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Search of human proteins with 239743754
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform
1 [Homo sapiens]
(1288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 2639 0.0
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 2597 0.0
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 1903 0.0
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 1845 0.0
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 1722 0.0
gi|18640734 contactin associated protein-like 5 [Homo sapiens] 1399 0.0
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 1209 0.0
gi|239743797 PREDICTED: similar to cell recognition molecule CAS... 1201 0.0
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 884 0.0
gi|239743729 PREDICTED: similar to contactin associated protein-... 723 0.0
gi|169184330 PREDICTED: novel protein similar to contactin assoc... 550 e-156
gi|239758135 PREDICTED: similar to cell recognition molecule CAS... 265 2e-70
gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens] 216 1e-55
gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens] 214 4e-55
gi|239752499 PREDICTED: similar to cell recognition molecule Cas... 146 1e-34
gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens] 135 2e-31
gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens] 135 3e-31
gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens] 117 9e-26
gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Ho... 90 1e-17
gi|105990535 coagulation factor V precursor [Homo sapiens] 86 2e-16
gi|62420886 discoidin domain receptor family, member 2 precursor... 84 7e-16
gi|62420884 discoidin domain receptor family, member 2 precursor... 84 7e-16
gi|38327632 discoidin domain receptor family, member 1 isoform b... 79 3e-14
gi|83977452 discoidin domain receptor family, member 1 isoform c... 79 3e-14
gi|83977450 discoidin domain receptor family, member 1 isoform a... 79 3e-14
gi|33469931 EGF-like, fibronectin type III and laminin G domains... 79 4e-14
gi|33469929 EGF-like, fibronectin type III and laminin G domains... 79 4e-14
gi|33469935 EGF-like, fibronectin type III and laminin G domains... 78 5e-14
gi|54873613 agrin [Homo sapiens] 78 6e-14
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 78 6e-14
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 2639 bits (6841), Expect = 0.0
Identities = 1288/1288 (100%), Positives = 1288/1288 (100%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV
Sbjct: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
Query: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA
Sbjct: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
Query: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL
Sbjct: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
Query: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN
Sbjct: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
Query: 601 PSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 660
PSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA
Sbjct: 601 PSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 660
Query: 661 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ
Sbjct: 661 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
Query: 721 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 780
KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL
Sbjct: 721 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 780
Query: 781 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI
Sbjct: 781 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
Query: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ
Sbjct: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
Query: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG
Sbjct: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
Query: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL
Sbjct: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
Query: 1021 SENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
SENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRY
Sbjct: 1021 SENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
Query: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKS 1140
KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKS
Sbjct: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKS 1140
Query: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM
Sbjct: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
Query: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLC 1260
ARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLC
Sbjct: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLC 1260
Query: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 2597 bits (6731), Expect = 0.0
Identities = 1265/1288 (98%), Positives = 1277/1288 (99%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCD+PLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLY LDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK
Sbjct: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
SS LDLNFEISFGGI +PGRSRAF RKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV
Sbjct: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL+RGSGSFV
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
Query: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
LFLKDGKLKLSLFQ GQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA
Sbjct: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
Query: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
VLIDSGDTYYFGGCL NSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL
Sbjct: 481 VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
Query: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN
Sbjct: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
Query: 601 PSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 660
PSGLYYIDADGSGPLGPFLVYCNMTAD+AWTVV+HGGPDAVTLRGAPSGHP SAVSFAYA
Sbjct: 601 PSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA 660
Query: 661 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
AGAGQLR+AVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ
Sbjct: 661 AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
Query: 721 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 780
KCTCGLEGNCIDSQYYCNCDAG+NEWTSDTIVLSQKEHLPVTQIVMTD G+PHSEA YTL
Sbjct: 721 KCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTL 780
Query: 781 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
GPLLCRGD+SFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI
Sbjct: 781 GPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
Query: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ
Sbjct: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
Query: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG
Sbjct: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
Query: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL
Sbjct: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
Query: 1021 SENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
SENSSSLVSSL+RDVTLTREMITLSFRTTR+PSLLLYVSSFYEEYLSVILANNGSLQIRY
Sbjct: 1021 SENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
Query: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKS 1140
KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQS KKQVILSSGTEFNAVKS
Sbjct: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKS 1140
Query: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM
Sbjct: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
Query: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLC 1260
ARCAAGAASGSPARELAPRLAGGAGRSGP DEGEPLVNADRRDSAV+GGVIAVVIFILLC
Sbjct: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLC 1260
Query: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 1903 bits (4930), Expect = 0.0
Identities = 917/918 (99%), Positives = 917/918 (99%), Gaps = 1/918 (0%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV
Sbjct: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
Query: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA
Sbjct: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
Query: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL
Sbjct: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
Query: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN
Sbjct: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
Query: 601 PSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 660
PSGLYYIDADGSGPLGPFLVYCNMT DSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA
Sbjct: 601 PSGLYYIDADGSGPLGPFLVYCNMT-DSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 659
Query: 661 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ
Sbjct: 660 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 719
Query: 721 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 780
KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL
Sbjct: 720 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 779
Query: 781 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI
Sbjct: 780 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 839
Query: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ
Sbjct: 840 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 899
Query: 901 PAPADGHVRLQLNSQLFI 918
PAPADGHVRLQLNSQLFI
Sbjct: 900 PAPADGHVRLQLNSQLFI 917
Score = 561 bits (1446), Expect = e-159
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 999 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV 1058
EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV
Sbjct: 918 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV 977
Query: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1118
SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE
Sbjct: 978 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1037
Query: 1119 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1178
VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP
Sbjct: 1038 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1097
Query: 1179 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 1238
LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN
Sbjct: 1098 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 1157
Query: 1239 ADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 1158 ADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 1207
Score = 48.5 bits (114), Expect = 4e-05
Identities = 59/261 (22%), Positives = 96/261 (36%), Gaps = 24/261 (9%)
Query: 757 EHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTAD 816
E+L + +T+ + H +G + + +F + SYL P GE
Sbjct: 334 ENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVS 393
Query: 817 VCFFFKTTVSSG--VFME-NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 873
V F F+T +G +F E G F+ +++ F G P VT + ND
Sbjct: 394 VTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSL-FQAGQSPRNVTAGAG--LND 450
Query: 874 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRG------ 927
QWH V ++ VD +QP A V + + GG G
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDD-DTAVQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSP 506
Query: 928 ---FLGCIRSLQLNGVALD--LEERATVTPGVE---PGCAGHCSTYGHLCRNGGRCREKR 979
F GC+R + + A+D L ++ + + C C +GG C +
Sbjct: 507 LGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW 566
Query: 980 RGVTCDCAFSAYDGPFCSNEI 1000
+CDC + Y G C + +
Sbjct: 567 DTFSCDCLGTGYTGETCHSSL 587
Score = 33.5 bits (75), Expect = 1.3
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 821 FKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTP-----FNDN 874
FK S+G+ + G + I +EL ++ F + GN T+ T +D
Sbjct: 212 FKAMQSNGILLHREGQHGNHITLEL-IKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 875 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT-------ATRQRG 927
WH V E + VD+ Q A D L LN ++ GG A ++
Sbjct: 271 HWHSVLIELLDTQVNFTVDKHTHHFQ-AKGDSS-NLDLNFEISFGGILSPGRSRAFTRKS 328
Query: 928 FLGCIRSLQLNGV 940
F GC+ +L NGV
Sbjct: 329 FHGCLENLYYNGV 341
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sapiens]
Length = 1308
Score = 1845 bits (4779), Expect = 0.0
Identities = 898/1286 (69%), Positives = 1048/1286 (81%), Gaps = 8/1286 (0%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
M SV AVLK LLLL TQ W+ V AGN DCD PL SALP++SFSSSSELSSSHGPGF+R
Sbjct: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGW+PLVSNKYQWLQIDLGERMEVTAVATQGGYGSS+WVTSYLLMFSD G NW
Sbjct: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYR+E+SIWGF GN NADSVV+YRLQP +ARFLRF+PL WNP+GRIGMRIEV+GCAY+
Sbjct: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
Query: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVV DG+S+LLY D+K L PI+D+ISLKFK MQS+GILLHREG +G+HITL+L + +
Sbjct: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
L +NSG AKLPST V LTLGSLLDDQHWHSVLI+ L QVNFTVD+H HHF A+G+
Sbjct: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
Query: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
+ ++L++EISFGGI +PG+S +F ++FHGCLENLYYNGVD+ +LAK+ KPQI+ MGNV
Sbjct: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
SFSC QPQ++PVTFLSSRSYLALP SGE++VS TFQFRTWN+AG LLF ELQ SG +
Sbjct: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
Query: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA-VQPLV 479
LFL DGKLK +L+Q G+ P ++TAG LNDGQWHSVS SAK +H++V VD A PL+
Sbjct: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
Query: 480 AV-LIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
I SG TYYFGGC S GS CKSPLGGFQGC+RLI+I K VD I VQQG+LG+F
Sbjct: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
Query: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHR 598
DLQIDSCGI+DRCLP+YCEHGGECSQSW TF C+C TGY G TCH+S+YEQSCEA+KHR
Sbjct: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
Query: 599 GNPSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFA 658
GN SG YYID+DGSGPL PFL+YCNMT ++AWT+++H G D +R +P + F
Sbjct: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMT-ETAWTIIQHNGSDLTRVRNTNPENPYAGF-FE 658
Query: 659 YAAGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPD 718
Y A QL+A +N AE CEQ C +R + +DGTPLSWWVGRTNET T WGGS PD
Sbjct: 659 YVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPD 718
Query: 719 AQKCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADY 778
QKCTCGLEGNCIDSQYYCNCDA +NEWT+DT +L+ KEHLPVT+IV+TDTG+ HSEA Y
Sbjct: 719 LQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAY 778
Query: 779 TLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITD 838
LGPLLC+GD+SFWNSASF+TE SYLHFP FHGEL+ADV FFFKTT SSGVF+ENLGI D
Sbjct: 779 KLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIAD 838
Query: 839 FIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQK 898
FIRIELR+PT VTFSFDVGNGP E++VQSPT FNDNQWHHVR ERN+K ASLQVDQL K
