Guide to the Human Genome
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Search of human proteins with 239746512

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo
sapiens]
         (560 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757512 PREDICTED: chromosome 20 open reading frame 123 [Ho...  1124   0.0  
gi|239752028 PREDICTED: hypothetical protein LOC128506 [Homo sap...  1124   0.0  
gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo sap...  1124   0.0  
gi|225637556 hypothetical protein LOC128506 [Homo sapiens]           1104   0.0  
gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]               54   3e-07
gi|13540565 dendritic cell-specific transmembrane protein [Homo ...    49   1e-05
gi|219521924 DC-STAMP domain containing 1 isoform 1 [Homo sapiens]     40   0.007
gi|219521926 DC-STAMP domain containing 1 isoform 2 [Homo sapiens]     37   0.048
gi|169166960 PREDICTED: hypothetical protein [Homo sapiens]            33   0.53 
gi|169166769 PREDICTED: hypothetical protein [Homo sapiens]            33   0.53 
gi|169166416 PREDICTED: hypothetical protein [Homo sapiens]            33   0.53 
gi|91206396 taste receptor, type 1, member 3 [Homo sapiens]            32   1.5  
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ...    30   4.5  
gi|4502425 bone morphogenetic protein 6 preproprotein [Homo sapi...    30   5.9  
gi|50345997 E1A binding protein p300 [Homo sapiens]                    30   7.7  
gi|20149496 EF-hand domain family, member D1 [Homo sapiens]            30   7.7  
gi|62988336 hypothetical protein LOC441168 [Homo sapiens]              30   7.7  
gi|54607124 RNA binding motif protein 15B [Homo sapiens]               29   10.0 
gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]           29   10.0 

>gi|239757512 PREDICTED: chromosome 20 open reading frame 123 [Homo
           sapiens]
          Length = 560

 Score = 1124 bits (2908), Expect = 0.0
 Identities = 560/560 (100%), Positives = 560/560 (100%)

Query: 1   MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV 60
           MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV
Sbjct: 1   MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV 60

Query: 61  YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS 120
           YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS
Sbjct: 61  YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS 120

Query: 121 TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT 180
           TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT
Sbjct: 121 TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT 180

Query: 181 FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH 240
           FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH
Sbjct: 181 FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH 240

Query: 241 CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL 300
           CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL
Sbjct: 241 CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL 300

Query: 301 ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA 360
           ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA
Sbjct: 301 ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA 360

Query: 361 PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR 420
           PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR
Sbjct: 361 PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR 420

Query: 421 HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL 480
           HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL
Sbjct: 421 HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL 480

Query: 481 DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT 540
           DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT
Sbjct: 481 DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT 540

Query: 541 YFPRRDVVRMEGNTGHDRPG 560
           YFPRRDVVRMEGNTGHDRPG
Sbjct: 541 YFPRRDVVRMEGNTGHDRPG 560


>gi|239752028 PREDICTED: hypothetical protein LOC128506 [Homo
           sapiens]
          Length = 560

 Score = 1124 bits (2908), Expect = 0.0
 Identities = 560/560 (100%), Positives = 560/560 (100%)

Query: 1   MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV 60
           MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV
Sbjct: 1   MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV 60

Query: 61  YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS 120
           YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS
Sbjct: 61  YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS 120

Query: 121 TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT 180
           TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT
Sbjct: 121 TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT 180

Query: 181 FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH 240
           FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH
Sbjct: 181 FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH 240

Query: 241 CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL 300
           CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL
Sbjct: 241 CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL 300

Query: 301 ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA 360
           ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA
Sbjct: 301 ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA 360

Query: 361 PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR 420
           PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR
Sbjct: 361 PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR 420

Query: 421 HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL 480
           HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL
Sbjct: 421 HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL 480

Query: 481 DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT 540
           DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT
Sbjct: 481 DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT 540

Query: 541 YFPRRDVVRMEGNTGHDRPG 560
           YFPRRDVVRMEGNTGHDRPG
Sbjct: 541 YFPRRDVVRMEGNTGHDRPG 560


>gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo
           sapiens]
          Length = 560

 Score = 1124 bits (2908), Expect = 0.0
 Identities = 560/560 (100%), Positives = 560/560 (100%)

Query: 1   MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV 60
           MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV
Sbjct: 1   MPFNFLVCRWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLV 60

