Search of human proteins with 239748046

Search of human proteins with 239748046

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748046 PREDICTED: hypothetical protein XP_002346501 [Homo
sapiens]
         (411 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748046 PREDICTED: hypothetical protein XP_002346501 [Homo ...   873   0.0  
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ...    45   2e-04
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ...    45   2e-04
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ...    45   2e-04
gi|117306178 hypothetical protein LOC55731 [Homo sapiens]              39   0.011
gi|117306174 hypothetical protein LOC55731 [Homo sapiens]              39   0.011
gi|5454102 transforming, acidic coiled-coil containing protein 3...    38   0.019
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ...    37   0.043
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            35   0.095
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            35   0.095
gi|38569471 MUF1 protein [Homo sapiens]                                35   0.095
gi|50843827 activating molecule in beclin-1-regulated autophagy ...    34   0.21 
gi|222080092 WD repeat domain 91 [Homo sapiens]                        34   0.28 
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]             34   0.28 
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...    34   0.28 
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...    34   0.28 
gi|20270245 GLI-Kruppel family member GLI4 [Homo sapiens]              34   0.28 
gi|155723000 mixed lineage kinase 4 [Homo sapiens]                     33   0.36 
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              33   0.47 
gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo ...    33   0.61 
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]            33   0.61 
gi|239753382 PREDICTED: hypothetical protein [Homo sapiens]            33   0.61 
gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo ...    33   0.61 
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]            33   0.61 
gi|239747949 PREDICTED: hypothetical protein XP_002346484 [Homo ...    33   0.61 
gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo ...    33   0.61 
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]             33   0.61 
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ...    33   0.61 
gi|239741844 PREDICTED: hypothetical protein XP_002342324 [Homo ...    33   0.61 
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]        33   0.61 

>gi|239748046 PREDICTED: hypothetical protein XP_002346501 [Homo
           sapiens]
          Length = 411

 Score =  873 bits (2255), Expect = 0.0
 Identities = 411/411 (100%), Positives = 411/411 (100%)

Query: 1   MGNRVVHQACPQGGPVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEP 60
           MGNRVVHQACPQGGPVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEP
Sbjct: 1   MGNRVVHQACPQGGPVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEP 60

Query: 61  EFLGTAACTQSGASLLRAESPQLFQLQPGQGHLQIECAGPLRTHVLRWPFFLGWDPRVQV 120
           EFLGTAACTQSGASLLRAESPQLFQLQPGQGHLQIECAGPLRTHVLRWPFFLGWDPRVQV
Sbjct: 61  EFLGTAACTQSGASLLRAESPQLFQLQPGQGHLQIECAGPLRTHVLRWPFFLGWDPRVQV 120

Query: 121 RASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSP 180
           RASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSP
Sbjct: 121 RASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSP 180

Query: 181 LTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSLW 240
           LTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSLW
Sbjct: 181 LTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSLW 240

Query: 241 QQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHPSAASPQPGCQGLAHELPQA 300
           QQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHPSAASPQPGCQGLAHELPQA
Sbjct: 241 QQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHPSAASPQPGCQGLAHELPQA 300

Query: 301 VHEGVDHGRLGLPHTVHGQPRGHRIQGHHLAPLNPSLNSQLSWPLADSSPFPATPTSKVP 360
           VHEGVDHGRLGLPHTVHGQPRGHRIQGHHLAPLNPSLNSQLSWPLADSSPFPATPTSKVP
Sbjct: 301 VHEGVDHGRLGLPHTVHGQPRGHRIQGHHLAPLNPSLNSQLSWPLADSSPFPATPTSKVP 360

Query: 361 LSLVGCAHPAQPLLYPLHFPSTWGCSSFKGTAMRGAEPDVSTACGLRDNLF 411
           LSLVGCAHPAQPLLYPLHFPSTWGCSSFKGTAMRGAEPDVSTACGLRDNLF
Sbjct: 361 LSLVGCAHPAQPLLYPLHFPSTWGCSSFKGTAMRGAEPDVSTACGLRDNLF 411


>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 58/200 (29%), Positives = 76/200 (38%), Gaps = 29/200 (14%)

