BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239742716 PREDICTED: hypothetical protein XP_002342633 [Homo sapiens] (170 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754173 PREDICTED: hypothetical protein [Homo sapiens] 332 7e-92 gi|239748693 PREDICTED: hypothetical protein XP_002346765 [Homo ... 332 7e-92 gi|239742716 PREDICTED: hypothetical protein XP_002342633 [Homo ... 332 7e-92 gi|134142826 pericentriolar material 1 [Homo sapiens] 30 0.77 gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 30 1.0 gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 30 1.0 gi|46409304 glutamate-rich 1 [Homo sapiens] 29 1.7 gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 29 1.7 gi|239754351 PREDICTED: hypothetical protein [Homo sapiens] 28 2.9 gi|239748899 PREDICTED: hypothetical protein [Homo sapiens] 28 2.9 gi|239742923 PREDICTED: hypothetical protein XP_002342686 [Homo ... 28 2.9 gi|23111026 sorting nexin 11 [Homo sapiens] 28 2.9 gi|23111028 sorting nexin 11 [Homo sapiens] 28 2.9 gi|194018550 c-Maf-inducing protein isoform C-mip [Homo sapiens] 28 3.8 gi|29789255 c-Maf-inducing protein isoform Tc-mip [Homo sapiens] 28 3.8 gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens] 28 3.8 gi|109826351 melanophilin isoform 2 [Homo sapiens] 28 3.8 gi|13129108 melanophilin isoform 1 [Homo sapiens] 28 3.8 gi|82659087 staufen isoform b [Homo sapiens] 28 5.0 gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 27 6.5 gi|55749769 CWC22 spliceosome-associated protein homolog [Homo s... 27 6.5 gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 27 8.5 gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 27 8.5 gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 27 8.5 gi|60097902 filaggrin [Homo sapiens] 27 8.5 gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 27 8.5 gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 27 8.5 gi|118402582 cell division cycle 20 [Homo sapiens] 27 8.5 gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 27 8.5 gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 27 8.5 >gi|239754173 PREDICTED: hypothetical protein [Homo sapiens] Length = 170 Score = 332 bits (852), Expect = 7e-92 Identities = 170/170 (100%), Positives = 170/170 (100%) Query: 1 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL 60 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL Sbjct: 1 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL 60 Query: 61 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT 120 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT Sbjct: 61 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT 120 Query: 121 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK Sbjct: 121 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 >gi|239748693 PREDICTED: hypothetical protein XP_002346765 [Homo sapiens] Length = 170 Score = 332 bits (852), Expect = 7e-92 Identities = 170/170 (100%), Positives = 170/170 (100%) Query: 1 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL 60 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL Sbjct: 1 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL 60 Query: 61 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT 120 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT Sbjct: 61 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT 120 Query: 121 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK Sbjct: 121 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 >gi|239742716 PREDICTED: hypothetical protein XP_002342633 [Homo sapiens] Length = 170 Score = 332 bits (852), Expect = 7e-92 Identities = 170/170 (100%), Positives = 170/170 (100%) Query: 1 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL 60 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL Sbjct: 1 MVVSISQLQIQIQVLNESIATERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDL 60 Query: 61 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT 120 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT Sbjct: 61 DFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLT 120 Query: 121 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK Sbjct: 121 WSEPSWTLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 >gi|134142826 pericentriolar material 1 [Homo sapiens] Length = 2024 Score = 30.4 bits (67), Expect = 0.77 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 16 NESIATERKVFRNDNSSGRKP--SVPTFFQSVCSEGGSRPKDSQT-DLDFSSSRA----- 67 N S +E++ NSSG+ + P F+S S G +P++ + + + SSR Sbjct: 1155 NISTPSEQQQPLAQNSSGKTEYMAFPKPFESSSSIGAEKPRNKKLPEEEVESSRTPWLYE 1214 Query: 68 --GAAEKPPLDTGSLKTGEKSGRENR 91 G EKP + TG + EKS NR Sbjct: 1215 QEGEVEKPFIKTGFSVSVEKSTSSNR 1240 >gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo sapiens] Length = 340 Score = 30.0 bits (66), Expect = 1.0 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 13/77 (16%) Query: 42 FQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEK---------SGRENRG 92 FQ + SE G+ ++ + ++ AGA +TG++ GE S E G Sbjct: 102 FQDIPSEAGAAGEEEEAGDGGAAGAAGAIG----ETGAVGKGEAEATGEGGSASEAEGAG 157 Query: 93 ETGASASLRVRVRARQS 109 E GA LRV AR+S Sbjct: 158 EGGAGDELRVAEEARES 174 >gi|169216749 PREDICTED: similar to Putative paraneoplastic antigen-like protein 6B-like protein [Homo sapiens] Length = 340 Score = 30.0 bits (66), Expect = 1.0 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 13/77 (16%) Query: 42 FQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEK---------SGRENRG 92 FQ + SE G+ ++ + ++ AGA +TG++ GE S E G Sbjct: 102 FQDIPSEAGAAGEEEEAGDGGAAGAAGAIG----ETGAVGKGEAEATGEGGSASEAEGAG 157 Query: 93 ETGASASLRVRVRARQS 109 E GA LRV AR+S Sbjct: 158 EGGAGDELRVAEEARES 174 >gi|46409304 glutamate-rich 1 [Homo sapiens] Length = 443 Score = 29.3 bits (64), Expect = 1.7 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 52 RPKDSQTDLDFSSSRAGAAEKPPLDTGS---LKTGEKSGRENRGETGASASLRVRVRARQ 108 +P+DS + A E+ +DT GE+ ++ R E GA AS RARQ Sbjct: 191 QPEDSSNE---GEGVGEACEEDGVDTSEEDPTLAGEEDVKDTREEDGADASEEDLTRARQ 247 Query: 109 SRGASS 114 GA + Sbjct: 248 EEGADA 253 >gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] Length = 1729 Score = 29.3 bits (64), Expect = 1.7 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Query: 44 SVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASL 100 S C E G R S + G + PL+ L GE SG E +GE +S+SL Sbjct: 1371 SQCPEPGLRHNGSLSP--------GLEARDPLEARELGVGETSGPETQGEDYSSSSL 1419 >gi|239754351 PREDICTED: hypothetical protein [Homo sapiens] Length = 174 Score = 28.5 bits (62), Expect = 2.9 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 66 RAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLTWSEPS 125 RAGA +PPL SL + R + GA+ + + RA + TW+ P Sbjct: 20 RAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVERERD-------TWA-PP 71 Query: 126 WTLRAPLLKISHPNLLPNI 144 W L A + ++ P +P I Sbjct: 72 WPLPAQVASLAFPAPVPGI 90 >gi|239748899 PREDICTED: hypothetical protein [Homo sapiens] Length = 174 Score = 28.5 bits (62), Expect = 2.9 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 66 RAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLTWSEPS 125 RAGA +PPL SL + R + GA+ + + RA + TW+ P Sbjct: 20 RAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVERERD-------TWA-PP 71 Query: 126 WTLRAPLLKISHPNLLPNI 144 W L A + ++ P +P I Sbjct: 72 WPLPAQVASLAFPAPVPGI 90 >gi|239742923 PREDICTED: hypothetical protein XP_002342686 [Homo sapiens] Length = 174 Score = 28.5 bits (62), Expect = 2.9 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 66 RAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLSLTWSEPS 125 RAGA +PPL SL + R + GA+ + + RA + TW+ P Sbjct: 20 RAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVERERD-------TWA-PP 71 Query: 126 WTLRAPLLKISHPNLLPNI 144 W L A + ++ P +P I Sbjct: 72 WPLPAQVASLAFPAPVPGI 90 >gi|23111026 sorting nexin 11 [Homo sapiens] Length = 270 Score = 28.5 bits (62), Expect = 2.9 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 36 PSVPTFFQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKT 82 P++P +C + G RPK+ + L G PLD G L+T Sbjct: 221 PTLPPLSSPLCCDFG-RPKEGTSTLQSVRRAVGGDHAVPLDPGQLET 266 >gi|23111028 sorting nexin 11 [Homo sapiens] Length = 270 Score = 28.5 bits (62), Expect = 2.9 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 36 PSVPTFFQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKT 82 P++P +C + G RPK+ + L G PLD G L+T Sbjct: 221 PTLPPLSSPLCCDFG-RPKEGTSTLQSVRRAVGGDHAVPLDPGQLET 266 >gi|194018550 c-Maf-inducing protein isoform C-mip [Homo sapiens] Length = 773 Score = 28.1 bits (61), Expect = 3.8 Identities = 11/44 (25%), Positives = 21/44 (47%) Query: 127 TLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 ++ P HP +LPN+ + + S Y++ N+ P +K Sbjct: 310 SMHGPTGHCPHPRVLPNLVAVCLAAIYSCYEEFINSRDNSPSLK 353 >gi|29789255 c-Maf-inducing protein isoform Tc-mip [Homo sapiens] Length = 679 Score = 28.1 bits (61), Expect = 3.8 Identities = 11/44 (25%), Positives = 21/44 (47%) Query: 127 TLRAPLLKISHPNLLPNIQSAAIQQKISLYQDSSNTSQGKPDVK 170 ++ P HP +LPN+ + + S Y++ N+ P +K Sbjct: 216 SMHGPTGHCPHPRVLPNLVAVCLAAIYSCYEEFINSRDNSPSLK 259 >gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens] Length = 743 Score = 28.1 bits (61), Expect = 3.8 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 59 DLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSRGASSLCLS 118 D S RA AA KP LDT SL G + RG TG +A+ + R G Sbjct: 47 DFSVSVERALAA-KPGLDTYSLGGGGAARVRVRGSTGVAAAAGLHRYLRDFCGC-----H 100 Query: 119 LTWSEPSWTLRAPL 132 + WS L PL Sbjct: 101 VAWSGSQLRLPRPL 114 >gi|109826351 melanophilin isoform 2 [Homo sapiens] Length = 572 Score = 28.1 bits (61), Expect = 3.8 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 5 ISQLQIQIQVLNESIATERKVFRNDNSSG---RKPSVPTFFQSVCSEGGSRPKDSQTDLD 61 + Q + ++ + IA R SG RK ++P F V + G RP+D D Sbjct: 448 VQQAESEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNAD-- 505 Query: 62 FSSSRAGAAEKPPL 75 SS A A P L Sbjct: 506 -PSSEAKAMAVPYL 518 >gi|13129108 melanophilin isoform 1 [Homo sapiens] Length = 600 Score = 28.1 bits (61), Expect = 3.8 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 5 ISQLQIQIQVLNESIATERKVFRNDNSSG---RKPSVPTFFQSVCSEGGSRPKDSQTDLD 61 + Q + ++ + IA R SG RK ++P F V + G RP+D D Sbjct: 476 VQQAESEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNAD-- 533 Query: 62 FSSSRAGAAEKPPL 75 SS A A P L Sbjct: 534 -PSSEAKAMAVPYL 546 >gi|82659087 staufen isoform b [Homo sapiens] Length = 577 Score = 27.7 bits (60), Expect = 5.0 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 9 QIQIQVLNESIATERKVFRNDNSSGRKP---SVPTFFQSVCSEGGSRP-KDSQTDLDFSS 64 Q+Q+QV N S A N N S S+P+ S+ SE RP ++S + Sbjct: 3 QVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSASIT 62 Query: 65 SRAGAAEK--PPLDTGSL--KTGEK 85 S + AAE P ++ +L K G+K Sbjct: 63 STSAAAESITPTVELNALCMKLGKK 87 >gi|223633935 hypothetical protein LOC254427 [Homo sapiens] Length = 435 Score = 27.3 bits (59), Expect = 6.5 Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 2/108 (1%) Query: 48 EGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRAR 107 E S P + + +D GA E L G+ G + + A A Sbjct: 96 ESTSSPSEPEDVIDLVQPAPGAGEAEGLPEGTQAAGPAPAGKEHRKQDAETPPPPDPPAP 155 Query: 108 QSRGASSLCLSLTWSEPSWTLRAPLLKISHPNLLPNIQSAAIQ-QKIS 154 ++ A L T P LRAP + HP LL ++ + + QKIS Sbjct: 156 ETLLAPPP-LPSTPDPPRRELRAPSPPVEHPRLLRSVPTPLVMAQKIS 202 >gi|55749769 CWC22 spliceosome-associated protein homolog [Homo sapiens] Length = 908 Score = 27.3 bits (59), Expect = 6.5 Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 21 TERKVFRNDNSSGRKPSVPTFFQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPP 74 T+RK R S GR+ + QS ++ K + +LD +R G A PP Sbjct: 83 TDRKRSRKSPSPGRRNPETSVTQSSSAQDEPATKKKKDELDPLLTRTGGAYIPP 136 >gi|224493919 zinc finger and SCAN domain containing 18 isoform 2 [Homo sapiens] Length = 374 Score = 26.9 bits (58), Expect = 8.5 Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 53 PKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGE 93 P+D+++D S R ++P D G+ K G K G+ Sbjct: 202 PQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 