Query: 61  YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS 120
           YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS
Sbjct: 61  YHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYS 120

Query: 121 TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT 180
           TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT
Sbjct: 121 TATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLT 180

Query: 181 FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH 240
           FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH
Sbjct: 181 FEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLH 240

Query: 241 CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL 300
           CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL
Sbjct: 241 CYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLL 300

Query: 301 ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA 360
           ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA
Sbjct: 301 ALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLA 360

Query: 361 PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR 420
           PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR
Sbjct: 361 PESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLR 420

Query: 421 HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL 480
           HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL
Sbjct: 421 HAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL 480

Query: 481 DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT 540
           DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT
Sbjct: 481 DALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVT 540

Query: 541 YFPRRDVVRMEGNTGHDRPG 560
           YFPRRDVVRMEGNTGHDRPG
Sbjct: 541 YFPRRDVVRMEGNTGHDRPG 560


>gi|225637556 hypothetical protein LOC128506 [Homo sapiens]
          Length = 566

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 551/551 (100%), Positives = 551/551 (100%)

Query: 10  WRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLL 69
           WRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLL
Sbjct: 16  WRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLL 75

Query: 70  YPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVV 129
           YPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVV
Sbjct: 76  YPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVV 135

Query: 130 PNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLTFEAQDNGSA 189
           PNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLTFEAQDNGSA
Sbjct: 136 PNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLTFEAQDNGSA 195

Query: 190 FYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFD 249
           FYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFD
Sbjct: 196 FYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFD 255

Query: 250 NIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLLALLLVATAV 309
           NIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLLALLLVATAV
Sbjct: 256 NIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLLALLLVATAV 315

Query: 310 AVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVH 369
           AVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVH
Sbjct: 316 AVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVH 375

Query: 370 SSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFT 429
           SSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFT
Sbjct: 376 SSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFT 435

Query: 430 AQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRLDALRTESSE 489
           AQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRLDALRTESSE
Sbjct: 436 AQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRLDALRTESSE 495

Query: 490 GEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVTYFPRRDVVR 549
           GEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVTYFPRRDVVR
Sbjct: 496 GEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVTYFPRRDVVR 555

Query: 550 MEGNTGHDRPG 560
           MEGNTGHDRPG
Sbjct: 556 MEGNTGHDRPG 566


>gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]
          Length = 773

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 22/241 (9%)

Query: 216 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPT 275
           AL      T L ++ L +++ +Y +CYL    +DNIY    +T R  + +A    A  PT
Sbjct: 322 ALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIY----ITSRFLRMEAVRSTAGLPT 377

Query: 276 WL-LQAAQLR---------LSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATV 325
            L L A + R         LSQ E    +L    L   L+     V  D+  F +     
Sbjct: 378 VLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLAR 437

Query: 326 DWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCPL 385
              Q        + V   V  T  G+   ++  L      L      Q  + + S RC L
Sbjct: 438 HQLQGEIVARSPVLVSLTVEGT--GYAGNIYRDLVSAFDVLQ-----QGNISILSRRCLL 490

Query: 386 LPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQR 445
            P+  P +   +  G +  L     L  +Y  RLR  I AS++ ++E  R+ +L+  L  
Sbjct: 491 RPSE-PDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLS 549

Query: 446 R 446
           R
Sbjct: 550 R 550



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)

Query: 64  LASLLLYPPGPSAMVATVCGLLVFLSLGL--VPPVRCLFALSVPTLGMEQGRRLLLSYST 121
           L  LL+    P   +     L  FLSLG+     VR    L +P     QGR LLL  + 
Sbjct: 42  LLELLVEGHSPWGCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAF 101

Query: 122 ATLAIAVVPNVLANVGAAGQVLRCVTEGSL 151
             +      N L N   A + + C  E +L
Sbjct: 102 GLVLQGPCANTLRNFTRASEAVACGAELAL 131


>gi|13540565 dendritic cell-specific transmembrane protein [Homo
           sapiens]
          Length = 470

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 99/495 (20%), Positives = 175/495 (35%), Gaps = 110/495 (22%)

Query: 15  LGFWKALAPL-QAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLLYPPG 73
           +G W +   +  + W+ +  P        +  L +C  +A  + GL+       L     
Sbjct: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFL----- 55