Sbjct: 839 FIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPK 898
Query: 899 MQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
QPAPADGHV LQLNSQLF+GGTATRQRGFLGCIRSLQLNG+ LDLEERA VTP V+PGC
Sbjct: 899 TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGC 958
Query: 959 AGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHY 1018
GHCS+YG LCRNGG+CRE+ G CDC FSAY GPFCSNEISAYF +GSS+ Y+FQE+Y
Sbjct: 959 RGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENY 1018
Query: 1019 TLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQI 1078
LS+NSSS +S + D+ L+REMI SFRTTR+PSLLL+VSSFY+EYLSVI+A NGSLQI
Sbjct: 1019 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI 1078
Query: 1079 RYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAV 1138
RYKL+++Q PD FDFKNMADGQLH + INREE VV +E++ + ++QV LSSGTEF+AV
Sbjct: 1079 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAV 1138
Query: 1139 KSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVA 1198
KSL+LG++LE + D DT A GFTGCLSAV+ APLKAAL PS P VTV GHV
Sbjct: 1139 KSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVT 1198
Query: 1199 PMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFIL 1258
+ C A + + +RE R A SG +D+ EPL NA + DSAV+GG+IAVVIFIL
Sbjct: 1199 E-SSCMAQPGTDATSRE---RTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFIL 1254
Query: 1259 LCITAIAIRIYQQRKLRKENESKVSK 1284
LCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1255 LCITAIAVRIYQQKRLYKRSEAKRSE 1280
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sapiens]
Length = 1235
Score = 1722 bits (4461), Expect = 0.0
Identities = 848/1257 (67%), Positives = 988/1257 (78%), Gaps = 56/1257 (4%)
Query: 30 DCDSPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERM 89
DCD PL SALP++SFSSSSELSSSHGPGF+RLNRRDGAGGW+PLVSNKYQWLQIDLGERM
Sbjct: 5 DCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGERM 64
Query: 90 EVTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPP 149
EVTAVATQGGYGSS+WVTSYLLMFSD G NWKQYR+E+SIWGF GN NADSVV+YRLQP
Sbjct: 65 EVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPS 124
Query: 150 FEARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYTLDKKPLKPIRDVIS 209
+ARFLRF+PL WNP+GRIGMRIEV+GCAY+SEVV DG+S+LLY D+K L PI+D+IS
Sbjct: 125 IKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIIS 184
Query: 210 LKFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDD 269
LKFK MQS+GILLHREG +G+HITL+L + +L +NSG AKLPST V LTLGSLLDD
Sbjct: 185 LKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDD 244
Query: 270 QHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSF 329
QHWHSVLI+ L QVNFTVD+H HHF A+G+ + ++L++E
Sbjct: 245 QHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYE-------------------- 284
Query: 330 HGCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGE 389
GNVSFSC QPQ++PVTFLSSRSYLALP SGE
Sbjct: 285 ----------------------------GNVSFSCSQPQSMPVTFLSSRSYLALPDFSGE 316
Query: 390 DKVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLN 449
++VS TFQFRTWN+AG LLF ELQ SG +LFL DGKLK +L+Q G+ P ++TAG LN
Sbjct: 317 EEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELN 376
Query: 450 DGQWHSVSFSAKWSHMNVVVDDDTA-VQPLVAV-LIDSGDTYYFGGCLGNSSGSGCKSPL 507
DGQWHSVS SAK +H++V VD A PL+ I SG TYYFGGC S GS CKSPL
Sbjct: 377 DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPL 436
Query: 508 GGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWD 567
GGFQGC+RLI+I K VD I VQQG+LG+F DLQIDSCGI+DRCLP+YCEHGGECSQSW
Sbjct: 437 GGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWS 496
Query: 568 TFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTAD 627
TF C+C TGY G TCH+S+YEQSCEA+KHRGN SG YYID+DGSGPL PFL+YCNMT +
Sbjct: 497 TFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMT-E 555
Query: 628 SAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYAAGAGQLRAAVNLAERCEQRLALRCGTA 687
+AWT+++H G D +R +P + F Y A QL+A +N AE CEQ C +
Sbjct: 556 TAWTIIQHNGSDLTRVRNTNPENPYAGF-FEYVASMEQLQATINRAEHCEQEFTYYCKKS 614
Query: 688 RRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQNEWT 747
R + +DGTPLSWWVGRTNET T WGGS PD QKCTCGLEGNCIDSQYYCNCDA +NEWT
Sbjct: 615 RLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWT 674
Query: 748 SDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFP 807
+DT +L+ KEHLPVT+IV+TDTG+ HSEA Y LGPLLC+GD+SFWNSASF+TE SYLHFP
Sbjct: 675 NDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFP 734
Query: 808 AFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQS 867
FHGEL+ADV FFFKTT SSGVF+ENLGI DFIRIELR+PT VTFSFDVGNGP E++VQS
Sbjct: 735 TFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQS 794
Query: 868 PTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRG 927
PT FNDNQWHHVR ERN+K ASLQVDQL K QPAPADGHV LQLNSQLF+GGTATRQRG
Sbjct: 795 PTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRG 854
Query: 928 FLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCA 987
FLGCIRSLQLNG+ LDLEERA VTP V+PGC GHCS+YG LCRNGG+CRE+ G CDC
Sbjct: 855 FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCT 914
Query: 988 FSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFR 1047
FSAY GPFCSNEISAYF +GSS+ Y+FQE+Y LS+NSSS +S + D+ L+REMI SFR
Sbjct: 915 FSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFR 974
Query: 1048 TTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVK 1107
TTR+PSLLL+VSSFY+EYLSVI+A NGSLQIRYKL+++Q PD FDFKNMADGQLH +
Sbjct: 975 TTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIM 1034
Query: 1108 INREEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGC 1167
INREE VV +E++ + ++QV LSSGTEF+AVKSL+LG++LE + D DT A GFTGC
Sbjct: 1035 INREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGC 1094
Query: 1168 LSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRS 1227
LSAV+ APLKAAL PS P VTV GHV + C A + + +RE R A S
Sbjct: 1095 LSAVQLSHVAPLKAALHPSHPDPVTVTGHVTE-SSCMAQPGTDATSRE---RTHSFADHS 1150
Query: 1228 GPVDEGEPLVNADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSK 1284
G +D+ EPL NA + DSAV+GG+IAVVIFILLCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1151 GTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSE 1207
>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
Length = 1306
Score = 1399 bits (3620), Expect = 0.0
Identities = 686/1279 (53%), Positives = 898/1279 (70%), Gaps = 13/1279 (1%)
Query: 11 VLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGW 70
VL LL + W +CD PLAS L +FSSSS+L+ +H P ++LN R G GGW
Sbjct: 10 VLTLLFSGLWHLGLTATNYNCDDPLASLLSPMAFSSSSDLTGTHSP--AQLNWRVGTGGW 67
Query: 71 TPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIW 130
+P SN QWLQ+DLG R+E+TAVATQG YGSSDWVTSY LMFSD GRNWKQY++E+SIW
Sbjct: 68 SPADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQEDSIW 127
Query: 131 GFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQS 190
F GN NADSVVH++L ARF+RF+PL WNP G+IGMR+EVYGC+YKS+V FDG+S
Sbjct: 128 TFAGNMNADSVVHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADFDGRS 187
Query: 191 ALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNA 250
+LLY ++K + ++DVISLKFK+MQ +G+L H EGQ G+HITLEL KG+L LN G++
Sbjct: 188 SLLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLNLGDS 247
Query: 251 KLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEI 310
K + + + TLGSLLDDQHWHSVLIE + QVNFTVDKHT HF+ KG++ LD+++E+
Sbjct: 248 KARLSSSLPSATLGSLLDDQHWHSVLIERVGKQVNFTVDKHTQHFRTKGETDALDIDYEL 307
Query: 311 SFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTV 370
SFGGI PG+ F +K+FHGC+ENLYYNGV++ +LAK+ K QI GNV+FSC +PQ V
Sbjct: 308 SFGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYT-GNVTFSCSEPQIV 366
Query: 371 PVTFL-SSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLK 429
P+TF+ SS SYL LPG D +SV+FQFRTWN+ G LL EL GSG+ +L L+ G L+
Sbjct: 367 PITFVNSSGSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILR 426
Query: 430 LSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA--VQPLVAVLIDSGD 487
L + + + + G+ LNDG WHSVS +A+ + + + +DD+ A V I SG+
Sbjct: 427 LVIQKMTERVAEILTGSNLNDGLWHSVSINARRNRITLTLDDEAAPPAPDSTWVQIYSGN 486
Query: 488 TYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGI 547
+YYFGGC N + S C +P+ FQGC+RLI I ++ D I VQQG+LG+F DL ID C I
Sbjct: 487 SYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSI 546
Query: 548 TDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYI 607
DRCLP+YCEHGG CSQSW TF C+C T YTG TCH+S+YEQSCE ++H+GN +G +YI
Sbjct: 547 KDRCLPNYCEHGGSCSQSWTTFYCNCSDTSYTGATCHNSIYEQSCEVYRHQGNTAGFFYI 606
Query: 608 DADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYAAGAGQLR 667
D+DGSGPLGP VYCN+T D WT V+H + +RGA P A++ Y QL
Sbjct: 607 DSDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTRVRGANPEKPY-AMALDYGGSMEQLE 665
Query: 668 AAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLE 727
A ++ +E CEQ +A C +R ++ DGTP +WW+GR+NE H WGGS P Q+C CGL+
Sbjct: 666 AVIDGSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNERHPYWGGSPPGVQQCECGLD 725
Query: 728 GNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRG 787
+C+D Q++CNCDA ++EWT+DT LS K+HLPVTQIV+TDT + +SEA + +GPL C G
Sbjct: 726 ESCLDIQHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTDRSNSEAAWRIGPLRCYG 785
Query: 788 DKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAP 847
D+ FWN+ SF TE SYLHFP FH E +AD+ FFFKTT SGVF+ENLGI DFIR+E+ +P
Sbjct: 786 DRRFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFIRLEISSP 845
Query: 848 TEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGH 907
+E+TF+ DVGNGP E+ VQSP+ NDNQWH+VRAERN+K SLQVD LP+ + +GH
Sbjct: 846 SEITFAIDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEEGH 905
Query: 908 VRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGH 967
RLQLNSQLF+GGT++RQ+GFLGCIRSL LNG +DLEERA VT GV PGC GHCS+YG
Sbjct: 906 FRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCPGHCSSYGS 965
Query: 968 LCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSL 1027
+C NGG+C EK G CDC S Y+GPFC E+SA F G+S+TY FQE Y +++N S
Sbjct: 966 ICHNGGKCVEKHNGYLCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPVTKNISLS 1025
Query: 1028 VSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQN 1087
S++Y D ++E I LSF TT++PSLLL+++S ++++ V+L NGSLQ+RY L++ +
Sbjct: 1026 SSAIYTDSAPSKENIALSFVTTQAPSLLLFINSSSQDFVVVLLCKNGSLQVRYHLNKEET 1085
Query: 1088 PDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVL 1147
FT D N A+ ++H +KINRE + ++++Q + S EF ++SL LGKV
Sbjct: 1086 -HVFTIDADNFANRRMHHLKINREGRELTIQMDQQLRLSYNFSPEVEFRVIRSLTLGKVT 1144
Query: 1148 EAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGA 1207
E G D + +A GF GC+S+V++ APLKAALR + + VTV G + + G
Sbjct: 1145 ENLGLDSEVAKANAMGFAGCMSSVQYNHIAPLKAALRHATVAPVTVHG---TLTESSCGF 1201
Query: 1208 ASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLCITAIAIR 1267
S + + + G DE EPL NA R DSAV+GGVIAVVIFI+ CI I R
Sbjct: 1202 MVDSDVNAVT-TVHSSSDPFGKTDEREPLTNAVRSDSAVIGGVIAVVIFIIFCIIGIMTR 1260
Query: 1268 IYQQRKLRKENESKVSKKE 1286
Q K + S++ +KE
Sbjct: 1261 FLYQHK-QSHRTSQMKEKE 1278
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapiens]
Length = 1331
Score = 1209 bits (3128), Expect = 0.0
Identities = 603/1275 (47%), Positives = 834/1275 (65%), Gaps = 22/1275 (1%)
Query: 31 CDSPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
CD PL S LP +FSSSS +S S+ PG++++N+R GAGGW+P S+ YQWLQ+D G R +
Sbjct: 35 CDEPLVSGLPHVAFSSSSSISGSYSPGYAKINKRGGAGGWSPSDSDHYQWLQVDFGNRKQ 94
Query: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
++A+ATQG Y SSDWVT Y +++SD GRNWK Y ++ +IW FPGN N+D VV + LQ P
Sbjct: 95 ISAIATQGRYSSSDWVTQYRMLYSDTGRNWKPYHQDGNIWAFPGNINSDGVVRHELQHPI 154
Query: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISL 210
AR++R +PL WN GRIG+RIEVYGC+Y ++V+ FDG L Y K +K ++DVI+L
Sbjct: 155 IARYVRIVPLDWNGEGRIGLRIEVYGCSYWADVINFDGHVVLPYRFRNKKMKTLKDVIAL 214
Query: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
FK +S G++LH EGQ G++ITLEL K KLV LN G+ +L ++ GSLLDD
Sbjct: 215 NFKTSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMTGSLLDDH 274
Query: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFH 330
HWHSV+IE +N T+D+ HF+ G+ LDL++EI+FGGI G+ + +RK+F
Sbjct: 275 HWHSVVIERQGRSINLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSSSRKNFK 334
Query: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
GC+E++ YNGV++T+LA++ K + +GN+SFSC +P TVPV F ++ SYL +PG +D
Sbjct: 335 GCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPV-FFNATSYLEVPGRLNQD 393
Query: 391 KVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGK--LKLSLFQAGQSPRNVTAGAGL 448
SV+FQFRTWN G L+F G+ + L + K + +++ Q S ++++G+GL
Sbjct: 394 LFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISSGSGL 453
Query: 449 NDGQWHSVSFSAKWSHMNVVVDDD--TAVQPLVAVLIDSGDTYYFGGCLGNSSGSGCKSP 506
NDGQWH V F AK + + +D D +AV+ + + +G+ Y+FGG L + S
Sbjct: 454 NDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTGEKYFFGGFLNQMNNSSHSVL 513
Query: 507 LGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW 566
FQGC++LI + D+ V+ V Q GSF ++ ID C I DRC+P++CEHGG+CSQ+W
Sbjct: 514 QPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTW 573
Query: 567 DTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTA 626
D+F C C TGY+G TCH+S+YE SCEA+KH G S Y+ID DGSGPLGP VYCNMT
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAYKHLGQTSNYYWIDPDGSGPLGPLKVYCNMTE 633
Query: 627 DSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYAAGAGQLRAAVNLAERCEQRLALRCGT 686
D WT+V H + G + S Y+A Q+ A + AE CEQ ++ C
Sbjct: 634 DKVWTIVSHDLQMQTPVVGY-NPEKYSVTQLVYSASMDQISAITDSAEYCEQYVSYFCKM 692
Query: 687 ARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQNEW 746
+R ++ DG+P +WWVG+ NE H WGGS P QKC CG+E NC D +YYCNCDA +W
Sbjct: 693 SRLLNTPDGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDADYKQW 752
Query: 747 TSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHF 806
D LS K+HLPV+Q+V+ DT + SEA ++GPL C+GD+++WN+ASF +SYLHF
Sbjct: 753 RKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQGDRNYWNAASFPNPSSYLHF 812
Query: 807 PAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQ 866
F GE +AD+ F+FKT GVF+EN+G DFI++EL++ TEV+FSFDVGNGP E+ V+
Sbjct: 813 STFQGETSADISFYFKTLTPWGVFLENMGKEDFIKLELKSATEVSFSFDVGNGPVEIVVR 872
Query: 867 SPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQR 926
SPTP ND+QWH V AERNVK ASLQVD+LPQ+++ AP +GH RL+L SQLF+GG A Q+
Sbjct: 873 SPTPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGG-AGGQQ 931
Query: 927 GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDC 986
GFLGCIRSL++NGV LDLEERA VT G GC+GHC++YG C NGG+C E+ G +CDC
Sbjct: 932 GFLGCIRSLRMNGVTLDLEERAKVTSGFISGCSGHCTSYGTNCENGGKCLERYHGYSCDC 991
Query: 987 AFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSL----YRDVTLTREMI 1042
+ +AYDG FC+ ++ A+F G + Y+FQ T + +SSS V + L +E I
Sbjct: 992 SNTAYDGTFCNKDVGAFFEEGMWLRYNFQAPATNARDSSSRVDNAPDQQNSHPDLAQEEI 1051
