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Search of human proteins with 239743236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo
sapiens]
(140 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo ... 293 3e-80
gi|239508911 PREDICTED: hypothetical protein [Homo sapiens] 293 3e-80
gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo ... 260 3e-70
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens] 259 7e-70
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 32 0.17
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 32 0.17
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 32 0.17
gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1 [Hom... 31 0.38
gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo ... 30 0.49
gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo ... 30 0.49
gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo ... 30 0.49
gi|239742274 PREDICTED: hypothetical protein XP_002342470 [Homo ... 29 1.4
gi|157743267 ankyrin repeat domain 58 [Homo sapiens] 29 1.4
gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Hom... 28 1.9
gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Hom... 28 1.9
gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo sap... 28 1.9
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 28 2.5
gi|113423529 PREDICTED: hypothetical protein [Homo sapiens] 28 3.2
gi|20270303 ras homolog gene family, member T2 [Homo sapiens] 28 3.2
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 27 4.2
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 27 4.2
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 27 4.2
gi|169208948 PREDICTED: similar to COMM domain containing 4 [Hom... 27 5.5
gi|239756063 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|169164003 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|113413791 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|169216272 PREDICTED: hypothetical protein [Homo sapiens] 27 7.1
gi|169216572 PREDICTED: hypothetical protein [Homo sapiens] 27 7.1
gi|89040494 PREDICTED: hypothetical protein [Homo sapiens] 27 7.1
gi|239755899 PREDICTED: hypothetical protein [Homo sapiens] 26 9.3
>gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo
sapiens]
Length = 140
Score = 293 bits (750), Expect = 3e-80
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPTPSPSSGGSCRGEGPD 140
SALPTPSPSSGGSCRGEGPD
Sbjct: 121 SALPTPSPSSGGSCRGEGPD 140
>gi|239508911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 293 bits (750), Expect = 3e-80
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPTPSPSSGGSCRGEGPD 140
SALPTPSPSSGGSCRGEGPD
Sbjct: 121 SALPTPSPSSGGSCRGEGPD 140
>gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo
sapiens]
Length = 399
Score = 260 bits (664), Expect = 3e-70
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPT 125
SALPT
Sbjct: 121 SALPT 125
>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 551
Score = 259 bits (661), Expect = 7e-70
Identities = 124/125 (99%), Positives = 125/125 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVP+LLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPNLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPT 125
SALPT
Sbjct: 121 SALPT 125
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 32.0 bits (71), Expect = 0.17
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 RTQEGAGVQGARAAVPS--LLTCRRLCPERWVMAEEAGGTSGPRVPLLK 70
R G G+ A AA P+ LTC+ E A AG SGPRVP ++
Sbjct: 111 RASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR 159
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 32.0 bits (71), Expect = 0.17
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 RTQEGAGVQGARAAVPS--LLTCRRLCPERWVMAEEAGGTSGPRVPLLK 70
R G G+ A AA P+ LTC+ E A AG SGPRVP ++
Sbjct: 129 RASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR 177
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 32.0 bits (71), Expect = 0.17
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 RTQEGAGVQGARAAVPS--LLTCRRLCPERWVMAEEAGGTSGPRVPLLK 70
R G G+ A AA P+ LTC+ E A AG SGPRVP ++
Sbjct: 129 RASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR 177
>gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1 [Homo
sapiens]
Length = 290
Score = 30.8 bits (68), Expect = 0.38
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 73 STTGLKLGGSGKFEGMGGCGRRELVKKSEM--SMKSSRLGCSGVRSGWIMSALPTPS 127