Query: 74  PSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVL 133
           PS + A    ++  + L      RC   L   + G+ +GR  L++  T  + +  V N+ 
Sbjct: 56  PSIIAAAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIF 115

Query: 134 ANVGAAGQVLRCVTEGS--------LESLLNTTHQLHAASRALGPTGQAGSRGLT----- 180
            N       + C             L+  +     ++  +  L       S   T     
Sbjct: 116 HNFKGLLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSL 175

Query: 181 ------FEAQDNGS----AFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLG 230
                  EAQ N S       L+ +  T +VL      + L   A L    + TGLFM  
Sbjct: 176 FSPSHVLEAQLNDSKGEVLSVLYQMATTTEVLSSLG--QKLLAFAGLSLVLLGTGLFMKR 233

Query: 231 LLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEEL 290
            L    W         +++NIY T+Q  Q     +  H   P          L L++EE 
Sbjct: 234 FLGPCGW---------KYENIYITRQFVQ--FDERERHQQRP--------CVLPLNKEER 274

Query: 291 LSCLL------------RLGLLAL-LLVATAVAV---ATDHVAFLLAQATVDWAQKLPTV 334
              ++             LGL  L +L+   + V   A D++ + L  +     Q LP  
Sbjct: 275 RKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGF 334

Query: 335 PI----------TLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCP 384
            +          T  + +D ++ +  F P       P+  FL           L+    P
Sbjct: 335 EVHLKLHGEKQGTQDIIHDSSFNISVFEP----NCIPKPKFL-----------LSETWVP 379

Query: 385 LLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQ 444
           L                + L+     LL +   +L+  ++ASF+ + E +R+++LHA+L 
Sbjct: 380 L--------------SVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLL 425

Query: 445 RRHDRHQGQQLPLGD 459
           ++  +      PLG+
Sbjct: 426 KKRSKQ-----PLGE 435


>gi|219521924 DC-STAMP domain containing 1 isoform 1 [Homo sapiens]
          Length = 706

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 14/131 (10%)

Query: 23  PLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLL-----LYPPGPSAM 77
           P+  +W  + QP     G+     LL   L A A GL+   L  LL     +Y       
Sbjct: 31  PVSCSWFLWRQP-----GEFPVTALL---LGAGAGGLLAIGLFQLLVNPMNIYEEQKIMF 82

Query: 78  VATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVLANVG 137
           + ++ GL   +  G  P +RC   L VP +  ++GR  +L Y+ A + +  V N+  N+ 
Sbjct: 83  LYSLVGLGA-MGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVGPVANLRHNLN 141

Query: 138 AAGQVLRCVTE 148
                L C  E
Sbjct: 142 NVIASLGCTVE 152



 Score = 37.0 bits (84), Expect = 0.048
 Identities = 92/357 (25%), Positives = 130/357 (36%), Gaps = 90/357 (25%)

Query: 216 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQ--------------RL 261
           ALG   V+     L +L  S  Y+  Y  D+RFDNIY +    Q               L
Sbjct: 373 ALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDRRKKLGKRTLLPL 432

Query: 262 AQAQATHLLAP-PPTWLLQAAQLRLSQEELLSCLLRLGLLALLL----VATAVAVATDHV 316
            +A+   ++ P  PT  +QA+++     ELL  L  L LL +L        ++     H 
Sbjct: 433 RKAEEKTVIFPCKPT--IQASEMSNVVRELLETLPILLLLVVLCGLDWALYSIFDTIRHH 490

Query: 317 AFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWEL 376
           +FL  Q +   + KL                 +G    L   L      L+  S    E 
Sbjct: 491 SFL--QYSFRSSHKLEVK--------------VGGDSMLARLLRKTIGALNTSS----ET 530

Query: 377 RLTSARCPLLP------ARRP-RAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFT 429
            + S   P LP      AR   RAA P+  G L  L     LL+A+  RLR  IAA +F 
Sbjct: 531 VMESNNMPCLPQPVGLDARAYWRAAVPI--GLLVCLC----LLQAFGYRLRRVIAAFYFP 584

Query: 430 AQEARRVRHLH---------------ARLQRRHDRHQGQQLPLGD---PSCVPTPRPACK 471
            +E +R+  L+               A + RR  + +  + PL D     C    R  C+
Sbjct: 585 KREKKRILFLYNDLLKKRAAFTKLRRAAILRRERQQKAPRHPLADILHRGCPLLRRWLCR 644

