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Search of human proteins with 239742810
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6
[Homo sapiens]
(391 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 815 0.0
gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 815 0.0
gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 815 0.0
gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching e... 298 4e-81
gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching en... 292 4e-79
gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching e... 291 5e-79
gi|190684701 glucosaminyl (N-acetyl) transferase family member 7... 213 2e-55
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho... 193 3e-49
gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho... 183 2e-46
gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 175 7e-44
gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 175 7e-44
gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 175 7e-44
gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 175 7e-44
gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6... 175 7e-44
gi|110611246 xylosyltransferase II [Homo sapiens] 57 4e-08
gi|28269693 xylosyltransferase I [Homo sapiens] 55 1e-07
gi|31982895 THAP domain containing 4 [Homo sapiens] 32 0.98
gi|93204865 hypothetical protein LOC57724 [Homo sapiens] 30 4.9
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 29 8.3
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 29 8.3
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 29 8.3
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 29 8.3
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 29 8.3
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 29 8.3
gi|13375642 kringle-containing transmembrane protein 2 isoform b... 29 8.3
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 29 8.3
gi|27437008 kringle-containing transmembrane protein 2 isoform d... 29 8.3
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 29 8.3
>gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 815 bits (2104), Expect = 0.0
Identities = 391/391 (100%), Positives = 391/391 (100%)
Query: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV
Sbjct: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
Query: 61 QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY
Sbjct: 61 QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
Query: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI
Sbjct: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
Query: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT
Sbjct: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
Query: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK
Sbjct: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
Query: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA
Sbjct: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
Query: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
PREALGPFHLKAACSAHQNKWGFWNCYLHLK
Sbjct: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
>gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 815 bits (2104), Expect = 0.0
Identities = 391/391 (100%), Positives = 391/391 (100%)
Query: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV
Sbjct: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
Query: 61 QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY
Sbjct: 61 QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
Query: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI
Sbjct: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
Query: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT
Sbjct: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
Query: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK
Sbjct: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
Query: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA
Sbjct: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
Query: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
PREALGPFHLKAACSAHQNKWGFWNCYLHLK
Sbjct: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
>gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 815 bits (2104), Expect = 0.0
Identities = 391/391 (100%), Positives = 391/391 (100%)
Query: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV
Sbjct: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
Query: 61 QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY
Sbjct: 61 QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIY 120
Query: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI
Sbjct: 121 MPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLI 180
Query: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT
Sbjct: 181 ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRT 240
Query: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK
Sbjct: 241 RAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDK 300
Query: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA
Sbjct: 301 HFWITLNNIPVEGTGPWILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAGTAA 360
Query: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
PREALGPFHLKAACSAHQNKWGFWNCYLHLK
Sbjct: 361 PREALGPFHLKAACSAHQNKWGFWNCYLHLK 391
>gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform C [Homo sapiens]
Length = 402
Score = 298 bits (764), Expect = 4e-81
Identities = 162/341 (47%), Positives = 218/341 (63%), Gaps = 17/341 (4%)
Query: 1 MKVWSCYLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTV 60
M W TL ++I Y+ +S P S + + + R C+ AL V
Sbjct: 1 MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKS--YEKLNSSSERYFRKTACNHALEKMPV 58
Query: 61 ----QVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLF 116
+LPS L ++ C Y+ +NHYIT+PLS EEAAFPLAYVM I +DFDTFE LF
Sbjct: 59 FLWENILPSPLRSV----PCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLF 114
Query: 117 WAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACM 176
AIYMPQNVYC+HVD+ A ++K +V +LL CF NAFI+S++E ++Y G SRLQADL C+
Sbjct: 115 RAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCL 174
Query: 177 RDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHR 236
+DL+AS V W+YV NT DFPLKTNREIVQ+LK NITP ++ + +R KY H+
Sbjct: 175 KDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQ 234
Query: 237 EYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTY 296
E+ + FV + K+ PP QL I+FG++YVALTR+FV F L ++ AI+LLQ S+DTY
Sbjct: 235 EHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTY 294
Query: 297 SPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330
SPD+HFW+TLN + V G+ P W + A+ ++RH
Sbjct: 295 SPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRH 335
>gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform B [Homo sapiens]
Length = 400
Score = 292 bits (747), Expect = 4e-79
Identities = 157/331 (47%), Positives = 213/331 (64%), Gaps = 11/331 (3%)
Query: 7 YLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTVQVLPSA 66
YL II++ +II V + S Q ++ L +C + +NGKT + +
Sbjct: 7 YLFIISVSSVIIFIVFSVFNFGGDPSFQRLNIS---DPLRLTQVCTSFINGKTRFLWKNK 63
Query: 67 LSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVY 126
L + SC Y+ ++HYIT PLS EEA FPLAY+M I FDTF LF AIYMPQN+Y
Sbjct: 64 LM-IHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIY 122
Query: 127 CIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQW 186
C+HVD+ AT +FK AV +LL CF NAF++S+ E ++YGG SRLQADL C+RDL A V W
Sbjct: 123 CVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSW 182
Query: 187 RYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV 246
+YV NT DFPLKTN+EIVQYLK NITP ++ + R KY H+E+ + ++V
Sbjct: 183 KYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV 242
Query: 247 LKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
++ K PPP L I+FGS+YVAL+REF +F L++ A++LLQ S+DT+SPD+HFW+TL
Sbjct: 243 IRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTL 302
Query: 307 NNIP-VEGTGP---W---ILAVNSGSCQNRH 330
N IP V G+ P W + A+ ++RH
Sbjct: 303 NRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 333
>gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform A [Homo sapiens]
Length = 402
Score = 291 bits (746), Expect = 5e-79
Identities = 146/287 (50%), Positives = 194/287 (67%), Gaps = 7/287 (2%)
Query: 51 CDAALNGKTVQVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFD 110
C GK +AL T +C Y++ +HY+T LS EEA FPLAY +TI +DF
Sbjct: 49 CHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFG 108
Query: 111 TFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQ 170
TFE LF AIYMPQNVYC+H+D+ AT FK AV +LL CF NAF++S+ E ++YGG SRLQ
Sbjct: 109 TFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQ 168
Query: 171 ADLACMRDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTER 230
ADL C+ DL+AS V W+YV NT DFPLKTNREIVQYLK NITP ++ + R
Sbjct: 169 ADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGR 228
Query: 231 IKYTHREYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQ 290
KY H+E +++V+K K K+PPP + I+FG++YVALTR+F +F L +++A++LL
Sbjct: 229 TKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLS 288
Query: 291 RSQDTYSPDKHFWITLNNIP-VEGTGP---W---ILAVNSGSCQNRH 330
S+DTYSPD+HFW+TLN IP V G+ P W + A+ ++RH
Sbjct: 289 WSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 335
>gi|190684701 glucosaminyl (N-acetyl) transferase family member 7
[Homo sapiens]
Length = 430
Score = 213 bits (542), Expect = 2e-55
Identities = 104/228 (45%), Positives = 148/228 (64%), Gaps = 3/228 (1%)
Query: 84 HYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVS 143
H+IT PLS EE F LAY++TI ++ F L AIY+PQNVYCIHVD+ A + +K AV
Sbjct: 96 HFITRPLSAEEGDFSLAYIITIHKELAMFVQLLRAIYVPQNVYCIHVDEKAPMKYKTAVQ 155
Query: 144 ELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDHDFPLKTNR 203
L+ CF N FISS++E + Y G +RLQAD+ CM+ L+ S QW YV N DFP+KTNR
Sbjct: 156 TLVNCFENVFISSKTEKVAYAGFTRLQADINCMKVLVHSKFQWNYVINLCGQDFPIKTNR 215
Query: 204 EIVQYLKTMNWT--NITPNLVSVLKSTERIKYTHREYRTRAHAFVLKKHKKKSPPPRQLK 261
EI+ Y+++ W+ NITP ++ L + +H E+ + + ++ K PP L
