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Search of human proteins with 239746437
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746437 PREDICTED: hypothetical protein XP_002344221 [Homo
sapiens]
(503 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746437 PREDICTED: hypothetical protein XP_002344221 [Homo ... 1034 0.0
gi|239757437 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|239751954 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 42 0.002
gi|51988914 fibroblast growth factor receptor-like 1 precursor [... 38 0.025
gi|51988910 fibroblast growth factor receptor-like 1 precursor [... 38 0.025
gi|51988912 fibroblast growth factor receptor-like 1 precursor [... 38 0.025
gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 37 0.042
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.055
gi|115511036 alpha-kinase 3 [Homo sapiens] 36 0.093
gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sap... 36 0.093
gi|46249382 paired-like homeobox 2a [Homo sapiens] 35 0.12
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 35 0.16
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 34 0.27
gi|239747930 PREDICTED: hypothetical protein [Homo sapiens] 34 0.35
gi|239741824 PREDICTED: hypothetical protein [Homo sapiens] 34 0.35
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 34 0.35
gi|4826828 myelodysplasia syndrome protein 1 [Homo sapiens] 33 0.46
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 33 0.61
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 33 0.61
gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens] 33 0.61
gi|153090207 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090203 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090201 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090191 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090182 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|148540145 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090205 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090199 Golgi-localized syntaphilin-related protein isoform... 33 0.61
gi|153090197 Golgi-localized syntaphilin-related protein isoform... 33 0.61
>gi|239746437 PREDICTED: hypothetical protein XP_002344221 [Homo
sapiens]
Length = 503
Score = 1034 bits (2674), Expect = 0.0
Identities = 503/503 (100%), Positives = 503/503 (100%)
Query: 1 MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR 60
MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR
Sbjct: 1 MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR 60
Query: 61 VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP 120
VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP
Sbjct: 61 VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP 120
Query: 121 GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG 180
GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG
Sbjct: 121 GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG 180
Query: 181 PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS 240
PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS
Sbjct: 181 PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS 240
Query: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGC 300
RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGC
Sbjct: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGC 300
Query: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK 360
SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK
Sbjct: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK 360
Query: 361 PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND 420
PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND
Sbjct: 361 PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND 420
Query: 421 ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF 480
ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF
Sbjct: 421 ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF 480
Query: 481 GASGLWATSVFLPWTEADSVFLP 503
GASGLWATSVFLPWTEADSVFLP
Sbjct: 481 GASGLWATSVFLPWTEADSVFLP 503
>gi|239757437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 503
Score = 1033 bits (2671), Expect = 0.0
Identities = 502/503 (99%), Positives = 503/503 (100%)
