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Search of human proteins with 239745068
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens]
(618 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens] 1288 0.0
gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens] 1013 0.0
gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens] 591 e-169
gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo sap... 564 e-161
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 162 7e-40
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 131 2e-30
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 131 2e-30
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 66 8e-11
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 45 2e-04
gi|73476377 LBXCOR1 homolog [Homo sapiens] 45 3e-04
gi|156416026 zinc finger protein 219 [Homo sapiens] 44 4e-04
gi|156415998 zinc finger protein 219 [Homo sapiens] 44 4e-04
gi|156415996 zinc finger protein 219 [Homo sapiens] 44 4e-04
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 42 0.002
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 42 0.002
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 41 0.004
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] 41 0.004
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] 41 0.004
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 41 0.004
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 41 0.004
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 41 0.004
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 41 0.004
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 40 0.005
gi|148613878 acrosin precursor [Homo sapiens] 40 0.005
gi|7706687 Enah/Vasp-like [Homo sapiens] 40 0.005
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 40 0.006
>gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 618
Score = 1288 bits (3334), Expect = 0.0
Identities = 618/618 (100%), Positives = 618/618 (100%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR 60
MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR
Sbjct: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR 60
Query: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD
Sbjct: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
Query: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS
Sbjct: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
Query: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
ELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNL
Sbjct: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
Query: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ
Sbjct: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
Query: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR
Sbjct: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
Query: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW
Sbjct: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
Query: 421 YLLLEKEGAVAMPEAAGEVNIARHRPSPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
YLLLEKEGAVAMPEAAGEVNIARHRPSPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF
Sbjct: 421 YLLLEKEGAVAMPEAAGEVNIARHRPSPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
Query: 481 MDTCMLYDVRVCRMWALYLHPRALCLTLRASSVDRWRTCRCRAVLRAPVPPGGAKNYAES 540
MDTCMLYDVRVCRMWALYLHPRALCLTLRASSVDRWRTCRCRAVLRAPVPPGGAKNYAES
Sbjct: 481 MDTCMLYDVRVCRMWALYLHPRALCLTLRASSVDRWRTCRCRAVLRAPVPPGGAKNYAES 540
Query: 541 DHSEDEDNDNNSATTEESTKKNKKKPPKKTSRYERTDTGEITSYITEDDVVYRPGVPLAI 600
DHSEDEDNDNNSATTEESTKKNKKKPPKKTSRYERTDTGEITSYITEDDVVYRPGVPLAI
Sbjct: 541 DHSEDEDNDNNSATTEESTKKNKKKPPKKTSRYERTDTGEITSYITEDDVVYRPGVPLAI 600
Query: 601 SYCYSIAVDVVTSSPFEC 618
SYCYSIAVDVVTSSPFEC
Sbjct: 601 SYCYSIAVDVVTSSPFEC 618
>gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 511
Score = 1013 bits (2618), Expect = 0.0