Query: 1043 TLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQ 1102
SF TT++P +LLY+SSF ++L+V++ GSLQIRY L + P D +NMA+GQ
Sbjct: 1052 RFSFSTTKAPCILLYISSFTTDFLAVLVKPTGSLQIRYNLGGTREPYNIDVDHRNMANGQ 1111
Query: 1103 LHQVKINREEAVVMVEVNQ--SAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAA 1160
H V I R E + ++++ S + SS T FN+ KSL LGKV+E D + +
Sbjct: 1112 PHSVNITRHEKTIFLKLDHYPSVSYHLPSSSDTLFNSPKSLFLGKVIETGKIDQEIHKYN 1171
Query: 1161 TSGFTGCLSAVRFGRAAPLKAALRPSGPS-RVTVRGHVAPMARCAAGAASGSPARELAPR 1219
T GFTGCLS V+F + APLKAALR + S V ++G + + C A + SP
Sbjct: 1172 TPGFTGCLSRVQFNQIAPLKAALRQTNASAHVHIQGELVE-SNCGASPLTLSPMSSATDP 1230
Query: 1220 LAGGAGRSGPVD------EGEPLVNADRRDSAVMGGVIAVVIFILLCITAIAIR-IYQQR 1272
S D +G+ + N R+SA++GGVIAVVIF +LC IR +++ +
Sbjct: 1231 WHLDHLDSASADFPYNPGQGQAIRNGVNRNSAIIGGVIAVVIFTILCTLVFLIRYMFRHK 1290
Query: 1273 KLRKENESKVSKKEE 1287
NE+K ++ E
Sbjct: 1291 GTYHTNEAKGAESAE 1305
>gi|239743797 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 944
Score = 1201 bits (3106), Expect = 0.0
Identities = 602/698 (86%), Positives = 613/698 (87%), Gaps = 40/698 (5%)
Query: 494 CLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP 553
CLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP
Sbjct: 187 CLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP 246
Query: 554 SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 613
SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG
Sbjct: 247 SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 306
Query: 614 PLGPFLVYCNMTADSAWTVVR--------------------HGGPDAVTLRGAPSGHPLS 653
PLGPFLVYCNMT SA + GG RG P P
Sbjct: 307 PLGPFLVYCNMTDRSALPLAAGLCRPVMPLLCPFLLSRLRVDGGAARWPRRGDPPRCPQW 366
Query: 654 AVSFAY----------AAGAGQ----LRAAVNLAERCEQR-----LALRCGTARRPDSRD 694
A + AAG G+ LRAA A R L ++ T + +
Sbjct: 367 APALGCVLRVRSGRGAAAGRGEPGGALRAAAGSALRDSAAPGLTSLMVKSVTFKVAFREE 426
Query: 695 -GTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVL 753
GTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAG+NEWTSDTIVL
Sbjct: 427 YGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVL 486
Query: 754 SQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGEL 813
SQKEHLPVTQIVMTD GQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGEL
Sbjct: 487 SQKEHLPVTQIVMTDAGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGEL 546
Query: 814 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 873
TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND
Sbjct: 547 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 606
Query: 874 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIR 933
NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIR
Sbjct: 607 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIR 666
Query: 934 SLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG 993
SLQLNGVALDLEERATV PGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG
Sbjct: 667 SLQLNGVALDLEERATVMPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG 726
Query: 994 PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPS 1053
PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSL+RDVTLTREMITLSFRTTR+PS
Sbjct: 727 PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPS 786
Query: 1054 LLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEA 1113
LLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEA
Sbjct: 787 LLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEA 846
Query: 1114 VVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAG 1151
VVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVL +G
Sbjct: 847 VVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLGRSG 884
Score = 123 bits (308), Expect = 1e-27
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1225 GRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSK 1284
GRSGPVDEGEPLVNADRRDSAV+GGVIAV IFILLCITAIAIRIYQQRKLRKENESKVSK
Sbjct: 881 GRSGPVDEGEPLVNADRRDSAVIGGVIAVEIFILLCITAIAIRIYQQRKLRKENESKVSK 940
Query: 1285 KEEC 1288
KEEC
Sbjct: 941 KEEC 944
Score = 48.1 bits (113), Expect = 5e-05
Identities = 59/261 (22%), Positives = 96/261 (36%), Gaps = 24/261 (9%)
Query: 334 ENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVS 393
E+L + +T+ + H +G + + +F + SYL P GE
Sbjct: 490 EHLPVTQIVMTDAGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTAD 549
Query: 394 VTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSL-FQAGQSPRNVT--AGAGLND 450
V F F+T +G +F E G F+ +++ F G P VT + ND
Sbjct: 550 VCFFFKTTVSSG--VFME-NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 606
Query: 451 GQWHSVSFSAKWSHMNVVVDD-DTAVQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSP 506
QWH V ++ VD +QP A V + + GG
Sbjct: 607 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQR------- 659
Query: 507 LGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW 566
GF GC+R + + A+D L ++ + + C C +GG C +
Sbjct: 660 --GFLGCIRSLQLNGVALD--LEERATVMPGVE---PGCAGHCSTYGHLCRNGGRCREKR 712
Query: 567 DTFSCDCLGTGYTGETCHSSL 587
+CDC + Y G C + +
Sbjct: 713 RGVTCDCAFSAYDGPFCSNEI 733
Score = 33.5 bits (75), Expect = 1.3
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 212 FKAMQSNGILLHREGQHGNHITLEL-IKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
FK S+G+ + G + I +EL ++ F + GN T+ T +D
Sbjct: 554 FKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTP-----FNDN 607
Query: 271 HWHSVLIELLDTQVNFTVDKHTHHFQ-AKGDSS-NLDLNFEISFGGILSPGRSRAFTRKS 328
WH V E + VD+ Q A D L LN ++ GG A ++
Sbjct: 608 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT-------ATRQRG 660
Query: 329 FHGCLENLYYNGV 341
F GC+ +L NGV
Sbjct: 661 FLGCIRSLQLNGV 673
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 884 bits (2284), Expect = 0.0
Identities = 455/1212 (37%), Positives = 690/1212 (56%), Gaps = 60/1212 (4%)
Query: 31 CDSPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
CD L L S +SS S P F+RL+ G GW+P + + WLQIDL ++
Sbjct: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
Query: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
+ AVATQG + S DWVT Y+L++ D +W + + F GN N +VV + L F
Sbjct: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
Query: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISL 210
AR++R +PLAWNPRG+IG+R+ +YGC YK++++YFDG A+ Y + + + DV +
Sbjct: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
Query: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
FK + +G+LLH EG G+++TLEL L+ ++ G++ + T++ G +L+DQ
Sbjct: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
Query: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFH 330
HWH V ++ VNFT+D + F GD L+L+ E+ GG++ R R +F
Sbjct: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
Query: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
GC+EN+ +N V++ +LA + +I G V+F C P P+ F +++ +PG
Sbjct: 322 GCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRG 381
Query: 391 KVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLND 450
+++V+F+FRTW+ G LLF L G G L L +G++ +S+ Q+G+ AG LND
Sbjct: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLND 441
Query: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQPLVA--VLIDSGDTYYFGGCLGNSSGSGCKSPLG 508
G WH V+F A+ +H + +DD + V+ +LI +G +Y+FGGC +S C S
Sbjct: 442 GFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQT 501
Query: 509 GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDT 568
F GC+ L+ + + V+ LV+ LG + ++ D+CGITDRC P+ CEH G C QSWD
Sbjct: 502 AFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDD 561
Query: 569 FSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTADS 628
F C C TGY GETCH+ LY++SCEA++ G SG + ID DGSGPL PF+VYC++ +
Sbjct: 562 FICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRENR 621
Query: 629 AWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYAAGAGQLRAAVNLAERCEQRLALRCGTAR 688
AWTVVRH + G+ P + A ++ A N ++ CEQ + C +R
Sbjct: 622 AWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSR 681
Query: 689 RPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQNEWTS 748
++ G P S+W+GR E H WGGS P Q+C CGL+ +C+D YCNCDA Q +W +
Sbjct: 682 LLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWRT 741
Query: 749 DTIVLSQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPA 808
D +L+ +HLPVTQ+V+ DT + SEA + L PL C GD++ WN+ SF+T + L FP
Sbjct: 742 DKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPP 800
Query: 809 FHGELTADVCFFFKTTVSSGVFMENLG------ITDFIRIELRAPTEVTFSFDVGNGPCE 862
+ DV F+F+T+ SGVF+EN+G ++R+EL +V F+FDVGNG
Sbjct: 801 IRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDEN 860
Query: 863 VTVQSPT-PFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT 921
+TV S FND++WH VRAE NVK A L+VD P ++P P ++ ++ + L++G
Sbjct: 861 LTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSA 920
Query: 922 ATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRG 981
++R F+GC+R+++LNGV L+LE RA + G P C GHC+ C +GGRC E+
Sbjct: 921 ELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSY 980
Query: 982 VTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSL---------- 1031
TCDC +A+DGP+C+++I +F G+ M Y+ Q + S + S
Sbjct: 981 YTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYI 1040
Query: 1032 -------------------------------YRD--VTLTREMITLSFRTTRSPSLLLYV 1058
YR +T E ++ SF T+ +P++LLYV
Sbjct: 1041 PGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV 1100
Query: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR--EEAVVM 1116
SSF +Y++V++ ++G+LQ+RY+L +P + + + DGQ H + I R +
Sbjct: 1101 SSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQ 1158
Query: 1117 VEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRA 1176
V+ +++ L ++ ++ K+L LG+V+E DP+ +R T GF+GCLS VRF
Sbjct: 1159 VDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNV 1218
Query: 1177 APLKAALRPSGP 1188
APLK R P
Sbjct: 1219 APLKTHFRTPRP 1230
>gi|239743729 PREDICTED: similar to contactin associated
protein-like 3B [Homo sapiens]
Length = 380
Score = 723 bits (1866), Expect = 0.0
Identities = 352/357 (98%), Positives = 354/357 (99%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCD+PLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIK K
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKRK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELL TQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLHTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMM 357
SSNLDLNFEISFGGI +PGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMM
Sbjct: 301 SSNLDLNFEISFGGIPTPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMM 357
Score = 35.4 bits (80), Expect = 0.35
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 394 VTFQFRTWNRAGHLLFGELQRGSG--------SFVLFLKDGKLKLSLFQAGQSPRNVTAG 445
++ +F+ G LL E Q G+ V FL G KL A P +T G
Sbjct: 208 ISLKFKAMQSNGILLHREGQHGNHITLELIKRKLVFFLNSGNAKLPSTIA---PVTLTLG 264
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDT 473
+ L+D WHSV + +N VD T
Sbjct: 265 SLLDDQHWHSVLIELLHTQVNFTVDKHT 292
Score = 34.7 bits (78), Expect = 0.61
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 821 FKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTP-----FNDN 874
FK S+G+ + G + I +EL ++ F + GN T+ T +D
Sbjct: 212 FKAMQSNGILLHREGQHGNHITLEL-IKRKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 875 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTAT-------RQRG 927
WH V E + VD+ Q A D L LN ++ GG T ++
Sbjct: 271 HWHSVLIELLHTQVNFTVDKHTHHFQ-AKGDSS-NLDLNFEISFGGIPTPGRSRAFTRKS 328
Query: 928 FLGCIRSLQLNGV 940
F GC+ +L NGV
Sbjct: 329 FHGCLENLYYNGV 341
>gi|169184330 PREDICTED: novel protein similar to contactin associated
protein-like 3 (CNTNAP3) [Homo sapiens]
Length = 291
Score = 550 bits (1416), Expect = e-156
Identities = 284/290 (97%), Positives = 288/290 (99%)
Query: 999 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV 1058
+ISAYFATGSSMTYHFQEHYTLSENSSSLVSSL+RDVTLTREMITLSFRTTR+PSLLLYV
Sbjct: 2 KISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYV 61
Query: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1118
SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE
Sbjct: 62 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 121
Query: 1119 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1178
VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFG AAP
Sbjct: 122 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGCAAP 181
Query: 1179 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 1238
LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN
Sbjct: 182 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 241
Query: 1239 ADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ADRRDSAV+GGVIAV IFILLCITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 242 ADRRDSAVIGGVIAVEIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 291
>gi|239758135 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 140
Score = 265 bits (678), Expect = 2e-70
Identities = 136/138 (98%), Positives = 138/138 (100%)
Query: 1010 MTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVI 1069
MTYHFQEHYTLSENSSSLVSSL+RDVTLTREMITLSFRTTR+PSLLLYVSSFYEEYLSVI
Sbjct: 1 MTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVI 60
Query: 1070 LANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVIL 1129
LANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVIL
Sbjct: 61 LANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVIL 120
Query: 1130 SSGTEFNAVKSLILGKVL 1147
SSGTEFNAVKSLILGKVL
Sbjct: 121 SSGTEFNAVKSLILGKVL 138
>gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens]
Length = 1477
Score = 216 bits (549), Expect = 1e-55
Identities = 253/1062 (23%), Positives = 436/1062 (41%), Gaps = 189/1062 (17%)
Query: 183 VVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
+ F G Y L + P++ D I+L FK +Q NG++LH G+ +++ L L G +
Sbjct: 283 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 341
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIEL----------------LD----- 281
+N G+ + + PV +D WH V + +D
Sbjct: 342 LVINLGSGAFEALVEPVN----GKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTT 397
Query: 282 ---TQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYY 338
TQ ++T+ F G S DL PG +F GCL+ + Y
Sbjct: 398 TGYTQEDYTMLGSDDFFYVGGSPSTADL-----------PGSP---VSNNFMGCLKEVVY 443
Query: 339 NGVDV----TELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVS 393
DV + LAK+ P++ + G V+F C T+ P+TF + S+++LP + + S
Sbjct: 444 KNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGS 503
Query: 394 VTFQFRTWNRAGHLLF--GELQRGSGS----------FVLFLKDGKLKLSLFQAGQSPRN 441
++F FRT G +LF G+ + + F + + DG L L L + +
Sbjct: 504 ISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKI 563
Query: 442 VTAGAGLNDGQWHSVSFSAKWSHMNVVVDD--DTAVQPLVAVLIDSGDTYYFGGCLGNSS 499
+NDG+W+ V F + V+ P + ++D D Y GG N +
