Search of human proteins with 239744313

Search of human proteins with 239744313

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo
sapiens]
         (456 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo ...   921   0.0  
gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo ...   921   0.0  
gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens]          548   e-156
gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]          380   e-105
gi|71061468 centromere protein E [Homo sapiens]                        35   0.18 
gi|7661858 Rho GTPase activating protein 11A isoform 1 [Homo sap...    34   0.31 
gi|13027602 DDRGK domain containing 1 [Homo sapiens]                   33   0.70 
gi|189217904 RPGRIP1-like isoform b [Homo sapiens]                     32   0.91 
gi|118442834 RPGRIP1-like isoform a [Homo sapiens]                     32   0.91 
gi|31377611 coiled-coil domain containing 148 [Homo sapiens]           32   1.2  
gi|229577185 epidermal growth factor receptor pathway substrate ...    32   1.6  
gi|4503593 epidermal growth factor receptor pathway substrate 15...    32   1.6  
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li...    32   1.6  
gi|217330589 transforming growth factor, beta receptor associate...    31   2.0  
gi|21359865 transforming growth factor, beta receptor associated...    31   2.0  
gi|22726201 inositol polyphosphate multikinase [Homo sapiens]          31   2.0  
gi|34878777 ring finger protein 20 [Homo sapiens]                      31   2.7  
gi|91754185 hypothetical protein LOC254268 [Homo sapiens]              30   3.5  
gi|4506467 radixin [Homo sapiens]                                      30   4.5  
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ...    30   4.5  
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]         30   4.5  
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]         30   4.5  
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]         30   4.5  
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]         30   4.5  
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]         30   4.5  
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]         30   4.5  
gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo...    30   4.5  
gi|116256462 tetratricopeptide repeat domain 39C isoform 2 [Homo...    30   4.5  
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2...    30   4.5  
gi|42794754 acyl-CoA synthetase long-chain family member 3 [Homo...    30   5.9  

>gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo
           sapiens]
          Length = 505

 Score =  921 bits (2381), Expect = 0.0
 Identities = 456/456 (100%), Positives = 456/456 (100%)

Query: 1   MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 60
           MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID
Sbjct: 50  MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 109

Query: 61  ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 120
           ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG
Sbjct: 110 ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 169

Query: 121 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 180
           EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK
Sbjct: 170 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 229

Query: 181 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 240
           NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC
Sbjct: 230 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 289

Query: 241 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ 300
           VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ
Sbjct: 290 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ 349

Query: 301 FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD 360
           FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD
Sbjct: 350 FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD 409

Query: 361 THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV 420
           THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV
Sbjct: 410 THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV 469

Query: 421 KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP 456
           KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP
Sbjct: 470 KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP 505


>gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo
           sapiens]
          Length = 456

 Score =  921 bits (2381), Expect = 0.0
 Identities = 456/456 (100%), Positives = 456/456 (100%)

Query: 1   MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 60
           MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID
Sbjct: 1   MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 60

Query: 61  ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 120
           ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG
Sbjct: 61  ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 120

Query: 121 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 180
           EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK
Sbjct: 121 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 180

Query: 181 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 240
           NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC
Sbjct: 181 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 240

Query: 241 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ 300
           VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ
Sbjct: 241 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ 300

Query: 301 FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD 360
           FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD
Sbjct: 301 FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD 360

Query: 361 THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV 420
           THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV
Sbjct: 361 THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV 420

Query: 421 KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP 456
           KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP
Sbjct: 421 KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP 456


>gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens]
          Length = 336

 Score =  548 bits (1413), Expect = e-156
 Identities = 275/275 (100%), Positives = 275/275 (100%)

Query: 1   MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 60
           MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID
Sbjct: 50  MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 109

Query: 61  ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 120
           ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG
Sbjct: 110 ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 169

Query: 121 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 180
           EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK
Sbjct: 170 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 229

Query: 181 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 240
           NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC
Sbjct: 230 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 289

Query: 241 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRT 275
           VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRT
Sbjct: 290 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRT 324


>gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]
          Length = 225

 Score =  380 bits (975), Expect = e-105
 Identities = 182/186 (97%), Positives = 184/186 (98%)

Query: 271 IFYRTRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA 330
           + +R RHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA
Sbjct: 40  LHFRYRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA 99

Query: 331 HQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKHPKA 390
           HQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKHPKA
Sbjct: 100 HQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKHPKA 159

Query: 391 SAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEKLEIYGGEENVFVG 450
           SAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEKLEIYGGEENVFVG
Sbjct: 160 SAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEKLEIYGGEENVFVG 219

Query: 451 IYIKEP 456
           IYIKEP
Sbjct: 220 IYIKEP 225


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 8    LALYQRLKSAKKYYKQLNLVMNEQKEKITEKVI-LSMTAKEHHKEQEEVSRLIDELQ 63
            L + Q LK+A+   K+    +++ +EKI+EK I +S   K+  K ++E+ + I ELQ
Sbjct: 1920 LEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQ 1976


>gi|7661858 Rho GTPase activating protein 11A isoform 1 [Homo
           sapiens]
          Length = 1023

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 20/108 (18%)

Query: 330 AHQEHGRNLAEEV--LQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKH 387
           A  E G NL   +   Q S +N+G  +L EPS     PE +L ET +LT+   ++  E H
Sbjct: 602 AFSESGSNLHALMNQRQSSVTNVGKVKLTEPSYLEDSPEENLFETNDLTIVESKEKYEHH 661

Query: 388 PKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDY 435
                             GKG + +S R    ++ +   R E  +K Y
Sbjct: 662 -----------------TGKGEKCFSERDFSPLQTQTFNR-ETTIKCY 691


>gi|13027602 DDRGK domain containing 1 [Homo sapiens]
          Length = 314

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 13/81 (16%)

Query: 357 EPSDTHLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRK 416
           +P++THL        +G++    +RKLEEK  +  AQR         +R + +R  S+R+
Sbjct: 107 KPAETHL--------SGKIGAKKLRKLEEKQAR-KAQREAEEA----EREERKRLESQRE 153

Query: 417 LPWVKVKNLKRMEGKVKDYEK 437
             W K +   R+E + K+ E+
Sbjct: 154 AEWKKEEERLRLEEEQKEEEE 174


>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
          Length = 1235

 Score = 32.3 bits (72), Expect = 0.91
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 13/129 (10%)

Query: 27  VMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQ 86
           ++ E  +K+ +    +   ++   +++++   I +L+TA+KS++    ++  +L+ E++Q
Sbjct: 357 LLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQ 416

Query: 87  FSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDLGSDSPIQTDHMMERL 146
               V ++ +           LQL+  E  +   E+   I  K    ++ I  D + E L
Sbjct: 417 NEKLVQENRE-----------LQLQYLEQKQQLDELKKRI--KLYNQENDINADELSEAL 463

Query: 147 LLKIHQRLQ 155
           LL   Q+ Q
Sbjct: 464 LLIKAQKEQ 472


>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
          Length = 1315

 Score = 32.3 bits (72), Expect = 0.91
 Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 13/129 (10%)

Query: 27  VMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQ 86
           ++ E  +K+ +    +   ++   +++++   I +L+TA+KS++    ++  +L+ E++Q
Sbjct: 357 LLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQ 416

Query: 87  FSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDLGSDSPIQTDHMMERL 146
               V ++ +           LQL+  E  +   E+   I  K    ++ I  D + E L
Sbjct: 417 NEKLVQENRE-----------LQLQYLEQKQQLDELKKRI--KLYNQENDINADELSEAL 463

Query: 147 LLKIHQRLQ 155
           LL   Q+ Q
Sbjct: 464 LLIKAQKEQ 472


>gi|31377611 coiled-coil domain containing 148 [Homo sapiens]
          Length = 591

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 370 EETGELTVAL-VRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPW--VKVKNLK 426
           EE   L + +  R+ E++  K    + K  +    ++ K ++YW+++K  W  +++++L+
Sbjct: 379 EEVARLEMEISARRREKEEEKEKLWKKKELLQRAEKKKKIKKYWAKKKQKWQEMEMRDLQ 438

Query: 427 RME 429
           R+E
Sbjct: 439 RLE 441


>gi|229577185 epidermal growth factor receptor pathway substrate 15
           isoform B [Homo sapiens]
          Length = 582

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 10  LYQRLKSA-KKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRL---IDELQTA 65
           L ++LK   KK  ++  L+ + + E  +++  +S   +E  K +EE+SRL     EL+ +
Sbjct: 94  LEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETAELEES 153

Query: 66  IKSNIGHLCKLGPQLQAEQEQFSS 89
           ++S    L  L   LQ  Q++ SS
Sbjct: 154 VESGKAQLEPLQQHLQDSQQEISS 177


>gi|4503593 epidermal growth factor receptor pathway substrate 15
           isoform A [Homo sapiens]
          Length = 896

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 10  LYQRLKSA-KKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRL---IDELQTA 65
           L ++LK   KK  ++  L+ + + E  +++  +S   +E  K +EE+SRL     EL+ +
Sbjct: 408 LEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETAELEES 467