Identities = 486/492 (98%), Positives = 487/492 (98%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR 60
MGLGTRHNHGRRTGRLSQSAREGGGWARPARA RRGGHPAHFCWSRPPVSRERDDPSAPR
Sbjct: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
Query: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD
Sbjct: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
Query: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS
Sbjct: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
Query: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
ELPSPQRVEFLCGLLDLCMPLEVRFFGS LEDLARKDYHSLRDSEIKANNPADLGSLTNL
Sbjct: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
Query: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ
Sbjct: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
Query: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR
Sbjct: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
Query: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW
Sbjct: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
Query: 421 YLLLEKEGAVAMPEAAGEVNIARHRPSPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
YLLLEKEGAVAMPEAAGEVNIARHR SPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF
Sbjct: 421 YLLLEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
Query: 481 MDTCMLYDVRVC 492
MDTCMLYD +C
Sbjct: 481 MDTCMLYDSILC 492
>gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 317
Score = 591 bits (1524), Expect = e-169
Identities = 294/348 (84%), Positives = 294/348 (84%), Gaps = 51/348 (14%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR 60
MGLGTRHNHGRRTGRLSQSAREGGGWARPARA RRGGHPAHFCWSRPPVSRERDDPSAPR
Sbjct: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
Query: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
PVPALPSSPSPPPP RPFRGRGPHRSLGCD
Sbjct: 61 PVPALPSSPSPPPP-------------------------------RPFRGRGPHRSLGCD 89
Query: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCW--------- 171
AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCW
Sbjct: 90 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWARAWAREGA 149
Query: 172 -----------RDGVYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHS 220
RDGVYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHS
Sbjct: 150 SPVVEKRCPLQRDGVYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHS 209
Query: 221 LRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTG 280
LRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTG
Sbjct: 210 LRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTG 269
Query: 281 DEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQA 328
DEFLLPFTMSSNHRAF FHQKQVL QELTQIQSSLNGGGGHLPGLPQA
Sbjct: 270 DEFLLPFTMSSNHRAFCFHQKQVLRQELTQIQSSLNGGGGHLPGLPQA 317
>gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo
sapiens]
Length = 300
Score = 564 bits (1454), Expect = e-161
Identities = 277/281 (98%), Positives = 278/281 (98%)
Query: 212 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 271
DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL
Sbjct: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
Query: 272 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 331
THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV
Sbjct: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 120
Query: 332 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 391
HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ
Sbjct: 121 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 180
Query: 392 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRPSPSEL 451
GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHR SPSEL
Sbjct: 181 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 240
Query: 452 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDVRVC 492
LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYD +C