Query: 1 MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR 60
MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR
Sbjct: 1 MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR 60
Query: 61 VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP 120
VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP
Sbjct: 61 VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP 120
Query: 121 GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG 180
GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG
Sbjct: 121 GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG 180
Query: 181 PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS 240
PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS
Sbjct: 181 PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS 240
Query: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGC 300
RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTR+KGC
Sbjct: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRRKGC 300
Query: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK 360
SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK
Sbjct: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK 360
Query: 361 PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND 420
PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND
Sbjct: 361 PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND 420
Query: 421 ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF 480
ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF
Sbjct: 421 ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF 480
Query: 481 GASGLWATSVFLPWTEADSVFLP 503
GASGLWATSVFLPWTEADSVFLP
Sbjct: 481 GASGLWATSVFLPWTEADSVFLP 503
>gi|239751954 PREDICTED: hypothetical protein [Homo sapiens]
Length = 503
Score = 1033 bits (2671), Expect = 0.0
Identities = 502/503 (99%), Positives = 503/503 (100%)
Query: 1 MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR 60
MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR
Sbjct: 1 MPGSCASCPGRSLVKPSSLQGPWGGAEAGKLSLLALHLARGLVQGIPQDGVLLLQAGQLR 60
Query: 61 VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP 120
VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP
Sbjct: 61 VGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRP 120
Query: 121 GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG 180
GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG
Sbjct: 121 GPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLG 180
Query: 181 PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS 240
PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS
Sbjct: 181 PAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAVAGEQEHGSS 240
Query: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGC 300
RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTR+KGC
Sbjct: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRRKGC 300
Query: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK 360
SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK
Sbjct: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDK 360
Query: 361 PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND 420
PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND
Sbjct: 361 PSPSPLRLYLVELPQFALGDSRIFLFCGQQFFLLFQLAFQNRHRVTLLRWAHLVPGVLND 420
Query: 421 ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF 480
ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF
Sbjct: 421 ASLLRQDLDEPLGLALVEHHAPNRGDQRLVGEVERAVGIWGPCSPFFFEPDFFLAGASCF 480
Query: 481 GASGLWATSVFLPWTEADSVFLP 503
GASGLWATSVFLPWTEADSVFLP
Sbjct: 481 GASGLWATSVFLPWTEADSVFLP 503
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 238 GSSRRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRK---GTECLSTDKG 294
GS +R +E +Q E R RR C D R+ G+ K+K + P+E + G L +++
Sbjct: 970 GSCKRRQKE-HQKEHRRHRRACKDSVGRRPREGRAKAKAKVPKEKSRRVLGNLDLQSEEI 1028
Query: 295 TRKKGCSPDTVGQS-----TIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGW 349
++ PD G S T A P P P + K A + PG+ R
Sbjct: 1029 QGREKSRPDLGGASKAKPPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRA- 1087
Query: 350 GGGPLRTGEDKPSPSPLRLYLVELPQFALGDSRIFL 385
LR+ + P P L++ L+++ GD F+
Sbjct: 1088 DMLKLRSLSEGP-PKELKIRLIKVES---GDKETFI 1119
>gi|51988914 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.025