242 >gi|224493912 zinc finger and SCAN domain containing 18 isoform 3 [Homo sapiens] Length = 510 Score = 26.9 bits (58), Expect = 8.5 Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 53 PKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGE 93 P+D+++D S R ++P D G+ K G K G+ Sbjct: 338 PQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 378 >gi|226371704 zinc finger and SCAN domain containing 18 isoform 3 [Homo sapiens] Length = 510 Score = 26.9 bits (58), Expect = 8.5 Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 53 PKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGE 93 P+D+++D S R ++P D G+ K G K G+ Sbjct: 338 PQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 378 >gi|60097902 filaggrin [Homo sapiens] Length = 4061 Score = 26.9 bits (58), Expect = 8.5 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 17/86 (19%) Query: 43 QSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGREN------------ 90 Q+ SEG S D+Q+ + +AG ++ ++ ++GE+SGR Sbjct: 1718 QASDSEGHSEESDTQSVS--AHGQAGPHQQSHQESTRGQSGERSGRSGSFLYQVSTHEQS 1775 Query: 91 ---RGETGASASLRVRVRARQSRGAS 113 G TG S R R R Q+R +S Sbjct: 1776 ESAHGRTGPSTGGRQRSRHEQARDSS 1801 >gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] Length = 562 Score = 26.9 bits (58), Expect = 8.5 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 29 DNSSGRKPSV-PTFFQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSG 87 D ++ KP++ P F +G P + + D G AE P TG ++ + Sbjct: 3 DLANEEKPAIAPPVFVFQKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHA 62 Query: 88 RENRGETGASAS 99 E GASAS Sbjct: 63 LEPPAPAGASAS 74 >gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] Length = 567 Score = 26.9 bits (58), Expect = 8.5 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 29 DNSSGRKPSV-PTFFQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSG 87 D ++ KP++ P F +G P + + D G AE P TG ++ + Sbjct: 3 DLANEEKPAIAPPVFVFQKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHA 62 Query: 88 RENRGETGASAS 99 E GASAS Sbjct: 63 LEPPAPAGASAS 74 >gi|118402582 cell division cycle 20 [Homo sapiens] Length = 499 Score = 26.9 bits (58), Expect = 8.5 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 5/115 (4%) Query: 51 SRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGETGASASLRVRVRARQSR 110 ++P++SQT +A A D K SG+ G L+V + + Sbjct: 99 NQPENSQTPTKKEHQKAWALNLNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLYSQKATP 158 Query: 111 GASSLCLSLTWSEPSWTLRAPLLKIS-HPNLLP----NIQSAAIQQKISLYQDSS 160 G+S S P L AP ++ + NL+ N+ + A+ + L+ SS Sbjct: 159 GSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASS 213 >gi|224493905 zinc finger and SCAN domain containing 18 isoform 1 [Homo sapiens] Length = 566 Score = 26.9 bits (58), Expect = 8.5 Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 53 PKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGE 93 P+D+++D S R ++P D G+ K G K G+ Sbjct: 394 PQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 434 >gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5 [Homo sapiens] Length = 6907 Score = 26.9 bits (58), Expect = 8.5 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 34 RKPSVPTFFQSVCSEGGSRPKDSQTDLDFSSSRAGAAEKPPLDTGSLKTGEKSGRENRGE 93 +K PTF S G K+ + ++FS+ + E P ++K GEK +EN Sbjct: 676 KKQDQPTFDNS----GNILSKEEKATVEFSTDMS--VELPENYNQNIKAGEKHEKENEEF 729 Query: 94 TG 95 TG Sbjct: 730 TG 731 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.309 0.124 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,446,847 Number of Sequences: 37866 Number of extensions: 276683 Number of successful extensions: 793 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 781 Number of HSP's gapped (non-prelim): 36 length of query: 170 length of database: 18,247,518 effective HSP length: 95 effective length of query: 75 effective length of database: 14,650,248 effective search space: 1098768600 effective search space used: 1098768600 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.