S G ++GG G G+GG R+ L+ S + R+ C R W SA TPS
Sbjct: 205 SRRGKRVGGEGTGFGVGGALRQGLMVTGACGHSRRGMRMTCPLCRRLWARSASTTPS 261
>gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 30.4 bits (67), Expect = 0.49
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 12 EPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRL-CPERWVMAEEAGGTSGPRV-PLL 69
EPG R+++ GV G AA P +C L P ++ E G + P + PLL
Sbjct: 480 EPGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLL 539
Query: 70 KRESTTGLKLGGSGKFEGMGGCGRR 94
+ LGGS +G GC +R
Sbjct: 540 VHQ------LGGSSSQQGEDGCPQR 558
>gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 30.4 bits (67), Expect = 0.49
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 12 EPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRL-CPERWVMAEEAGGTSGPRV-PLL 69
EPG R+++ GV G AA P +C L P ++ E G + P + PLL
Sbjct: 480 EPGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLL 539
Query: 70 KRESTTGLKLGGSGKFEGMGGCGRR 94
+ LGGS +G GC +R
Sbjct: 540 VHQ------LGGSSSQQGEDGCPQR 558
>gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 30.4 bits (67), Expect = 0.49
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 12 EPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRL-CPERWVMAEEAGGTSGPRV-PLL 69
EPG R+++ GV G AA P +C L P ++ E G + P + PLL
Sbjct: 480 EPGEKHRRQDQQPLCRPPGVHGHHAATPRSCSCAWLPAPSLNFISFETGHSLCPELLPLL 539
Query: 70 KRESTTGLKLGGSGKFEGMGGCGRR 94
+ LGGS +G GC +R
Sbjct: 540 VHQ------LGGSSSQQGEDGCPQR 558
>gi|239742274 PREDICTED: hypothetical protein XP_002342470 [Homo
sapiens]
Length = 87
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 80 GGSGKFEG----MGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIMSALPTP 126
GG G EG + G RR++ K E + + R R+ WI+ +PTP
Sbjct: 22 GGLGPAEGHCLNLSGVCRRDVCKVVEDQIGACRRKMKCCRAWWILMPIPTP 72
>gi|157743267 ankyrin repeat domain 58 [Homo sapiens]
Length = 315
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 29 AGVQGARAAVPSLLTCRRLCPERWV---MAEEAGGTSGP 64
AG R A+ LL +R P W+ AEE GG SGP
Sbjct: 65 AGSGRRRGALRELLGLQRAAPAGWLSEERAEELGGPSGP 103
>gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Homo
sapiens]
Length = 697
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 4 RWGYRRGWEPGLGVFRKEEIRTQEGAGVQ-GARAAVPSLLTCRRLCPERWVMAEEAGGTS 62
RW ++ W+ L + ++++ QE ++ G A P E +A++ G +
Sbjct: 610 RWAWQTWWQRILRLRVAQQLQQQEDGPLRSGTNAWQPGAQG------EELPVAQDPGASQ 663
Query: 63 GPRVPLLKRESTTGLKLGGSGKFEG 87
PR P + R+ +GG G+ G
Sbjct: 664 APRAPRVDRKPPEHRGVGGLGQSMG 688
>gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Homo
sapiens]
Length = 697
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 4 RWGYRRGWEPGLGVFRKEEIRTQEGAGVQ-GARAAVPSLLTCRRLCPERWVMAEEAGGTS 62
RW ++ W+ L + ++++ QE ++ G A P E +A++ G +
Sbjct: 610 RWAWQTWWQRILRLRVAQQLQQQEDGPLRSGTNAWQPGAQG------EELPVAQDPGASQ 663
Query: 63 GPRVPLLKRESTTGLKLGGSGKFEG 87
PR P + R+ +GG G+ G
Sbjct: 664 APRAPRVDRKPPEHRGVGGLGQSMG 688
>gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo
sapiens]
Length = 697
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 4 RWGYRRGWEPGLGVFRKEEIRTQEGAGVQ-GARAAVPSLLTCRRLCPERWVMAEEAGGTS 62
RW ++ W+ L + ++++ QE ++ G A P E +A++ G +
Sbjct: 610 RWAWQTWWQRILRLRVAQQLQQQEDGPLRSGTNAWQPGAQG------EELPVAQDPGASQ 663
Query: 63 GPRVPLLKRESTTGLKLGGSGKFEG 87
PR P + R+ +GG G+ G
Sbjct: 664 APRAPRVDRKPPEHRGVGGLGQSMG 688
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 28.1 bits (61), Expect = 2.5
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 9 RGWEPGLGVFRKEEIRTQEGAGV-QGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
RG PG G+F + QE + +GA AA + RL V AG S
Sbjct: 554 RGRAPGRGLFHVALLMRQEAGQLREGAVAAAAA----ERLPAGSPVAVLVAGEPS----- 604
Query: 68 LLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLG 110
GL G +GK GG GRR L ++ + RLG
Sbjct: 605 ----HRPEGLAAGQTGKARRGGGGGRRGLRQRGRWLVGLGRLG 643
>gi|113423529 PREDICTED: hypothetical protein [Homo sapiens]
Length = 276
Score = 27.7 bits (60), Expect = 3.2
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 19/80 (23%)
Query: 59 GGTSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGW 118
GG G + L G + GG G+ E GG GR+ SR G + R
Sbjct: 33 GGQDGGEIIFLH----LGGRRGGEGRREAGGGGGRK------------SREGAACARR-- 74
Query: 119 IMSALPTPSPSSGGSCRGEG 138
+ P+P+P G GEG
Sbjct: 75 -LIRCPSPAPPGGAGGLGEG 93
>gi|20270303 ras homolog gene family, member T2 [Homo sapiens]
Length = 618
