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Search of human proteins with 239744491
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo
sapiens]
(471 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo ... 966 0.0
gi|239755656 PREDICTED: hypothetical protein [Homo sapiens] 910 0.0
gi|239750182 PREDICTED: hypothetical protein [Homo sapiens] 910 0.0
gi|169213922 PREDICTED: hypothetical protein isoform 1 [Homo sap... 39 0.013
gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo sap... 39 0.013
gi|169214343 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|169213300 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|148727255 microtubule associated serine/threonine kinase fami... 37 0.039
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 36 0.066
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.066
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 36 0.086
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.15
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.15
gi|239756978 PREDICTED: hypothetical protein XP_002345135 [Homo ... 35 0.19
gi|57864582 hornerin [Homo sapiens] 34 0.25
gi|239755730 PREDICTED: hypothetical protein [Homo sapiens] 33 0.56
gi|239750246 PREDICTED: hypothetical protein [Homo sapiens] 33 0.56
gi|239744546 PREDICTED: hypothetical protein XP_002343181 [Homo ... 33 0.56
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 33 0.73
gi|17978466 cyclin T1 [Homo sapiens] 33 0.73
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 32 0.95
gi|167234429 zinc finger and BTB domain containing 17 [Homo sapi... 32 0.95
gi|239754026 PREDICTED: hypothetical protein [Homo sapiens] 32 1.2
gi|239748557 PREDICTED: hypothetical protein XP_002346722 [Homo ... 32 1.2
gi|239742540 PREDICTED: hypothetical protein XP_002342571 [Homo ... 32 1.2
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 32 1.2
gi|195972913 nasal embryonic LHRH factor isoform d [Homo sapiens] 32 1.6
gi|195972911 nasal embryonic LHRH factor isoform c [Homo sapiens] 32 1.6
gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens] 32 1.6
gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens] 32 1.6
>gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo
sapiens]
Length = 471
Score = 966 bits (2498), Expect = 0.0
Identities = 471/471 (100%), Positives = 471/471 (100%)
Query: 1 MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL 60
MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL
Sbjct: 1 MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL 60
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT 120
TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT
Sbjct: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT 120
Query: 121 GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA 180
GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA
Sbjct: 121 GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA 180
Query: 181 HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV 240
HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV
Sbjct: 181 HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV 240
Query: 241 GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD
Sbjct: 241 GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
Query: 301 KGVIELRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPRE 360
KGVIELRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPRE
Sbjct: 301 KGVIELRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPRE 360
Query: 361 GLRPASANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRR 420
GLRPASANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRR
Sbjct: 361 GLRPASANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRR 420
Query: 421 WYSRRSSSLSLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL 471
WYSRRSSSLSLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL
Sbjct: 421 WYSRRSSSLSLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL 471
>gi|239755656 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 910 bits (2352), Expect = 0.0
Identities = 457/522 (87%), Positives = 463/522 (88%), Gaps = 51/522 (9%)
Query: 1 MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL 60
MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL
Sbjct: 1 MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL 60
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT 120
TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT
Sbjct: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT 120
Query: 121 GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA 180
GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA
Sbjct: 121 GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA 180
Query: 181 HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV 240
HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV
Sbjct: 181 HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV 240
Query: 241 GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD
Sbjct: 241 GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
Query: 301 KG---VIELRL------------------ELGVE-------------------------- 313
KG V+ + L E+G +
Sbjct: 301 KGGWVVLAMPLWAWKTRPQGHALYGAGPGEIGTDPGVRQQCPLCLPLSLQQCPLHFGLGA 360
Query: 314 ----RLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA 369
+ +LLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA
Sbjct: 361 DTRVPIKAADLLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA 420
Query: 370 AVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRRSSSL 429
AVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRRSSSL
Sbjct: 421 AVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRRSSSL 480
Query: 430 SLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL 471
SLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL
Sbjct: 481 SLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL 522
>gi|239750182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 910 bits (2352), Expect = 0.0
Identities = 457/522 (87%), Positives = 463/522 (88%), Gaps = 51/522 (9%)
Query: 1 MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL 60
MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL
Sbjct: 1 MCSPTHCPQTFGEGLRPRVATLSWEEEEEEPEEEGRGPLRVRGRGLVASPSILERGYLQL 60
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT 120
TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT
Sbjct: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGT 120
Query: 121 GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA 180
GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA
Sbjct: 121 GHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLSKMGCEKEALARTAKSLAEKWA 180
Query: 181 HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV 240
HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV
Sbjct: 181 HCPRTEAQEPQDQHPYIPMLPFKHSQLLLLLRAQNGRVKEEWEPGDCVTGLQQHAAGNEV 240
Query: 241 GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD
Sbjct: 241 GHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
Query: 301 KG---VIELRL------------------ELGVE-------------------------- 313
KG V+ + L E+G +
Sbjct: 301 KGGWVVLAMPLWAWKTRPQGHALYGAGPGEIGTDPGVRQQCPLCLPLSLQQCPLHFGLGA 360
Query: 314 ----RLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA 369
+ +LLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA
Sbjct: 361 DTRVPIKAADLLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA 420
Query: 370 AVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRRSSSL 429
AVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRRSSSL
Sbjct: 421 AVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRRSSSL 480
Query: 430 SLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL 471
SLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL
Sbjct: 481 SLISVMLFFRSLVTGTRKSPLESFLWTQGLWQGEAPVREPRL 522
>gi|169213922 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 198
Score = 38.5 bits (88), Expect = 0.013
Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 43/187 (22%)
Query: 246 LAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIE 305
++ R S+ LLR + W AS+ R CW SS + S A+ SF S + +
Sbjct: 1 MSSTRGSNQLLRRA-WKASA-------CRRICWACSSSLARTS---ATCSFTSSRRSRVR 49
Query: 306 LRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPA 365
L + R S + + E ++ + R +T G P R R LRP
Sbjct: 50 LPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRG--------PRRSRMALRPR 101
Query: 366 SANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRR 425
SA P+ P Y+A RF RSS S RSR RRW +RR
Sbjct: 102 SA------------PSRAPA---WYTARRF------CRSSAS---RRSRLRSLRRWEARR 137
Query: 426 SSSLSLI 432
+ S S++
Sbjct: 138 TRSSSVL 144
>gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 198
Score = 38.5 bits (88), Expect = 0.013
Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 43/187 (22%)
Query: 246 LAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIE 305
++ R S+ LLR + W AS+ R CW SS + S A+ SF S + +
Sbjct: 1 MSSTRGSNQLLRRA-WKASA-------CRRICWACSSSLARTS---ATCSFTSSRRSRVR 49
Query: 306 LRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPA 365
L + R S + + E ++ + R +T G P R R LRP
Sbjct: 50 LPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRG--------PRRSRMALRPR 101
Query: 366 SANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRR 425
SA P+ P Y+A RF RSS S RSR RRW +RR
Sbjct: 102 SA------------PSRAPA---WYTARRF------CRSSAS---RRSRLRSLRRWEARR 137
Query: 426 SSSLSLI 432
+ S S++
Sbjct: 138 TRSSSVL 144
>gi|169214343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 198
Score = 38.5 bits (88), Expect = 0.013
Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 43/187 (22%)
Query: 246 LAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIE 305
++ R S+ LLR + W AS+ R CW SS + S A+ SF S + +
Sbjct: 1 MSSTRGSNQLLRRA-WKASA-------CRRICWACSSSLARTS---ATCSFTSSRRSRVR 49
Query: 306 LRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPA 365
L + R S + + E ++ + R +T G P R R LRP
Sbjct: 50 LPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRG--------PRRSRMALRPR 101
Query: 366 SANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRR 425
SA P+ P Y+A RF RSS S RSR RRW +RR
Sbjct: 102 SA------------PSRAPA---WYTARRF------CRSSAS---RRSRLRSLRRWEARR 137
Query: 426 SSSLSLI 432
+ S S++
Sbjct: 138 TRSSSVL 144
>gi|169213300 PREDICTED: hypothetical protein [Homo sapiens]
Length = 198
Score = 38.5 bits (88), Expect = 0.013
Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 43/187 (22%)
Query: 246 LAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIE 305
++ R S+ LLR + W AS+ R CW SS + S A+ SF S + +
Sbjct: 1 MSSTRGSNQLLRRA-WKASA-------CRRICWACSSSLARTS---ATCSFTSSRRSRVR 49
Query: 306 LRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPA 365
L + R S + + E ++ + R +T G P R R LRP
Sbjct: 50 LPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRG--------PRRSRMALRPR 101
Query: 366 SANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRR 425
SA P+ P Y+A RF RSS S RSR RRW +RR
Sbjct: 102 SA------------PSRAPA---WYTARRF------CRSSAS---RRSRLRSLRRWEARR 137
Query: 426 SSSLSLI 432
+ S S++
Sbjct: 138 TRSSSVL 144
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 37.0 bits (84), Expect = 0.039
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 225 GDCVTGLQQHAAGNEVGHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSK 284
GD +T + V HT ++ +L S + + P + S T +R N + S+
Sbjct: 1002 GDLITHINGEPVHGLV-HTEVIELLLKSGNKVSITTTPFENTSIKTGPARRNSYKSRM-- 1058
Query: 285 SFVSVSRASASFNDSDKGVIELRLELGVERLAGLPV-LLHSSLRFSSSERSILSHRRWVA 343
V R+ S K +E R L ++LA P LLH+S FS RS+ S
Sbjct: 1059 ----VRRSKKS---KKKESLERRRSL-FKKLAKQPSPLLHTSRSFSCLNRSLSSGESLPG 1110
