Guide to the Human Genome
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Name: ZNF680 Sequence: fasta or formatted (530aa) NCBI GI: 194097407
Description:

zinc finger protein 680 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [123aa] zinc finger protein 680 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         16           1
 C cysteine            6.2         33           1
 D aspartate           2.3         12           1
 E glutamate           9.4         50           2
 F phenylalanine       5.8         31           1
 G glycine             6.0         32           1
 H histidine           6.2         33           1
 I isoleucine          5.1         27           2
 K lysine             13.8         73           2
 L leucine             6.0         32           1
 M methionine          1.3          7           1
 N asparagine          5.7         30           2
 P proline             3.4         18           2
 Q glutamine           2.6         14           1
 R arginine            4.2         22           1
 S serine              6.0         32           2
 T threonine           5.8         31           2
 V valine              2.8         15           1
 W tryptophan          1.1          6           1
 Y tyrosine            3.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 680 isoform 1 
ZNF273                0.748   zinc finger protein 273 
ZNF92                 0.701   zinc finger protein 92 isoform 2 
ZNF98                 0.694   zinc finger protein 98 
LOC646864             0.690   PREDICTED: similar to hCG36734 
LOC646864             0.690   PREDICTED: similar to hCG36734 
LOC646864             0.690   PREDICTED: similar to hCG36734 
ZNF431                0.689   zinc finger protein 431 
ZNF85                 0.685   zinc finger protein 85 
ZNF493                0.674   zinc finger protein 493 isoform 3 
ZNF430                0.672   zinc finger protein 430 
ZNF726                0.671   PREDICTED: zinc finger protein 726 
ZNF726                0.671   PREDICTED: zinc finger protein 726 
ZNF726                0.671   PREDICTED: zinc finger protein 726 
ZNF708                0.669   zinc finger protein 708 
ZNF257                0.667   zinc finger protein 257 
LOC730110             0.660   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.659   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.659   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF254                0.658   zinc finger protein 254 
ZNF737                0.657   zinc finger protein 737 
ZNF737                0.657   PREDICTED: zinc finger protein 737 
ZNF737                0.657   PREDICTED: zinc finger protein 737 
ZNF737                0.657   PREDICTED: zinc finger protein 737 
ZNF730                0.656   PREDICTED: zinc finger protein 730 
ZNF66                 0.656   PREDICTED: zinc finger protein 66 
ZNF730                0.656   PREDICTED: zinc finger protein 730 
ZNF66                 0.656   PREDICTED: zinc finger protein 66 
ZNF66                 0.656   PREDICTED: zinc finger protein 66 
ZNF429                0.656   zinc finger protein 429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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