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 12/149 (8%)
Query: 72 PDLESHGPCPAKCNSPWTPKPDQTLQTPVG---ILNPLLMPHPLGLSGSLRPGPGLGPVP 128
PD + GP A +S + + P G IL LL+ P P P+P
Sbjct: 357 PDPKPPGPPVASSSSATSLPWPVVIGIPAGAVFILGTLLLWLCQAQKKPCTPAPA-PPLP 415
Query: 129 SHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLGPAVMTTPQ 188
H P + LP+LA + G E HG+ P +P H LGP + P+
Sbjct: 416 GHRPPGTARDRSGD-----KDLPSLAALSAGPGVGLCEEHGS-PAAPQHLLGPGPVAGPK 469
Query: 189 L--DSVTNIQGPWDTYFYSSAFIRTERHQ 215
L T+I T+ ++ + + + HQ
Sbjct: 470 LYPKLYTDIHTHTHTHSHTHSHVEGKVHQ 498
>gi|51988910 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.025
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 12/149 (8%)
Query: 72 PDLESHGPCPAKCNSPWTPKPDQTLQTPVG---ILNPLLMPHPLGLSGSLRPGPGLGPVP 128
PD + GP A +S + + P G IL LL+ P P P+P
Sbjct: 357 PDPKPPGPPVASSSSATSLPWPVVIGIPAGAVFILGTLLLWLCQAQKKPCTPAPA-PPLP 415
Query: 129 SHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLGPAVMTTPQ 188
H P + LP+LA + G E HG+ P +P H LGP + P+
Sbjct: 416 GHRPPGTARDRSGD-----KDLPSLAALSAGPGVGLCEEHGS-PAAPQHLLGPGPVAGPK 469
Query: 189 L--DSVTNIQGPWDTYFYSSAFIRTERHQ 215
L T+I T+ ++ + + + HQ
Sbjct: 470 LYPKLYTDIHTHTHTHSHTHSHVEGKVHQ 498
>gi|51988912 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.025
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 12/149 (8%)
Query: 72 PDLESHGPCPAKCNSPWTPKPDQTLQTPVG---ILNPLLMPHPLGLSGSLRPGPGLGPVP 128
PD + GP A +S + + P G IL LL+ P P P+P
Sbjct: 357 PDPKPPGPPVASSSSATSLPWPVVIGIPAGAVFILGTLLLWLCQAQKKPCTPAPA-PPLP 415
Query: 129 SHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLGPAVMTTPQ 188
H P + LP+LA + G E HG+ P +P H LGP + P+
Sbjct: 416 GHRPPGTARDRSGD-----KDLPSLAALSAGPGVGLCEEHGS-PAAPQHLLGPGPVAGPK 469
Query: 189 L--DSVTNIQGPWDTYFYSSAFIRTERHQ 215
L T+I T+ ++ + + + HQ
Sbjct: 470 LYPKLYTDIHTHTHTHSHTHSHVEGKVHQ 498
>gi|100913209 heat shock transcription factor 4 isoform b [Homo
sapiens]
Length = 492
Score = 37.0 bits (84), Expect = 0.042
Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 54 LQAGQLRVGAILQLLLKSPDLESHGPCPAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLG 113
LQAG G +L L D S P PAK N+ P P LQ P I +PL + LG
Sbjct: 196 LQAGPSNAGGKRKLSLML-DEGSSCPTPAKFNT--CPLPGALLQDPYFIQSPLPETN-LG 251
Query: 114 LSGSLRPGPGLGPVPSHAPASHYTHLA 140
LS GP + +P +P+ T L+
Sbjct: 252 LSPHRARGPIISDIPEDSPSPEGTRLS 278
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 36.6 bits (83), Expect = 0.055
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 12/111 (10%)
Query: 257 RQCPDIQARKG--IRGQGKSKRRAPEESRKGTECLSTDKGTRKKGCSPDTVGQSTIQALP 314
R P Q R G G G+ +RR R + + + R++ G S
Sbjct: 367 RSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSS------ 420
Query: 315 LRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWGGGPLRTGEDKPSPSP 365
R L + G G+ P GP EPG RG GG R E P P
Sbjct: 421 -RSLSRARSSSDSGSGRGAPGPGP---EPGSERGHGGHGKRAKERPPRARP 467
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 35.8 bits (81), Expect = 0.093
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 241 RRLLREGNQIESSRVRRQCPDIQARKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGC 300
R L EG Q S R + P + + +R + + AP + T RK+
Sbjct: 629 RPLGEEGPQTLSVRAPGESP--KGKAPLRARSEGVPGAPGQPTHSLTPQPTRPFNRKRFA 686
Query: 301 SPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPAAGPSISEPGIHRGWG 350
P G++T + P+ L + G Q GK+ P A + P R G
Sbjct: 687 PPKPKGEATTDSKPISSLSQAPECGAQSLGKAPPQASVQVPTPPARRRHG 736
Score = 30.8 bits (68), Expect = 3.0
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 37/136 (27%)
Query: 272 GKSKRRAPEESR--KGTECLST------DKGTRKKGCSPDTVGQSTIQALPLRPLPGMEK 323
G SK R P +R +G + ++T ++G R+ G+ PG
Sbjct: 134 GVSKPRCPGRARPGEGQQQVTTARPPAINRGARQPRAGAAAAGRG----------PG--- 180
Query: 324 AGRQGEGKSKPAAGPSISEPGI-------HRGWGGGPLR----TGEDK-----PSPSPLR 367
AG G++ +AGP++ E G RGWG G GED PSP+
Sbjct: 181 AGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGWGAGGRSGAGGDGEDDGPVWIPSPASRS 240
Query: 368 LYLVELPQFALGDSRI 383
L P+ +L +R+
Sbjct: 241 YLLSVRPETSLSSNRL 256
>gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo
sapiens]
Length = 666
Score = 35.8 bits (81), Expect = 0.093
Identities = 35/142 (24%), Positives = 50/142 (35%), Gaps = 14/142 (9%)
Query: 207 AFIRTERHQALMARVGVGPAASSAVAGEQEHGSSRRLLREGNQIESSRVRRQCPDIQARK 266