Query: 344 TPGSSLLRPEAPARPREGLRPASANAAVASPMLGSSPASGPPSARLYSAH 393
+P SL +P P R + + SSP+S P++ S H
Sbjct: 1111 SPTHSL----SPRSPTPSYRSTPDFPSGTNSSQSSSPSSSAPNSPAGSGH 1156
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 36.2 bits (82), Expect = 0.066
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 120 TGHSPWAGPE----PRGQGPLTPHQPGQELETGGGRW-RHHQGLSKMGCEKEALARTAKS 174
+G SPW GP+ G P +P L G G W R G K A A +
Sbjct: 162 SGSSPWRGPQGSLCKSGLCCAHPVRPAGHLACGAGIWTRAQAGPHKRAVGAAAGAAQSSG 221
Query: 175 LAEKWAHCPRTEAQEPQDQHPYIP 198
L KW C +P QHP P
Sbjct: 222 LFSKWVPC------QPLSQHPTGP 239
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.066
Identities = 29/125 (23%), Positives = 58/125 (46%)
Query: 262 PASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIELRLELGVERLAGLPVL 321
PA R SS+ S S+ +S SS S S S + +S +DS+ + ++ E+ ++R+
Sbjct: 2526 PAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA 2585
Query: 322 LHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANAAVASPMLGSSPA 381
++R + R+ ++ SS + + +S++++ +S SS +
Sbjct: 2586 PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2645
Query: 382 SGPPS 386
S PS
Sbjct: 2646 SSSPS 2650
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 35.8 bits (81), Expect = 0.086
Identities = 41/138 (29%), Positives = 50/138 (36%), Gaps = 13/138 (9%)
Query: 250 RSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIELRLE 309
R +A R SP P ++R S + R+ + SS SV A G L
Sbjct: 110 RGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVP---ARRLPPPCGGTSLGAG 166
Query: 310 LGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPASANA 369
R G L RS S RRW A PG RP AP G A+ A
Sbjct: 167 SRALRRPGSAAL----------PRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPA 216
Query: 370 AVASPMLGSSPASGPPSA 387
A AS +G P+A
Sbjct: 217 AAASVAPPPPAVAGAPAA 234
>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 35.0 bits (79), Expect = 0.15
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 120 TGHSPWAGPE----PRGQGPLTPHQPGQELETGGGRW-RHHQGLSKMGCEKEALARTAKS 174
+G SPW GP+ G P +P + G G W R G K A A +
Sbjct: 162 SGSSPWRGPQGSLCKSGLCCAHPVRPAGHVACGAGIWTRAQAGPHKRAVGAAAGAAQSSG 221
Query: 175 LAEKWAHCPRTEAQEPQDQHPYIP 198
L KW C +P QHP P
Sbjct: 222 LFSKWVPC------QPLSQHPTGP 239
>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 35.0 bits (79), Expect = 0.15
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 120 TGHSPWAGPE----PRGQGPLTPHQPGQELETGGGRW-RHHQGLSKMGCEKEALARTAKS 174
+G SPW GP+ G P +P + G G W R G K A A +
Sbjct: 162 SGSSPWRGPQGSLCKSGLCCAHPVRPAGHVACGAGIWTRAQAGPHKRAVGAAAGAAQSSG 221
Query: 175 LAEKWAHCPRTEAQEPQDQHPYIP 198
L KW C +P QHP P
Sbjct: 222 LFSKWVPC------QPLSQHPTGP 239
>gi|239756978 PREDICTED: hypothetical protein XP_002345135 [Homo
sapiens]
Length = 187
Score = 34.7 bits (78), Expect = 0.19
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 20/81 (24%)
Query: 14 GLRPRVATLSWEEEEEEPE-----EEG-------RGPLRVRGRGLVASPSILER------ 55
G RPRVA +W EE PE EEG RG R GRG P + R
Sbjct: 63 GQRPRVAAGAWPRSEEGPEVWPRSEEGPGGLAEVRGGARRSGRGPRRGPEVWPRSEEGPG 122
Query: 56 GYLQLTGSFGGQRRGRRVRGG 76
G ++ G G +R GR R G
Sbjct: 123 GLAEVRG--GARRSGRGPRRG 141
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 34.3 bits (77), Expect = 0.25
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 56 GYLQLTGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQT 115
GY Q G RG R G SG+S + G G + SG+ Q + + H S
Sbjct: 2132 GYGQHGSRSGQSSRGER-HGSSSGSSSRYGQHGSGSRQSSGHGRQGSG---SGHSPSRGR 2187
Query: 116 EPAGTGHSPWAGPEPRGQGPLTPHQP 141
+G+GHS G G G + P
Sbjct: 2188 HGSGSGHSSSHGQHGSGSGRSSSRGP 2213
Score = 32.7 bits (73), Expect = 0.73
Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 62 GSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGTG 121
GS GQ G SG S G G + SGY Q + + H +G+
Sbjct: 2020 GSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG---SGQSPGHGQRGSGSR 2076