Sbjct: 241 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILC 281
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 162 bits (411), Expect = 7e-40
Identities = 117/310 (37%), Positives = 143/310 (46%), Gaps = 74/310 (23%)
Query: 62 VPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
+P P+ P+ PPP A + G + P+ RDCR P RGP L
Sbjct: 6 LPLKPTHPAEPPPEAEEPEADARPGAKAPSRRRRDCRPPPPPPPPAGPSRGP---LPPPP 62
Query: 122 APAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS- 180
P LG P GAG GGG P E VY WF
Sbjct: 63 PPRGLG---PPVAGGAAAGAGMPGGGGGPSAALREQER---------------VYEWFGL 104
Query: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
L S QR+EF+CGLLDLC PLE+RF GSCLEDLARKDYH LRDSE KAN +D G L +
Sbjct: 105 VLGSAQRLEFMCGLLDLCNPLELRFLGSCLEDLARKDYHYLRDSEAKANGLSDPGPLADF 164
Query: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLN-----------EGRTG--------- 280
+ VRS+L+V LALLGSE EAAG L+R L ++ EG G
Sbjct: 165 REPAVRSRLIVYLALLGSENREAAGRLHRLLPQVDSVLKSLRAARGEGSRGGAEDERGED 224
Query: 281 --------------------------------DEFLLPFTMSSNHRAFSFHQKQVLCQEL 308
+E LL FTM+S H AFSFHQ+ L + L
Sbjct: 225 GDGEQDAEKDGSGPEGGIVEPRVGGGLGSRAQEELLLLFTMASLHPAFSFHQRVTLREHL 284
Query: 309 TQIQSSLNGG 318
+++++L GG
Sbjct: 285 ERLRAALRGG 294
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 131 bits (329), Expect = 2e-30
Identities = 62/64 (96%), Positives = 62/64 (96%)
Query: 532 GGAKNYAESDHSEDEDNDNNSATTEESTKKNKKKPPKKTSRYERTDTGEITSYITEDDVV 591
GGAKNYAESDHSEDEDNDNNSAT EESTKKNKKKPPKK SRYERTDTGEITSYITEDDVV
Sbjct: 45 GGAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVV 104
Query: 592 YRPG 595
YRPG
Sbjct: 105 YRPG 108
Score = 40.8 bits (94), Expect = 0.004
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 56 PSAPRPVPALPSSPS-PPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPH 114
PS+P P L S + PPPP P Q Q P Q PF GP
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA------------QHPFVPGGPP 1045
Query: 115 RSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGD---------------DDDNDEE 159
+ PG + PC GG + G DD + E
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 160 QPPPLP 165
PPP P
Sbjct: 1106 SPPPPP 1111
Score = 30.8 bits (68), Expect = 3.9
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 325 LPQASTVHPKSPPRV-----PSPHPKPALLTLSLHFKPQDRTAALSP-HPQSPLRAPKPP 378
+ QA +HP+ PP PSPHP LT S +P + A P H Q P P P
Sbjct: 800 IQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG-QPSAPSHAQPPLHGQGP---PGPH 855
Query: 379 DLRLAPLGQ 387
L+ PL Q
Sbjct: 856 SLQAGPLLQ 864
Score = 29.6 bits (65), Expect = 8.6
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 57 SAPRPVPALPS-SPSPP----PPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
SAP P LP+ P+P PP P+A++ Q P + + P P R
Sbjct: 753 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 112 GPH 114
PH
Sbjct: 813 SPH 815
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 131 bits (329), Expect = 2e-30
Identities = 62/64 (96%), Positives = 62/64 (96%)
Query: 532 GGAKNYAESDHSEDEDNDNNSATTEESTKKNKKKPPKKTSRYERTDTGEITSYITEDDVV 591
GGAKNYAESDHSEDEDNDNNSAT EESTKKNKKKPPKK SRYERTDTGEITSYITEDDVV
Sbjct: 45 GGAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVV 104
Query: 592 YRPG 595
YRPG
Sbjct: 105 YRPG 108
Score = 40.8 bits (94), Expect = 0.004
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 56 PSAPRPVPALPSSPS-PPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPH 114
PS+P P L S + PPPP P Q Q P Q PF GP
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA------------QHPFVPGGPP 1045
Query: 115 RSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGD---------------DDDNDEE 159
+ PG + PC GG + G DD + E
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 160 QPPPLP 165
PPP P
Sbjct: 1106 SPPPPP 1111
Score = 30.8 bits (68), Expect = 3.9