Query: 112 LGWDPRVQVRASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAG-RVAGCPKA 170
           L WD    V   + G + GG G  R  G     L   R++    G G   G R A     
Sbjct: 76  LSWDRNYLV---ITGAWAGGPGNWRAEGETEAPLTVGRDSGLEAGVGVGCGLRTAQPAGF 132

Query: 171 QLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSR--LGWGGGRCVRVLRASCVGPRGPG 228
           +L A + P    P GGP      GL G R L  S    G  G  C   L   C  P  P 
Sbjct: 133 ELLAWQHPQK--PPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGL--CCAHPVRP- 187

Query: 229 CGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHP------- 281
            GH   G + +W + + G  + A  AA  + Q  G  ++       + +S HP       
Sbjct: 188 AGHVACG-AGIWTRAQAGPHKRAVGAAAGAAQSSGLFSKWV---PCQPLSQHPTGPEPSS 243

Query: 282 ------SAASPQPGCQGLAH 295
                 +AASP+P C G  H
Sbjct: 244 RPHALSTAASPRP-CWGAGH 262


>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 58/200 (29%), Positives = 76/200 (38%), Gaps = 29/200 (14%)

Query: 112 LGWDPRVQVRASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAG-RVAGCPKA 170
           L WD    V   + G + GG G  R  G     L   R++    G G   G R A     
Sbjct: 76  LSWDRNYLV---ITGAWAGGPGNWRAEGETEAPLTVGRDSGLEAGVGVGCGLRTAQPAGF 132

Query: 171 QLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSR--LGWGGGRCVRVLRASCVGPRGPG 228
           +L A + P    P GGP      GL G R L  S    G  G  C   L   C  P  P 
Sbjct: 133 ELLAWQHPQK--PPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGL--CCAHPVRP- 187

Query: 229 CGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHP------- 281
            GH   G + +W + + G  + A  AA  + Q  G  ++       + +S HP       
Sbjct: 188 AGHLACG-AGIWTRAQAGPHKRAVGAAAGAAQSSGLFSKWV---PCQPLSQHPTGPEPSS 243

Query: 282 ------SAASPQPGCQGLAH 295
                 +AASP+P C G  H
Sbjct: 244 RPHALSTAASPRP-CWGAGH 262


>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 58/200 (29%), Positives = 76/200 (38%), Gaps = 29/200 (14%)

Query: 112 LGWDPRVQVRASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAG-RVAGCPKA 170
           L WD    V   + G + GG G  R  G     L   R++    G G   G R A     
Sbjct: 76  LSWDRNYLV---ITGAWAGGPGNWRAEGETEAPLTVGRDSGLEAGVGVGCGLRTAQPAGF 132

Query: 171 QLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSR--LGWGGGRCVRVLRASCVGPRGPG 228
           +L A + P    P GGP      GL G R L  S    G  G  C   L   C  P  P 
Sbjct: 133 ELLAWQHPQK--PPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGL--CCAHPVRP- 187

Query: 229 CGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHP------- 281
            GH   G + +W + + G  + A  AA  + Q  G  ++       + +S HP       
Sbjct: 188 AGHVACG-AGIWTRAQAGPHKRAVGAAAGAAQSSGLFSKWV---PCQPLSQHPTGPEPSS 243

Query: 282 ------SAASPQPGCQGLAH 295
                 +AASP+P C G  H
Sbjct: 244 RPHALSTAASPRP-CWGAGH 262


>gi|117306178 hypothetical protein LOC55731 [Homo sapiens]
          Length = 562

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 16/94 (17%)

Query: 279 AHPSAASPQPGCQGLAHELPQAVHEGVDHGRLGLPHTVHGQPRGHRIQGHHLAPLNPSLN 338
           +HP +   QP  QGL H  P A  +G+          VH Q   H+   H   P NP L+
Sbjct: 185 SHPQSLQ-QP--QGLGHPQPMAQTQGL----------VHPQALAHQGLQH---PHNPLLH 228

Query: 339 SQLSWPLADSSPFPATPTSKVPLSLVGCAHPAQP 372
                P +D+ P     TS +PLS+      +QP
Sbjct: 229 GGRKMPDSDAPPNVTVSTSTIPLSMAATLQHSQP 262