Query: 122 HSPWAGPEPRGQGPLT---PHQPGQELETGGGRWRHHQGLS 159
SP G G G + H PG +G G HH+ S
Sbjct: 2077 QSPSYGRHGSGSGRSSSSGQHGPGLGESSGFG---HHESSS 2114
Score = 31.6 bits (70), Expect = 1.6
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 20/96 (20%)
Query: 56 GYLQLTGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQT 115
GY Q G RG R G SG+S G G + SG H
Sbjct: 1192 GYGQHGSRSGQSSRGER-HGSSSGSSSHYGQHGSGSRQSSG----------------HGR 1234
Query: 116 EPAGTGHSPWAGPEPRGQGPLTPHQPGQELETGGGR 151
+ +G+GHSP G G G + H GQ +G GR
Sbjct: 1235 QGSGSGHSPSRGRHGSGLGHSSSH--GQH-GSGSGR 1267
Score = 31.2 bits (69), Expect = 2.1
Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
Query: 62 GSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGTG 121
GS GQ G +G S GH+ G + SGY + S +G+G
Sbjct: 1314 GSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAG---SGQSPSRGRHGSGSG 1370
Query: 122 HSPWAGPEPRGQGPLTP---HQPGQELETGGGRWRHHQGLS--KMGC 163
HS G G G + H G +G G HH+ S GC
Sbjct: 1371 HSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFG---HHESSSWQSSGC 1414
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/99 (28%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 62 GSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGTG 121
GS GQ G SG S G G + SGY Q + + H +G+
Sbjct: 1080 GSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG---SGQSPGHGQRGSGSR 1136
Query: 122 HSPWAGPEPRGQG-PLTPHQPGQELETGGGRWRHHQGLS 159
SP G G G + Q G L G + HH+ S
Sbjct: 1137 QSPSYGRHGSGSGRSSSSGQHGSGLGESSG-FGHHESSS 1174
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/99 (28%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 62 GSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGTG 121
GS GQ G SG S G G + SGY Q + + H +G+
Sbjct: 1550 GSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG---SGQSPGHGQRGSGSR 1606
Query: 122 HSPWAGPEPRGQG-PLTPHQPGQELETGGGRWRHHQGLS 159
SP G G G + Q G L G + HH+ S
Sbjct: 1607 QSPSYGRHGSGSGRSSSSGQHGSGLGESSG-FGHHESSS 1644
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/99 (28%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 62 GSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGTG 121
GS GQ G SG S G G + SGY Q + + H +G+
Sbjct: 2490 GSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG---SGQSPGHGQRGSGSR 2546
Query: 122 HSPWAGPEPRGQG-PLTPHQPGQELETGGGRWRHHQGLS 159
SP G G G + Q G L G + HH+ S
Sbjct: 2547 QSPSYGRHGSGSGRSSSSGQHGSGLGESSG-FGHHESSS 2584
Score = 30.0 bits (66), Expect = 4.7
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 56 GYLQLTGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQT 115
GY Q G RG R G SG+S G G + SG+ Q + + S
Sbjct: 2602 GYGQHGSRSGQSSRGER-HGSSSGSSSHYGQHGSGSRQSSGHGRQGSG---SGQSPSRGR 2657
Query: 116 EPAGTGHSPWAGPEPRGQGPLTPHQP 141
+G GHS G G G + P
Sbjct: 2658 HGSGLGHSSSHGQHGSGSGRSSSRGP 2683
Score = 29.6 bits (65), Expect = 6.2
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 62 GSFGGQRRGRRVRGGCSGASPQPGHQLLGKEKQSGYNFQTTDMCYTSHETSHQTEPAGTG 121
GS GQ G +G S GH+ G + SGY + SH +G+G
Sbjct: 2724 GSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAG---SGQSLSHGRHGSGSG 2780
Query: 122 HSPWAGPEPRGQG 134
S G G G
Sbjct: 2781 QSSSYGQHGSGSG 2793
>gi|239755730 PREDICTED: hypothetical protein [Homo sapiens]
Length = 108
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 348 SLLRPEAPARPREGLRPASANAAVASPMLGSSPASGPPSA 387
++L P AP P RP A+ASP + PA GPP+A
Sbjct: 47 AILTPGAPQGPPSSARPECGQNAIASPPI---PARGPPTA 83
>gi|239750246 PREDICTED: hypothetical protein [Homo sapiens]
Length = 108
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 348 SLLRPEAPARPREGLRPASANAAVASPMLGSSPASGPPSA 387
++L P AP P RP A+ASP + PA GPP+A
Sbjct: 47 AILTPGAPQGPPSSARPECGQNAIASPPI---PARGPPTA 83
>gi|239744546 PREDICTED: hypothetical protein XP_002343181 [Homo
sapiens]
Length = 108
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 348 SLLRPEAPARPREGLRPASANAAVASPMLGSSPASGPPSA 387