Sbjct: 216 EIIHYIRS-KWSDKNITPGVIQPLHIKSKTSQSHLEFVPKGSIYAPPNNRFKDKPPHNLT 274
Query: 262 IHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNI 309
I+FGS+Y LTR+FV F L + A ++LQ S+D SP++H+W+TLN +
Sbjct: 275 IYFGSAYYVLTRKFVEFILTDIHAKDMLQWSKDIRSPEQHYWVTLNRL 322
>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
sapiens]
Length = 438
Score = 193 bits (490), Expect = 3e-49
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 4/231 (1%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C ++ E +I PLS EE FP+AY M I + + FE L A+Y PQN+YC+HVD+ +
Sbjct: 110 CEHFKAERKFIQFPLSKEEVEFPIAYSMVIHEKIENFERLLRAVYAPQNIYCVHVDEKSP 169
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
FK AV ++ CF N FI+S+ ++Y SR+QADL CM DL+ S+V W+Y NT
Sbjct: 170 ETFKEAVKAIISCFPNVFIASKLVRVVYASWSRVQADLNCMEDLLQSSVPWKYFLNTCGT 229
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVLKKHKKKSP 255
DFP+K+N E+VQ LK +N N + V R KY R H +KKK P
Sbjct: 230 DFPIKSNAEMVQALKMLNGRNSMESEVPPKHKETRWKYHFEVVRDTLHL----TNKKKDP 285
Query: 256 PPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
PP L + G++Y+ +R+FV L N + +L++ +DTYSPD+H W TL
Sbjct: 286 PPYNLTMFTGNAYIVASRDFVQHVLKNPKSQQLIEWVKDTYSPDEHLWATL 336
>gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Homo
sapiens]
Length = 453
Score = 183 bits (465), Expect = 2e-46
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C Y Y +S EE +FP+AY + + +D E L AIY N+YCIH D+ A
Sbjct: 110 CDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAP 169
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
FK+A++ L +CFSN FI+S+ E + Y SRLQADL C+ DL+ S++QW+YV N
Sbjct: 170 DTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQ 229
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV---LKKHKK 252
DFPLK+N E+V LK +N N+ + ER Y H E R + +V ++ +
Sbjct: 230 DFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTNIS 288
Query: 253 KSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
K PP ++I GS+Y L++ FV + N I + S+DTYSPD+HFW TL +P
Sbjct: 289 KEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346
>gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 175 bits (443), Expect = 7e-44
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C ++ YI PLS EEA FP+AY + + + + L AIYMPQN YCIHVD +
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
+ AV + CFSN F++S+ E ++Y SR+QADL CM+DL A + W+Y+ N
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
DFP+KTN EIV+ LK + N NL TER+ +H+E R + V+
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270
Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
K PP + + GS+Y ++RE+V + L N+ +L++ +QDTYSPD++ W T+ IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330
Query: 311 -VEGTGP 316
V G+ P
Sbjct: 331 EVPGSLP 337
>gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 175 bits (443), Expect = 7e-44
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C ++ YI PLS EEA FP+AY + + + + L AIYMPQN YCIHVD +
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
+ AV + CFSN F++S+ E ++Y SR+QADL CM+DL A + W+Y+ N
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
DFP+KTN EIV+ LK + N NL TER+ +H+E R + V+
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270
Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
K PP + + GS+Y ++RE+V + L N+ +L++ +QDTYSPD++ W T+ IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330
Query: 311 -VEGTGP 316
V G+ P
Sbjct: 331 EVPGSLP 337
>gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 175 bits (443), Expect = 7e-44
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C ++ YI PLS EEA FP+AY + + + + L AIYMPQN YCIHVD +
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
+ AV + CFSN F++S+ E ++Y SR+QADL CM+DL A + W+Y+ N
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
DFP+KTN EIV+ LK + N NL TER+ +H+E R + V+
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270
Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
K PP + + GS+Y ++RE+V + L N+ +L++ +QDTYSPD++ W T+ IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330
Query: 311 -VEGTGP 316
V G+ P
Sbjct: 331 EVPGSLP 337
>gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 175 bits (443), Expect = 7e-44
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C ++ YI PLS EEA FP+AY + + + + L AIYMPQN YCIHVD +
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
+ AV + CFSN F++S+ E ++Y SR+QADL CM+DL A + W+Y+ N
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
DFP+KTN EIV+ LK + N NL TER+ +H+E R + V+
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270
Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
K PP + + GS+Y ++RE+V + L N+ +L++ +QDTYSPD++ W T+ IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330
Query: 311 -VEGTGP 316
V G+ P
Sbjct: 331 EVPGSLP 337
>gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 175 bits (443), Expect = 7e-44
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 15/247 (6%)
Query: 76 CPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAAT 135
C ++ YI PLS EEA FP+AY + + + + L AIYMPQN YCIHVD +