Query: 472 ----------PPAWIDYRLDALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKS 518
                     P +++   LD         E    WSC D      PV  P   L  S
Sbjct: 645 RCVVCQAPETPESYVCRTLDC--------EAVYCWSCWDDMRQRCPVCTPREELSSS 693


>gi|219521926 DC-STAMP domain containing 1 isoform 2 [Homo sapiens]
          Length = 681

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 92/357 (25%), Positives = 130/357 (36%), Gaps = 90/357 (25%)

Query: 216 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQ--------------RL 261
           ALG   V+     L +L  S  Y+  Y  D+RFDNIY +    Q               L
Sbjct: 348 ALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDRRKKLGKRTLLPL 407

Query: 262 AQAQATHLLAP-PPTWLLQAAQLRLSQEELLSCLLRLGLLALLL----VATAVAVATDHV 316
            +A+   ++ P  PT  +QA+++     ELL  L  L LL +L        ++     H 
Sbjct: 408 RKAEEKTVIFPCKPT--IQASEMSNVVRELLETLPILLLLVVLCGLDWALYSIFDTIRHH 465

Query: 317 AFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWEL 376
           +FL  Q +   + KL                 +G    L   L      L+  S    E 
Sbjct: 466 SFL--QYSFRSSHKLEVK--------------VGGDSMLARLLRKTIGALNTSS----ET 505

Query: 377 RLTSARCPLLP------ARRP-RAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFT 429
            + S   P LP      AR   RAA P+  G L  L     LL+A+  RLR  IAA +F 
Sbjct: 506 VMESNNMPCLPQPVGLDARAYWRAAVPI--GLLVCLC----LLQAFGYRLRRVIAAFYFP 559

Query: 430 AQEARRVRHLH---------------ARLQRRHDRHQGQQLPLGD---PSCVPTPRPACK 471
            +E +R+  L+               A + RR  + +  + PL D     C    R  C+
Sbjct: 560 KREKKRILFLYNDLLKKRAAFTKLRRAAILRRERQQKAPRHPLADILHRGCPLLRRWLCR 619

Query: 472 ----------PPAWIDYRLDALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKS 518
                     P +++   LD         E    WSC D      PV  P   L  S
Sbjct: 620 RCVVCQAPETPESYVCRTLDC--------EAVYCWSCWDDMRQRCPVCTPREELSSS 668



 Score = 35.0 bits (79), Expect = 0.18
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 68  LLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIA 127
           LL   G   ++A   G + +   G  P +RC   L VP +  ++GR  +L Y+ A + + 
Sbjct: 50  LLLGAGAGGLLAIGLGAMGW---GTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVG 106

Query: 128 VVPNVLANVGAAGQVLRCVTE 148
            V N+  N+      L C  E
Sbjct: 107 PVANLRHNLNNVIASLGCTVE 127


>gi|169166960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 383 CPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARR----LRHAIAASFFTAQEARRVRH 438
           C   P +RP AAA  A  A +L A    L E   +R     RH         +  R    
Sbjct: 72  CAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPT 131

Query: 439 LHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL------DALRTESSEGEG 492
           L AR  RR       QL  GD    PTP PA +P      R       ++ R +S EG+G
Sbjct: 132 LGAR-PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDG 190


>gi|169166769 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 383 CPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARR----LRHAIAASFFTAQEARRVRH 438
           C   P +RP AAA  A  A +L A    L E   +R     RH         +  R    
Sbjct: 72  CAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPT 131

Query: 439 LHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL------DALRTESSEGEG 492
           L AR  RR       QL  GD    PTP PA +P      R       ++ R +S EG+G
Sbjct: 132 LGAR-PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDG 190


>gi|169166416 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 383 CPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARR----LRHAIAASFFTAQEARRVRH 438
           C   P +RP AAA  A  A +L A    L E   +R     RH         +  R    
Sbjct: 72  CAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPT 131

Query: 439 LHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRL------DALRTESSEGEG 492
           L AR  RR       QL  GD    PTP PA +P      R       ++ R +S EG+G
Sbjct: 132 LGAR-PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDG 190


>gi|91206396 taste receptor, type 1, member 3 [Homo sapiens]
          Length = 852