A R+ A GP + A A HG +R LL R +++ P
Sbjct: 2 ALFYVARYPGPDAAAAAGPEGAEAGA----HGRARALLERLQSRARERQQQREPAQTEAA 57
Query: 267 GIRGQGKSKRRAPEESRKGTECL----STDKGTRKKGCSPDTVGQSTIQALPLRPLPGME 322
+RR P R+ + +G R+K D +S +A PG
Sbjct: 58 ASTEPATRRRRRPRRRRRVNDAEPGSPEAPQGKRRKADGEDAGAESNEEA------PGEP 111
Query: 323 KAGRQGEGKSKPAAGPSISEPG 344
AG E +P+AG S PG
Sbjct: 112 SAGSSEEAPGEPSAGSSEEAPG 133
>gi|46249382 paired-like homeobox 2a [Homo sapiens]
Length = 284
Score = 35.4 bits (80), Expect = 0.12
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 86 SPWTPKPDQTLQTPV----GILNPLLMPHPLGLSGSLRPGPGLGPVP 128
S +P PD T P G+ +P L P PL ++ PGPG GP P
Sbjct: 180 STCSPTPDSTASLPPPPAPGLASPRLSPSPLPVALGSGPGPGPGPQP 226
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 35.0 bits (79), Expect = 0.16
Identities = 71/291 (24%), Positives = 106/291 (36%), Gaps = 45/291 (15%)
Query: 90 PKPDQTLQ---TPVGILNPLLMPHPLGLSGSLRPGPGLGPVPSHAPASHYTHLALQLLHL 146
P+P L P L P L P LG+ +L PG G +P A A + +LL
Sbjct: 293 PQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPP-AQAEMFARQQ-ELLRK 350
Query: 147 LHVLPALATVEV-ADAAGTAETHGAVPGSPGHWLGPAVMTTPQLDSVTNIQGPWDTYFYS 205
+ LA +E+ AD E A P L P P G +
Sbjct: 351 QN----LARLELPADLLRQKELESARP----QLLAPETALRPN-------DGAEELQRRG 395
Query: 206 SAFIRTERHQALMARVGVGPAASSAVAGEQEHGSSRRLLREGNQIESSRVRRQCPDIQAR 265
+ + L+A GP S ++ S+RR R+G +S + ++
Sbjct: 396 ALLVLNHGAAPLLALPPQGPPGSGPPTPSRD--SARRAPRKGGPGPASARPSESKEMTGA 453
Query: 266 KGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGCSPDTVGQSTIQALPLRPLPGMEKAG 325
+ + Q S+ P++S D T GC T GQ+ P G AG
Sbjct: 454 R-LWAQDGSEDEPPKDSD------GEDPETAAVGCRGPTPGQA--------PAGG---AG 495
Query: 326 RQGEG----KSKPAAGPSISEPGIHRGWGGGPLRTGEDKPSPSPLRLYLVE 372
+G+G + P P P H G GG GE+ P+P + + V+
Sbjct: 496 AEGKGLFPGSTLPLGFPYAVSPYFHTGAVGGLSMDGEEAPAPEDVTKWTVD 546
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 34.3 bits (77), Expect = 0.27
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 276 RRAPEESRKGTECLSTDKGTRKKGCSPDTVGQSTIQALPLRPLPGMEKAGRQGEGKSKPA 335
R PEE + L + R +G S + + +Q LP +PLP QG+G+S+ +
Sbjct: 575 RPLPEEGEERRR-LGAEPTVRPRGRSMQALAEEDLQHLPPQPLPPQLS---QGDGRSETS 630
Query: 336 AGPSISEPGIHRGWGGGPLRTGEDKPSPSPLRLYLVELPQF 376
P+ P H GP + P R P F
Sbjct: 631 QPPTPGSPS-HSPLHSGPRPRRRESDPTGPQRQVFSVAPPF 670
>gi|239747930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 33.9 bits (76), Expect = 0.35
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 265 RKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGCSPDTV--GQSTIQALPLRPLPGME 322
R G+RG+ S P+ R+G STD ++ C P + GQ + Q P P +
Sbjct: 117 RLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTP-ARLR 175
Query: 323 KAGRQGEGKSKPAAGPSISEPGIHR 347
KA Q SK S +PG R
Sbjct: 176 KARPQSAAASKRGLSLSPPQPGPRR 200
>gi|239741824 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 33.9 bits (76), Expect = 0.35
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 265 RKGIRGQGKSKRRAPEESRKGTECLSTDKGTRKKGCSPDTV--GQSTIQALPLRPLPGME 322
R G+RG+ S P+ R+G STD ++ C P + GQ + Q P P +
Sbjct: 117 RLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTP-ARLR 175
Query: 323 KAGRQGEGKSKPAAGPSISEPGIHR 347
KA Q SK S +PG R
Sbjct: 176 KARPQSAAASKRGLSLSPPQPGPRR 200
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 33.9 bits (76), Expect = 0.35
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 73 DLESHGPCPAKCNSPW---------TPKPDQTLQTP--VGILNPLLMPHPLGLSGSLRPG 121
D E+ P P+ P+ +P P +L P V L PL P+ GL SL P
Sbjct: 536 DSETSSPAPSPVQPPFFSECSLGYFSPAPSLSLPPPPQVSSLPPLSQPYVEGLCVSLEPL 595
Query: 122 PGLGPVPSHAP 132
P L P+P P
Sbjct: 596 PPLPPLPPLPP 606
>gi|4826828 myelodysplasia syndrome protein 1 [Homo sapiens]
Length = 169
Score = 33.5 bits (75), Expect = 0.46
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 71 SPDLESHGPC-PAKCNSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRPGPGLG 125
+P L PC PA + +TPK + P+ I + + +P L S PG GLG
Sbjct: 38 TPSLNIQEPCSPATSSEAFTPKEGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLG 93
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 85 NSPWTPKPDQTLQTPVGILNPLLMPHPLGLSGSLRPGPGLGPVPSHAPASHYTHLALQ-- 142
+SP +PKP PVG L+ LL P + P P L P PS +P+S +LQ
Sbjct: 984 SSPKSPKPGAPSGHPVGSLDGLLSPE------ASSPYPPLPPRPSASPSS-----SLQPP 1032