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 325 LPQASTVHPKSPPRV-----PSPHPKPALLTLSLHFKPQDRTAALSP-HPQSPLRAPKPP 378
+ QA +HP+ PP PSPHP LT S +P + A P H Q P P P
Sbjct: 800 IQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG-QPSAPSHAQPPLHGQGP---PGPH 855
Query: 379 DLRLAPLGQ 387
L+ PL Q
Sbjct: 856 SLQAGPLLQ 864
Score = 29.6 bits (65), Expect = 8.6
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 57 SAPRPVPALPS-SPSPP----PPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
SAP P LP+ P+P PP P+A++ Q P + + P P R
Sbjct: 753 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 112 GPH 114
PH
Sbjct: 813 SPH 815
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 66.2 bits (160), Expect = 8e-11
Identities = 39/62 (62%), Positives = 41/62 (66%), Gaps = 9/62 (14%)
Query: 289 MSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGH----LPG----LPQASTVHPKSPPRVP 340
M+SNH AFSFHQKQVL QELTQIQSSLNGGGGH PG LP H K PR
Sbjct: 1 MASNHPAFSFHQKQVLRQELTQIQSSLNGGGGHGGKGAPGPGGALPTCPACH-KITPRTE 59
Query: 341 SP 342
+P
Sbjct: 60 AP 61
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 45.1 bits (105), Expect = 2e-04
Identities = 52/191 (27%), Positives = 65/191 (34%), Gaps = 45/191 (23%)
Query: 4 GTRHNHGRRTGRLSQSAREGGGWARP-------ARAARRGGHP--AHFCWSRP--PVSRE 52
G + R +G S S G GW P R+ GG P AH +P P R
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345
Query: 53 RDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRG 112
RD +A P P SP P R P+ R R A +R R R
Sbjct: 346 RDKAAAAAPTPPARGKESPSP-------------RSAPSSQGRGGRAAGGAGRRRRRRRR 392
Query: 113 PHRSLGCDAAPAALGNGRP---------------GARSDRPCGAGGDGGGRLPGDDDDND 157
RS +AP G RP + SD G G G G PG + +
Sbjct: 393 RRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHG 452
Query: 158 ------EEQPP 162
+E+PP
Sbjct: 453 GHGKRAKERPP 463
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 44.7 bits (104), Expect = 3e-04
Identities = 41/137 (29%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 45 SRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPS-------AAREQQGRQVPAGSLRDC 97
SR P+ + D + P P+ LP P PPPP R+ S ++ + GS R+
Sbjct: 514 SRGPLDEDGTDEALPPPLAPLP--PPPPPPARKGSYVSAFRPVVKDTESIAKLYGSAREA 571
Query: 98 RLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGD------GGGRLPG 151
A P RG GP G +P L G S P D R P
Sbjct: 572 YGAG-----PARGPGPGAGSGGYVSPDFLSEGSSSYNSASPDVDTADEPEVDVESNRFP- 625
Query: 152 DDDDNDEEQPPPLPLTG 168
DD+D EE P P G
Sbjct: 626 DDEDAQEETEPSAPSAG 642
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 43.9 bits (102), Expect = 4e-04
Identities = 49/179 (27%), Positives = 67/179 (37%), Gaps = 14/179 (7%)
Query: 306 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 365
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 366 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 421
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 422 L---LLEKEGAVAMPEAAGEVNIARHRPSPSEL-LTPYRWRPCLGPVLLGACARDVAVR 476
L + + A G + P P +L L Y LGP LL A A A R
Sbjct: 317 LKNHMKVHASKLGPLRAPGPASGPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAER 372
Score = 29.6 bits (65), Expect = 8.6
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 4 GTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVP 63
G+ H +R R +S G P ++RG P P + + S+PRP
Sbjct: 539 GSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP-- 596
Query: 64 ALPSSPSPPPPVRRPSAARE--QQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
PSS + P R+P++ + GR A L D L + P G HR L C
Sbjct: 597 --PSSGAGPGSRRKPASPGRTLRNGRGGEAEPL-DLSLRAGPGGEAGPGGALHRCLFCPF 653
Query: 122 APAA 125
A A
Sbjct: 654 ATGA 657
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 43.9 bits (102), Expect = 4e-04
Identities = 49/179 (27%), Positives = 67/179 (37%), Gaps = 14/179 (7%)
Query: 306 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 365