Sbjct: 564 KALLKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKA 623
Query: 500 GSGCKSPLG------GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDR-CL 552
G + + G+ GC+R + I ++ D + Q + S ++ T + CL
Sbjct: 624 GLVFPTEVWTALLNYGYVGCIRDLFIDGQSKD--IRQMAEVQSTAGVKPSCSKETAKPCL 681
Query: 553 PSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGS 612
+ C++ G C W+ + CDC GTGY G +SCE + DGS
Sbjct: 682 SNPCKNNGMCRDGWNRYVCDCSGTGYLG---------RSCEREAT--------VLSYDGS 724
Query: 613 GPLGPFLVYCNMTADSAWTVVRHGGPDAVTLR-GAPSGHPL--------SAVSFAYAAGA 663
M VV H + V+LR + + + SA + A
Sbjct: 725 -----------MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDA 773
Query: 664 GQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHT--------SWGGS 715
G+++ VNL + + C +++ P+ T + + NE HT S +
Sbjct: 774 GRVKLTVNL-----DCIRINCNSSKGPE----TLFAGYNLNDNEWHTVRVVRRGKSLKLT 824
Query: 716 LPDAQKCTCGLEGNCIDSQYYCNCDAG---QNEWTSD--TIVLSQKEHLPVTQIVMTDTG 770
+ D Q T + G+ +++ N + G + + S + + + L + D
Sbjct: 825 VDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLC 883
Query: 771 QPHSEADYTLGPLLCRGDKSFW------NSASFNTETSYLHFPAFHGELTADVCFFFKTT 824
+ + + DY C + F + +F T++SY+ + + F FKTT
Sbjct: 884 K-NGDIDY------CELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTT 936
Query: 825 VSSGVFMENLGI-TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAER 883
G+ + N G DFI +EL + + FD+GNG + S P NDNQWH+V R
Sbjct: 937 SLDGLILYNSGDGNDFIVVEL-VKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISR 995
Query: 884 NVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR-----------QRGFLGCI 932
+ ++L ++ K+ G L L S L+IGG A + GF GC+
Sbjct: 996 DT--SNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCL 1053
Query: 933 RSLQLNGVALDLEERATVTPG-VEPGCAGHCST-YGHLCRNGGRCREKRRGVTCDCAFSA 990
S+ LNG DL A G +E GC G +T C N G C ++ G +CDC+ ++
Sbjct: 1054 ASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTS 1113
Query: 991 YDGPFCSNEISAYFAT--GSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRT 1048
+ GP C++ + Y + G +TY + + S + + + + F T
Sbjct: 1114 FSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRA---------------DRLAIGFST 1158
Query: 1049 TRSPSLLLYV--SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKN--MADGQLH 1104
+ ++L+ V SS +YL + + + G + +++ + D + N + DG+ H
Sbjct: 1159 VQKEAVLVRVDSSSGLGDYLELHI-HQGKIGVKFNV----GTDDIAIEESNAIINDGKYH 1213
Query: 1105 QVKINRE--EAVVMVEVNQSAKKQVILSSGTEFNAVKSLILG 1144
V+ R A + V+ ++ T FN+ ++I+G
Sbjct: 1214 VVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIG 1255
Score = 120 bits (301), Expect = 8e-27
Identities = 115/419 (27%), Positives = 182/419 (43%), Gaps = 21/419 (5%)
Query: 177 CAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + L DV SL+F++ ++ GIL+ + + + LE
Sbjct: 712 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 770
Query: 236 LIKGKLVFFLNSGNAKLP--STIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVD-KHT 292
L G++ +N ++ S+ P TL G L+D WH+V + + TVD +
Sbjct: 771 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 830
Query: 293 HHFQAKGDSSNLDL-NFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHK 351
Q GD + L+ N E GI++ R + +F G L++L +NG+ +L K
Sbjct: 831 MTGQMAGDHTRLEFHNIET---GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGD 887
Query: 352 PQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGE 411
+ N F PVTF + SY+AL + + FQF+T + G +L+
Sbjct: 888 IDYCEL-NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS 946
Query: 412 LQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVVV 469
G+ V+ L G L +F G + + LND QWH+V S S+++ V
Sbjct: 947 GD-GNDFIVVELVKGYLHY-VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVK 1004
Query: 470 DDDTAVQPLVAVL--IDSGDTYYFGGCLGNSSGSGCK--SPLGGFQGCLRLITIGDKAVD 525
D + A +D Y GG + S K GFQGCL + + + D
Sbjct: 1005 IDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD 1064
Query: 526 PILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q WD FSCDC T ++G C+
Sbjct: 1065 LI---SDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1120
Score = 73.2 bits (178), Expect = 2e-12
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 36/305 (11%)
Query: 800 ETSYLHFPAFHGELTADVCFFFKTTVSSGV--FMENLGITDFIRIELRAPTEVTFSFDVG 857
E + FP ++ +++ F KT + G+ + ++ G DF+ + L + SF +
Sbjct: 37 EGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIF 96
Query: 858 NGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLF 917
T+ + TP ND WH VR R + +L +DQ+ K + + + S LF
Sbjct: 97 CAE-PATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRR-DMTVFSGLF 154
Query: 918 IGG--------------TATRQR-GFLGCIRSLQLNGV--------ALDLEERATVTPGV 954
+GG + R+R F G IR +++N + L++ + G
Sbjct: 155 VGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGG 214
Query: 955 EPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEIS-----AYFATGSS 1009
P AG G +C NGG C CDC+ + + G CS E + A+ G
Sbjct: 215 SPCEAGE-EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQ 273
Query: 1010 MTYHFQEHY--TLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLS 1067
+E Y T + + + + ITLSF+T + L+L+ +Y++
Sbjct: 274 GKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGK-SADYVN 332
Query: 1068 VILAN 1072
+ L N
Sbjct: 333 LALKN 337
Score = 47.8 bits (112), Expect = 7e-05
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 394 VTFQFRTWNRAGHLLFGELQRGSGSFV--LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDG 451
++FQ +T + G +L+ + G F+ + + G+L+LS P + A +NDG
Sbjct: 54 MSFQLKTRSARGLVLYFD-DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDG 112
Query: 452 QWHSVSFSAKWSHMNVVVDDDTAVQPLVA-----VLIDSGDTYYFGGCLGNSSGSGCKSP 506
WHSV ++ + + +D A V + + SG + GG + K
Sbjct: 113 AWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSG--LFVGGLPPELRAAALKLT 170
Query: 507 LGG------FQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDS----------CGITDR 550
L F+G +R + + V P+ ++++D C +
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLPV--------DSGEVKLDDEPPNSGGGSPCEAGEE 222
Query: 551 CLPSYCEHGGECSQSWDTFSCDCLGTGYTGETC 583
C +GG CS D CDC TG+ G+ C
Sbjct: 223 GEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 42.4 bits (98), Expect = 0.003
Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 50/272 (18%)
Query: 706 NETHTSWGGSLPDAQK------CTCGLEGNCIDSQYYCNCDA----GQNEWTSDTIVLSQ 755
+E S GGS +A + C G + +D Q C+C G++ D V
Sbjct: 206 DEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEG- 264
Query: 756 KEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTA 815
+ ++M D G+ + +Y +F S F + S + E+T
Sbjct: 265 -----LAHLMMGDQGKSKGKEEYIA---------TFKGSEYFCYDLSQNPIQSSSDEITL 310
Query: 816 DVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPT-PFNDN 874
FKT +G+ + D++ + L+ V+ ++G+G E V+ FNDN
Sbjct: 311 S----FKTLQRNGLMLHTGKSADYVNLALKNGA-VSLVINLGSGAFEALVEPVNGKFNDN 365
Query: 875 QWHHVRAERNVKGAS--------LQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR-- 924
WH V+ RN++ S + VD + D + L + ++GG+ +
Sbjct: 366 AWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQED-YTMLGSDDFFYVGGSPSTAD 424
Query: 925 ------QRGFLGCIRSL--QLNGVALDLEERA 948
F+GC++ + + N V L+L A
Sbjct: 425 LPGSPVSNNFMGCLKEVVYKNNDVRLELSRLA 456
Score = 34.7 bits (78), Expect = 0.61
Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 16/181 (8%)
Query: 206 DVISLKFKAMQSNGILLHREGQHG--NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTL 263
D +++ F +Q +L+ + G +++ L + +GK+ N G + +
Sbjct: 1150 DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEES------ 1203
Query: 264 GSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRA 323
++++D +H V VD + + L S I+ G+ +
Sbjct: 1204 NAIINDGKYHVVRFTRSGGNATLQVDSWP---VIERYPAGRQLTIFNSQATIIIGGKEQG 1260
Query: 324 FTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNVSF--SCPQPQTVPVTFLSSRSYL 381
+ F G L LYYNG+ V +A ++ I ++GNV P T T + +S +
Sbjct: 1261 ---QPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEM 1317
Query: 382 A 382
+
Sbjct: 1318 S 1318
>gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens]
Length = 1547
Score = 214 bits (545), Expect = 4e-55
Identities = 248/1032 (24%), Positives = 427/1032 (41%), Gaps = 172/1032 (16%)
Query: 183 VVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
+ F G Y L + P++ D I+L FK +Q NG++LH G+ +++ L L G +
Sbjct: 316 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 374
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSV---------------LIELLDTQVNFT 287
+N G+ + + PV +D WH V ++ L V +
Sbjct: 375 LVINLGSGAFEALVEPVN----GKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTIS 430
Query: 288 VDKH-THHFQAKGDSSNLDLNFEISFGGILS----PGRSRAFTRKSFHGCLENLYYNGVD 342
VD T + D + L + GG S PG +F GCL+ + Y D
Sbjct: 431 VDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSP---VSNNFMGCLKEVVYKNND 487
Query: 343 V----TELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQ 397
V + LAK+ P++ + G V+F C T+ P+TF + S+++LP + + S++F
Sbjct: 488 VRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFD 547
Query: 398 FRTWNRAGHLLF--GELQRGSGS----------FVLFLKDGKLKLSLFQAGQSPRNVTAG 445
FRT G +LF G+ + + F + + DG L L L + +
Sbjct: 548 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 607
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDD--DTAVQPLVAVLIDSGDTYYFGGCLGNSSGSGC 503
+NDG+W+ V F + V+ P + ++D D Y GG N +G
Sbjct: 608 KKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVF 667
Query: 504 KSPLG------GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDR-CLPSYC 556
+ + G+ GC+R + I ++ D + Q + S ++ T + CL + C
Sbjct: 668 PTEVWTALLNYGYVGCIRDLFIDGQSKD--IRQMAEVQSTAGVKPSCSKETAKPCLSNPC 725
Query: 557 EHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLG 616
++ G C W+ + CDC GTGY G +SCE + DGS
Sbjct: 726 KNNGMCRDGWNRYVCDCSGTGYLG---------RSCEREAT--------VLSYDGS---- 764
Query: 617 PFLVYCNMTADSAWTVVRHGGPDAVTLR-GAPSGHPL--------SAVSFAYAAGAGQLR 667
M VV H + V+LR + + + SA + AG+++
Sbjct: 765 -------MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVK 817
Query: 668 AAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHT--------SWGGSLPDA 719
VNL + + C +++ P+ T + + NE HT S ++ D
Sbjct: 818 LTVNL-----DCIRINCNSSKGPE----TLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQ 868
Query: 720 QKCTCGLEGNCIDSQYYCNCDAG---QNEWTSD--TIVLSQKEHLPVTQIVMTDTGQPHS 774
Q T + G+ +++ N + G + + S + + + L + D + +
Sbjct: 869 QAMTGQMAGDHTRLEFH-NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCK-NG 926
Query: 775 EADYTLGPLLCRGDKSFW------NSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSG 828
+ DY C + F + +F T++SY+ + + F FKTT G
Sbjct: 927 DIDY------CELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDG 980
Query: 829 VFMENLGI-TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKG 887
+ + N G DFI +EL + + FD+GNG + S P NDNQWH+V R+
Sbjct: 981 LILYNSGDGNDFIVVEL-VKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDT-- 1037
Query: 888 ASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR-----------QRGFLGCIRSLQ 936
++L ++ K+ G L L S L+IGG A + GF GC+ S+
Sbjct: 1038 SNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVD 1097
Query: 937 LNGVALDLEERATVTPG-VEPGCAGHCST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGP 994
LNG DL A G +E GC G +T C N G C ++ G +CDC+ +++ GP
Sbjct: 1098 LNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP 1157
Query: 995 FCSNEISAYFAT--GSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSP 1052
C++ + Y + G +TY + + S + + + + F T +
Sbjct: 1158 LCNDPGTTYIFSKGGGQITYKWPPNDRPSTRA---------------DRLAIGFSTVQKE 1202
Query: 1053 SLLLYV--SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKN--MADGQLHQVKI 1108
++L+ V SS +YL + + + G + +++ + D + N + DG+ H V+
Sbjct: 1203 AVLVRVDSSSGLGDYLELHI-HQGKIGVKFNV----GTDDIAIEESNAIINDGKYHVVRF 1257
Query: 1109 NREEAVVMVEVN 1120
R ++V+
Sbjct: 1258 TRSGGNATLQVD 1269
Score = 120 bits (301), Expect = 8e-27
Identities = 115/419 (27%), Positives = 182/419 (43%), Gaps = 21/419 (5%)
Query: 177 CAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + L DV SL+F++ ++ GIL+ + + + LE
Sbjct: 752 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 810
Query: 236 LIKGKLVFFLNSGNAKLP--STIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVD-KHT 292
L G++ +N ++ S+ P TL G L+D WH+V + + TVD +
Sbjct: 811 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 870
Query: 293 HHFQAKGDSSNLDL-NFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHK 351
Q GD + L+ N E GI++ R + +F G L++L +NG+ +L K
Sbjct: 871 MTGQMAGDHTRLEFHNIET---GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGD 927
Query: 352 PQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGE 411
+ N F PVTF + SY+AL + + FQF+T + G +L+
Sbjct: 928 IDYCEL-NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS 986
Query: 412 LQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVVV 469
G+ V+ L G L +F G + + LND QWH+V S S+++ V
Sbjct: 987 GD-GNDFIVVELVKGYLHY-VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVK 1044
Query: 470 DDDTAVQPLVAVL--IDSGDTYYFGGCLGNSSGSGCK--SPLGGFQGCLRLITIGDKAVD 525
D + A +D Y GG + S K GFQGCL + + + D
Sbjct: 1045 IDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD 1104
Query: 526 PILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q WD FSCDC T ++G C+
Sbjct: 1105 LI---SDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1160
Score = 67.8 bits (164), Expect = 6e-11
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 800 ETSYLHFPAFHGELTADVCFFFKTTVSSGV--FMENLGITDFIRIELRAPTEVTFSFDVG 857
E + FP ++ +++ F KT + G+ + ++ G DF+ + L + SF +
Sbjct: 37 EGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIF 96
Query: 858 NGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLF 917
T+ + TP ND WH VR R + +L +DQ+ K + + + S LF
Sbjct: 97 CAE-PATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRR-DMTVFSGLF 154
Query: 918 IGG--------------TATRQR-GFLGCIRSLQLNGV--------ALDLEERATVTPGV 954
+GG + R+R F G IR +++N + L++ + G
Sbjct: 155 VGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGG 214
Query: 955 EPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEI 1000
P AG G +C NGG C CDC+ + + G CS EI
Sbjct: 215 SPCEAGE-EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEI 259
Score = 48.1 bits (113), Expect = 5e-05
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 34/217 (15%)
Query: 394 VTFQFRTWNRAGHLLFGELQRGSGSFV--LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDG 451
++FQ +T + G +L+ + G F+ + + G+L+LS P + A +NDG
Sbjct: 54 MSFQLKTRSARGLVLYFD-DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDG 112
Query: 452 QWHSVSFSAKWSHMNVVVDDDTAVQPLVA-----VLIDSGDTYYFGGCLGNSSGSGCKSP 506
WHSV ++ + + +D A V + + SG + GG + K
Sbjct: 113 AWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSG--LFVGGLPPELRAAALKLT 170
Query: 507 LGG------FQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDS----------CGITDR 550
L F+G +R + + V P+ ++++D C +