>gi|117306174 hypothetical protein LOC55731 [Homo sapiens]
          Length = 562

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 16/94 (17%)

Query: 279 AHPSAASPQPGCQGLAHELPQAVHEGVDHGRLGLPHTVHGQPRGHRIQGHHLAPLNPSLN 338
           +HP +   QP  QGL H  P A  +G+          VH Q   H+   H   P NP L+
Sbjct: 185 SHPQSLQ-QP--QGLGHPQPMAQTQGL----------VHPQALAHQGLQH---PHNPLLH 228

Query: 339 SQLSWPLADSSPFPATPTSKVPLSLVGCAHPAQP 372
                P +D+ P     TS +PLS+      +QP
Sbjct: 229 GGRKMPDSDAPPNVTVSTSTIPLSMAATLQHSQP 262


>gi|5454102 transforming, acidic coiled-coil containing protein 3
           [Homo sapiens]
          Length = 838

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 51/196 (26%), Positives = 69/196 (35%), Gaps = 34/196 (17%)

Query: 182 TPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSLWQ 241
           +P+ G GS+ E G G L  L+CS                    + PG    Q+ S     
Sbjct: 133 SPAFGSGSSSESGPGALADLDCSS-----------------SSQSPGSSENQMVSPG--- 172

Query: 242 QHEEGSLQEAAEAAECSHQPVGAEARVC-ADHTLED---ISAHPSAASPQPGCQGLAHEL 297
               GS ++A E    S+     + RV  A  TLED     +   A +P    +    E 
Sbjct: 173 -KVSGSPEQAVEENLSSY---SLDRRVTPASETLEDPCRTESQHKAETPHGAEEECKAET 228

Query: 298 PQAVHEGVDHGRLGLPHTVHGQPRGH-RIQGHHLAPLNPSLNSQLSWPLADSSPFPATPT 356
           P    E   HG +  P  V   P G    +    APL       L  P    +P PA  T
Sbjct: 229 PHGAEEECRHGGVCAPAAVATSPPGAIPKEACGGAPLQGLPGEALGCPAGVGTPVPADGT 288

Query: 357 SKVPLSLVGCAHPAQP 372
             +      CAH + P
Sbjct: 289 QTLT-----CAHTSAP 299


>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
           sapiens]
          Length = 944

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 52/196 (26%), Positives = 73/196 (37%), Gaps = 28/196 (14%)

Query: 141 LHLGLRKKRENTEI--TGEGTQAGRVAGCPKAQLQAQESPSPLTPSGGPGSAEERGLGGL 198
           LH GLR++++       G G + GR       ++  Q   +    +G PG       GG 
Sbjct: 681 LHRGLRRRQKELRHHGRGRGRRGGRRGRAVGLEVPLQVGVAHEDLAGLPGLGGRGRGGGT 740

Query: 199 RGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSLWQQH-----EEGSLQEAAE 253
           RG         GG  VR L    VG  G G G  +     L + H     + G+L+EA  
Sbjct: 741 RG---------GGGAVRALVQQQVGGVGEGLGAERAAEGPLARVHALVLPQVGALREALP 791

Query: 254 AAECSHQPV-GAEARVC--ADHTLEDISA-HPSAASPQPGC--------QGLAHELPQAV 301
           A      P+ G    V   A   LE + A      + +P C        +     L Q+ 
Sbjct: 792 ADSTGVGPLAGVHVAVAPQAGRVLEGLGAVRARMKARRPVCTLRWICSREERLKALGQSG 851

Query: 302 HEGVDHGRLGLPHTVH 317
           H   D  R  LPH+ H
Sbjct: 852 HWSRDDHRNDLPHSPH 867


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 67/244 (27%), Positives = 85/244 (34%), Gaps = 35/244 (14%)

Query: 160 QAGRVAGCPKAQLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRA 219
           Q G + G   AQL+           G PG   E  LGGL G    R GW  GR +   R 
Sbjct: 463 QHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEE-LGGLLGC---RTGWAAGRTLAGPRV 518

Query: 220 SC-----------VGPRGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEARV 268
                         G RG  CG  + G                A+A     +P GA  R 
Sbjct: 519 RLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGR- 577

