Query: 74 NNEADTPDN-FQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSV 125
+E+ P+N F + R ++ L ++ L D+ +Y CA+S+DT L L+V
Sbjct: 69 QDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLHSRALAV 121
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 63.5 bits (153), Expect = 8e-11
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 11 LCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYD 70
LCLL G V Q P++ V G+ L C+ H+ ++WYQQ K L + +
Sbjct: 11 LCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLISFQN 70
Query: 71 KDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTEL 118
++ +E P + F ++ S C L+I++ L D+A+Y CA+S+ T L
Sbjct: 71 ENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 50.8 bits (120), Expect = 5e-07
Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 5 LLHWMALCLLGTG----HGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKS 58
LL + L L G G HG+ ++ Q+P G+ TLSC SQ+++ + + WYQQK
Sbjct: 7 LLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKP 66
Query: 59 SQAPKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTEL 118
QAP+LL + P F T F L I S D A+Y C +D L
Sbjct: 67 GQAPRLLIYGAS---TRATGIPARFSGSGSGTDFT-LTISSLQPEDFAVYYC--QQDYNL 120
Query: 119 QCFLLSVHKPHCFPDPGAFSRTSPSPPLTT 148
++ H+ P F+R PL T
Sbjct: 121 PPTVIQ-HETKTSTRPSVFTRFYQLLPLQT 149
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 48.1 bits (113), Expect = 3e-06
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L ++ L L G+ ++ Q+P G+ TLSC SQ+++ + + WYQQK Q
Sbjct: 4 PAQLLFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQ 63
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQC 120
AP+LL + P F T F L I S D A+Y C +D L
Sbjct: 64 APRLLIYGAS---TRATGIPARFSGSGSGTDFT-LTISSLQPEDFAVYYC--QQDYNLPP 117
Query: 121 FLLSVHKPHCFPDPGAFSRTSPSPPLTT 148
++ H+ P F+R PL T
Sbjct: 118 TVIQ-HETKTSTRPSVFTRFYQLLPLQT 144
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L ++ L L G+ ++ Q+P G+ TLSC SQ+++ + + WYQQK
Sbjct: 4 PAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGL 63
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLC---ATSRDTE 117
AP+LL YD + PD F T F L I D A+Y C +S T
Sbjct: 64 APRLLI--YDAS-SRATGIPDRFSGSGSGTDFT-LTISRLEPEDFAVYYCQQYGSSPPTV 119
Query: 118 LQCFLLSVHKPHCF 131
+Q + +P F
Sbjct: 120 IQLETKTSARPSLF 133
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L ++ L L G+ ++ Q+P G+ TLSC SQ+++ + + WYQQK
Sbjct: 4 PAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGL 63
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLC---ATSRDTE 117
AP+LL YD + PD F T F L I D A+Y C +S T
Sbjct: 64 APRLLI--YDAS-SRATGIPDRFSGSGSGTDFT-LTISRLEPEDFAVYYCQQYGSSPPTV 119
Query: 118 LQCFLLSVHKPHCF 131
+Q + +P F
Sbjct: 120 IQLETKTSARPSLF 133
>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
Length = 145
Score = 46.2 bits (108), Expect = 1e-05
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNV----MYWYQQKS 58
P LL C TG G V+ P + G + L+C+ +H++ +YWYQQ+
Sbjct: 5 PVLLMLFVYC---TGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRP 61
Query: 59 SQAPKLLFHYYDK-DFNNEADTPDNFQ-SRRPNTSFCFLDIRSPGLGDAAMYLCA 111
P+ L Y+ + D + P F S+ + +L I D AMY CA
Sbjct: 62 GHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCA 116
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 43.9 bits (102), Expect = 6e-05
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L + L L D V Q+P G VT++C SQ ++ N + WYQQK Q
Sbjct: 6 PAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGIS-NGLSWYQQKPGQ 64
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCA---TSRDTE 117
AP LL + + ++ P F T F L I S D A Y C T+ T
Sbjct: 65 APTLLIYAAS---SLQSGVPSRFSGSGSGTDFT-LTISSLQPEDVATYYCLQDYTTPFTV 120
Query: 118 LQCFLLSVHKPHC 130
LQ + + C
Sbjct: 121 LQAITKTPQRSRC 133
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 43.9 bits (102), Expect = 6e-05
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L + L L D V Q+P G VT++C SQ ++ N + WYQQK Q
Sbjct: 6 PAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGIS-NGLSWYQQKPGQ 64
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCA---TSRDTE 117
AP LL + + ++ P F T F L I S D A Y C T+ T
Sbjct: 65 APTLLIYAAS---SLQSGVPSRFSGSGSGTDFT-LTISSLQPEDVATYYCLQDYTTPFTV 120
Query: 118 LQCFLLSVHKPHC 130
LQ + + C
Sbjct: 121 LQAITKTPQRSRC 133
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 43.9 bits (102), Expect = 6e-05
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L + L L D V Q+P G VT++C SQ ++ N + WYQQK Q
Sbjct: 6 PAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGIS-NGLSWYQQKPGQ 64