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLPV--------DSGEVKLDDEPPNSGGGSPCEAGEE 222
Query: 551 CLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 587
C +GG CS D CDC TG+ G+ C +
Sbjct: 223 GEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEI 259
Score = 39.3 bits (90), Expect = 0.025
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 34/210 (16%)
Query: 706 NETHTSWGGSLPDAQK------CTCGLEGNCIDSQYYCNCDAG--QNEWTSDTIVLSQKE 757
+E S GGS +A + C G + +D Q C+C + + S I +
Sbjct: 206 DEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEIKFGLQC 265
Query: 758 HLPVT-------QIVMTDTGQPHSEADYTLGPL--LCRGDK-----------SFWNSASF 797
LPV + +T +P +E D + L L GD+ +F S F
Sbjct: 266 VLPVLLHDNDQGKYCCINTAKPLTEKDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYF 325
Query: 798 NTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVG 857
+ S + E+T FKT +G+ + D++ + L+ V+ ++G
Sbjct: 326 CYDLSQNPIQSSSDEITLS----FKTLQRNGLMLHTGKSADYVNLALKNGA-VSLVINLG 380
Query: 858 NGPCEVTVQSPT-PFNDNQWHHVRAERNVK 886
+G E V+ FNDN WH V+ RN++
Sbjct: 381 SGAFEALVEPVNGKFNDNAWHDVKVTRNLR 410
Score = 32.7 bits (73), Expect = 2.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 329 FHGCLENLYYNGVDVTELAKKHKPQILMMGNVSF--SCPQPQTVPVTFLSSRSYLA 382
F G L LYYNG+ V +A ++ I ++GNV P T T + +S ++
Sbjct: 1333 FQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMS 1388
Score = 31.6 bits (70), Expect = 5.1
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQ 894
G+ D++ + + ++ F+VG + +S ND ++H VR R+ A+LQVD
Sbjct: 1213 GLGDYLELHIHQG-KIGVKFNVGTDDIAIE-ESNAIINDGKYHVVRFTRSGGNATLQVDS 1270
Query: 895 LPQ-KMQPAPADGHVRLQLNSQ 915
P + PA + + RL + Q
Sbjct: 1271 WPVIERYPAGNNDNERLAIARQ 1292
>gi|239752499 PREDICTED: similar to cell recognition molecule Caspr2,
partial [Homo sapiens]
Length = 140
Score = 146 bits (368), Expect = 1e-34
Identities = 74/74 (100%), Positives = 74/74 (100%)
Query: 1074 GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGT 1133
GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGT
Sbjct: 2 GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGT 61
Query: 1134 EFNAVKSLILGKVL 1147
EFNAVKSLILGKVL
Sbjct: 62 EFNAVKSLILGKVL 75
>gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens]
Length = 1642
Score = 135 bits (341), Expect = 2e-31
Identities = 119/446 (26%), Positives = 191/446 (42%), Gaps = 60/446 (13%)
Query: 183 VVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
V F G Y L P++ D I+L F+ +Q NG++LH G+ +++ L L G +
Sbjct: 265 VATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVW 323
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIE--------LLDTQVNFTVDKH-TH 293
+N G+ + + PV +D WH V + + V +VD T
Sbjct: 324 LVINLGSGAFEALVEPVN----GKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTT 379
Query: 294 HFQAKGDSSNLDLNFEISFGGILSPGRSR---AFTRKSFHGCLENLYYNGVD----VTEL 346
+ D + L + GG SP + + +F GCL+++ Y D ++ L
Sbjct: 380 TGYTQEDYTMLGSDDFFYIGG--SPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRL 437
Query: 347 AKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAG 405
AK+ P++ + G++SF C + PVTF S +++ALP S + S++ FRT G
Sbjct: 438 AKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNG 497
Query: 406 HLLFGELQRGSGS------------FVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQW 453
LLF + +R G F + L DG L L L + + +NDG+W
Sbjct: 498 LLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASSRKVNDGEW 557
Query: 454 HSVSFSAKWSHMNVVVDDDTAVQPLVAV----LIDSGDTYYFGGCLGNSSGSGCKSPL-- 507
V F ++ V+ + P +A ++D Y GG G PL
Sbjct: 558 CHVDFQRDGRKGSISVNSRST--PFLATGDSEILDLESELYLGGL---PEGGRVDLPLPP 612
Query: 508 --------GGFQGCLRLITIGDKAVD--PILVQQGALGSFRDLQIDSCGITDRCLPSYCE 557
G+ GC+R + I ++ D + QGA+G S +C + C
Sbjct: 613 EVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGV---APFCSRETLKQCASAPCR 669
Query: 558 HGGECSQSWDTFSCDCLGTGYTGETC 583
+GG C + W+ F CDC+GTG+ G C
Sbjct: 670 NGGVCREGWNRFICDCIGTGFLGRVC 695
Score = 118 bits (295), Expect = 4e-26
Identities = 112/415 (26%), Positives = 173/415 (41%), Gaps = 23/415 (5%)
Query: 177 CAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + L DV SL+F + ++ G+++ + + + LE
Sbjct: 695 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 753
Query: 236 LIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHF 295
L G++ +N G P TL G L+D WH+V + + +VD T
Sbjct: 754 LDGGQMKLTVNLGKG-------PETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEG 806
Query: 296 QAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQIL 355
Q G +++ L F GI++ R + +F G L L +NG + K
Sbjct: 807 QMAG--AHMRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYC 864
Query: 356 MMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRG 415
+ N F PVTF S SYLAL + + FQF+T G LLF G
Sbjct: 865 EL-NARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS-GNG 922
Query: 416 SGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVV-VDDD 472
+ V+ L G + +F G P + + +ND QWH+V S +++ + +D
Sbjct: 923 NDFIVIELVKGYIHY-VFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSR 981
Query: 473 TAVQPLVAVL-IDSGDTYYFGGCLGNSSGSGCK--SPLGGFQGCLRLITIGDKAVDPILV 529
T Q +D Y GG N + K + GFQGCL + + + D I
Sbjct: 982 TVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIA- 1040
Query: 530 QQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
AL ++ G + C C + G C Q WD F+CDC T Y G C+
Sbjct: 1041 --DALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCN 1093
Score = 111 bits (278), Expect = 4e-24
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 43/345 (12%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI-TDFIRIELRAPTEVTFSF 854
+F + +SYL + + F FKTT G+ + N G DFI IEL + + F
Sbjct: 881 TFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIEL-VKGYIHYVF 939
Query: 855 DVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNS 914
D+GNGP + S P NDNQWH+V R+ ++ ++ + ++G L L
Sbjct: 940 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRD--PGNVHTLKIDSRTVTQHSNGARNLDLKG 997
Query: 915 QLFIGGTA-----------TRQRGFLGCIRSLQLNGVALDLEERATVTPG-VEPGCAGHC 962
+L+IGG + + GF GC+ S+ LNG DL A G VE GC G
Sbjct: 998 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1057
Query: 963 ST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAY-FATGSSMTYHFQEHYTL 1020
+T C N G C ++ G TCDC ++Y GP C++ + Y F G ++ YT
Sbjct: 1058 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI-----TYTW 1112
Query: 1021 SENSSSLVSSLYRDVTLTR-EMITLSFRTTRSPSLLLYV--SSFYEEYLSVILANNGSLQ 1077
N D TR + + + F T + ++L+ V +S +YL + + + G++
Sbjct: 1113 PPN----------DRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVG 1161
Query: 1078 IRYKLDRHQNPDAFTFDFKN--MADGQLHQVKINREEAVVMVEVN 1120
+ + + D T D N ++DG+ H V+ R ++V+
Sbjct: 1162 VIFNV----GTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1202
Score = 74.3 bits (181), Expect = 7e-13
Identities = 81/370 (21%), Positives = 152/370 (41%), Gaps = 63/370 (17%)
Query: 788 DKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI----------- 836
D + + +F + +++ P + + T + F+TT +G+ + + G
Sbjct: 457 DVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGGGAGSHSS 516
Query: 837 ---TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVD 893
D+ +EL + D+G+G ++ S ND +W HV +R+ + S+ V+
Sbjct: 517 AQRADYFAMEL-LDGHLYLLLDMGSGGIKLRASS-RKVNDGEWCHVDFQRDGRKGSISVN 574
Query: 894 QLPQKMQPAPADGHVR-LQLNSQLFIGG----------------TATRQRGFLGCIRSLQ 936
+ P A G L L S+L++GG TA + G++GC+R L
Sbjct: 575 S---RSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLF 631
Query: 937 LNGVALDLEERATV--TPGVEPGCAGH----CSTYGHLCRNGGRCREKRRGVTCDCAFSA 990
++G + DL A GV P C+ C++ CRNGG CRE CDC +
Sbjct: 632 IDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAP--CRNGGVCREGWNRFICDCIGTG 689
Query: 991 YDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTR 1050
+ G C E + GS L ++++ + E ++L F + R
Sbjct: 690 FLGRVCEREATVLSYDGSMYM------------KIMLPNAMHTEA----EDVSLRFMSQR 733
Query: 1051 SPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR 1110
+ L++ +S E + Q++ ++ + P+ F + D + H V++ R
Sbjct: 734 AYGLMMATTS--RESADTLRLELDGGQMKLTVNLGKGPETL-FAGHKLNDNEWHTVRVVR 790
Query: 1111 EEAVVMVEVN 1120
+ + V+
Sbjct: 791 RGKSLQLSVD 800
Score = 55.1 bits (131), Expect = 4e-07
Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 36/218 (16%)
Query: 864 TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG--- 920
T+Q TP D++WH V R+ + +L VD + +Q+ S LF+GG
Sbjct: 100 TLQLDTPVADDRWHMVLLTRDARRTALAVD--GEARAAEVRSKRREMQVASDLFVGGIPP 157
Query: 921 ----------TATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGH-----CSTY 965
T + F G + +L+L ER G + G G C+
Sbjct: 158 DVRLSALTLSTVKYEPPFRGLLANLKLG-------ERPPALLGSQ-GLRGATADPLCAPA 209
Query: 966 GHLCRNGGRCREKRRG-VTCDCAFSAYDGPFCSNEI-----SAYFATGSSMTYHFQEHYT 1019
+ C NGG C G V CDC+ + + G FCS E A+ S F T
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEGKEEFVA--T 267
Query: 1020 LSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLY 1057
N + + + + ITL+FRT + L+L+
Sbjct: 268 FKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLH 305
Score = 47.0 bits (110), Expect = 1e-04
Identities = 84/381 (22%), Positives = 138/381 (36%), Gaps = 71/381 (18%)
Query: 808 AFHGELTADVCFFFKTTVSSGVFMENLG--ITDFIRIELRAPTEVTFSFDVGNGPCEVTV 865
A H E DV F + + G+ M D +R+EL ++ + ++G GP T+
Sbjct: 717 AMHTE-AEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG-QMKLTVNLGKGP--ETL 772
Query: 866 QSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQ 925
+ NDN+WH VR R K L VD + + Q A A H+RL+ ++ G T +
Sbjct: 773 FAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMAGA--HMRLEFHN--IETGIMTER 828
Query: 926 R-------GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREK 978
R F+G + L NG Y C++G
Sbjct: 829 RFISVVPSNFIGHLSGLVFNG-----------------------QPYMDQCKDG------ 859
Query: 979 RRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLT 1038
D +C E++A F + + + T SS L + +
Sbjct: 860 -------------DITYC--ELNARFGLRAIVA----DPVTFKSRSSYLALATLQ--AYA 898
Query: 1039 REMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDF-KN 1097
+ F+TT LLL+ S +++ + L I Y D P + K
Sbjct: 899 SMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG---YIHYVFDLGNGPSLMKGNSDKP 955
Query: 1098 MADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTR 1157
+ D Q H V ++R+ V S + + L +G + + ++
Sbjct: 956 VNDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKL 1015
Query: 1158 RAATSGFTGCLSAVRFGRAAP 1178
A+ GF GCL++V P
Sbjct: 1016 VASRDGFQGCLASVDLNGRLP 1036
Score = 40.0 bits (92), Expect = 0.014
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 814 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPT-PFN 872
T ++ F+T +G+ + D++ + L++ V ++G+G E V+ FN
Sbjct: 287 TDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGA-VWLVINLGSGAFEALVEPVNGKFN 345
Query: 873 DNQWHHVRAERNVK 886
DN WH VR RN++
Sbjct: 346 DNAWHDVRVTRNLR 359
Score = 38.9 bits (89), Expect = 0.032
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 1042 ITLSFRTTRSPSLLLYVSSFYE-EYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMAD 1100
++ S RT + +LLLY+ + ++L ++L + G L++R+ L + P D +AD
Sbjct: 53 LSFSLRTNATRALLLYLDDGGDCDFLELLLVD-GRLRLRFTLSCAE-PATLQLDTP-VAD 109
Query: 1101 GQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAA 1160
+ H V + R+ + V+ A+ + S E L +G G PD R +A
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVG------GIPPDVRLSA 163
Query: 1161 TS--------GFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMAR-CAAG 1206
+ F G L+ ++ G P A L G T AP CA G
Sbjct: 164 LTLSTVKYEPPFRGLLANLKLGERPP--ALLGSQGLRGATADPLCAPARNPCANG 216
Score = 36.2 bits (82), Expect = 0.21
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPF-NDNQWHHVRAERNVKGASLQVD 893
G+ D++++ + T V F+VG ++T+ P +D ++H VR R+ A+LQVD
Sbjct: 1146 GLGDYLQLHIDQGT-VGVIFNVGTD--DITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1202
Query: 894 QLP-QKMQPAPADGHVRLQLNSQLFIG-GTATRQRGFLGCIRSLQLNGV 940
P + PA G NSQ I G + R F G + L NG+
Sbjct: 1203 SWPVNERYPA---GRQLTIFNSQAAIKIGGRDQGRPFQGQVSGLYYNGL 1248
Score = 35.4 bits (80), Expect = 0.35
Identities = 48/219 (21%), Positives = 81/219 (36%), Gaps = 23/219 (10%)
Query: 386 NSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAG 445
+SGE ++F RT LL+ + L L DG+L+L + P +
Sbjct: 49 SSGE----LSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLD 104
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVL--IDSGDTYYFGGCLGNSSGSGC 503
+ D +WH V + + VD + + + + + GG + S
Sbjct: 105 TPVADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSAL 164
Query: 504 KSPL----GGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSY--CE 557
F+G L + +G++ +L QG G+ D C P+ C
Sbjct: 165 TLSTVKYEPPFRGLLANLKLGERP-PALLGSQGLRGATAD---------PLCAPARNPCA 214
Query: 558 HGGECSQ-SWDTFSCDCLGTGYTGETCHSSLYEQSCEAH 595
+GG C+ + CDC TG+ G+ C + AH
Sbjct: 215 NGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAH 253
Score = 32.3 bits (72), Expect = 3.0
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 241 LVFFLNSGNAKLPSTIA---PVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQA 297
L L G +L T++ P TL L + + D WH VL+ + VD +
Sbjct: 78 LELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRDARRTALAVDGEARAAEV 137
Query: 298 KGDSSNLDLNFEISFGGILSPGRSRAFTRKS------FHGCLENL 336
+ + + ++ GGI R A T + F G L NL
Sbjct: 138 RSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLANL 182
>gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens]
Length = 1712
Score = 135 bits (339), Expect = 3e-31
Identities = 120/453 (26%), Positives = 192/453 (42%), Gaps = 67/453 (14%)
Query: 183 VVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
V F G Y L P++ D I+L F+ +Q NG++LH G+ +++ L L G +
Sbjct: 289 VATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVW 347
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSV---------------LIELLDTQVNFT 287
+N G+ + + PV +D WH V ++ L V +
Sbjct: 348 LVINLGSGAFEALVEPVN----GKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTIS 403
Query: 288 VDKH-THHFQAKGDSSNLDLNFEISFGGILSPGRSR---AFTRKSFHGCLENLYYNGVD- 342
VD T + D + L + GG SP + + +F GCL+++ Y D
Sbjct: 404 VDGILTTTGYTQEDYTMLGSDDFFYIGG--SPNTADLPGSPVSNNFMGCLKDVVYKNNDF 461
Query: 343 ---VTELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQF 398
++ LAK+ P++ + G++SF C + PVTF S +++ALP S + S++ F
Sbjct: 462 KLELSRLAKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDF 521
Query: 399 RTWNRAGHLLFGELQRGSGS------------FVLFLKDGKLKLSLFQAGQSPRNVTAGA 446
RT G LLF + +R G F + L DG L L L + +
Sbjct: 522 RTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASSR 581
Query: 447 GLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAV----LIDSGDTYYFGGCLGNSSGSG 502
+NDG+W V F ++ V+ + P +A ++D Y GG G
Sbjct: 582 KVNDGEWCHVDFQRDGRKGSISVNSRST--PFLATGDSEILDLESELYLGGL---PEGGR 636
Query: 503 CKSPL----------GGFQGCLRLITIGDKAVD--PILVQQGALGSFRDLQIDSCGITDR 550