++L P AP P RP A+ASP + PA GPP+A
Sbjct: 47 AILTPGAPQGPPSSARPECGQNAIASPPI---PARGPPTA 83
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 32.7 bits (73), Expect = 0.73
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 329 SSSERSILSHRRWVATPGSSLLRPEAPARPREGL----RPASANAAVASPMLGSSPASGP 384
+SS ++L+ +++P +S+ PE PA P + PAS AAV +P + + PA+
Sbjct: 1255 TSSAAAVLTPEE-LSSPAASVPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASV 1313
Query: 385 PS 386
P+
Sbjct: 1314 PT 1315
>gi|17978466 cyclin T1 [Homo sapiens]
Length = 726
Score = 32.7 bits (73), Expect = 0.73
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 219 KEEWEPGDCVTGLQQHAAGNEVGHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCW 278
K WE D L+ +E+ H FL + ++ + L R W A + T+
Sbjct: 219 KHWWEYVDATVTLELL---DELTHEFLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTD 275
Query: 279 NSKSSKSFVSVSRASASFNDSDKGVIELRLELGVERLAGLPVLLHSSLRFSSSERSILSH 338
S ++ +++ S+S + + G++ + + LPV SS +S E +L
Sbjct: 276 EKTSEQTILNMISQSSS-DTTIAGLMSMSTST-TSAVPSLPVSEESSSNLTSVE--MLPG 331
Query: 339 RRWVATPGSSLLRPEAPARPREGL 362
+RW+++ S L P R E L
Sbjct: 332 KRWLSSQPSFKLEPTQGHRTSENL 355
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 32.3 bits (72), Expect = 0.95
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 225 GDCVTGLQQHAAGNEVGHTFLLAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSK 284
G C TG + +A + + + SSS+ SS +SS SSS+ S S+ +S SS
Sbjct: 2593 GGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2652
Query: 285 SFVSVSRASASFNDS 299
S S S +S+S + S
Sbjct: 2653 SSSSSSSSSSSSSSS 2667
Score = 32.0 bits (71), Expect = 1.2
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 251 SSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSD 300
SSS+ SS +SS SSS+ S S+ +S SS S S S +S+S D D
Sbjct: 2627 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDED 2676
Score = 30.4 bits (67), Expect = 3.6
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 251 SSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDK 301
SSS+ SS +SS SSS+ S S+ +S SS S S S +S+S + +D+
Sbjct: 2625 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDE 2675
Score = 30.0 bits (66), Expect = 4.7
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 345 PGSSLLRPEAPARP--REGLRPASANAAVASPMLGSSPASGPPS 386
P LL+PEA RP R PA A A+ + G P PP+
Sbjct: 461 PAKELLKPEADPRPCERAPRGPAGPAAQQAAKLFGLEPGRPPPT 504
Score = 29.3 bits (64), Expect = 8.1
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 251 SSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDS 299
SSS+ SS +SS SSS+ S S+ +S SS S S S +S + DS
Sbjct: 2629 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDS 2677
>gi|167234429 zinc finger and BTB domain containing 17 [Homo
sapiens]
Length = 803
Score = 32.3 bits (72), Expect = 0.95
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 25 EEEEEEPEEEGRGPLRVRGRG--LVASPSILERGYLQLTGSFGGQRRGRRVRGGCSG 79
++E+EE EEEG GP V+ G L + E + G+ GQ G RG SG
Sbjct: 234 QKEQEEQEEEGAGPAEVKEEGSQLENGEAPEENENEESAGTDSGQELGSEARGLRSG 290
>gi|239754026 PREDICTED: hypothetical protein [Homo sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 1.2
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 67 QRRGRRVRGGCSGAS----------PQPGHQLLGKE--KQSGYNFQTTDMCYTSHETSHQ 114
QRRG C+GA PQ G Q G+ +NF + + H
Sbjct: 266 QRRGGAAVRACAGALSCEALRTNELPQEGAQSGGESFILMPNFNF----LSFLFHPCLE- 320
Query: 115 TEPAGTGHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLS 159
EPA PWAG PRG G + G G R R + L+
Sbjct: 321 -EPAAGDSDPWAGAGPRGHGRSSLSARGPRWFAGQDRARELRSLA 364
>gi|239748557 PREDICTED: hypothetical protein XP_002346722 [Homo
sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 1.2
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 67 QRRGRRVRGGCSGAS----------PQPGHQLLGKE--KQSGYNFQTTDMCYTSHETSHQ 114
QRRG C+GA PQ G Q G+ +NF + + H