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 366 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 421
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 422 L---LLEKEGAVAMPEAAGEVNIARHRPSPSEL-LTPYRWRPCLGPVLLGACARDVAVR 476
L + + A G + P P +L L Y LGP LL A A A R
Sbjct: 317 LKNHMKVHASKLGPLRAPGPASGPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAER 372
Score = 29.6 bits (65), Expect = 8.6
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 4 GTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVP 63
G+ H +R R +S G P ++RG P P + + S+PRP
Sbjct: 539 GSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP-- 596
Query: 64 ALPSSPSPPPPVRRPSAARE--QQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
PSS + P R+P++ + GR A L D L + P G HR L C
Sbjct: 597 --PSSGAGPGSRRKPASPGRTLRNGRGGEAEPL-DLSLRAGPGGEAGPGGALHRCLFCPF 653
Query: 122 APAA 125
A A
Sbjct: 654 ATGA 657
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 43.9 bits (102), Expect = 4e-04
Identities = 49/179 (27%), Positives = 67/179 (37%), Gaps = 14/179 (7%)
Query: 306 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 365
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 366 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 421
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 422 L---LLEKEGAVAMPEAAGEVNIARHRPSPSEL-LTPYRWRPCLGPVLLGACARDVAVR 476
L + + A G + P P +L L Y LGP LL A A A R
Sbjct: 317 LKNHMKVHASKLGPLRAPGPASGPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAER 372
Score = 29.6 bits (65), Expect = 8.6
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 4 GTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVP 63
G+ H +R R +S G P ++RG P P + + S+PRP
Sbjct: 539 GSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRP-- 596
Query: 64 ALPSSPSPPPPVRRPSAARE--QQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
PSS + P R+P++ + GR A L D L + P G HR L C
Sbjct: 597 --PSSGAGPGSRRKPASPGRTLRNGRGGEAEPL-DLSLRAGPGGEAGPGGALHRCLFCPF 653
Query: 122 APAA 125
A A
Sbjct: 654 ATGA 657
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/139 (32%), Positives = 55/139 (39%), Gaps = 19/139 (13%)
Query: 36 GGHPAHFCWSRPPVSRERDDPSAPRPVPALPS-SPSPPPPVRRPSAAREQQGRQVPA-GS 93
GG H SR P +R PA P+ SP PP RP+ R Q VPA G+
Sbjct: 15 GGQGRHRHSSRAPGTR----------TPATPARSPRPPLCAPRPAPGRAQS--PVPAAGA 62
Query: 94 LRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGAR---SDRPCGAGGDGGGRLP 150
+ A+ P + RG P + G G +P R S RP GG G GR
Sbjct: 63 VPSPPAAAHPARPALRGETP--APGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG 120
Query: 151 GDDDDNDEEQPPPLPLTGR 169
N + PP P GR
Sbjct: 121 KGPPPNPSRRLPPAPPGGR 139
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 42.0 bits (97), Expect = 0.002
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 11 RRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPS 70
RR+ LS R+G +R R AR P +R PS P P P + S
Sbjct: 651 RRSPSLSSKHRKGSSPSRSTREARS------------PQPNKRHSPS---PRPRAPQTSS 695
Query: 71 PPPPVRRPSAAREQQGRQVPAGSLRDCRLAS 101
PPPVRR A+ Q RQ P+ S R R S
Sbjct: 696 SPPPVRR-GASSSPQRRQSPSPSTRPIRRVS 725
Score = 33.1 bits (74), Expect = 0.78
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 28 RPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGR 87
R + + RR P +S P + R ++P P P +SPSPPP RR S + + R
Sbjct: 588 RRSPSPRRYSPPIQRRYSPSPPPKRRT--ASPPPPPKRRASPSPPPK-RRVSHSPPPKQR 644
Query: 88 QVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGDGGG 147
P R L+S + +G P RS +P P R P +
Sbjct: 645 SSPVTKRRSPSLSS----KHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPV 700
Query: 148 RLPGDDDDNDEEQPPP 163
R + P P
Sbjct: 701 RRGASSSPQRRQSPSP 716
Score = 32.3 bits (72), Expect = 1.3
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 47 PPVSRERDDPSAPRPVPALPSSPSPPPPVRRPS 79
PP +R R PS P P P +P+PPP R PS
Sbjct: 552 PPPTRRRRSPS-PAPPPRRRRTPTPPPRRRTPS 583
Score = 30.4 bits (67), Expect = 5.0
