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Search of human proteins with 239747139
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747139 PREDICTED: hypothetical protein XP_002343922 [Homo
sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747139 PREDICTED: hypothetical protein XP_002343922 [Homo ... 365 e-102
gi|113410972 PREDICTED: hypothetical protein [Homo sapiens] 355 1e-98
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 44 1e-04
gi|52426743 cisplatin resistance-associated overexpressed protei... 35 0.036
gi|19923485 cisplatin resistance-associated overexpressed protei... 35 0.036
gi|62122917 filaggrin family member 2 [Homo sapiens] 34 0.079
gi|148746195 trichohyalin [Homo sapiens] 34 0.079
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 33 0.18
gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] 32 0.23
gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens] 32 0.23
gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens] 32 0.23
gi|225579067 solute carrier family 12, member 4 isoform e [Homo ... 32 0.23
gi|225579065 solute carrier family 12, member 4 isoform d [Homo ... 32 0.23
gi|225579063 solute carrier family 12, member 4 isoform c [Homo ... 32 0.23
gi|4827006 solute carrier family 12, member 4 isoform a [Homo sa... 32 0.23
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 32 0.30
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 32 0.30
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 32 0.30
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 32 0.30
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 32 0.39
gi|9558733 transformer-2 alpha [Homo sapiens] 32 0.39
gi|108860697 zinc finger protein 592 [Homo sapiens] 31 0.51
gi|17978469 cyclin T2 isoform b [Homo sapiens] 30 0.88
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 30 0.88
gi|225579061 solute carrier family 12, member 4 isoform b [Homo ... 30 1.1
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 30 1.5
gi|87196343 PDZ domain containing 2 [Homo sapiens] 30 1.5
gi|155030185 hypothetical protein LOC55726 [Homo sapiens] 30 1.5
gi|189095241 potassium voltage-gated channel, Isk-related family... 29 2.6
gi|189095239 potassium voltage-gated channel, Isk-related family... 29 2.6
>gi|239747139 PREDICTED: hypothetical protein XP_002343922 [Homo
sapiens]
Length = 182
Score = 365 bits (938), Expect = e-102
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKH 60
MNVLESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKH
Sbjct: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKH 60
Query: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYV 120
SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYV
Sbjct: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYV 120
Query: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHSDPHSSVL 180
SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHSDPHSSVL
Sbjct: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHSDPHSSVL 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|113410972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 355 bits (911), Expect = 1e-98
Identities = 176/182 (96%), Positives = 179/182 (98%)
Query: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKH 60
MNVLESYVRDKHSDHGRSVLESYVRNKHS+HSRSVLESY YKHSDPHSSVLESYVREKH
Sbjct: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKH 60
Query: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYV 120
SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESH+RVKHSDPRSSVLEFYV
Sbjct: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYV 120
Query: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHSDPHSSVL 180
SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSIN+LESYVRDIHSDP SSVL
Sbjct: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHSDPRSSVL 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 43.5 bits (101), Expect = 1e-04
Identities = 44/143 (30%), Positives = 58/143 (40%), Gaps = 23/143 (16%)
Query: 17 RSVLESYVRNKHSEHSRSVLESYRRYKHSDPHS-------------SVLESYVREKHSEH 63
RSV S+ R++ SRS SYR +S S S SY + S
Sbjct: 1330 RSVSYSHSRSR----SRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRTSSR 1385
Query: 64 SRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDK 123
SRS SY D HS R+ ++Y RS +S+ R + + RS Y SD
Sbjct: 1386 SRSRSSSY--DPHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRSRSCRSYGSDS 1443
Query: 124 HSDSSSSVLYSYEKDKHSESRSS 146
SD S YS+ + SR S
Sbjct: 1444 ESDRS----YSHHRSPSESSRYS 1462
Score = 37.4 bits (85), Expect = 0.007
Identities = 41/143 (28%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 32 SRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDR 91
SRS S + + H + SY + SRS+ SY +S R+ + R R
Sbjct: 1311 SRSPSRSRSKSETKSRHRTRSVSYSHSR--SRSRSSTSSYRSRSYSRSRSRGWYSRGRTR 1368
Query: 92 HLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSY 151
+SH S RSS D HS S S SY S SRS SY
Sbjct: 1369 SRSSSYRSYKSHRTSSRSRSRSSSY-----DPHSRSRSYTYDSYYSRSRSRSRSQRSDSY 1423
Query: 152 VKGKHTDPSINILESYVRDIHSD 174
+G+ + SY D SD
Sbjct: 1424 HRGRSYNRRSRSCRSYGSDSESD 1446
Score = 34.3 bits (77), Expect = 0.061
Identities = 46/152 (30%), Positives = 61/152 (40%), Gaps = 41/152 (26%)
Query: 11 KHSDHGRSVLESYVRNKHSEHSRSVLESYRRYK-----HSDPHSSVLESYVREKHSEHSR 65
K+SD RS S S SRS SY R + HS S S+ R K+S+HS+
Sbjct: 680 KYSD--RSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQ 737
Query: 66 -SALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKH 124
S SY + R + R++ S ++SV KH
Sbjct: 738 CSRSSSYTSISSDDGR--------------------RAKRRLRSSGKKNSVSH----KKH 773
Query: 125 SDSSSSVLYS-YEKD--------KHSESRSSV 147
S SS L+S Y K K+SESRSS+
Sbjct: 774 SSSSEKTLHSKYVKGRDRSSCVRKYSESRSSL 805
Score = 31.6 bits (70), Expect = 0.39
Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 5/147 (3%)
Query: 14 DHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVR 73
D +S S R+K SR S Y HS S S R + +SRS +
Sbjct: 1307 DDSQSRSPSRSRSKSETKSRHRTRSVS-YSHSRSRSRSSTSSYRSR--SYSRSRSRGWYS 1363
Query: 74 DKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLY 133
+ R+ +Y R S S+ HS RS + Y S S S S
Sbjct: 1364 RGRTRSRSSSYRSYKSHRTSSRSRSRSSSY--DPHSRSRSYTYDSYYSRSRSRSRSQRSD 1421
Query: 134 SYEKDKHSESRSSVLKSYVKGKHTDPS 160
SY + + RS +SY +D S
Sbjct: 1422 SYHRGRSYNRRSRSCRSYGSDSESDRS 1448
Score = 28.5 bits (62), Expect = 3.3
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 16/87 (18%)
Query: 103 HLRVKHSDPRSSVLEFYVSDKHSDSS------SSVLYSYEKD---------KHSESRSSV 147
H R K+S+ S Y SD+ S+SS SS SY + HS SRS
Sbjct: 665 HKREKNSESDQSTYSKY-SDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPS 723
Query: 148 LKSYVKGKHTDPSINILESYVRDIHSD 174
+S+ + K++D S S I SD
Sbjct: 724 SRSHSRNKYSDHSQCSRSSSYTSISSD 750
Score = 26.9 bits (58), Expect = 9.7
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 83 VLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSY-----EK 137