Query: 269 CADHTLEDISAHPSAASPQPGCQGLAHEL--PQAVHEGVDHGRLGLPHTVHGQPRGHRIQ 326
                L+D     S A   PG   L  +L  P+A+ EG+     G P  + G   G   +
Sbjct: 578 -----LQD-PWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGP--LGGAGGGGSGE 629

Query: 327 GHHLAPLNPSLNSQLSWPLADSSPFPATPTSKVP---LSLVGCAHPAQPLLYPLHFPSTW 383
           G    P      S++S   +  +P      S  P    S      P  P   PLH  ST 
Sbjct: 630 GQGRGP-----GSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAP-PLHMVSTD 683

Query: 384 GCSS 387
           GCS+
Sbjct: 684 GCSA 687


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 67/244 (27%), Positives = 85/244 (34%), Gaps = 35/244 (14%)

Query: 160 QAGRVAGCPKAQLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRA 219
           Q G + G   AQL+           G PG   E  LGGL G    R GW  GR +   R 
Sbjct: 463 QHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEE-LGGLLGC---RTGWAAGRTLAGPRV 518

Query: 220 SC-----------VGPRGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEARV 268
                         G RG  CG  + G                A+A     +P GA  R 
Sbjct: 519 RLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGR- 577

Query: 269 CADHTLEDISAHPSAASPQPGCQGLAHEL--PQAVHEGVDHGRLGLPHTVHGQPRGHRIQ 326
                L+D     S A   PG   L  +L  P+A+ EG+     G P  + G   G   +
Sbjct: 578 -----LQD-PWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGP--LGGAGGGGSGE 629

Query: 327 GHHLAPLNPSLNSQLSWPLADSSPFPATPTSKVP---LSLVGCAHPAQPLLYPLHFPSTW 383
           G    P      S++S   +  +P      S  P    S      P  P   PLH  ST 
Sbjct: 630 GQGRGP-----GSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAP-PLHMVSTD 683

Query: 384 GCSS 387
           GCS+
Sbjct: 684 GCSA 687


>gi|38569471 MUF1 protein [Homo sapiens]
          Length = 812

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 34/138 (24%), Positives = 46/138 (33%), Gaps = 11/138 (7%)

Query: 223 GPRGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEARVCADHTLEDISAHPS 282
           GP GP C  C   S       +EGSL         S +P    A  CA   +   S   S
Sbjct: 257 GPGGPPCRLCGEASRGRAPSRDEGSLLLG------SRRPRRDAAERCAAALM--ASRRKS 308

Query: 283 AASPQPGCQGLAHELPQAVHEGVDHGRLGLPHTVHGQPRGHRIQGHHLAPLNPSLNSQLS 342
            A   P          ++  E +  G   L   +H     H   G   +P  P+  S  S
Sbjct: 309 EAKQMPRAAPATRVTRRSTQESLTAGGTDLKRELHPPATSHEAPGTKRSPSAPAATSSAS 368

Query: 343 WPLADSSPFPATPTSKVP 360
              + +S +   P S  P
Sbjct: 369 ---SSTSSYKRAPASSAP 383


>gi|50843827 activating molecule in beclin-1-regulated autophagy [Homo
            sapiens]
          Length = 1208

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 11/157 (7%)

Query: 143  LGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQ-ESPSPLTPSGGPGSAE--ERGLGGLR 199
            +GL+ +   T +T +GTQ   +     A+ Q + E P P T + GPG  E  E G  G  
Sbjct: 998  IGLQPRNPATSVTSQGTQTLALQ-LQNAETQTEREVPEPGTAASGPGEGEGSEYGASGED 1056

Query: 200  GL-ECSRLGWGGGRCVRVLR--ASCVGPRGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAE 256
             L    RL   GG    V R  ++ +   G G G+  + S  + +  + G+  E   A  
Sbjct: 1057 ALSRIQRLMAEGGMTAVVQREQSTTMASMG-GFGNNIIVSHRIHRSSQTGT--EPGAAHT 1113

Query: 257  CSHQPVGAEARVCADHTLEDISAHPSAAS-PQPGCQG 292
             S QP  +   +     L +    P  AS  QPG  G
Sbjct: 1114 SSPQPSTSRGLLPEAGQLAERGLSPRTASWDQPGTPG 1150