PL G+ GC+R + I ++ D + QGA+G S +
Sbjct: 637 VDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGV---APFCSRETLKQ 693
Query: 551 CLPSYCEHGGECSQSWDTFSCDCLGTGYTGETC 583
C + C +GG C + W+ F CDC+GTG+ G C
Sbjct: 694 CASAPCRNGGVCREGWNRFICDCIGTGFLGRVC 726
Score = 115 bits (289), Expect = 2e-25
Identities = 113/418 (27%), Positives = 176/418 (42%), Gaps = 20/418 (4%)
Query: 177 CAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + L DV SL+F + ++ G+++ + + + LE
Sbjct: 726 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 784
Query: 236 LIKGKLVFFLNSGNAKL---PSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHT 292
L G++ +N ++ PS P TL G L+D WH+V + + +VD T
Sbjct: 785 LDGGQMKLTVNLDCLRVGCAPSK-GPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVT 843
Query: 293 HHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKP 352
Q G +++ L F GI++ R + +F G L L +NG + K
Sbjct: 844 VEGQMAG--AHMRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDI 901
Query: 353 QILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL 412
+ N F PVTF S SYLAL + + FQF+T G LLF
Sbjct: 902 TYCEL-NARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS- 959
Query: 413 QRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVV-V 469
G+ V+ L G + +F G P + + +ND QWH+V S +++ + +
Sbjct: 960 GNGNDFIVIELVKGYIHY-VFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKI 1018
Query: 470 DDDTAVQPLVAVL-IDSGDTYYFGGCLGNSSGSGCK--SPLGGFQGCLRLITIGDKAVDP 526
D T Q +D Y GG N + K + GFQGCL + + + D
Sbjct: 1019 DSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDL 1078
Query: 527 ILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q WD F+CDC T Y G C+
Sbjct: 1079 IA---DALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCN 1133
Score = 111 bits (278), Expect = 4e-24
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 43/345 (12%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI-TDFIRIELRAPTEVTFSF 854
+F + +SYL + + F FKTT G+ + N G DFI IEL + + F
Sbjct: 921 TFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIEL-VKGYIHYVF 979
Query: 855 DVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNS 914
D+GNGP + S P NDNQWH+V R+ ++ ++ + ++G L L
Sbjct: 980 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRD--PGNVHTLKIDSRTVTQHSNGARNLDLKG 1037
Query: 915 QLFIGGTA-----------TRQRGFLGCIRSLQLNGVALDLEERATVTPG-VEPGCAGHC 962
+L+IGG + + GF GC+ S+ LNG DL A G VE GC G
Sbjct: 1038 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1097
Query: 963 ST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAY-FATGSSMTYHFQEHYTL 1020
+T C N G C ++ G TCDC ++Y GP C++ + Y F G ++ YT
Sbjct: 1098 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI-----TYTW 1152
Query: 1021 SENSSSLVSSLYRDVTLTR-EMITLSFRTTRSPSLLLYV--SSFYEEYLSVILANNGSLQ 1077
N D TR + + + F T + ++L+ V +S +YL + + + G++
Sbjct: 1153 PPN----------DRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVG 1201
Query: 1078 IRYKLDRHQNPDAFTFDFKN--MADGQLHQVKINREEAVVMVEVN 1120
+ + + D T D N ++DG+ H V+ R ++V+
Sbjct: 1202 VIFNV----GTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1242
Score = 73.9 bits (180), Expect = 9e-13
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 44/258 (17%)
Query: 788 DKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI----------- 836
D + + +F + +++ P + + T + F+TT +G+ + + G
Sbjct: 488 DVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGGGAGSHSS 547
Query: 837 ---TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVD 893
D+ +EL + D+G+G ++ S ND +W HV +R+ + S+ V+
Sbjct: 548 AQRADYFAMEL-LDGHLYLLLDMGSGGIKLRASS-RKVNDGEWCHVDFQRDGRKGSISVN 605
Query: 894 QLPQKMQPAPADGHVR-LQLNSQLFIGG----------------TATRQRGFLGCIRSLQ 936
+ P A G L L S+L++GG TA + G++GC+R L
Sbjct: 606 S---RSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLF 662
Query: 937 LNGVALDLEERATV--TPGVEPGCAGH----CSTYGHLCRNGGRCREKRRGVTCDCAFSA 990
++G + DL A GV P C+ C++ CRNGG CRE CDC +
Sbjct: 663 IDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAP--CRNGGVCREGWNRFICDCIGTG 720
Query: 991 YDGPFCSNEISAYFATGS 1008
+ G C E + GS
Sbjct: 721 FLGRVCEREATVLSYDGS 738
Score = 50.4 bits (119), Expect = 1e-05
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 864 TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG--- 920
T+Q TP D++WH V R+ + +L VD + +Q+ S LF+GG
Sbjct: 100 TLQLDTPVADDRWHMVLLTRDARRTALAVD--GEARAAEVRSKRREMQVASDLFVGGIPP 157
Query: 921 ----------TATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGH-----CSTY 965
T + F G + +L+L ER G + G G C+
Sbjct: 158 DVRLSALTLSTVKYEPPFRGLLANLKLG-------ERPPALLGSQ-GLRGATADPLCAPA 209
Query: 966 GHLCRNGGRCREKRRG-VTCDCAFSAYDGPFCSNE 999
+ C NGG C G V CDC+ + + G FCS E
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFCSEE 244
Score = 43.1 bits (100), Expect = 0.002
Identities = 86/387 (22%), Positives = 139/387 (35%), Gaps = 74/387 (19%)
Query: 808 AFHGELTADVCFFFKTTVSSGVFMENLG--ITDFIRIELRA-PTEVTFSFD---VGNGPC 861
A H E DV F + + G+ M D +R+EL ++T + D VG P
Sbjct: 748 AMHTE-AEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPS 806
Query: 862 E--VTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIG 919
+ T+ + NDN+WH VR R K L VD + + Q A A H+RL+ ++
Sbjct: 807 KGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMAGA--HMRLEFHN--IET 862
Query: 920 GTATRQR-------GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNG 972
G T +R F+G + L NG Y C++G
Sbjct: 863 GIMTERRFISVVPSNFIGHLSGLVFNG-----------------------QPYMDQCKDG 899
Query: 973 GRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLY 1032
D +C E++A F + + + T SS L +
Sbjct: 900 -------------------DITYC--ELNARFGLRAIVA----DPVTFKSRSSYLALATL 934
Query: 1033 RDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFT 1092
+ + F+TT LLL+ S +++ + L I Y D P
Sbjct: 935 Q--AYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG---YIHYVFDLGNGPSLMK 989
Query: 1093 FDF-KNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAG 1151
+ K + D Q H V ++R+ V S + + L +G + +
Sbjct: 990 GNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMF 1049
Query: 1152 ADPDTRRAATSGFTGCLSAVRFGRAAP 1178
++ A+ GF GCL++V P
Sbjct: 1050 SNLPKLVASRDGFQGCLASVDLNGRLP 1076
Score = 40.0 bits (92), Expect = 0.014
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 814 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPT-PFN 872
T ++ F+T +G+ + D++ + L++ V ++G+G E V+ FN
Sbjct: 311 TDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGA-VWLVINLGSGAFEALVEPVNGKFN 369
Query: 873 DNQWHHVRAERNVK 886
DN WH VR RN++
Sbjct: 370 DNAWHDVRVTRNLR 383
Score = 38.9 bits (89), Expect = 0.032
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 1042 ITLSFRTTRSPSLLLYVSSFYE-EYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMAD 1100
++ S RT + +LLLY+ + ++L ++L + G L++R+ L + P D +AD
Sbjct: 53 LSFSLRTNATRALLLYLDDGGDCDFLELLLVD-GRLRLRFTLSCAE-PATLQLDTP-VAD 109
Query: 1101 GQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAA 1160
+ H V + R+ + V+ A+ + S E L +G G PD R +A
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVG------GIPPDVRLSA 163
Query: 1161 TS--------GFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMAR-CAAG 1206
+ F G L+ ++ G P A L G T AP CA G
Sbjct: 164 LTLSTVKYEPPFRGLLANLKLGERPP--ALLGSQGLRGATADPLCAPARNPCANG 216
Score = 37.4 bits (85), Expect = 0.093
Identities = 51/237 (21%), Positives = 86/237 (36%), Gaps = 23/237 (9%)
Query: 386 NSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAG 445
+SGE ++F RT LL+ + L L DG+L+L + P +
Sbjct: 49 SSGE----LSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLD 104
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVL--IDSGDTYYFGGCLGNSSGSGC 503
+ D +WH V + + VD + + + + + GG + S
Sbjct: 105 TPVADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSAL 164
Query: 504 KSPL----GGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSY--CE 557
F+G L + +G++ +L QG G+ D C P+ C
Sbjct: 165 TLSTVKYEPPFRGLLANLKLGERP-PALLGSQGLRGATAD---------PLCAPARNPCA 214
Query: 558 HGGECSQ-SWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 613
+GG C+ + CDC TG+ G+ C + AH + G G+G
Sbjct: 215 NGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGGAG 271
Score = 32.3 bits (72), Expect = 3.0
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 241 LVFFLNSGNAKLPSTIA---PVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQA 297
L L G +L T++ P TL L + + D WH VL+ + VD +
Sbjct: 78 LELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRDARRTALAVDGEARAAEV 137
Query: 298 KGDSSNLDLNFEISFGGILSPGRSRAFTRKS------FHGCLENL 336
+ + + ++ GGI R A T + F G L NL
Sbjct: 138 RSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLANL 182
Score = 32.0 bits (71), Expect = 3.9
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPF-NDNQWHHVRAERNVKGASLQVD 893
G+ D++++ + T V F+VG ++T+ P +D ++H VR R+ A+LQVD
Sbjct: 1186 GLGDYLQLHIDQGT-VGVIFNVGTD--DITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1242
Query: 894 QLP-QKMQPAPADGHVRLQLNSQ 915
P + PA + RL + Q
Sbjct: 1243 SWPVNERYPAGNFDNERLAIARQ 1265
>gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens]
Length = 1061
Score = 117 bits (292), Expect = 9e-26
Identities = 109/418 (26%), Positives = 179/418 (42%), Gaps = 20/418 (4%)
Query: 177 CAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ ++ +DG + + DV S +F + ++ G+L+ + + + LE
Sbjct: 306 CEREASILSYDGSMYMKIIMPMVMHTEAEDV-SFRFMSQRAYGLLVATTSRDSADTLRLE 364
Query: 236 LIKGKLVFFLNSGNAKLP--STIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTH 293
L G++ +N ++ S+ P TL G L+D WH+V + + TVD
Sbjct: 365 LDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVA 424
Query: 294 HFQAKGDSSNLDL-NFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKP 352
GD + L+ N E GI++ R + SF G L++L +NG+ +L K
Sbjct: 425 EGTMVGDHTRLEFHNIET---GIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDI 481
Query: 353 QILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL 412
+ F PVTF + SYL+L + + FQF+T + G +LF
Sbjct: 482 DYCEL-KARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNSG 540
Query: 413 QRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVVVD 470
G+ + L G + +F G P + + LND QWH+V + S+ + +
Sbjct: 541 D-GNDFIAVELVKGYIHY-VFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKV 598
Query: 471 DDTAVQPLV--AVLID-SGDTYYFGGCLGNSSG-SGCKSPLGGFQGCLRLITIGDKAVDP 526
D V ++ A +D GD Y G G S + GFQGCL + + + D
Sbjct: 599 DTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDL 658
Query: 527 ILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q W+ F+CDC T Y+G C+
Sbjct: 659 I---NDALHRSGQIERGCEGPSTTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCN 713
Score = 110 bits (276), Expect = 7e-24
Identities = 99/345 (28%), Positives = 150/345 (43%), Gaps = 43/345 (12%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI-TDFIRIELRAPTEVTFSF 854
+F T++SYL + + F FKTT G + N G DFI +EL + + F
Sbjct: 501 TFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVEL-VKGYIHYVF 559
Query: 855 DVGNGPCEVTVQSPTPFNDNQWHHVRAER-NVKGASLQVDQLPQKMQPAPADGHVRLQLN 913
D+GNGP + S P NDNQWH+V R N SL+VD K+ +G L L
Sbjct: 560 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVD---TKVVTQVINGAKNLDLK 616
Query: 914 SQLFIGGTA-----------TRQRGFLGCIRSLQLNGVALDLEERATVTPG-VEPGCAGH 961
L++ G A + GF GC+ S+ LNG DL A G +E GC G
Sbjct: 617 GDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGP 676
Query: 962 CST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYF--ATGSSMTYHFQEHY 1018
+T C N G C ++ G TCDC+ ++Y G C++ + Y +G + Y + +
Sbjct: 677 STTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPAND 736
Query: 1019 TLSENSSSLV---SSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGS 1075
S S L S+ +D L R +P L ++ E+ ++ N G+
Sbjct: 737 RPSTRSDRLAVGFSTTVKDGILV--------RIDSAPGLGDFLQLHIEQGKIGVVFNIGT 788
Query: 1076 LQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVN 1120
+ I K +R + DG+ H V+ R ++V+
Sbjct: 789 VDISIKEER-----------TPVNDGKYHVVRFTRNGGNATLQVD 822
Score = 84.3 bits (207), Expect = 7e-16
Identities = 75/286 (26%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 328 SFHGCLENLYYNGVDV----TELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLA 382
+F GCL+ + Y D+ + LA+ ++ + G V F C T+ P+ F + +Y++
Sbjct: 27 NFMGCLKEVVYKNNDIRLELSRLARIADTKMKIYGEVVFKCENVATLDPINFETPEAYIS 86
Query: 383 LPGNSGEDKVSVTFQFRTWNRAGHLLF--GELQRGSGS----------FVLFLKDGKLKL 430
LP + + S++F FRT G +LF G+ Q + F + L DG L L
Sbjct: 87 LPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYL 146
Query: 431 SLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAV----LIDSG 486
L + + NDG+W+ V + V+ P A ++D
Sbjct: 147 LLDMGSGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRT--PFTASGESEILDLE 204
Query: 487 DTYYFGGCLGNSSGSGCKSPLG------GFQGCLRLITIG--DKAVDPILVQQGALGSFR 538
Y GG N +G + L G+ GC+R + I K + + Q A G
Sbjct: 205 GDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAG--- 261
Query: 539 DLQIDSCGITDRCLPSY-CEHGGECSQSWDTFSCDCLGTGYTGETC 583
++ ++ + SY C++ C W+ F CDC GTGY G TC
Sbjct: 262 -VKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTC 306
Score = 75.1 bits (183), Expect = 4e-13
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI--------------TDFIR 841
+F T +Y+ P ++ + + F F+TT +G+ + G DF
Sbjct: 77 NFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFA 136
Query: 842 IELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQP 901
+EL + D+G+G +V ND +W+HV +R+ + ++ V+ + P
Sbjct: 137 VEL-LDGNLYLLLDMGSGTIKVKATQKKA-NDGEWYHVDIQRDGRSGTISVNS---RRTP 191
Query: 902 APADGHVR-LQLNSQLFIGG---------------TATRQRGFLGCIRSLQLNGVALDLE 945
A G L L +++GG TA G++GCIR L ++G + ++
Sbjct: 192 FTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIR 251
Query: 946 ERATV--TPGVEPGC----AGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNE 999
+ A + GV+ C A C +Y C+N C++ CDC + Y G C E
Sbjct: 252 QLAEMQNAAGVKSSCSRMSAKQCDSYP--CKNNAVCKDGWNRFICDCTGTGYWGRTCERE 309
Query: 1000 ISAYFATGS 1008
S GS
Sbjct: 310 ASILSYDGS 318
Score = 52.4 bits (124), Expect = 3e-06
Identities = 71/340 (20%), Positives = 123/340 (36%), Gaps = 76/340 (22%)
Query: 208 ISLKFKAMQSNGILLHREGQHGNH-------------ITLELIKGKLVFFLN--SGNAKL 252
IS F+ + NG++L G+ +EL+ G L L+ SG K+
Sbjct: 98 ISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKV 157
Query: 253 PSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISF 312
+T +D W+ V I+ +V+ F A G+S LDL ++
Sbjct: 158 KATQKKA--------NDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYL 209
Query: 313 GG--------ILSPGRSRAFTRKSFHGCLENLYYNG--VDVTELAKKHKPQILMMGNVSF 362
GG IL A + GC+ +L+ +G ++ +LA+ +
Sbjct: 210 GGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRM 269
Query: 363 SCPQPQTVPV-----------TFLSSRSYLALPGNSGEDKVS------------------ 393
S Q + P F+ + G + E + S
Sbjct: 270 SAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVM 329