+ E + HL P S S +K + SS ++ +K+S+S S Y E
Sbjct: 633 IQEMKAKTTHLLPIQSTY-SLANIKETGSSSS---YHKREKNSESDQSTYSKYSDRSSES 688
Query: 138 DKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHSDPHS 177
S SRSS +SY + S+ S R S HS
Sbjct: 689 SPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHS 728
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 35.0 bits (79), Expect = 0.036
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 19/133 (14%)
Query: 26 NKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLE 85
++ +H RS RR + D S KH SR S RD+ S
Sbjct: 309 SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKH----R 364
Query: 86 TYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
+ RDR D +S K + R S DK S S +D ++ES+
Sbjct: 365 SKSRDREQDRKS---------KEKEKRGS------DDKKSSVKSGSREKQSEDTNTESKE 409
Query: 146 SVLKSYVKGKHTD 158
S K+ V G D
Sbjct: 410 SDTKNEVNGTSED 422
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 35.0 bits (79), Expect = 0.036
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 19/133 (14%)
Query: 26 NKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLE 85
++ +H RS RR + D S KH SR S RD+ S
Sbjct: 309 SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKH----R 364
Query: 86 TYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
+ RDR D +S K + R S DK S S +D ++ES+
Sbjct: 365 SKSRDREQDRKS---------KEKEKRGS------DDKKSSVKSGSREKQSEDTNTESKE 409
Query: 146 SVLKSYVKGKHTD 158
S K+ V G D
Sbjct: 410 SDTKNEVNGTSED 422
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 33.9 bits (76), Expect = 0.079
Identities = 36/141 (25%), Positives = 54/141 (38%), Gaps = 7/141 (4%)
Query: 5 ESYVRDKHS-DHGRSVLESYVRNKHSEHSRSVLESYR---RYKHSDPHSSVLESYVREKH 60
ES + D+H HG++ R+ +S H ++ R R + S S+ E + H
Sbjct: 1533 ESIIHDRHRITHGQT--GDTTRHSYSGHEQTTQTGSRTTGRQRTSHSESTDSEVHSGGSH 1590
Query: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYV 120
HSR +H EP V E + H + SH S R S
Sbjct: 1591 RPHSREHTYGQAGSQHEEPEFTVHERH-GTTHGQIGDTTGHSHSGHGQSTQRGSRTTGRQ 1649
Query: 121 SDKHSDSSSSVLYSYEKDKHS 141
HS+SS S ++S H+
Sbjct: 1650 RSSHSESSDSEVHSGVSHTHT 1670
Score = 32.7 bits (73), Expect = 0.18
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 25 RNKHSEHSRSVLESYR-----RYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEP 79
R+ HS H +S R R+ HSD S + S V H HS+ S +H E
Sbjct: 1323 RHGHSGHGQSTQTGSRTSGRQRFSHSDATDSEVHSGV--SHRPHSQEQTHSQAGSQHGES 1380
Query: 80 RNIVLETYVRDRHLDPRSSVLES----HLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYS 134
E+ V +RH E+ H S R S HS+SS S ++S
Sbjct: 1381 -----ESTVHERHETTYGQTGEATGHGHSGHGQSTQRGSRTTGRRGSGHSESSDSEVHS 1434
Score = 30.0 bits (66), Expect = 1.1
Identities = 37/171 (21%), Positives = 56/171 (32%), Gaps = 26/171 (15%)
Query: 12 HSDHGRSVLESYVRNKHSEH-----------SRSVLESYRRYKHSDPHSSVLESYVREKH 60
HS+ S + S + HS H S S++ R H + SY +
Sbjct: 1501 HSESSDSEVHSGGSHTHSGHTHGQSGSQHGESESIIHDRHRITHGQTGDTTRHSYSGHEQ 1560
Query: 61 SEHSRSALESYVRDKHSEPRNIVL------------ETY--VRDRHLDPRSSVLESHLRV 106
+ + S R HSE + + TY +H +P +V E H
Sbjct: 1561 TTQTGSRTTGRQRTSHSESTDSEVHSGGSHRPHSREHTYGQAGSQHEEPEFTVHERH-GT 1619
Query: 107 KHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT 157
H + + S S ++ HSES S + S V HT
Sbjct: 1620 THGQIGDTTGHSHSGHGQSTQRGSRTTGRQRSSHSESSDSEVHSGVSHTHT 1670
Score = 29.3 bits (64), Expect = 2.0
Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 11 KHSDHGRSV---LESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSA 67