>gi|222080092 WD repeat domain 91 [Homo sapiens]
          Length = 747

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 40/166 (24%), Positives = 63/166 (37%), Gaps = 30/166 (18%)

Query: 159 TQAGRVAGCPKAQLQAQESPSPLTPSGGP----GSAEERGLGGLRGLECSRLGWGGGRCV 214
           +Q+ RV        Q+++SPS L+P+ GP     SA++   GG +G +      G     
Sbjct: 254 SQSPRVGFLSSLLPQSKKSPSRLSPAQGPPQPQSSAKKESFGG-QGTKGKDPTSGAKDGK 312

Query: 215 RVLRASCVGPRGPGCGHCQVGSSSLWQQHEEGSLQE------------AAEAAECSHQPV 262
            +L     G  G             W QH +  LQ+             ++ AE   +  
Sbjct: 313 SLLSGLATGESG-------------WSQHRQRRLQDHGKERKELFSTTTSQCAEKKPEAS 359

Query: 263 GAEARVCADHTLEDISAHPSAASPQPGCQGLAHELPQAVHEGVDHG 308
           G EA  C +   E +     A+S  P   G+  E P  V    ++G
Sbjct: 360 GPEAEPCPELHTEPVEPLTRASSAGPEGGGVRPEQPFIVLGQEEYG 405


>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
          Length = 4391

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 207 GWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVGAEA 266
           G+ G RC          P  PG G C+  +  + +  E GS+  + EA  C +  VG   
Sbjct: 845 GYTGRRCESCAPGYEGNPIQPG-GKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLC 903

Query: 267 RVCADHTLEDISAHPSAASPQPGC 290
             CAD      S H S  +P  GC
Sbjct: 904 NECADG-----SFHLSTRNPD-GC 921


>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
           [Homo sapiens]
          Length = 994

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 180 PLTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSL 239
           P +  GG G     G GG RG      G GGGR          G RG   GH +     +
Sbjct: 15  PRSSGGGYGGGPAGGHGGNRGSGGGGGGGGGGR----------GGRGRHPGHLKGREIGM 64

Query: 240 WQQHEEGSLQEAAEAAE 256
           W   ++G   + AE  E
Sbjct: 65  WYAKKQGQKNKEAERQE 81


>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
           [Homo sapiens]
          Length = 1008

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 180 PLTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGPGCGHCQVGSSSL 239
           P +  GG G     G GG RG      G GGGR          G RG   GH +     +
Sbjct: 15  PRSSGGGYGGGPAGGHGGNRGSGGGGGGGGGGR----------GGRGRHPGHLKGREIGM 64

Query: 240 WQQHEEGSLQEAAEAAE 256
           W   ++G   + AE  E
Sbjct: 65  WYAKKQGQKNKEAERQE 81


>gi|20270245 GLI-Kruppel family member GLI4 [Homo sapiens]
          Length = 376

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 10/93 (10%)

Query: 274 LEDISAHPSAASP----QPGCQGLAHELPQAVHEGVDHGRLGLPHTVHGQPRGHRIQGHH 329
           L DI   PS  SP     PG  G  H  PQ    G  HG  G    V  QP    +Q   
Sbjct: 4   LGDIQESPSVPSPVSLSSPGTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDLQDVE 63

Query: 330 LAPLNPSLNSQLSWPLADSSP--FPATPTSKVP 360
                  +     WP ++  P   P +P S+ P
Sbjct: 64  ----EVEIGRDTFWPDSEPKPEQAPRSPGSQAP 92


>gi|155723000 mixed lineage kinase 4 [Homo sapiens]
          Length = 1036

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 21/61 (34%), Positives = 30/61 (49%)

Query: 4   RVVHQACPQGGPVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEPEFL 63
           R +H+A     P+P+++  K EG    A      A+ P  L +T GEA+ P S P    L
Sbjct: 740 RELHKAQAAEEPLPKEEKKKREGIFQRASKSRRSASPPTSLPSTCGEASSPPSLPLSSAL 799

Query: 64  G 64
           G
Sbjct: 800 G 800


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 30/84 (35%), Positives = 35/84 (41%), Gaps = 13/84 (15%)