Score = 27.7 bits (60), Expect = 3.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 51 RWVMAEEAGGTSGPRVPLLKRESTTGLKLGGS 82
+W+ G T GPRVP++ + + L+ G S
Sbjct: 96 KWIPLVNGGTTQGPRVPIILVGNKSDLRSGSS 127
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 27.3 bits (59), Expect = 4.2
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 94 RELVKKSEMSMKSSRLGCS-----GVRSGWIMSALPTPSPSSGGSCRGEGP 139
R K+E +SSRL G+ S W + A P P P G GP
Sbjct: 44 RRFSGKAEPRPRSSRLSRRSSVDLGLLSSWSLPASPAPDPPDPPDSAGPGP 94
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 27.3 bits (59), Expect = 4.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 116 SGWIMSALPTPSPSSGGSCRGEGPD 140
S W+ L +P PS GG+ RG G +
Sbjct: 682 SRWLDDLLASPPPSGGGARRGAGAE 706
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 27.3 bits (59), Expect = 4.2
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 49 PERWVMAEEAGGTSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSR 108
P+ + + G+S P P S++ GG G G GG G R S SS
Sbjct: 24 PKYSALHSTSPGSSAPIAPSASSPSSSSNAGGGGGGGGGGGGGGGR--------SSSSSS 75
Query: 109 LGCSGVRSGWIM--SALPTP 126
G SG M + LPTP
Sbjct: 76 SGSSGGGGSEAMRRACLPTP 95
>gi|169208948 PREDICTED: similar to COMM domain containing 4 [Homo
sapiens]
Length = 437
Score = 26.9 bits (58), Expect = 5.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 87 GMGGCGRRELVKKSEM--SMKSSRLGCSGVRSGWIMSALPTPSPSSGG 132
G G GR+ L K+ E+ + +S+ C+GVR+ ++ P PS S G
Sbjct: 14 GAGMRGRQWLRKRVEVVCTGRSANTVCAGVRAAGLVEKSPPPSLSRMG 61
>gi|239756063 PREDICTED: hypothetical protein [Homo sapiens]
Length = 358
Score = 26.9 bits (58), Expect = 5.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 49 PERWVMAEEAGGTSGPRVPLLKRESTTGLKLGGSGKFEGMGGCG 92
P R+ + P VPL ST GL G+G+ EG+GG G
Sbjct: 49 PVRFSCSPMLASRQVPLVPLTLYLSTEGLL--GTGEGEGLGGAG 90
>gi|169164003 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 26.9 bits (58), Expect = 5.5
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 8 RRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
RR W+ LG + + G + A P+ ++ RR C ER + G R P
Sbjct: 91 RRNWDLCLGQDVNRNPQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAP 150
Query: 68 L 68
L
Sbjct: 151 L 151
>gi|113413791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 26.9 bits (58), Expect = 5.5
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 8 RRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
RR W+ LG + + G + A P+ ++ RR C ER + G R P
Sbjct: 91 RRNWDLCLGQDVNRNPQARPGHLLPSLEALTPTRVSWRRQCQERLDWDGDGEGCLARRAP 150
Query: 68 L 68
L
Sbjct: 151 L 151
>gi|169216272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 26.6 bits (57), Expect = 7.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 100 SEMSMKSSRLGCS---GVRSGWIMSALPTPSPSSG 131
SE+ S LG S + W +S L TPSPS G
Sbjct: 122 SEIPSTSQGLGASETPNTNTYWDLSTLETPSPSQG 156
>gi|169216572 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 26.6 bits (57), Expect = 7.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 100 SEMSMKSSRLGCS---GVRSGWIMSALPTPSPSSG 131
SE+ S LG S + W +S L TPSPS G
Sbjct: 122 SEIPSTSQGLGASETPNTNTYWDLSTLETPSPSQG 156
>gi|89040494 PREDICTED: hypothetical protein [Homo sapiens]
Length = 187
Score = 26.6 bits (57), Expect = 7.1
Identities = 33/114 (28%), Positives = 43/114 (37%), Gaps = 23/114 (20%)
Query: 30 GVQGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVPLLKRESTTGLKLGGSGKFEGMG 89
G+ G+R A P C + A GPR T G+ G+G E +
Sbjct: 74 GLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPR--------TGGVSARGTGTSEMIA 125
Query: 90 G---CGRRELVKKSEMSMKSSRLGCSGV-RSGWIMSALPTPSPSSGGSCRGEGP 139
G CG R S R C G+ +S W+ P+P PSS G R P
Sbjct: 126 GPVECGERG-------SSFFPRGPCQGLLQSQWV----PSPKPSSPGGKRFSSP 168
>gi|239755899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 459
Score = 26.2 bits (56), Expect = 9.3
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 72 ESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSR---LGCSGVRSGWIMSALPTP 126
E T G + G S + G C RRE + S +S+ R LGC G ALP P
Sbjct: 120 EDTRGWR-GRSRELLSTGSCRRREQTRPSPLSISKPRRADLGCWGSAP----RALPCP 172
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,612,002
Number of Sequences: 37866
Number of extensions: 307585
Number of successful extensions: 1001
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 991
Number of HSP's gapped (non-prelim): 36
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.