Identities = 28/89 (31%), Positives = 32/89 (35%), Gaps = 17/89 (19%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR 60
+G RH+ R S S R+ P RR P PP R R AP
Sbjct: 517 VGRRRRHSPSRSA---SPSPRKRQKETSPRGRRRRSPSP-------PPTRRRRSPSPAPP 566
Query: 61 P-------VPALPSSPSPPPPVRRPSAAR 82
P P +PSPPP R PS R
Sbjct: 567 PRRRRTPTPPPRRRTPSPPPRRRSPSPRR 595
Score = 30.0 bits (66), Expect = 6.6
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 6 RHNHGR---RTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPV 62
RH R R R S ++ G + + +R S PP R PSA P
Sbjct: 337 RHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPR 396
Query: 63 PA-LPSSPSPPPPVRRPSAAREQQGR 87
PS P+ PPP R S +Q R
Sbjct: 397 RRHRPSPPATPPPKTRHSPTPQQSNR 422
Score = 29.6 bits (65), Expect = 8.6
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 323 PGLPQASTVHPKSPPR--VPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDL 380
P P P PPR PSP P+ + + P R + SP P+ +P PP
Sbjct: 563 PAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPK 622
Query: 381 RLA 383
R A
Sbjct: 623 RRA 625
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 26/100 (26%)
Query: 23 GGGWARPARAARRGGHPAHFCWSRPP--VSRERD---------DPSAPRPVPALPSSPSP 71
GG W P RG A +SRPP V R R P AP P PALP+ P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP 71
Query: 72 PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
P RE + R VPA R A P +RP G+
Sbjct: 72 P---------RENRKRAVPA------RAARGPPKRPAGGQ 96
Score = 30.0 bits (66), Expect = 6.6
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Query: 21 REGGGWARPARAARRGGHPAHFCWSRP-----PVSRERDDPSAPRPVPALPSSPSPPPPV 75
RE A PARAAR G P + ER P PR P P P P P
Sbjct: 73 RENRKRAVPARAAR--GPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGR 130
Query: 76 RR------PSAAREQQGR 87
R+ P RE+ GR
Sbjct: 131 RKSLYEAAPLLTREKGGR 148
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 26/100 (26%)
Query: 23 GGGWARPARAARRGGHPAHFCWSRPP--VSRERD---------DPSAPRPVPALPSSPSP 71
GG W P RG A +SRPP V R R P AP P PALP+ P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP 71
Query: 72 PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
P RE + R VPA R A P +RP G+
Sbjct: 72 P---------RENRKRAVPA------RAARGPPKRPAGGQ 96
Score = 30.0 bits (66), Expect = 6.6
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Query: 21 REGGGWARPARAARRGGHPAHFCWSRP-----PVSRERDDPSAPRPVPALPSSPSPPPPV 75
RE A PARAAR G P + ER P PR P P P P P
Sbjct: 73 RENRKRAVPARAAR--GPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGR 130
Query: 76 RR------PSAAREQQGR 87
R+ P RE+ GR
Sbjct: 131 RKSLYEAAPLLTREKGGR 148
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 26/100 (26%)
Query: 23 GGGWARPARAARRGGHPAHFCWSRPP--VSRERD---------DPSAPRPVPALPSSPSP 71
GG W P RG A +SRPP V R R P AP P PALP+ P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP 71
Query: 72 PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
P RE + R VPA R A P +RP G+
Sbjct: 72 P---------RENRKRAVPA------RAARGPPKRPAGGQ 96
Score = 30.8 bits (68), Expect = 3.9
Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 21 REGGGWARPARAARRGGHPAHFCWSRP-----PVSRERDDPSAPRPVPALPSSPSPPPPV 75
RE A PARAAR G P + ER P PR P P P P P
Sbjct: 73 RENRKRAVPARAAR--GPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGR 130
Query: 76 RR------PSAAREQQGRQVPAGSLRD 96
R+ P RE+ GR G D
Sbjct: 131 RKSLYEAAPLLTREKGGRSGRRGDRGD 157
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 41.6 bits (96), Expect = 0.002
Identities = 47/155 (30%), Positives = 56/155 (36%), Gaps = 35/155 (22%)
Query: 12 RTGRLSQSAREGGG----WARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPS 67
R LS+ R G + R A R G P SR R + S P PA
Sbjct: 30 RVAELSERKRRGSSLCSYYGRSAAGPRAGAQQP----LPQPQSRPRQEQSPP---PARQD 82
Query: 68 SPSPPPPVRRP--SAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAA 125