Query: 175 QESPSPLTPSG--GPGSAE-----ERGLGGLRGLECSRLGWGGGRCVRVLRASCVGPRGP 227
           Q  PSP  P    GPG+       ER LGGL G E +   WG  R     + +  GP   
Sbjct: 234 QPEPSPWAPCLLLGPGNLGGLLHWERLLGGLGGEEDTGRPWGPSRGPPQAQGTSSGP--- 290

Query: 228 GCGHCQVGSSSLWQQHEEGSLQEA 251
              +C  GSSS     E G   EA
Sbjct: 291 ---NCAPGSSSSSSSDEAGDPNEA 311


>gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo
           sapiens]
          Length = 582

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 156 GEGTQAGRVAGCPKAQLQAQESPSPLTPSGGPGSAE-ERGLGGLRGLECSRLGWGGGRCV 214
           G G Q G+  GCP   L     P    P G P S E E G    +  +    G       
Sbjct: 141 GHGEQQGQCPGCPTGHLHPAR-PLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQ 199

Query: 215 RVLRASCVGP-RGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVG 263
           R      + P    G GHCQ G     QQ   G +++       +H P G
Sbjct: 200 RPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGG----THPPAG 245


>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 121 RASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSP 180
           R S P   TGGS    CSGP        +  T        A   AG P A   A+    P
Sbjct: 295 RLSPPRADTGGSSSGGCSGP------DSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGP 348

Query: 181 LTPSGGPGSAEERGLGGLRGLECSRLG 207
               G P   +E     +   EC R G
Sbjct: 349 GPAQGPPSRRDEPRRVVIAARECGREG 375


>gi|239753382 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 331

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)

Query: 15  PVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEPEFLGTAACTQSGAS 74
           P    Q   + GH S       L T   HL  T   +  P +RP+   +  AAC Q+   
Sbjct: 38  PCDVDQCFPSPGHFSNQCSLSPLFTCNVHLHNTLPGSCAPMARPDSRGVPEAACAQA--- 94

Query: 75  LLRAESPQL----------------FQLQPGQGHLQIECAG 99
             R  SP+L                 QL+PG G +Q  C G
Sbjct: 95  --RGGSPKLPEQPCRGRGACWRLGGRQLRPGGGKVQSSCQG 133


>gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo
           sapiens]
          Length = 589

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 156 GEGTQAGRVAGCPKAQLQAQESPSPLTPSGGPGSAE-ERGLGGLRGLECSRLGWGGGRCV 214
           G G Q G+  GCP   L     P    P G P S E E G    +  +    G       
Sbjct: 148 GHGEQQGQCPGCPTGHLHPAR-PLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQ 206

Query: 215 RVLRASCVGP-RGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVG 263
           R      + P    G GHCQ G     QQ   G +++       +H P G
Sbjct: 207 RPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGG----THPPAG 252


>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 121 RASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSP 180
           R S P   TGGS    CSGP        +  T        A   AG P A   A+    P
Sbjct: 295 RLSPPRADTGGSSSGGCSGP------DSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGP 348

Query: 181 LTPSGGPGSAEERGLGGLRGLECSRLG 207
               G P   +E     +   EC R G
Sbjct: 349 GPAQGPPSRRDEPRRVVIAARECGREG 375


>gi|239747949 PREDICTED: hypothetical protein XP_002346484 [Homo
           sapiens]
          Length = 331

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)

Query: 15  PVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEPEFLGTAACTQSGAS 74
           P    Q   + GH S       L T   HL  T   +  P +RP+   +  AAC Q+   
Sbjct: 38  PCDVDQCFPSPGHFSNQCSLSPLFTCNVHLHNTLPGSCAPMARPDSRGVPEAACAQA--- 94

Query: 75  LLRAESPQL----------------FQLQPGQGHLQIECAG 99
             R  SP+L                 QL+PG G +Q  C G
Sbjct: 95  --RGGSPKLPEQPCRGRGACWRLGGRQLRPGGGKVQSSCQG 133


>gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo
           sapiens]
          Length = 329