Query: 394 ------VTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSL--------FQAGQSP 439
V+F+F + G L+ + + + L L G++KL + + + P
Sbjct: 330 HTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGP 389
Query: 440 RNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLV 479
+ AG LND +WH+V + + + VDDD A +V
Sbjct: 390 ETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEGTMV 429
Score = 48.5 bits (114), Expect = 4e-05
Identities = 86/357 (24%), Positives = 128/357 (35%), Gaps = 84/357 (23%)
Query: 864 TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTAT 923
T+ + NDN+WH VR R K L VD + H RL+ ++ G T
Sbjct: 391 TLYAGQKLNDNEWHTVRVVRRGKSLKLTVDD--DVAEGTMVGDHTRLEFHN--IETGIMT 446
Query: 924 RQR-------GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCR 976
+R F+G ++SL NG+ Y LC+NG
Sbjct: 447 EKRYISVVPSSFIGHLQSLMFNGL-----------------------LYIDLCKNG---- 479
Query: 977 EKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVT 1036
D +C E+ A F + + + T SS L SL
Sbjct: 480 ---------------DIDYC--ELKARFGLRNIIA----DPVTFKTKSSYL--SLATLQA 516
Query: 1037 LTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDF- 1095
T + F+TT +L+ S ++++V L I Y D P+ +
Sbjct: 517 YTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKG---YIHYVFDLGNGPNVIKGNSD 573
Query: 1096 KNMADGQLHQVKINREEA-VVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAG--- 1151
+ + D Q H V I R+ + ++V+ QVI N K+L L L AG
Sbjct: 574 RPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVI-------NGAKNLDLKGDLYMAGLAQ 626
Query: 1152 ---ADPDTRRAATSGFTGCLSAVRFGRAAP--LKAALRPSGPSRVTVRGHVAPMARC 1203
++ A+ GF GCL++V P + AL SG RG P C
Sbjct: 627 GMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIE---RGCEGPSTTC 680
Score = 43.1 bits (100), Expect = 0.002
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 821 FKTTVSSGVFME---NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWH 877
F TTV G+ + G+ DF+++ + ++ F++G + + TP ND ++H
Sbjct: 749 FSTTVKDGILVRIDSAPGLGDFLQLHIEQG-KIGVVFNIGTVDISIK-EERTPVNDGKYH 806
Query: 878 HVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQL 937
VR RN A+LQVD P +Q+ IGG + R F G + L
Sbjct: 807 VVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGG-KDKGRLFQGQLSGLYY 865
Query: 938 NGV 940
+G+
Sbjct: 866 DGL 868
Score = 35.4 bits (80), Expect = 0.35
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 25/202 (12%)
Query: 185 YFDGQSA--LLYTLDKKPLKPIR-DVISLKFKAMQSNGILLHREGQHG--NHITLELIKG 239
Y G+S +LYT R D +++ F +GIL+ + G + + L + +G
Sbjct: 719 YIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQG 778
Query: 240 KL--VFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKH--THHF 295
K+ VF + + + + PV +D +H V VD H+
Sbjct: 779 KIGVVFNIGTVDISIKEERTPV--------NDGKYHVVRFTRNGGNATLQVDNWPVNEHY 830
Query: 296 QAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQIL 355
+ + +I+ GG GR F G L LYY+G+ V +A ++ P I
Sbjct: 831 PTGRQLTIFNTQAQIAIGG-KDKGRL-------FQGQLSGLYYDGLKVLNMAAENNPNIK 882
Query: 356 MMGNVSFSCPQPQTVPVTFLSS 377
+ G+V P + T +S
Sbjct: 883 INGSVRLVGEVPSILGTTQTTS 904
>gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Homo
sapiens]
Length = 387
Score = 90.1 bits (222), Expect = 1e-17
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 31 CDSPLA---SALPRSSFSSSSELSS------SHGPGFSRLNRRDGAGGWTPLVSNKYQWL 81
C +PL +++P ++SS + S P ++RL+++ W QWL
Sbjct: 230 CANPLGLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWL 289
Query: 82 QIDLGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYR--REESIWGFPGNTN 137
Q+DLG EVT + TQG +GS +V SY + +S+ NW +Y+ R S FPGN +
Sbjct: 290 QVDLGSSKEVTGIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWD 349
Query: 138 ADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
S + P AR++R LP+AW+ RI +R+E+ GC
Sbjct: 350 NHSHKKNLFETPILARYVRILPVAWH--NRIALRLELLGC 387
Score = 58.9 bits (141), Expect = 3e-08
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 17 TQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHG-PGFSRLNRRDGAGGWTPLVS 75
T+ P+G N +S +A++ R +F L H P +RLNR WTP +
Sbjct: 68 TKCVEPLGLENGNIANSQIAASSVRVTF-----LGLQHWVPELARLNRAGMVNAWTPSSN 122
Query: 76 NKYQWLQIDLGERMEVTAVATQGG--YGSSDWVTSYLLMFSDGGRNW-------KQYRRE 126
+ W+Q++L RM VT V TQG S +++ ++ + +S G + K+++
Sbjct: 123 DDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKE- 181
Query: 127 ESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
F GN N ++V + P EA+++R P + + +R E+ GC
Sbjct: 182 -----FVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHT--ACTLRFELLGC 225
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 85.9 bits (211), Expect = 2e-16
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 31 CDSPLA---SALPRSSFSSSSELSSSHG----PGFSRLNRRDGAGGWTPLVSNKYQWLQI 83
C +PL + ++SS S G P +RLN + W +N QWL+I
Sbjct: 2066 CSTPLGMENGKIENKQITASSFKKSWWGDYWEPFRARLNAQGRVNAWQAKANNNKQWLEI 2125
Query: 84 DLGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWG--FPGNTNAD 139
DL + ++TA+ TQG S +V SY + +S+ G WK YR + S+ F GNTN
Sbjct: 2126 DLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNTK 2185
Query: 140 SVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
V PP +RF+R +P WN I +R+E++GC
Sbjct: 2186 GHVKNFFNPPIISRFIRVIPKTWNQ--SIALRLELFGC 2221
Score = 60.8 bits (146), Expect = 8e-09
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 30 DCDSP--LASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWT--PLVSN--KYQWLQI 83
DC P L++ + S +SE P +RLN W+ L + W+Q+
Sbjct: 1906 DCRMPMGLSTGIISDSQIKASEFLGYWEPRLARLNNGGSYNAWSVEKLAAEFASKPWIQV 1965
Query: 84 DLGERMEVTAVATQGG--YGSSDWVTSYLLMFSDGGRNWKQYRREES--IWGFPGNTNAD 139
D+ + + +T + TQG Y S + T + + +S NW+ ++ + + F GN++A
Sbjct: 1966 DMQKEVIITGIQTQGAKHYLKSCYTTEFYVAYSSNQINWQIFKGNSTRNVMYFNGNSDAS 2025
Query: 140 SVVHYRLQPPFEARFLRFLPL-AWNPRGRIGMRIEVYGC 177
++ + PP AR++R P A+N R +R+E+ GC
Sbjct: 2026 TIKENQFDPPIVARYIRISPTRAYN---RPTLRLELQGC 2061
>gi|62420886 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 84.3 bits (207), Expect = 7e-16
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 8 VLKVLLLLPTQTWSPVGAGNPPDCDSPLASA---LPRSSFSSSSELSSSHGPGFSRLNRR 64
+L + LLLP + S NP C PL + +P ++SS+ S S + RL+
Sbjct: 8 LLVLFLLLPILS-SAKAQVNPAICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSE 66
Query: 65 DGAGGWTPLV----SNKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLLMFSDGG 117
+G G W P + + ++LQIDL +T V TQG + ++ Y + +S G
Sbjct: 67 EGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDG 126
Query: 118 RNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
W +R GN+N + L+PP ARF+RF+P+ + + MR+E+YGC
Sbjct: 127 TRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVT-DHSMNVCMRVELYGC 185
Query: 178 AYKSEVVYFDGQSALLYTL 196
+ +V ++ + + L
Sbjct: 186 VWLDGLVSYNAPAGQQFVL 204
>gi|62420884 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 84.3 bits (207), Expect = 7e-16
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 8 VLKVLLLLPTQTWSPVGAGNPPDCDSPLASA---LPRSSFSSSSELSSSHGPGFSRLNRR 64
+L + LLLP + S NP C PL + +P ++SS+ S S + RL+
Sbjct: 8 LLVLFLLLPILS-SAKAQVNPAICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSE 66
Query: 65 DGAGGWTPLV----SNKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLLMFSDGG 117
+G G W P + + ++LQIDL +T V TQG + ++ Y + +S G
Sbjct: 67 EGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDG 126
Query: 118 RNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
W +R GN+N + L+PP ARF+RF+P+ + + MR+E+YGC
Sbjct: 127 TRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVT-DHSMNVCMRVELYGC 185
Query: 178 AYKSEVVYFDGQSALLYTL 196
+ +V ++ + + L
Sbjct: 186 VWLDGLVSYNAPAGQQFVL 204
>gi|38327632 discoidin domain receptor family, member 1 isoform b
[Homo sapiens]
Length = 876
Score = 79.0 bits (193), Expect = 3e-14
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLAS---ALPRSSFSSSSELSSSHGPG 57
M A + L +LLL+ + G +P C L +P S S+SS S S
Sbjct: 1 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR 60
Query: 58 FSRLNRRDGAGGWTPLVS---NKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLL 111
SRL DG G W P S + ++LQ+DL V V TQG + ++ SY L
Sbjct: 61 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL 120
Query: 112 MFSDGGRNWKQYRREESIWG---FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRI 168
+S GR W ++ WG GN + + VV L PP AR +RF P A +
Sbjct: 121 RYSRDGRRWMGWKDR---WGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMS-V 176
Query: 169 GMRIEVYGCAYKSEVVYF 186
+R+E+YGC ++ ++ +
Sbjct: 177 CLRVELYGCLWRDGLLSY 194
>gi|83977452 discoidin domain receptor family, member 1 isoform c
[Homo sapiens]
Length = 919
Score = 79.0 bits (193), Expect = 3e-14
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLAS---ALPRSSFSSSSELSSSHGPG 57
M A + L +LLL+ + G +P C L +P S S+SS S S
Sbjct: 1 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR 60
Query: 58 FSRLNRRDGAGGWTPLVS---NKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLL 111
SRL DG G W P S + ++LQ+DL V V TQG + ++ SY L
Sbjct: 61 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL 120
Query: 112 MFSDGGRNWKQYRREESIWG---FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRI 168
+S GR W ++ WG GN + + VV L PP AR +RF P A +
Sbjct: 121 RYSRDGRRWMGWKDR---WGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMS-V 176
Query: 169 GMRIEVYGCAYKSEVVYF 186
+R+E+YGC ++ ++ +
Sbjct: 177 CLRVELYGCLWRDGLLSY 194
>gi|83977450 discoidin domain receptor family, member 1 isoform a
[Homo sapiens]
Length = 913
Score = 79.0 bits (193), Expect = 3e-14
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLAS---ALPRSSFSSSSELSSSHGPG 57
M A + L +LLL+ + G +P C L +P S S+SS S S
Sbjct: 1 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR 60
Query: 58 FSRLNRRDGAGGWTPLVS---NKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLL 111
SRL DG G W P S + ++LQ+DL V V TQG + ++ SY L
Sbjct: 61 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL 120
Query: 112 MFSDGGRNWKQYRREESIWG---FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRI 168
+S GR W ++ WG GN + + VV L PP AR +RF P A +
Sbjct: 121 RYSRDGRRWMGWKDR---WGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMS-V 176
Query: 169 GMRIEVYGCAYKSEVVYF 186
+R+E+YGC ++ ++ +
Sbjct: 177 CLRVELYGCLWRDGLLSY 194
>gi|33469931 EGF-like, fibronectin type III and laminin G domains
isoform 2 [Homo sapiens]
Length = 775
Score = 78.6 bits (192), Expect = 4e-14
Identities = 100/384 (26%), Positives = 154/384 (40%), Gaps = 50/384 (13%)
Query: 803 YLHFPAFHGELTADVCFFFKTTVSSGVFMENL--GITDFIRIELRAPTEVTFSFDVGNGP 860
YL F F E+T F+ GV + + G DF+ I L A V F FD G+G
Sbjct: 397 YLSFMEF--EIT------FRPDSGDGVLLYSYDTGSKDFLSINL-AGGHVEFRFDCGSGT 447
Query: 861 CEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADG-HVRLQLNSQLFIG 919
++S P WH +R R K LQVD+ QK+ A+G +++ N+ +FIG
Sbjct: 448 G--VLRSEDPLTLGNWHELRVSRTAKNGILQVDK--QKIVEGMAEGGFTQIKCNTDIFIG 503
Query: 920 GTATRQ---------RGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCR 970
G + F G I+ + LN + ++ T GV A H C
Sbjct: 504 GVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKH--DFTSGVNVENAAHPCVRAP-CA 560
Query: 971 NGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSS 1030
+GG CR ++ G CDC ++G C I + Y +N L
Sbjct: 561 HGGSCRPRKEGYDCDCPL-GFEGLHCQKAI----IEAIEIPQFIGRSYLTYDNPDIL--- 612
Query: 1031 LYRDVTLTREMITLSFRTTRSPSLLLYVSSF----YEEYLSVILANNGSLQIRYKLDRHQ 1086
+ V+ +R + + F+TT LLL+ +++S+ L +G+L Y L
Sbjct: 613 --KRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGL-RDGALVFSYNLGSGV 669
Query: 1087 NPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQ-SAKKQVILSSGTEFNAVKSLILGK 1145
F DG+ H+VK R+ + V+ A+ + N +L +G
Sbjct: 670 ASIMVNGSFN---DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGG 726
Query: 1146 VLEAAGADPDTRRAATSGFTGCLS 1169
+ E A T R G GC+S
Sbjct: 727 MKEIA---LHTNRQYMRGLVGCIS 747
Score = 49.3 bits (116), Expect = 2e-05
Identities = 95/433 (21%), Positives = 157/433 (36%), Gaps = 69/433 (15%)
Query: 208 ISLKFKAMQSNGILLH-REGQHG--NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLG 264
I+L+F+A +G+LL+ E +HG + ++L +I+ L F N G + ++ + LG
Sbjct: 177 ITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRRSLQFRFNCGTG-VAIIVSETKIKLG 235
Query: 265 SLLDDQHWHSVLIELLDTQVNFTVDKHTHHF-QAKGDSSNLDLNFEISFGGILSP-GRSR 322
WH+V++ ++ T Q++G S + + GG S R
Sbjct: 236 G------WHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVR 289
Query: 323 AF-TRKSFHGCLENLYYNG----------------VDVTELAKK--------HKPQILMM 357
A T + F GC+++L NG DV E + H +
Sbjct: 290 ATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSGICDEASCIHGGTCTAI 349
Query: 358 GNVSFSCPQPQ-------------TVPVTFLSSRSYLALPGNSGEDKVSVTFQ-----FR 399
S+ C P T+P S RSY A P E + ++F FR
Sbjct: 350 KADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYAATPWPL-EPQHYLSFMEFEITFR 408
Query: 400 TWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFS 459
+ G LL+ GS F+ G F G + + L G WH + S
Sbjct: 409 PDSGDGVLLYS-YDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELRVS 467
Query: 460 AKWSHMNVVVDDDTAVQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRL 516
+ + VD V+ + I + GG L F G ++
Sbjct: 468 RTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQK 527
Query: 517 ITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGT 576
I + D+ + V+ ++ C+ + C HGG C + + CDC
Sbjct: 528 IILNDRTIH---VKHDFTSG-----VNVENAAHPCVRAPCAHGGSCRPRKEGYDCDC-PL 578
Query: 577 GYTGETCHSSLYE 589
G+ G C ++ E
Sbjct: 579 GFEGLHCQKAIIE 591
Score = 37.4 bits (85), Expect = 0.093
Identities = 80/383 (20%), Positives = 135/383 (35%), Gaps = 63/383 (16%)
Query: 189 QSALLYTLDKKPLKPIRDV----ISLKFKAMQSNGILLHR-EGQHGNHITLELIKGKLVF 243
+S Y PL+P + + F+ +G+LL+ + + +++ L G + F
Sbjct: 380 ESLRSYAATPWPLEPQHYLSFMEFEITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEF 439
Query: 244 FLN--SGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTH-HFQAKGD 300
+ SG L S LTLG+ WH + + VDK A+G
Sbjct: 440 RFDCGSGTGVLRSEDP---LTLGN------WHELRVSRTAKNGILQVDKQKIVEGMAEGG 490
Query: 301 SSNLDLNFEISFGGI--LSPGRSRAFTRKSFHGCLENLYYN------------GVDVTEL 346
+ + N +I GG+ + + K F G ++ + N GV+V
Sbjct: 491 FTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENA 550
Query: 347 AKKHKPQILMMGNV------SFSCPQP-------------QTVPVTFLSSRSYLALPGNS 387
A G + C P + + + RSYL
Sbjct: 551 AHPCVRAPCAHGGSCRPRKEGYDCDCPLGFEGLHCQKAIIEAIEIPQFIGRSYLTYDNPD 610
Query: 388 GEDKVS-----VTFQFRTWNRAGHLLF---GELQRGSGSFVLFLKDGKLKLSLFQAGQSP 439
+VS V +F+T + G LL+ ++ S L L+DG L S + G
Sbjct: 611 ILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGV 669
Query: 440 RNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLG 496
++ NDG+WH V + VDD T P + ++ Y GG
Sbjct: 670 ASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 729
Query: 497 NSSGSGCKSPLGGFQGCLRLITI 519
+ + + + G GC+ T+
Sbjct: 730 IALHTN-RQYMRGLVGCISHFTL 751