PP P P ++ R +Q P PLQ+ RGR P + G APAA
Sbjct: 83 LQGPPLPEAAPGITSFRSSPWQQPP------------PLQQRRRGREPEGATGLPGAPAA 130
Query: 126 LG------NGRPGARSDRPCGA----GGDGGGRLP 150
G G G R D G+ GDGG P
Sbjct: 131 EGEPEEEDGGAAGQRRDGRPGSSHNGSGDGGAAAP 165
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.004
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 50 SRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPL--QRP 107
S R P+AP P P S+ + P P +AAR GR GS R RP
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 108 FRGRG---PHRSLGCDAAPAALG----------NGRPGARSD-RPCGAGGDGGG------ 147
R G P C AAP RPG+ + R CG G GGG
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAA 234
Query: 148 RLPGDDDDNDEEQP 161
P D +D QP
Sbjct: 235 SSPSADFSSDSPQP 248
>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 40.8 bits (94), Expect = 0.004
Identities = 43/123 (34%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 25 GWARPARAARRGGHPAHFCWSRPP---VSRERDDPSAPRPVPALPSSPSP-PPPVRRPSA 80
G ARP ++ G H SRPP ++ D PRPVP LP + P P +RRPS
Sbjct: 24 GKARPPSSS--GDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELRRPST 81
Query: 81 AREQ-------QGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGA 133
+Q + R PA L A PL P GR +RS + P N RP A
Sbjct: 82 VPDQPPATDNRRSRMAPA--LSTVCGAHRPLAPP-PGRAANRSRQRQSTPHRPANWRPYA 138
Query: 134 RSD 136
D
Sbjct: 139 LDD 141
>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 40.8 bits (94), Expect = 0.004
Identities = 43/123 (34%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 25 GWARPARAARRGGHPAHFCWSRPP---VSRERDDPSAPRPVPALPSSPSP-PPPVRRPSA 80
G ARP ++ G H SRPP ++ D PRPVP LP + P P +RRPS
Sbjct: 24 GKARPPSSS--GDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELRRPST 81
Query: 81 AREQ-------QGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGA 133
+Q + R PA L A PL P GR +RS + P N RP A
Sbjct: 82 VPDQPPATDNRRSRMAPA--LSTVCGAHRPLAPP-PGRAANRSRQRQSTPHRPANWRPYA 138
Query: 134 RSD 136
D
Sbjct: 139 LDD 141
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.004
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 50 SRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPL--QRP 107
S R P+AP P P S+ + P P +AAR GR GS R RP
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 108 FRGRG---PHRSLGCDAAPAALG----------NGRPGARSD-RPCGAGGDGGG------ 147
R G P C AAP RPG+ + R CG G GGG
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAA 234
Query: 148 RLPGDDDDNDEEQP 161
P D +D QP
Sbjct: 235 SSPSADFSSDSPQP 248
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.004
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 50 SRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPL--QRP 107
S R P+AP P P S+ + P P +AAR GR GS R RP
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 108 FRGRG---PHRSLGCDAAPAALG----------NGRPGARSD-RPCGAGGDGGG------ 147
R G P C AAP RPG+ + R CG G GGG
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAA 234
Query: 148 RLPGDDDDNDEEQP 161
P D +D QP
Sbjct: 235 SSPSADFSSDSPQP 248
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 40.8 bits (94), Expect = 0.004
Identities = 52/155 (33%), Positives = 55/155 (35%), Gaps = 17/155 (10%)
Query: 4 GTRHNHGRRT-GRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPV 62
G R HG RT G AR G G RPA R P S R R RP
Sbjct: 30 GPRERHGPRTPGGQLPGARRGPGPRRPAPLPAR---PPGALGSVLRPLRARPGCRPRRPH 86
Query: 63 PALPSSP-SPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
PA P P P RR R G + GS + P RP GR +L A
Sbjct: 87 PAARCLPLRPHRPTRRH---RRPGGFPLAWGSPQ-------PAPRPAPGRSSALALAGGA 136
Query: 122 APAALGNGRPGARSDR--PCGAGGDGGGRLPGDDD 154
AP RPG R P G G GG G D
Sbjct: 137 APGVARAQRPGGSGGRSHPGGPGSPRGGGTVGPGD 171
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 40.8 bits (94), Expect = 0.004
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 56 PSAPRPVPALPSSPS-PPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPH 114