Query: 66  IKSNIGHLCKLGPQLQAEQEQFSS 89
           ++S    L  L   LQ  Q++ SS
Sbjct: 468 VESGKAQLEPLQQHLQDSQQEISS 491


>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 828

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/57 (22%), Positives = 28/57 (49%)

Query: 381 RKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEK 437
           +KL E+  +   Q  K +    + R +  + W + +  W + K ++  E K++D E+
Sbjct: 303 KKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEE 359


>gi|217330589 transforming growth factor, beta receptor associated
           protein 1 [Homo sapiens]
          Length = 860

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 275 TRHSGDDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 323
           T+   D+ QK  F  D  I   K YP+ ++ YLE L     + + EYH H
Sbjct: 562 TKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611


>gi|21359865 transforming growth factor, beta receptor associated
           protein 1 [Homo sapiens]
          Length = 860

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 275 TRHSGDDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 323
           T+   D+ QK  F  D  I   K YP+ ++ YLE L     + + EYH H
Sbjct: 562 TKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611


>gi|22726201 inositol polyphosphate multikinase [Homo sapiens]
          Length = 416

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 10/29 (34%), Positives = 20/29 (68%)

Query: 320 YHIHHGAWTTAHQEHGRNLAEEVLQESAS 348
           YH+H  ++ T +Q +GR+L +E +++  S
Sbjct: 184 YHVHSDSYETENQHYGRSLTKETIKDGVS 212


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 13  RLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG 71
           +L S +    Q++ ++ E+KE++ ++V+   T K     Q +V R ++E +  ++SNIG
Sbjct: 762 KLMSERIKSNQIHKLLKEEKEELADQVL---TLKTQVDAQLQVVRKLEEKEHLLQSNIG 817


>gi|91754185 hypothetical protein LOC254268 [Homo sapiens]
          Length = 836

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 9/66 (13%)

Query: 30  EQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQFSS 89
           EQK KITE             + E +  +  EL T I+S    L KL P  Q      SS
Sbjct: 318 EQKGKITEP--------SQQIQMEPIVHIHQELLTGIESEAS-LSKLSPTSQKGTSSSSS 368

Query: 90  YVYQHI 95
           Y++Q I
Sbjct: 369 YIFQKI 374


>gi|4506467 radixin [Homo sapiens]
          Length = 583

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 22/82 (26%), Positives = 36/82 (43%)

Query: 10  LYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSN 69
           L +RLK  ++   +    + EQ  K  E       AKE  +  E+  R  +E ++AI   
Sbjct: 347 LMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQ 406

Query: 70  IGHLCKLGPQLQAEQEQFSSYV 91
                K   QL AE  +F++ +
Sbjct: 407 AADQMKNQEQLAAELAEFTAKI 428


>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
           [Homo sapiens]
          Length = 1046

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 15/161 (9%)

Query: 7   LLALYQRLKSAKKYYKQLNLVMNEQKEKITE--KVILSMTAKEHHKEQEEVSRLIDELQT 64
           +L L +RL SA K +++ + V+ ++ EK  +  +  +      + K  +EV+ L D++Q 
Sbjct: 542 ILRLRERLLSASKEHQRESGVLRDKYEKALKAYQAEVDKLRAANEKYAQEVAGLKDKVQQ 601

Query: 65  AIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLK-------VFENGK 117
           A   N+G    L    +++ +  +S   + ++ L A      G Q K       V E  K
Sbjct: 602 ATSENMG----LMDNWKSKLDSLASDHQKSLEDLKATLNSGPGAQQKEIGELKAVMEGIK 657

Query: 118 NTGEISVG--ISKKDLGSDSPIQTDHMMERLLLKIHQRLQG 156
              ++ +G   +K DL +   ++    +   L +  + L G
Sbjct: 658 MEHQLELGNLQAKHDLETAMHVKEKEALREKLQEAQEELAG 698


>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
          Length = 983

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 11  YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 70
           Y++L+S+ +   +++++ ++ KE + EK  +     +   E  +V R  + +QT +KS  
Sbjct: 792 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 849

Query: 71  GHLCKLGPQLQAEQEQFS 88
             + +L  + Q  QE+ +
Sbjct: 850 QEVNELLQKFQQAQEELA 867


>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
          Length = 972

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 11  YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 70
           Y++L+S+ +   +++++ ++ KE + EK  +     +   E  +V R  + +QT +KS  
Sbjct: 781 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 838

Query: 71  GHLCKLGPQLQAEQEQFS 88
             + +L  + Q  QE+ +
Sbjct: 839 QEVNELLQKFQQAQEELA 856


>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
          Length = 951

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 11  YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 70
           Y++L+S+ +   +++++ ++ KE + EK  +     +   E  +V R  + +QT +KS  
Sbjct: 760 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 817