+ + HG+++ S S + S + RR S+ S + S V +HSEH +
Sbjct: 1236 QETTHGQTINTTRHSQSGQGQSTQTGSRVTRRRRSSQSENSDSEVHSKVSHRHSEHIHTQ 1295
Query: 68 LESYVRDKHSEPRNIVLETY------VRDRHLDPRSSV-----LESHLRVKHSDPRSSVL 116
S+ S R T+ R H S R HSD S +
Sbjct: 1296 AGSHYPKSGSTVRRRQGTTHGQRGDTTRHGHSGHGQSTQTGSRTSGRQRFSHSDATDSEV 1355
Query: 117 EFYVSDKHSDSSSSVLYSYEKDKHSESRSSV 147
VS H S +S +H ES S+V
Sbjct: 1356 HSGVS--HRPHSQEQTHSQAGSQHGESESTV 1384
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 33.9 bits (76), Expect = 0.079
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 10/153 (6%)
Query: 21 ESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPR 80
E +R + + R LE R+Y+ + E +RE+ + R LE R++ +
Sbjct: 1121 EQLLREEREKRRRQELE--RQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQ 1178
Query: 81 NIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKH 140
E + + R E R + R + Y + D S + + +E +K
Sbjct: 1179 E---EEQLLREEQEKRRQERERQYREEEELQRQKRKQRY---RDEDQRSDLKWQWEPEKE 1232
Query: 141 SESRSSVLKSYVKGKHTDPSINILESYVRDIHS 173
+ R + K Y KG+ + + +S +RD S
Sbjct: 1233 NAVRDN--KVYCKGRENEQFRQLEDSQLRDRQS 1263
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 32.7 bits (73), Expect = 0.18
Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 30 EHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVR 89
E SRS + R + S SS +Y R+K SRS S+ RD +PR+ + R
Sbjct: 10 EESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRD--LQPRSHSYDR--R 65
Query: 90 DRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLK 149
RH SS S + S R + V S S + S + S SRSS
Sbjct: 66 RRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPR-LRSHSRSSERS 124
Query: 150 SY 151
S+
Sbjct: 125 SH 126
>gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]
Length = 1260
Score = 32.3 bits (72), Expect = 0.23
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 4 LESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEH 63
L+ YV D+ S + +RNK + + + E + Y+ +D + V ESY ++ +
Sbjct: 886 LKKYVTDRKSAEQNESKINKLRNKVNWKTEIISEMNQIYEDNDKDAHVQESYTKDLDFKV 945
Query: 64 SRSALESYVRDKHSEPRNIVLETY--VRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVS 121
++S + E ++I+ + Y V + +L+S+ VK SS +
Sbjct: 946 NKS-------KQKLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNIL 998
Query: 122 DKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDP 159
K + +S L E + S S S LK +DP
Sbjct: 999 TKAKNKLASQL--TESSQTSISLESDLKHITSEADSDP 1034
>gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens]
Length = 1265
Score = 32.3 bits (72), Expect = 0.23
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 4 LESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEH 63
L+ YV D+ S + +RNK + + + E + Y+ +D + V ESY ++ +
Sbjct: 886 LKKYVTDRKSAEQNESKINKLRNKVNWKTEIISEMNQIYEDNDKDAHVQESYTKDLDFKV 945
Query: 64 SRSALESYVRDKHSEPRNIVLETY--VRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVS 121
++S + E ++I+ + Y V + +L+S+ VK SS +
Sbjct: 946 NKS-------KQKLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNIL 998
Query: 122 DKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDP 159
K + +S L E + S S S LK +DP
Sbjct: 999 TKAKNKLASQL--TESSQTSISLESDLKHITSEADSDP 1034
>gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens]
Length = 1261
Score = 32.3 bits (72), Expect = 0.23
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 4 LESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEH 63
L+ YV D+ S + +RNK + + + E + Y+ +D + V ESY ++ +