PS+P P L S + PPPP P Q Q P Q PF GP
Sbjct: 444 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA------------QHPFVPGGPP 491
Query: 115 RSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGD---------------DDDNDEE 159
+ PG + PC GG + G DD + E
Sbjct: 492 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 551
Query: 160 QPPPLP 165
PPP P
Sbjct: 552 SPPPPP 557
Score = 30.8 bits (68), Expect = 3.9
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 325 LPQASTVHPKSPPRV-----PSPHPKPALLTLSLHFKPQDRTAALSP-HPQSPLRAPKPP 378
+ QA +HP+ PP PSPHP LT S +P + A P H Q P P P
Sbjct: 246 IQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG-QPSAPSHAQPPLHGQGP---PGPH 301
Query: 379 DLRLAPLGQ 387
L+ PL Q
Sbjct: 302 SLQAGPLLQ 310
Score = 29.6 bits (65), Expect = 8.6
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 57 SAPRPVPALPS-SPSPP----PPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
SAP P LP+ P+P PP P+A++ Q P + + P P R
Sbjct: 199 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 258
Query: 112 GPH 114
PH
Sbjct: 259 SPH 261
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 40.4 bits (93), Expect = 0.005
Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 14/85 (16%)
Query: 10 GRRTGRLSQSAREGGGWARPARAARRGGHP--AHFCW----------SRPPVSRERDDPS 57
G R+ QSA RP HP AH W RPP ++ R PS
Sbjct: 224 GSNALRMIQSATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPS 283
Query: 58 APRPVPALPS--SPSPPPPVRRPSA 80
P P P PS P PPPP PS+
Sbjct: 284 PPPPPPPPPSPLPPPPPPPPPTPSS 308
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 40.4 bits (93), Expect = 0.005
Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 14/85 (16%)
Query: 10 GRRTGRLSQSAREGGGWARPARAARRGGHP--AHFCW----------SRPPVSRERDDPS 57
G R+ QSA RP HP AH W RPP ++ R PS
Sbjct: 290 GSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPS 349
Query: 58 --APRPVPALPSSPSPPPPVRRPSA 80
P P PA P P PPPP PS+
Sbjct: 350 PPPPPPPPASPLPPPPPPPPPTPSS 374
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 40.4 bits (93), Expect = 0.005
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 37 GHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRD 96
GHP+ + PVS P P PVP P+ +PPPP P+ + + S
Sbjct: 169 GHPSSA--ASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLA 226
Query: 97 CRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGDGG 146
+A L+R R DA+ + +G + ++R GG GG
Sbjct: 227 AAIAGAKLRRVQRPE--------DASGGSSPSGTSKSDANRASSGGGGGG 268
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 40.0 bits (92), Expect = 0.006
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 42/161 (26%)
Query: 2 GLGTRHNHGRRTGRLSQSAREGGGWARPARAARR--GGHPAHFCWSRPPVSRERD----- 54
GLG + RR +Q ARP R R GG P CW R R
Sbjct: 138 GLGDKGPRSRRAAEFTQ--------ARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAER 189
Query: 55 ---DPSAPRPVPA-LPSSPSP-----PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQ 105
P+ P+PA P PSP P P +RP +R Q RL LP +
Sbjct: 190 AGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQ------------WRL--LPRR 235
Query: 106 RPFRGRGPHRSLGCDAAPAALGNGR----PGARSDRPCGAG 142
RP R G S A A G+G A RP AG
Sbjct: 236 RPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAG 276
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,241,386
Number of Sequences: 37866
Number of extensions: 1972833
Number of successful extensions: 21869
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 689
Number of HSP's that attempted gapping in prelim test: 16584
Number of HSP's gapped (non-prelim): 5102
length of query: 618
length of database: 18,247,518
effective HSP length: 108
effective length of query: 510
effective length of database: 14,157,990
effective search space: 7220574900
effective search space used: 7220574900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.