Sbjct: 100 CSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSE 159
Query: 136 IDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDH 195
+ AV + CFSN F++S+ E ++Y SR+QADL CM+DL A + W+Y+ N
Sbjct: 160 DSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCGM 219
Query: 196 DFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFVL-----KKH 250
DFP+KTN EIV+ LK + N NL TER+ +H+E R + V+
Sbjct: 220 DFPIKTNLEIVRKLKLLMGEN---NL-----ETERMP-SHKEERWKKRYEVVNGKLTNTG 270
Query: 251 KKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIP 310
K PP + + GS+Y ++RE+V + L N+ +L++ +QDTYSPD++ W T+ IP
Sbjct: 271 TVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIP 330
Query: 311 -VEGTGP 316
V G+ P
Sbjct: 331 EVPGSLP 337
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 56.6 bits (135), Expect = 4e-08
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 28/251 (11%)
Query: 99 LAYVMTI-SQDFDTFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQ 157
+AY++ + + + L A+Y Q+ + IHVDK + + V EL + + N ++
Sbjct: 234 IAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREVV-ELAQGYDNVRVTPW 292
Query: 158 SEYIIYGGKSRLQADLACMRDLI-ASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTN 216
I+GG S L+ L MRDL+ W + N D+P +TN E+V +L N
Sbjct: 293 RMVTIWGGASLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRDKN 352
Query: 217 ITPNLVSVLKSTERIKYTHRE------YRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVA 270
+ + ++ ++ + +H + L + + P + + GS +
Sbjct: 353 FLKS-----HGRDNSRFIKKQGLDRLFHECDSHMWRLGERQ----IPAGIVVDGGSDWFV 403
Query: 271 LTREFVHFALY--NKIAIELLQRSQDTYSPDKHFWITL--NNIPVEGTGPWILAVNSGS- 325
LTR FV + +Y + + +L Q T P + F+ T+ N++ E L V + +
Sbjct: 404 LTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACETLVDNNLRVTNWNR 463
Query: 326 -----CQNRHI 331
CQ +HI
Sbjct: 464 KLGCKCQYKHI 474
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 55.1 bits (131), Expect = 1e-07
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 115 LFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLA 174
+F AIY + Y IHVDK + + V ++ +SN ++ I+GG S L L
Sbjct: 345 MFKAIYHKDHFYYIHVDKRSNYLHR-QVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQ 403
Query: 175 CMRDLIASTV-QWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKY 233
MRDL+ T W + N D+P++TN ++V +L N + + ++
Sbjct: 404 SMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKS-----HGRDNARF 458
Query: 234 THREYRTR------AHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALY--NKIA 285
++ R AH + L + P + + GS + L R FV + + + +
Sbjct: 459 IRKQGLDRLFLECDAHMWRLGDRR----IPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLV 514
Query: 286 IELLQRSQDTYSPDKHFWIT-LNNIP 310
++ Q T P + F+ T L N P
Sbjct: 515 TKMKQFYSYTLLPAESFFHTVLENSP 540
>gi|31982895 THAP domain containing 4 [Homo sapiens]
Length = 577
Score = 32.0 bits (71), Expect = 0.98
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 195 HDFPLKTNREIVQYLKTMNWTNITPNLVSVLKS--------TERIKYTHREYRTRAHAFV 246
H FPLK ++ ++Q+LK + N TP S L S ++R++ HR + A +
Sbjct: 25 HRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSKRLEDQHRLLKPTAVPSI 84
Query: 247 LKKHKKK 253
+KK
Sbjct: 85 FHLTEKK 91
>gi|93204865 hypothetical protein LOC57724 [Homo sapiens]
Length = 2579
Score = 29.6 bits (65), Expect = 4.9
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 266 SSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITLNNIPVEGTGPWILAV-NSG 324
S Y+A + F+ + + I +E+ +QD + K +L+++ ++ PWIL + ++
Sbjct: 1921 SPYMADVKTFLGYLVKRLIDLEMTCLAQDPTASRKTVLKSLHSVIIQLFKPWILVLEDNE 1980
Query: 325 SCQNRH 330
S Q RH
Sbjct: 1981 SSQQRH 1986
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|13375642 kringle-containing transmembrane protein 2 isoform b
precursor [Homo sapiens]
Length = 420
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 318 ILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAG 357
+ V+ GSCQ P+G+ + +P NCS A G
Sbjct: 211 VYEVSVGSCQGNWTAPQGVIYSPDFPDEYGPDRNCSWALG 250
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
>gi|27437008 kringle-containing transmembrane protein 2 isoform d
precursor [Homo sapiens]
Length = 462
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 318 ILAVNSGSCQNRHICPRGLEFQQQYPVNSFGGNNCSIAAG 357
+ V+ GSCQ P+G+ + +P NCS A G
Sbjct: 211 VYEVSVGSCQGNWTAPQGVIYSPDFPDEYGPDRNCSWALG 250
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 248 KKHKKKSPPPRQLKIHFGSSYVALTREFVH--FALYNKI 284
K+ K++SP P+ K+H G +T++ + F+ Y KI
Sbjct: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,081,830
Number of Sequences: 37866
Number of extensions: 628378
Number of successful extensions: 1290
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1260
Number of HSP's gapped (non-prelim): 29
length of query: 391
length of database: 18,247,518
effective HSP length: 104
effective length of query: 287
effective length of database: 14,309,454
effective search space: 4106813298
effective search space used: 4106813298
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.