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCA---TSRDTE 117
AP LL + + ++ P F T F L I S D A Y C T+ T
Sbjct: 65 APTLLIYAAS---SLQSGVPSRFSGSGSGTDFT-LTISSLQPEDVATYYCLQDYTTPFTV 120
Query: 118 LQCFLLSVHKPHC 130
LQ + + C
Sbjct: 121 LQAITKTPQRSRC 133
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 42.4 bits (98), Expect = 2e-04
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 5 LLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQAP 62
LL + L L GT D + Q+P G VT++C SQ ++ N + WYQQK +AP
Sbjct: 18 LLGLLLLWLPGT-RCDIQMTQSPSSLSASVGDRVTITCRASQGIS-NSLAWYQQKPGKAP 75
Query: 63 KLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLC 110
KLL + + E+ P F T + L I S D A Y C
Sbjct: 76 KLLLYAASR---LESGVPSRFSGSGSGTDYT-LTISSLQPEDFATYYC 119
>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
Length = 123
Score = 42.0 bits (97), Expect = 2e-04
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 35 GKPVTLSCSQTLNHNVMY-----WYQQKSSQAPKLLFHYY-DKDFNNEADTPDNFQSRRP 88
G+ LSC+ + H + WYQQ++ AP+ L +Y ++D + AD PD F + +
Sbjct: 33 GQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKD 92
Query: 89 NT-SFCFLDIRSPGLGDAAMYLCA 111
+ C L I D A Y C+
Sbjct: 93 EAHNACVLTISPVQPEDDADYYCS 116
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 41.6 bits (96), Expect = 3e-04
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 3 PGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQ 60
P L + L L D + Q+P + G VT++C SQ ++ + + WYQQK +
Sbjct: 6 PAQLLGLLLLWLPGARCDIQLTQSPSFLSASVGDRVTITCRASQGIS-SYLAWYQQKPGK 64
Query: 61 APKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLC 110
APKLL + ++ P F T F L I S D A Y C
Sbjct: 65 APKLLIYAAS---TLQSGVPSRFSGSGSGTEFT-LTISSLQPEDFATYYC 110
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 41.2 bits (95), Expect = 4e-04
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 35 GKPVTLSCS---QTLNHNVMYWYQQKSSQAPKLLFHYYDKDFNNEADTPDNFQSRRPNTS 91
G+ VT+SCS + N + WYQQ APKLL + + + PD F + TS
Sbjct: 60 GQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIY---SNNQRPSGVPDRFSGSKSGTS 116
Query: 92 FCFLDIRSPGLGDAAMYLCATSRDT 116
L I D A Y CA D+
Sbjct: 117 -ASLAISGLQSEDEADYYCAAWDDS 140
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 40.8 bits (94), Expect = 5e-04
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 4 GLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQA 61
GLL + L L G D + Q+P G VT++C SQ +++N + WYQQK +
Sbjct: 159 GLLGLLGLWLPGV-RCDIQMTQSPSSLSASVGGRVTITCRASQGISNN-LNWYQQKPRKT 216
Query: 62 PKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATS 113
PKLL + + ++ P F T + L I S D A Y C S
Sbjct: 217 PKLLIYAAS---SLQSGIPSRFSDSGSGTDYT-LTISSLQPEDFATYYCQQS 264
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 40.8 bits (94), Expect = 5e-04
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 4 GLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQA 61
GLL + L L G D + Q+P G VT++C SQ +++N + WYQQK +
Sbjct: 644 GLLGLLGLWLPGA-RCDIQMTQSPSSLSASVGGRVTITCRASQGISNN-LNWYQQKPRKT 701
Query: 62 PKLLFHYYDKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATS 113
PKLL + + ++ P F T + L I S D A Y C S
Sbjct: 702 PKLLIYAAS---SLQSGIPSRFSDSGSGTDYT-LTISSLQPEDFATYYCQQS 749
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 40.8 bits (94), Expect = 5e-04
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 20 DAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQAPKLLFHYYDKDFNNEA 77
D + Q+P G VT++C SQ +++N + WYQQK + PKLL + + ++
Sbjct: 534 DIQMTQSPSSLSASVGDRVTITCRASQGISNN-LNWYQQKPGKTPKLLIYAAS---SLQS 589
Query: 78 DTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDT 116
P F + L IRS D A Y C S T
Sbjct: 590 GIPSRFSDSGSGADYT-LTIRSLQPEDFATYYCQQSDST 627
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 40.4 bits (93), Expect = 7e-04
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 20 DAMVIQNPRYQVTQFGKPVTLSC--SQTLNHNVMYWYQQKSSQAPKLLFHYYDKDFNNEA 77
D + Q+P G VT++C SQ +++N + WYQQK + PKLL + + ++
Sbjct: 194 DIQMTQSPSSLSASVGDRVTITCRASQGISNN-LNWYQQKPGKTPKLLIYAAS---SLQS 249
Query: 78 DTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDT 116
P F T + L I S D A Y C S T
Sbjct: 250 GIPSRFSDSGSGTDYT-LTISSLQPEDFATYYCQQSDST 287
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,730,872
Number of Sequences: 37866
Number of extensions: 350333
Number of successful extensions: 941
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 861
Number of HSP's gapped (non-prelim): 90
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.