Query: 143 ----LLHLLHVLPALATVEVADAAGTAETHGAVPGSPGHWLGPA--VMTTP 187
L+ LP + V A G A + + G G + A V TP
Sbjct: 1033 PPPPAPGELYRLPPASAVATAQGPGAASSLSSDTGDNGDYTEMAFGVAATP 1083
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 33.1 bits (74), Expect = 0.61
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 19/184 (10%)
Query: 113 GLSGSLRPGPGLGPVPSHAPASHYTHLALQLLHLLHVLPALATVEVADAAGTAE-THGAV 171
GL +LR G GLG PS AP A PA + E ++ T E + G+
Sbjct: 1435 GLRSALRRGLGLGRAPSPAPRPVPGSPARD-------APAEGSGEGLNSPSTLECSPGSQ 1487
Query: 172 PGSPGHWLGPAVMTTPQLDSVTNIQGPWDTYFYSSAFIRTERHQALMARVGVGPAASSAV 231
P SPG PA +P LD ++G + + ER + L + + +
Sbjct: 1488 PPSPGPATSPA---SPDLDPEA-VRGALREFLQELRSAQRERDE-LRTQTSALNRQLAEM 1542
Query: 232 AGEQEHGSSRRLLREGNQIESSRVRR----QCPDIQARKGIRGQGKSKRRAPEESRKGTE 287
E++ +SR + ES RR + +QA + Q +S RR+ E R +
Sbjct: 1543 EAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELAL--QEESVRRSERERRATLD 1600
Query: 288 CLST 291
++T
Sbjct: 1601 QVAT 1604
>gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
Length = 1538
Score = 33.1 bits (74), Expect = 0.61
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 14/185 (7%)
Query: 152 ALATVEVADAAGTAETHGAVPGSPGHW--LGPAVMTTPQLDSVTNIQGPWDTYFYSSAFI 209
A A +V+ ++GT A PG + LG S TN+ D S A +
Sbjct: 608 ASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKV 667
Query: 210 RTERHQALMAR-VGVGPAASSAVAGEQEHGSSRRLLREGNQIESSRVRRQCPDIQARKGI 268
++ ++ A G G +SS + GS L G SSR P + R I
Sbjct: 668 VSQSQRSRSANPAGAGSRSSSP---GKLLGSGYGGLTGG----SSRGPPVTPSSEKRSKI 720
Query: 269 -RGQGKSKRRAPEESRKGTECLST-DKGTRKKGCSPDTVGQSTIQALPLRPLPGMEKAGR 326
R QG S+ +P +R G S + + +GCS DT +S+ P R P +++ G
Sbjct: 721 PRSQGCSRETSP--NRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGL 778
Query: 327 QGEGK 331
G+
Sbjct: 779 GQPGR 783
>gi|153090207 Golgi-localized syntaphilin-related protein isoform c
[Homo sapiens]
Length = 660
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 101 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 159
Query: 346 HRGWGG 351
H G
Sbjct: 160 HMSTAG 165
>gi|153090203 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 103 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 161
Query: 346 HRGWGG 351
H G
Sbjct: 162 HMSTAG 167
>gi|153090201 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 103 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 161
Query: 346 HRGWGG 351
H G
Sbjct: 162 HMSTAG 167
>gi|153090191 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 103 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 161
Query: 346 HRGWGG 351
H G
Sbjct: 162 HMSTAG 167
>gi|153090182 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 103 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 161
Query: 346 HRGWGG 351
H G
Sbjct: 162 HMSTAG 167
>gi|148540145 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 103 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 161
Query: 346 HRGWGG 351
H G
Sbjct: 162 HMSTAG 167
>gi|153090205 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 104 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 162
Query: 346 HRGWGG 351
H G
Sbjct: 163 HMSTAG 168
>gi|153090199 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 104 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 162
Query: 346 HRGWGG 351
H G
Sbjct: 163 HMSTAG 168
>gi|153090197 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 33.1 bits (74), Expect = 0.61
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 288 CLSTDKGTRKKGCSPDTVGQSTIQALPLR--PLPGMEKAGRQGEGKSKPAAGPSISEPGI 345
C +D+G +K C+ VG+ +IQ+ + G+ K G + + S + G SIS P +
Sbjct: 104 CPGSDEGFTRKKCTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTG-SISAPEV 162
Query: 346 HRGWGG 351
H G
Sbjct: 163 HMSTAG 168
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,114,835
Number of Sequences: 37866
Number of extensions: 1309125
Number of successful extensions: 5184
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 5083
Number of HSP's gapped (non-prelim): 193
length of query: 503
length of database: 18,247,518
effective HSP length: 107
effective length of query: 396
effective length of database: 14,195,856
effective search space: 5621558976
effective search space used: 5621558976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.