Sbjct: 266 QRRGGAAVRACAGALSCEALRTNELPQEGAQSGGESFILMPNFNF----LSFLFHPCLE- 320
Query: 115 TEPAGTGHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLS 159
EPA PWAG PRG G + G G R R + L+
Sbjct: 321 -EPAAGDSDPWAGAGPRGHGRSSLSARGPRWFAGQDRARELRSLA 364
>gi|239742540 PREDICTED: hypothetical protein XP_002342571 [Homo
sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 1.2
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 67 QRRGRRVRGGCSGAS----------PQPGHQLLGKE--KQSGYNFQTTDMCYTSHETSHQ 114
QRRG C+GA PQ G Q G+ +NF + + H
Sbjct: 266 QRRGGAAVRACAGALSCEALRTNELPQEGAQSGGESFILMPNFNF----LSFLFHPCLE- 320
Query: 115 TEPAGTGHSPWAGPEPRGQGPLTPHQPGQELETGGGRWRHHQGLS 159
EPA PWAG PRG G + G G R R + L+
Sbjct: 321 -EPAAGDSDPWAGAGPRGHGRSSLSARGPRWFAGQDRARELRSLA 364
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 32.0 bits (71), Expect = 1.2
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 284 KSFVSVSRASASFNDSDKGVIELRLELGVERLAGLPVLLHSSLRFSSSE----RSILSHR 339
+ +VS + S ++ L L+ E+L G S FSS + R + +
Sbjct: 1564 RQYVSRPSSLESSRNTSSNSSPLNLKGSSEQLHG------RSESFSSEDLIPSRDLATLP 1617
Query: 340 RWVATPGSSLLRPEAPARPREGLRP--ASANAAVASPMLGSSPASGPPSARLYSAHRFRM 397
R +TPG + L PR G P + A P +G P S PS+ + + F
Sbjct: 1618 REASTPGRNALGRHEYPLPRNGPLPQEGAQKRGTAPPYVGVRPCSASPSSEMVTLEEFLE 1677
Query: 398 VSRR 401
S R
Sbjct: 1678 ESNR 1681
>gi|195972913 nasal embryonic LHRH factor isoform d [Homo sapiens]
Length = 505
Score = 31.6 bits (70), Expect = 1.6
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 12 GEGLRPRVATLSWEEEE-EEPEEEGRGPLRVRGRG----------LVASPSILERGYLQL 60
GEG +PRV T+S E PE E V+GR L ASP +
Sbjct: 94 GEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRP 153
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEK 93
S+ G R+G + GC+ +P P + G ++
Sbjct: 154 CQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQ 186
>gi|195972911 nasal embryonic LHRH factor isoform c [Homo sapiens]
Length = 507
Score = 31.6 bits (70), Expect = 1.6
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 12 GEGLRPRVATLSWEEEE-EEPEEEGRGPLRVRGRG----------LVASPSILERGYLQL 60
GEG +PRV T+S E PE E V+GR L ASP +
Sbjct: 94 GEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRP 153
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEK 93
S+ G R+G + GC+ +P P + G ++
Sbjct: 154 CQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQ 186
>gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens]
Length = 530
Score = 31.6 bits (70), Expect = 1.6
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 12 GEGLRPRVATLSWEEEE-EEPEEEGRGPLRVRGRG----------LVASPSILERGYLQL 60
GEG +PRV T+S E PE E V+GR L ASP +
Sbjct: 94 GEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRP 153
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEK 93
S+ G R+G + GC+ +P P + G ++
Sbjct: 154 CQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQ 186
>gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens]
Length = 528
Score = 31.6 bits (70), Expect = 1.6
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 12 GEGLRPRVATLSWEEEE-EEPEEEGRGPLRVRGRG----------LVASPSILERGYLQL 60
GEG +PRV T+S E PE E V+GR L ASP +
Sbjct: 94 GEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRP 153
Query: 61 TGSFGGQRRGRRVRGGCSGASPQPGHQLLGKEK 93
S+ G R+G + GC+ +P P + G ++
Sbjct: 154 CQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQ 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,574,578
Number of Sequences: 37866
Number of extensions: 1148606
Number of successful extensions: 7571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 7335
Number of HSP's gapped (non-prelim): 276
length of query: 471
length of database: 18,247,518
effective HSP length: 106
effective length of query: 365
effective length of database: 14,233,722
effective search space: 5195308530
effective search space used: 5195308530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.