Sbjct: 886 LKKYVTDRKSAEQNESKINKLRNKVNWKTEIISEMNQIYEDNDKDAHVQESYTKDLDFKV 945
Query: 64 SRSALESYVRDKHSEPRNIVLETY--VRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVS 121
++S + E ++I+ + Y V + +L+S+ VK SS +
Sbjct: 946 NKS-------KQKLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNIL 998
Query: 122 DKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDP 159
K + +S L E + S S S LK +DP
Sbjct: 999 TKAKNKLASQL--TESSQTSISLESDLKHITSEADSDP 1034
>gi|225579067 solute carrier family 12, member 4 isoform e [Homo
sapiens]
Length = 1054
Score = 32.3 bits (72), Expect = 0.23
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 870 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 924
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINILESYVRDIHSDPHSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 925 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 983
>gi|225579065 solute carrier family 12, member 4 isoform d [Homo
sapiens]
Length = 1079
Score = 32.3 bits (72), Expect = 0.23
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 895 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 949
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINILESYVRDIHSDPHSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 950 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1008
>gi|225579063 solute carrier family 12, member 4 isoform c [Homo
sapiens]
Length = 1087
Score = 32.3 bits (72), Expect = 0.23
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 903 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 957
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINILESYVRDIHSDPHSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 958 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1016
>gi|4827006 solute carrier family 12, member 4 isoform a [Homo
sapiens]
Length = 1085
Score = 32.3 bits (72), Expect = 0.23
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 901 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 955
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINILESYVRDIHSDPHSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 956 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1014
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 32.0 bits (71), Expect = 0.30
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 21 ESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPR 80
E R KH E R E +H D H+ L + R++ H R + RDK S PR
Sbjct: 1458 EKKKREKHREKWRDEKE-----RHRDRHADGLLRHHRDELLRHHRDEQKPATRDKDSPPR 1512
Query: 81 NIVLETYVRDRHLDPRSSVLESHLRVKHSD 110
++D+ D + ++ L+ K D
Sbjct: 1513 ------VLKDKSRDEGPRLGDAKLKEKFKD 1536
Score = 27.7 bits (60), Expect = 5.7
Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 22/157 (14%)
Query: 9 RDKHSDHGRS---VLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVR-EKHSEHS 64
++K SD +S +LE ++K + + + KH D H E ++ E
Sbjct: 1029 KEKSSDKDKSEKSILEKCQKDKEFDKCFKEKKDTKE-KHKDTHGKDKERKASLDQGKEKK 1087
Query: 65 RSALESYVR--------DKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSD--PRSS 114
A + DK + ++ + D D R S + S ++ + PR+
Sbjct: 1088 EKAFPGIISEDFSEKKDDKKGKEKSWYIADIFTDESEDDRDSCMGSGFKMGEASDLPRTD 1147
Query: 115 VL-------EFYVSDKHSDSSSSVLYSYEKDKHSESR 144
L E Y SD+H SS +KDK R
Sbjct: 1148 GLQEKEEGREAYASDRHRKSSDKQHPERQKDKEPRDR 1184
Score = 26.9 bits (58), Expect = 9.7
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 53 ESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPR 112