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 156 GEGTQAGRVAGCPKAQLQAQESPSPLTPSGGPGSAE-ERGLGGLRGLECSRLGWGGGRCV 214
           G G Q G+  GCP   L     P    P G P S E E G    +  +    G       
Sbjct: 148 GHGEQQGQCPGCPTGHLHPAR-PLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQ 206

Query: 215 RVLRASCVGP-RGPGCGHCQVGSSSLWQQHEEGSLQEAAEAAECSHQPVG 263
           R      + P    G GHCQ G     QQ   G +++       +H P G
Sbjct: 207 RPTAHCTIRPVASTGNGHCQDGQRQTAQQIRHGQVEQPGG----THPPAG 252


>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 121 RASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSP 180
           R S P   TGGS    CSGP        +  T        A   AG P A   A+    P
Sbjct: 295 RLSPPRADTGGSSSGGCSGP------DSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGP 348

Query: 181 LTPSGGPGSAEERGLGGLRGLECSRLG 207
               G P   +E     +   EC R G
Sbjct: 349 GPAQGPPSRRDEPRRVVIAARECGREG 375


>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
           sapiens]
          Length = 756

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 46/151 (30%), Positives = 56/151 (37%), Gaps = 24/151 (15%)

Query: 122 ASVPGPFTGGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPSPL 181
           +S+ G   GGSG  R   P         E      EG   GR    P+           L
Sbjct: 596 SSLSGGPGGGSGVGRWQLPGRAAAEDVAEAAAKVLEGAGPGR----PRR--------GQL 643

Query: 182 TPSGGPGSAEERGLGG-LRGLECSRLGWGGGRCVRVL---RASCVGPRGPGCGHCQVGSS 237
             + G G A   G G  LRG     LGWG   CV V+   R      R   C  C   +S
Sbjct: 644 LRAAGLGQARGGGAGAWLRGR--LGLGWGPTACVPVVAARRPDTSSARSGACCGCSRANS 701

Query: 238 SLWQQHEEGSLQEAAEA--AECSHQPVGAEA 266
             W+     S + AA A  ++ S QP GA A
Sbjct: 702 QYWR----ASSRAAATACNSQNSLQPRGAAA 728


>gi|239741844 PREDICTED: hypothetical protein XP_002342324 [Homo
           sapiens]
          Length = 331

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)

Query: 15  PVPEKQMHKAEGHRSWAFLCGSLATAPQHLRATAGEANEPCSRPEPEFLGTAACTQSGAS 74
           P    Q   + GH S       L T   HL  T   +  P +RP+   +  AAC Q+   
Sbjct: 38  PCDVDQCFPSPGHFSNQCSLSPLFTCNVHLHNTLPGSCAPMARPDSRGVPEAACAQA--- 94

Query: 75  LLRAESPQL----------------FQLQPGQGHLQIECAG 99
             R  SP+L                 QL+PG G +Q  C G
Sbjct: 95  --RGGSPKLPEQPCRGRGACWRLGGRQLRPGGGKVQSSCQG 133


>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
          Length = 1604

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 167 CPKAQLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRV---LRASCV- 222
           CP     A++S   L PSG  G   ERGL G  G +  + G  G  CVR+       C  
Sbjct: 316 CPPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEK-GARGNDCVRISPDAPLQCAE 374

Query: 223 GPRGPGCGHCQVGSSSL 239
           GP+G       +G S L
Sbjct: 375 GPKGEKGESGALGPSGL 391



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 31/112 (27%)

Query: 130 GGSGESRCSGPLHLGLRKKRENTEITGEGTQAGRVAGCPKAQLQAQESPS-------PLT 182
           GG GE    GP            E    G    R++  P A LQ  E P         L 
Sbjct: 337 GGKGERGLPGP-------PGSKGEKGARGNDCVRIS--PDAPLQCAEGPKGEKGESGALG 387

Query: 183 PSGGPGSAEERGL------GGLRGL--ECSRLGWGGGRCVRVLRASCVGPRG 226
           PSG PGS  E+G       GG++G+  +  R G  G  CV       +GP+G
Sbjct: 388 PSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICV-------IGPKG 432


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,262,251
Number of Sequences: 37866
Number of extensions: 1230973
Number of successful extensions: 5302
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 4929
Number of HSP's gapped (non-prelim): 471
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.