Score = 36.2 bits (82), Expect = 0.21
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 852 FSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADG----- 906
F F+ G G + S T WH V R+ LQ++ P G
Sbjct: 215 FRFNCGTGVAIIV--SETKIKLGGWHTVMLYRDGLNGLLQLNN------GTPVTGQSQGQ 266
Query: 907 HVRLQLNSQLFIGGTATR---------QRGFLGCIRSLQLNGVALDLEE----RATVTPG 953
+ ++ + L++GG + RGF GC++SL +NG +D+ +A
Sbjct: 267 YSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGAD 326
Query: 954 VEPGCAGHCSTYGHLCRNGGRCRE-KRRGVTCDCAFSAYDGPFCSN 998
V +G C C +GG C K C C + G C +
Sbjct: 327 VGECSSGICDEAS--CIHGGTCTAIKADSYICLCPL-GFKGRHCED 369
>gi|33469929 EGF-like, fibronectin type III and laminin G domains
isoform 1 [Homo sapiens]
Length = 1009
Score = 78.6 bits (192), Expect = 4e-14
Identities = 100/384 (26%), Positives = 154/384 (40%), Gaps = 50/384 (13%)
Query: 803 YLHFPAFHGELTADVCFFFKTTVSSGVFMENL--GITDFIRIELRAPTEVTFSFDVGNGP 860
YL F F E+T F+ GV + + G DF+ I L A V F FD G+G
Sbjct: 631 YLSFMEF--EIT------FRPDSGDGVLLYSYDTGSKDFLSINL-AGGHVEFRFDCGSGT 681
Query: 861 CEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADG-HVRLQLNSQLFIG 919
++S P WH +R R K LQVD+ QK+ A+G +++ N+ +FIG
Sbjct: 682 G--VLRSEDPLTLGNWHELRVSRTAKNGILQVDK--QKIVEGMAEGGFTQIKCNTDIFIG 737
Query: 920 GTATRQ---------RGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCR 970
G + F G I+ + LN + ++ T GV A H C
Sbjct: 738 GVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKH--DFTSGVNVENAAHPCVRAP-CA 794
Query: 971 NGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSS 1030
+GG CR ++ G CDC ++G C I + Y +N L
Sbjct: 795 HGGSCRPRKEGYDCDCPL-GFEGLHCQKAI----IEAIEIPQFIGRSYLTYDNPDIL--- 846
Query: 1031 LYRDVTLTREMITLSFRTTRSPSLLLYVSSF----YEEYLSVILANNGSLQIRYKLDRHQ 1086
+ V+ +R + + F+TT LLL+ +++S+ L +G+L Y L
Sbjct: 847 --KRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGL-RDGALVFSYNLGSGV 903
Query: 1087 NPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQ-SAKKQVILSSGTEFNAVKSLILGK 1145
F DG+ H+VK R+ + V+ A+ + N +L +G
Sbjct: 904 ASIMVNGSFN---DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGG 960
Query: 1146 VLEAAGADPDTRRAATSGFTGCLS 1169
+ E A T R G GC+S
Sbjct: 961 MKEIA---LHTNRQYMRGLVGCIS 981
Score = 49.3 bits (116), Expect = 2e-05
Identities = 95/433 (21%), Positives = 157/433 (36%), Gaps = 69/433 (15%)
Query: 208 ISLKFKAMQSNGILLH-REGQHG--NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLG 264
I+L+F+A +G+LL+ E +HG + ++L +I+ L F N G + ++ + LG
Sbjct: 411 ITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRRSLQFRFNCGTG-VAIIVSETKIKLG 469
Query: 265 SLLDDQHWHSVLIELLDTQVNFTVDKHTHHF-QAKGDSSNLDLNFEISFGGILSP-GRSR 322
WH+V++ ++ T Q++G S + + GG S R
Sbjct: 470 G------WHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVR 523
Query: 323 AF-TRKSFHGCLENLYYNG----------------VDVTELAKK--------HKPQILMM 357
A T + F GC+++L NG DV E + H +
Sbjct: 524 ATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSGICDEASCIHGGTCTAI 583
Query: 358 GNVSFSCPQPQ-------------TVPVTFLSSRSYLALPGNSGEDKVSVTFQ-----FR 399
S+ C P T+P S RSY A P E + ++F FR
Sbjct: 584 KADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYAATPWPL-EPQHYLSFMEFEITFR 642
Query: 400 TWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFS 459
+ G LL+ GS F+ G F G + + L G WH + S
Sbjct: 643 PDSGDGVLLYS-YDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELRVS 701
Query: 460 AKWSHMNVVVDDDTAVQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRL 516
+ + VD V+ + I + GG L F G ++
Sbjct: 702 RTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQK 761
Query: 517 ITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGT 576
I + D+ + V+ ++ C+ + C HGG C + + CDC
Sbjct: 762 IILNDRTIH---VKHDFTSG-----VNVENAAHPCVRAPCAHGGSCRPRKEGYDCDC-PL 812
Query: 577 GYTGETCHSSLYE 589
G+ G C ++ E
Sbjct: 813 GFEGLHCQKAIIE 825
Score = 37.4 bits (85), Expect = 0.093
Identities = 80/383 (20%), Positives = 135/383 (35%), Gaps = 63/383 (16%)
Query: 189 QSALLYTLDKKPLKPIRDV----ISLKFKAMQSNGILLHR-EGQHGNHITLELIKGKLVF 243
+S Y PL+P + + F+ +G+LL+ + + +++ L G + F
Sbjct: 614 ESLRSYAATPWPLEPQHYLSFMEFEITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEF 673
Query: 244 FLN--SGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTH-HFQAKGD 300
+ SG L S LTLG+ WH + + VDK A+G
Sbjct: 674 RFDCGSGTGVLRSEDP---LTLGN------WHELRVSRTAKNGILQVDKQKIVEGMAEGG 724
Query: 301 SSNLDLNFEISFGGI--LSPGRSRAFTRKSFHGCLENLYYN------------GVDVTEL 346
+ + N +I GG+ + + K F G ++ + N GV+V
Sbjct: 725 FTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENA 784
Query: 347 AKKHKPQILMMGNV------SFSCPQP-------------QTVPVTFLSSRSYLALPGNS 387
A G + C P + + + RSYL
Sbjct: 785 AHPCVRAPCAHGGSCRPRKEGYDCDCPLGFEGLHCQKAIIEAIEIPQFIGRSYLTYDNPD 844
Query: 388 GEDKVS-----VTFQFRTWNRAGHLLF---GELQRGSGSFVLFLKDGKLKLSLFQAGQSP 439
+VS V +F+T + G LL+ ++ S L L+DG L S + G
Sbjct: 845 ILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGV 903
Query: 440 RNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLG 496
++ NDG+WH V + VDD T P + ++ Y GG
Sbjct: 904 ASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 963
Query: 497 NSSGSGCKSPLGGFQGCLRLITI 519
+ + + + G GC+ T+
Sbjct: 964 IALHTN-RQYMRGLVGCISHFTL 985
Score = 36.2 bits (82), Expect = 0.21
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 852 FSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADG----- 906
F F+ G G + S T WH V R+ LQ++ P G
Sbjct: 449 FRFNCGTGVAIIV--SETKIKLGGWHTVMLYRDGLNGLLQLNN------GTPVTGQSQGQ 500
Query: 907 HVRLQLNSQLFIGGTATR---------QRGFLGCIRSLQLNGVALDLEE----RATVTPG 953
+ ++ + L++GG + RGF GC++SL +NG +D+ +A
Sbjct: 501 YSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGAD 560
Query: 954 VEPGCAGHCSTYGHLCRNGGRCRE-KRRGVTCDCAFSAYDGPFCSN 998
V +G C C +GG C K C C + G C +
Sbjct: 561 VGECSSGICDEAS--CIHGGTCTAIKADSYICLCPL-GFKGRHCED 603
>gi|33469935 EGF-like, fibronectin type III and laminin G domains
isoform 3 [Homo sapiens]
Length = 375
Score = 78.2 bits (191), Expect = 5e-14
Identities = 91/356 (25%), Positives = 144/356 (40%), Gaps = 40/356 (11%)
Query: 829 VFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGA 888
++ + G DF+ I L A V F FD G+G ++S P WH +R R K
Sbjct: 17 LYSYDTGSKDFLSINL-AGGHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNG 73
Query: 889 SLQVDQLPQKMQPAPADG-HVRLQLNSQLFIGGTATRQ---------RGFLGCIRSLQLN 938
LQVD+ QK+ A+G +++ N+ +FIGG + F G I+ + LN
Sbjct: 74 ILQVDK--QKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILN 131
Query: 939 GVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSN 998
+ ++ T GV A H C +GG CR ++ G CDC ++G C
Sbjct: 132 DRTIHVKH--DFTSGVNVENAAHPCVRAP-CAHGGSCRPRKEGYDCDCPL-GFEGLHCQK 187
Query: 999 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV 1058
I + Y +N L + V+ +R + + F+TT LLL+
Sbjct: 188 AI----IEAIEIPQFIGRSYLTYDNPDIL-----KRVSGSRSNVFMRFKTTAKDGLLLWR 238
Query: 1059 SSF----YEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAV 1114
+++S+ L +G+L Y L F DG+ H+VK R+
Sbjct: 239 GDSPMRPNSDFISLGL-RDGALVFSYNLGSGVASIMVNGSFN---DGRWHRVKAVRDGQS 294
Query: 1115 VMVEVNQ-SAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLS 1169
+ V+ A+ + N +L +G + E A T R G GC+S
Sbjct: 295 GKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIA---LHTNRQYMRGLVGCIS 347
Score = 37.0 bits (84), Expect = 0.12
Identities = 75/358 (20%), Positives = 127/358 (35%), Gaps = 59/358 (16%)
Query: 210 LKFKAMQSNGILLHR-EGQHGNHITLELIKGKLVFFLN--SGNAKLPSTIAPVTLTLGSL 266
+ F+ +G+LL+ + + +++ L G + F + SG L S LTLG+
Sbjct: 5 ITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDP---LTLGN- 60
Query: 267 LDDQHWHSVLIELLDTQVNFTVDKHTH-HFQAKGDSSNLDLNFEISFGGI--LSPGRSRA 323
WH + + VDK A+G + + N +I GG+ + +
Sbjct: 61 -----WHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNS 115
Query: 324 FTRKSFHGCLENLYYN------------GVDVTELAKKHKPQILMMGNV------SFSCP 365
K F G ++ + N GV+V A G + C
Sbjct: 116 GVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVRAPCAHGGSCRPRKEGYDCD 175
Query: 366 QP-------------QTVPVTFLSSRSYLALPGNSGEDKVS-----VTFQFRTWNRAGHL 407
P + + + RSYL +VS V +F+T + G L
Sbjct: 176 CPLGFEGLHCQKAIIEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLL 235
Query: 408 LF---GELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSH 464
L+ ++ S L L+DG L S + G ++ NDG+WH V
Sbjct: 236 LWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRWHRVKAVRDGQS 294
Query: 465 MNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITI 519
+ VDD T P + ++ Y GG + + + + G GC+ T+
Sbjct: 295 GKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGLVGCISHFTL 351
Score = 35.0 bits (79), Expect = 0.46
Identities = 41/195 (21%), Positives = 67/195 (34%), Gaps = 13/195 (6%)
Query: 398 FRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVS 457
FR + G LL+ GS F+ G F G + + L G WH +
Sbjct: 7 FRPDSGDGVLLYS-YDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELR 65
Query: 458 FSAKWSHMNVVVDDDTAVQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCL 514
S + + VD V+ + I + GG L F G +
Sbjct: 66 VSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSI 125
Query: 515 RLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCL 574
+ I + D+ + V+ ++ C+ + C HGG C + + CDC
Sbjct: 126 QKIILNDRTIH---VKHDFTSG-----VNVENAAHPCVRAPCAHGGSCRPRKEGYDCDC- 176
Query: 575 GTGYTGETCHSSLYE 589
G+ G C ++ E
Sbjct: 177 PLGFEGLHCQKAIIE 191
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 77.8 bits (190), Expect = 6e-14
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 364 CPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFL 423
C + PV RS+LA P + + +FR G LL+ RG L L
Sbjct: 1366 CEKVLGAPVPAFEGRSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALAL 1425
Query: 424 KDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAV---QPLVA 480
DG+++L F G P +T+ + GQWH + S W + VD +T V P
Sbjct: 1426 LDGRVQLR-FDTGSGPAVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGT 1484
Query: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPL--GGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
++ + GG + + + G +GC+RL+ + ++ ++ + G + R
Sbjct: 1485 DGLNLDTDLFVGGVPEDQAAVALERTFVGAGLRGCIRLLDVNNQRLE---LGIGPGAATR 1541
Query: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDT--FSCDCLGTGYTGETC 583
+ CG CLP+ C HGG Q+ + F C C G G TC
Sbjct: 1542 GSGVGECG-DHPCLPNPC-HGGAPCQNLEAGRFHCQC-PPGRVGPTC 1585
Score = 71.6 bits (174), Expect = 4e-12
Identities = 96/354 (27%), Positives = 138/354 (38%), Gaps = 28/354 (7%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQ 894
G DF+ + LR + F +D+G G ++S P W V ERN + +L+V
Sbjct: 1686 GKGDFVSLALR-DRRLEFRYDLGKGAA--VIRSREPVTLGAWTRVSLERNGRKGALRVGD 1742
Query: 895 LPQKMQPAPADGHVRLQLNSQLFIGGT---------ATRQRGFLGCIRSLQLNGVALDLE 945
P+ + +P H L L L++GG A GF G I+ + L G L
Sbjct: 1743 GPRVLGESPVP-HTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTP 1801
Query: 946 ERATVTPGVEPGCAGHCSTY--GHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAY 1003
E V AGH T GH C NG C + C C + GP C +
Sbjct: 1802 EHVLRQVDVT-SFAGHPCTRASGHPCLNGASCVPREAAYVCLCP-GGFSGPHCEKGLVEK 1859
Query: 1004 FATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYE 1063
A G T F + T E +++ S + L LS RT + L+L+ E
Sbjct: 1860 SA-GDVDTLAF-DGRTFVEYLNAVTES---EKALQSNHFELSLRTEATQGLVLWSGKATE 1914
Query: 1064 EYLSVILA-NNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQS 1122
V LA +G LQ+ Y L T + +V +RE+ ++V
Sbjct: 1915 RADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNT---NRWLRVVAHREQREGSLQVGNE 1971
Query: 1123 AKKQVILSSG-TEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGR 1175
A G T+ + +L LG + E P +A +GF GCL V GR
Sbjct: 1972 APVTGSSPLGATQLDTDGALWLGGLPELP-VGPALPKAYGTGFVGCLRDVVVGR 2024
Score = 43.9 bits (102), Expect = 0.001
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 15/209 (7%)
Query: 390 DKVSVTFQFRTWNRAGHLLF-GELQRGSGSFV-LFLKDGKLKLSLFQAGQSPRNVTAGAG 447
+K+++ F +G LL+ G+ G G FV L L+D +L+ + G+ + +
Sbjct: 1660 EKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRDRRLEFR-YDLGKGAAVIRSREP 1718
Query: 448 LNDGQWHSVSFSAKWSHMNVVVDDDTAV---QPLVAVLIDSGDTYYFGGCLGNSSGSGCK 504
+ G W VS + V D V P+ +++ + Y GG S +
Sbjct: 1719 VTLGAWTRVSLERNGRKGALRVGDGPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAA 1778
Query: 505 SPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCG--ITDRCLPSYCEHGGEC 562
+ GF G ++L+++G + +L + L R + + S R C +G C
Sbjct: 1779 AVSSGFDGAIQLVSLGGR---QLLTPEHVL---RQVDVTSFAGHPCTRASGHPCLNGASC 1832
Query: 563 SQSWDTFSCDCLGTGYTGETCHSSLYEQS 591
+ C C G G++G C L E+S
Sbjct: 1833 VPREAAYVCLCPG-GFSGPHCEKGLVEKS 1860
Score = 43.9 bits (102), Expect = 0.001
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 853 SFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQL 912
S+++G+ P V ++S P N N+W V A R + SLQV +P G +L
Sbjct: 1931 SYNLGSQP--VVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPL-GATQLDT 1987
Query: 913 NSQLFIGG----------TATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEP 956
+ L++GG GF+GC+R + + L L E A P + P
Sbjct: 1988 DGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRP 2041
Score = 37.0 bits (84), Expect = 0.12
Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 208 ISLKFKAMQSNGILLHREGQHG-NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSL 266
++L+F+A++ G+LL+ G + + L L+ G++ ++G+ P LT
Sbjct: 1396 LALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGS-------GPAVLTSAVP 1448
Query: 267 LDDQHWHSVLIELLDTQVNFTVDKHTHHF-QAKGDSSNLDLNFEISFGGI----LSPGRS 321
++ WH + + + +VD T ++ + L+L+ ++ GG+ +
Sbjct: 1449 VEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVALE 1508
Query: 322 RAFTRKSFHGCLENLYYN 339
R F GC+ L N
Sbjct: 1509 RTFVGAGLRGCIRLLDVN 1526
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 77.8 bits (190), Expect = 6e-14
Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 46 SSSELSSSHGPGFSRLNRRDGA-------GGWTPLVSNKYQWLQIDLGERMEVTAVATQG 98
+SS L G RLN + GA G W + QW+++D T V TQG
Sbjct: 402 ASSMLRHGLGAQRGRLNMQTGATEDDYYDGAWCAEDDARTQWIEVDTRRTTRFTGVITQG 461
Query: 99 GYGS--SDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLR 156
S D+VT++ + FS+ + W Y F GN + D+ V L P ARF+R
Sbjct: 462 RDSSIHDDFVTTFFVGFSNDSQTWVMYTNGYEEMTFHGNVDKDTPVLSELPEPVVARFIR 521
Query: 157 FLPLAWNPRGRIGMRIEVYGCAYKSEVVYF 186
PL WN G + MR+EV GC+ Y+
Sbjct: 522 IYPLTWN--GSLCMRLEVLGCSVAPVYSYY 549
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,627,257
Number of Sequences: 37866
Number of extensions: 2580188
Number of successful extensions: 8666
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 7362
Number of HSP's gapped (non-prelim): 1015
length of query: 1288
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1174
effective length of database: 13,930,794
effective search space: 16354752156
effective search space used: 16354752156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.