E+Y ++H + S + R K EPR+ + D D + V E H K D
Sbjct: 1157 EAYASDRHRKSSDK--QHPERQKDKEPRDRRKDRGAADAGRDKKEKVFEKHKEKK--DKE 1212
Query: 113 SSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPS 160
S+ D+ S S+ + +K + + K KH + S
Sbjct: 1213 STEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKS 1260
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 32.0 bits (71), Expect = 0.30
Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 13 SDHGRSVLESYVRNKHSEHSRSVLE---SYRRYKHSDPHSSVLESYVREKHSEHSR-SAL 68
++ V E +NKHS H + + ++++KHS + + KH +H R +
Sbjct: 25 NEENGEVSEDQSQNKHSRHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKHKHKKHKRKEII 84
Query: 69 ESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHL-----RVKHSDPRSSVLEFYVSDK 123
++ ++ S + L+ L+ + +++++ L K +L+ Y S
Sbjct: 85 DASDKEGMSPAKRTKLDDLALLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGS 144
Query: 124 HSDSSSSVLYSYEKDKHSESRSSVLKSYVKGK 155
+ +EK ++ +RSS S KGK
Sbjct: 145 EEEGE-----IHEKARNG-NRSSTRSSSTKGK 170
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 32.0 bits (71), Expect = 0.30
Identities = 43/177 (24%), Positives = 62/177 (35%), Gaps = 24/177 (13%)
Query: 6 SYVRDKHSDHGRSVLESYVRNKHS-------EHSRSVLESYRRYKHSDPHSSVLESYVRE 58
S+ R K RS +S+ R K S H+RS R + PH R
Sbjct: 310 SHTRSK----SRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK------RS 359
Query: 59 KHSEHSRSALESYVRDKHSEPRNIVLE-----TYVRDRHLDPRSSVLESHLRVKHSDPRS 113
K E +S S+ RDK + R + E R++ + + R K+ D
Sbjct: 360 KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDK 419
Query: 114 SVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRD 170
+ DK D +EKD+ E K K + D S I E +D
Sbjct: 420 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKE--KEREKDRSKEIDEKRKKD 474
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 32.0 bits (71), Expect = 0.30
Identities = 43/177 (24%), Positives = 62/177 (35%), Gaps = 24/177 (13%)
Query: 6 SYVRDKHSDHGRSVLESYVRNKHS-------EHSRSVLESYRRYKHSDPHSSVLESYVRE 58
S+ R K RS +S+ R K S H+RS R + PH R
Sbjct: 194 SHTRSK----SRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK------RS 243
Query: 59 KHSEHSRSALESYVRDKHSEPRNIVLE-----TYVRDRHLDPRSSVLESHLRVKHSDPRS 113
K E +S S+ RDK + R + E R++ + + R K+ D
Sbjct: 244 KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDK 303
Query: 114 SVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRD 170
+ DK D +EKD+ E K K + D S I E +D
Sbjct: 304 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKE--KEREKDRSKEIDEKRKKD 358
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 31.6 bits (70), Expect = 0.39
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 25 RNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVL 84
+N HSE R+Y + + H S R S SR+A R ++ +P
Sbjct: 753 KNNHSE---------RKYYYYERHRS------RSLSSNRSRTASTGTDRVRNEKPGG--- 794
Query: 85 ETYVRDRHLDPRSSVLE------SHLRVKHSDPRSSVLEFYV---SDKHSDSSSSVLYSY 135
+ + RHL+ + V + S + H SS L+ SD SDS SS +
Sbjct: 795 KRKYKTRHLEGTNEVAQPSREFASKAKDSHYQKSSSKLDGNYKNESDTFSDSRSSDRETK 854
Query: 136 EKDKHSESRSSVLKSYVKGKHTD 158
K + ++RS ++ +GK TD
Sbjct: 855 HKRRKRKTRSLSVEIVYEGKATD 877
>gi|9558733 transformer-2 alpha [Homo sapiens]
Length = 282
Score = 31.6 bits (70), Expect = 0.39
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 21 ESYVRNKHSEHSRSVLESYRRYKHSDPHS------SVLESYVREKHSEHSRSALESYVRD 74
ES+ R++ SRS S+RRY S HS S SY E SRS R
Sbjct: 47 ESHSRSRSKSRSRSRRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRR 106
Query: 75 KHSEPR 80