Query: 71  GHLCKLGPQLQAEQEQFS 88
             + +L  + Q  QE+ +
Sbjct: 818 QEVNELLQKFQQAQEELA 835


>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 11  YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 70
           Y++L+S+ +   +++++ ++ KE + EK  +     +   E  +V R  + +QT +KS  
Sbjct: 789 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 846

Query: 71  GHLCKLGPQLQAEQEQFS 88
             + +L  + Q  QE+ +
Sbjct: 847 QEVNELLQKFQQAQEELA 864


>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 11  YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 70
           Y++L+S+ +   +++++ ++ KE + EK  +     +   E  +V R  + +QT +KS  
Sbjct: 789 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 846

Query: 71  GHLCKLGPQLQAEQEQFS 88
             + +L  + Q  QE+ +
Sbjct: 847 QEVNELLQKFQQAQEELA 864


>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 11  YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 70
           Y++L+S+ +   +++++ ++ KE + EK  +     +   E  +V R  + +QT +KS  
Sbjct: 789 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 846

Query: 71  GHLCKLGPQLQAEQEQFS 88
             + +L  + Q  QE+ +
Sbjct: 847 QEVNELLQKFQQAQEELA 864


>gi|209862743 tetratricopeptide repeat domain 39C isoform 1 [Homo
           sapiens]
          Length = 583

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 2   YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 60
           YI+G  + L +  K   K Y  +N +    ++K+TE+ + S  A ++H   E VS   ++
Sbjct: 155 YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 213

Query: 61  ELQTAIKSNIG--HLC 74
            L+ A+    G  HLC
Sbjct: 214 RLKGAVSFGYGLFHLC 229


>gi|116256462 tetratricopeptide repeat domain 39C isoform 2 [Homo
           sapiens]
          Length = 522

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 2   YIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVS-RLID 60
           YI+G  + L +  K   K Y  +N +    ++K+TE+ + S  A ++H   E VS   ++
Sbjct: 94  YIKGGWI-LRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLN 152

Query: 61  ELQTAIKSNIG--HLC 74
            L+ A+    G  HLC
Sbjct: 153 RLKGAVSFGYGLFHLC 168


>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
           [Homo sapiens]
          Length = 1011

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 15/161 (9%)

Query: 7   LLALYQRLKSAKKYYKQLNLVMNEQKEKITE--KVILSMTAKEHHKEQEEVSRLIDELQT 64
           +L L +RL SA K +++ + V+ ++ EK  +  +  +      + K  +EV+ L D++Q 
Sbjct: 507 ILRLRERLLSASKEHQRESGVLRDKYEKALKAYQAEVDKLRAANEKYAQEVAGLKDKVQQ 566

Query: 65  AIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLK-------VFENGK 117
           A   N+G    L    +++ +  +S   + ++ L A      G Q K       V E  K
Sbjct: 567 ATSENMG----LMDNWKSKLDSLASDHQKSLEDLKATLNSGPGAQQKEIGELKAVMEGIK 622

Query: 118 NTGEISVG--ISKKDLGSDSPIQTDHMMERLLLKIHQRLQG 156
              ++ +G   +K DL +   ++    +   L +  + L G
Sbjct: 623 MEHQLELGNLQAKHDLETAMHVKEKEALREKLQEAQEELAG 663


>gi|42794754 acyl-CoA synthetase long-chain family member 3 [Homo
           sapiens]
          Length = 720

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 292 CIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTT-AHQEHGRNLAEEVLQESASNL 350
           C Y+ +Y  +V+ ++     ++     +  +  G W    +     N   +VL E+A + 
Sbjct: 611 CAYANSYHSYVIGFVVPNQKELTELARKKGLK-GTWEELCNSCEMENEVLKVLSEAAISA 669

Query: 351 GLKQLPEPSDTHLMPEGSLEETGELTVA--LVRKLEEKHPKASAQR 394
            L++   P    L PE    ETG +T A  L RK  + H +A  +R
Sbjct: 670 SLEKFEIPVKIRLSPEPWTPETGLVTDAFKLKRKELKTHYQADIER 715


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,614,367
Number of Sequences: 37866
Number of extensions: 810165
Number of successful extensions: 2874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2838
Number of HSP's gapped (non-prelim): 72
length of query: 456
length of database: 18,247,518
effective HSP length: 106
effective length of query: 350
effective length of database: 14,233,722
effective search space: 4981802700
effective search space used: 4981802700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.