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 27/63 (42%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 42  LLTQLLLCASLAAAAAGL-VYHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVP----PV 96
           LL  L L   L  AA GL V+H  + L+    GP A    VC  LV LS+ L P    P 
Sbjct: 572 LLLLLSLALGLVLAALGLFVHHRDSPLVQASGGPLACFGLVCLGLVCLSVLLFPGQPSPA 631

Query: 97  RCL 99
           RCL
Sbjct: 632 RCL 634


>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 179

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 11/75 (14%)

Query: 379 TSARCPLLPARRPRAAAPL-------AAGALQLLAGST--VLLEAYARRLRHAIAASFFT 429
           TS+R P   ARR   A P        AAGAL++  G T      A +R L   +AA+   
Sbjct: 64  TSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA--A 121

Query: 430 AQEARRVRHLHARLQ 444
              ARR R LH R Q
Sbjct: 122 GLGARRARRLHLRGQ 136


>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
           sapiens]
          Length = 179

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 11/75 (14%)

Query: 379 TSARCPLLPARRPRAAAPL-------AAGALQLLAGST--VLLEAYARRLRHAIAASFFT 429
           TS+R P   ARR   A P        AAGAL++  G T      A +R L   +AA+   
Sbjct: 64  TSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA--A 121

Query: 430 AQEARRVRHLHARLQ 444
              ARR R LH R Q
Sbjct: 122 GLGARRARRLHLRGQ 136


>gi|4502425 bone morphogenetic protein 6 preproprotein [Homo
           sapiens]
          Length = 513

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 9/74 (12%)

Query: 443 LQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRLDALRTE-----SSEGEGKELWS 497
           L+++ ++ Q QQLP G+P   P  R    P   +D   +AL  +     +SEGE ++ W 
Sbjct: 107 LRQQEEQQQQQQLPRGEP---PPGRLKSAPLFMLDL-YNALSADNDEDGASEGERQQSWP 162

Query: 498 CRDLSCNLGPVPPP 511
               S +    PPP
Sbjct: 163 HEAASSSQRRQPPP 176


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 401  ALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLP---- 456
            AL   AG++  L+AY +RL      S          +H+    Q +    QGQQ+P    
Sbjct: 2248 ALGAEAGAS--LQAYQQRLLQQQMGSPVQPNPMSPQQHMLPN-QAQSPHLQGQQIPNSLS 2304

Query: 457  --LGDPSCVPTPRPACKPP 473
              +  P  VP+PRP  +PP
Sbjct: 2305 NQVRSPQPVPSPRPQSQPP 2323


>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
          Length = 239

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 439 LHARLQRRHDRHQGQQL-PLGDPSCVPTPRPACKPPA 474
           L  RL+R      G QL PLG P+  P P+P  +PPA
Sbjct: 10  LERRLRREEAEESGPQLAPLGAPA--PEPKPEPEPPA 44


>gi|62988336 hypothetical protein LOC441168 [Homo sapiens]
          Length = 315

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 37  ASCGQLLTQLLLCASLAAAAAGLVYHWLASLLL 69
           ASCG  L   L+C  ++AAAA     W+A  LL
Sbjct: 87  ASCGSALRGSLVCTQISAAAALAPLTWVAVALL 119


>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
          Length = 890

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 360 APESP--FLSVHSSYQWELR-LTSARCPLLPARRPRAAAPLAAGALQLLAGSTV 410
           AP  P  +L +H  YQ++ R L+    P  P R PRA    AA AL   A + V
Sbjct: 245 APADPLGYLPLHGGYQYKQRSLSPVAAP--PLREPRARHAAAAFALDAAAAAAV 296


>gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]
          Length = 1564

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 278  LQAAQLRLSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPIT 337
            LQ A  R S    LS LLRL LLAL +      ++ DH   L+ +AT + A KL   P+ 
Sbjct: 1427 LQLASQRGSWSGKLSSLLRLALLALKV--CMANISNDHWPSLVQEATTE-ALKLCFCPLA 1483

Query: 338  LTVK 341
            + ++
Sbjct: 1484 VLLQ 1487


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.136    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,687,674
Number of Sequences: 37866
Number of extensions: 1044732
Number of successful extensions: 4150
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4125
Number of HSP's gapped (non-prelim): 29
length of query: 560
length of database: 18,247,518
effective HSP length: 107
effective length of query: 453
effective length of database: 14,195,856
effective search space: 6430722768
effective search space used: 6430722768
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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