+H+ R
Sbjct: 107 RHTGSR 112
>gi|108860697 zinc finger protein 592 [Homo sapiens]
Length = 1267
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 21 ESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPR 80
ESYV + H R++ +RY P +S+ H+ ++L ++R+ H +
Sbjct: 996 ESYVSHMKKSHGRTL----KRY----PCRQCEQSF-------HTPNSLRKHIRNNHDTVK 1040
Query: 81 NIVLETY-VRDRHLDPRSSVLESHLRVKH 108
Y D PR S+LESH+ + H
Sbjct: 1041 KFYTCGYCTEDSPSFPRPSLLESHISLMH 1069
>gi|17978469 cyclin T2 isoform b [Homo sapiens]
Length = 730
Score = 30.4 bits (67), Expect = 0.88
Identities = 42/175 (24%), Positives = 65/175 (37%), Gaps = 28/175 (16%)
Query: 5 ESYVRDKHSDHG----------------RSVLESYVRNKHSEHSRSVLESYRRYKHSDPH 48
E Y+ DK G + L+ ++ SE S E + KHS PH
Sbjct: 492 EKYMADKKEKSGSLKLRIPIPPTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPH 551
Query: 49 SSVLESYVREKHSEH--SRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRV 106
+ +EKH EH SR S+ KHS + + +VL S + +
Sbjct: 552 ---ISRDHKEKHKEHPSSRHHTSSH---KHSHSHSGSSSGGSKHSADGIPPTVLRSPVGL 605
Query: 107 K----HSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT 157
S SS +V+D + S + S + S S SS +K Y+ ++
Sbjct: 606 SSDGISSSSSSSRKRLHVNDASHNHHSKMSKSSKSSGSSSSSSSSVKQYISSHNS 660
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 30.4 bits (67), Expect = 0.88
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 26 NKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLE 85
NKH + ++S E+ ++ ++ LE ++R HSEH + L+ + + + +
Sbjct: 371 NKHDDGTQSDSENAGAHRRCSKRAT-LEEHLRRHHSEHKK--LQKVQATEKHQDQAVTSS 427
Query: 86 TYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
+ R H P +L+ K +P S+ + S S S E DK ++++
Sbjct: 428 AHHRGGHGVPHGKLLKQ----KSEEPSVSIPFLQTALLRSSGSLGHRPSQEMDKMLKNQA 483
Query: 146 SVLKSYVKGKHTDPSINILESYVRDIHSDPHSSVLES 182
+ S K D + +Y ++ +P+S +E+
Sbjct: 484 T---SATSEKDNDDDQSDKGTYTIEL-ENPNSEEVEA 516
Score = 26.9 bits (58), Expect = 9.7
Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 41 RYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRS--- 97
R + DP SS +++ + K +E + LE+ +R+ + +Y RD + P S
Sbjct: 878 RSESLDPDSS-MDTTLILKDTEAVMAFLEAKLREDNKTDEGPDTPSYNRDNSISPESDVD 936
Query: 98 -----SVLESHLRVKHSDPRSSVLEFYVS-------DKHSDSSSSVLYSYEKDKHSESRS 145
S++ K + R S Y K SSS + +K ++SRS
Sbjct: 937 TASTISLVTGETERKSTQKRKSFTSLYKDRCSTGSPSKDVTKSSSSGAREKMEKKTKSRS 996
Query: 146 SVLKSYVKGKH--------TDPSINILESYVRDIHSDPHSSV 179
+ + S G+ PS+++ + S PHS++
Sbjct: 997 TDVGSRADGRKFVQSSGRIRQPSVDLTDD--DQTSSVPHSAI 1036
>gi|225579061 solute carrier family 12, member 4 isoform b [Homo
sapiens]
Length = 1079
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 86 TYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
TY R ++ RS +L K R + L V D+HS LYS E+D+ +
Sbjct: 916 TYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKDRHSALRLESLYSDEEDESAVGAD 972
Query: 146 SVLKSYVKGKHT----DPSINILESYVRDIHSDPHSS 178
+ ++ + K+ DPS + +++ +H P S
Sbjct: 973 KIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1008
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 1.5
Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)
Query: 11 KHSDHGRSVLESYVR--------NKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSE 62
K DH RS S R +K +H RS S R + + + +
Sbjct: 493 KERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPS 552
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSD 122
R +S K + R + R+R SS H R + + +S S
Sbjct: 553 EEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASS 612
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPS 160
K S S S E HS+SR+S K +DPS
Sbjct: 613 KEKAHSRSRTPSKE-GNHSQSRTS-------SKESDPS 642
Score = 27.7 bits (60), Expect = 5.7
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 2/137 (1%)
Query: 10 DKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALE 69
+K D +S S R S S RR++ +S + +HSRS
Sbjct: 540 NKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSP 599
Query: 70 SYVRDKHSEPRNIVLE-TYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYVSDKHSDSS 128
+ + +S PR E + R R + +S K SDP S + K S +
Sbjct: 600 N-KQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTR 658
Query: 129 SSVLYSYEKDKHSESRS 145
+S L + S S
Sbjct: 659 TSSLSQNRTPSKTSSHS 675
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 29.6 bits (65), Expect = 1.5
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 114 SVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHS 173
SVL+ DKH + + L +Y ++ S S S + G T+PS++ + D S
Sbjct: 1502 SVLDSINPDKHFTVNKNFLSNYSRNFSSFHEDSTSLSGL-GDSTEPSLSSMYGDAEDSSS 1560
Query: 174 DPHS 177
DP S
Sbjct: 1561 DPES 1564
>gi|155030185 hypothetical protein LOC55726 [Homo sapiens]
Length = 706
Score = 29.6 bits (65), Expect = 1.5
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 45 SDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY-------VRDRHLDPRS 97
SD H +LE V+E EH++ A S + + +++ TY V DR S
Sbjct: 168 SDSHVRMLEDCVQETIHEHNKLAANSDHLMQIQKCELVLIHTYPVGEDSLVSDRSKKELS 227
Query: 98 SVLESHLRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT 157
VL S + + + + +H D +S+ + + + + +S H
Sbjct: 228 PVLTSEVHSVRAGRHLATKLNILVQQHFDLASTTITNIPMKEEQHANTSANYDVELLHHK 287
Query: 158 DPSINILES 166
D ++ L+S
Sbjct: 288 DAHVDFLKS 296
>gi|189095241 potassium voltage-gated channel, Isk-related family,
member 1 [Homo sapiens]
Length = 129
Score = 28.9 bits (63), Expect = 2.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 51 VLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSS--VLESHLRVK 107
++ SY+R K EHS Y+ + ++ + YV+ R L+ S V+E+HL ++
Sbjct: 61 IMLSYIRSKKLEHSNDPFNVYIESDAWQEKD---KAYVQARVLESYRSCYVVENHLAIE 116
Score = 26.9 bits (58), Expect = 9.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 19 VLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKH 76
++ SY+R+K EHS + + Y SD ++YV+ + E RS YV + H
Sbjct: 61 IMLSYIRSKKLEHSN---DPFNVYIESDAWQEKDKAYVQARVLESYRSC---YVVENH 112
>gi|189095239 potassium voltage-gated channel, Isk-related family,
member 1 [Homo sapiens]
Length = 129
Score = 28.9 bits (63), Expect = 2.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 51 VLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSS--VLESHLRVK 107
++ SY+R K EHS Y+ + ++ + YV+ R L+ S V+E+HL ++
Sbjct: 61 IMLSYIRSKKLEHSNDPFNVYIESDAWQEKD---KAYVQARVLESYRSCYVVENHLAIE 116
Score = 26.9 bits (58), Expect = 9.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 19 VLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKH 76
++ SY+R+K EHS + + Y SD ++YV+ + E RS YV + H
Sbjct: 61 IMLSYIRSKKLEHSN---DPFNVYIESDAWQEKDKAYVQARVLESYRSC---YVVENH 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.124 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,778,338
Number of Sequences: 37866
Number of extensions: 273226
Number of successful extensions: 1076
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 927
Number of HSP's gapped (non-prelim): 155
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.