Search of human proteins with 239742093

Search of human proteins with 239742093

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]
         (141 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]       275   7e-75
gi|4885385 H3 histone, family 3B [Homo sapiens]                       214   2e-56
gi|4504279 H3 histone, family 3A [Homo sapiens]                       214   2e-56
gi|53793688 histone cluster 2, H3a [Homo sapiens]                     207   2e-54
gi|31742503 histone cluster 2, H3c [Homo sapiens]                     207   2e-54
gi|183076548 histone cluster 2, H3d [Homo sapiens]                    207   2e-54
gi|4504287 histone cluster 1, H3e [Homo sapiens]                      206   7e-54
gi|4504295 histone cluster 1, H3h [Homo sapiens]                      206   7e-54
gi|4504289 histone cluster 1, H3i [Homo sapiens]                      206   7e-54
gi|4504281 histone cluster 1, H3a [Homo sapiens]                      206   7e-54
gi|10440560 histone cluster 1, H3f [Homo sapiens]                     206   7e-54
gi|21071021 histone cluster 1, H3d [Homo sapiens]                     206   7e-54
gi|4504297 histone cluster 1, H3b [Homo sapiens]                      206   7e-54
gi|4504293 histone cluster 1, H3j [Homo sapiens]                      206   7e-54
gi|4504285 histone cluster 1, H3c [Homo sapiens]                      206   7e-54
gi|4504291 H3 histone family, member H [Homo sapiens]                 206   7e-54
gi|4504299 histone cluster 3, H3 [Homo sapiens]                       200   3e-52
gi|188528667 histone H3-like [Homo sapiens]                           197   2e-51
gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]          181   2e-46
gi|169167761 PREDICTED: similar to HIStone family member (his-72...   179   5e-46
gi|88987392 PREDICTED: similar to HIStone family member (his-72)...   179   5e-46
gi|41147170 PREDICTED: similar to HIStone family member (his-72)...   179   5e-46
gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]          130   5e-31
gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]          130   5e-31
gi|4502775 centromere protein A isoform a [Homo sapiens]               93   8e-20
gi|109637779 centromere protein A isoform b [Homo sapiens]             70   8e-13
gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]    30   0.50 
gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]    30   0.50 
gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]    30   0.50 
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]    29   1.5  

>gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]
          Length = 141

 Score =  275 bits (704), Expect = 7e-75
 Identities = 141/141 (100%), Positives = 141/141 (100%)

Query: 1   MDLQKTIDIKKTDCLQIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRY 60
           MDLQKTIDIKKTDCLQIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRY
Sbjct: 1   MDLQKTIDIKKTDCLQIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRY 60

Query: 61  QKATELLIRKLRFQRLVQEIAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHA 120
           QKATELLIRKLRFQRLVQEIAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHA
Sbjct: 61  QKATELLIRKLRFQRLVQEIAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHA 120

Query: 121 KRLTIMPKEIQLARRIQGKRA 141
           KRLTIMPKEIQLARRIQGKRA
Sbjct: 121 KRLTIMPKEIQLARRIQGKRA 141


>gi|4885385 H3 histone, family 3B [Homo sapiens]
          Length = 136

 Score =  214 bits (544), Expect = 2e-56
 Identities = 109/122 (89%), Positives = 116/122 (95%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAPSTGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQSAAIGALQEASEAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504279 H3 histone, family 3A [Homo sapiens]
          Length = 136

 Score =  214 bits (544), Expect = 2e-56
 Identities = 109/122 (89%), Positives = 116/122 (95%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAPSTGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQSAAIGALQEASEAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|53793688 histone cluster 2, H3a [Homo sapiens]
          Length = 136

 Score =  207 bits (528), Expect = 2e-54
 Identities = 105/122 (86%), Positives = 115/122 (94%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEASEAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|31742503 histone cluster 2, H3c [Homo sapiens]
          Length = 136

 Score =  207 bits (528), Expect = 2e-54
 Identities = 105/122 (86%), Positives = 115/122 (94%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEASEAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|183076548 histone cluster 2, H3d [Homo sapiens]
          Length = 136

 Score =  207 bits (528), Expect = 2e-54
 Identities = 105/122 (86%), Positives = 115/122 (94%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEASEAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504287 histone cluster 1, H3e [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504295 histone cluster 1, H3h [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504289 histone cluster 1, H3i [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504281 histone cluster 1, H3a [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|10440560 histone cluster 1, H3f [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|21071021 histone cluster 1, H3d [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504297 histone cluster 1, H3b [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504293 histone cluster 1, H3j [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504285 histone cluster 1, H3c [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504291 H3 histone family, member H [Homo sapiens]
          Length = 136

 Score =  206 bits (523), Expect = 7e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|4504299 histone cluster 3, H3 [Homo sapiens]
          Length = 136

 Score =  200 bits (509), Expect = 3e-52
 Identities = 100/122 (81%), Positives = 112/122 (91%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TK A KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRL++E
Sbjct: 15  KAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD KTDLRFQS+A+ ALQEA E+YLVGLFED+NLC IHAKR+TIMPK+IQLARRI+G+
Sbjct: 75  IAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGE 134

Query: 140 RA 141
           RA
Sbjct: 135 RA 136


>gi|188528667 histone H3-like [Homo sapiens]
          Length = 135

 Score =  197 bits (502), Expect = 2e-51
 Identities = 103/122 (84%), Positives = 111/122 (90%), Gaps = 1/122 (0%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           KA RKQL TKAA KS PST GVK PH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 15  KAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 73

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQD  TDLRFQSAA+GALQEASEAYLVGL ED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 74  IAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133

Query: 140 RA 141
           RA
Sbjct: 134 RA 135


>gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 147

 Score =  181 bits (458), Expect = 2e-46
 Identities = 89/122 (72%), Positives = 108/122 (88%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           +A RK L TKAA K A  TGG+KKPH Y+PGT+ALREIR+YQK+T+LL+RKL FQRLV+E
Sbjct: 15  QAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139
           IAQ +  DLRFQSAAIGALQEASEAYLV LFED+NLCAIHA+R+TIMP+++QLARR++G+
Sbjct: 75  IAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQLARRLRGE 134

Query: 140 RA 141
            A
Sbjct: 135 GA 136


>gi|169167761 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  179 bits (455), Expect = 5e-46
 Identities = 88/118 (74%), Positives = 106/118 (89%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           +A RK L TKAA K AP TGG+KKPH Y+PGT+ALREIR+YQK+T+LL+RKL FQRLV+E
Sbjct: 15  QAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQ 137
           IAQ +  DLRFQSAAIGALQEASEAYLV LFED+NLCAIHA+R+TIMP+++QLARR++
Sbjct: 75  IAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQLARRLR 132


>gi|88987392 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  179 bits (455), Expect = 5e-46
 Identities = 88/118 (74%), Positives = 106/118 (89%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           +A RK L TKAA K AP TGG+KKPH Y+PGT+ALREIR+YQK+T+LL+RKL FQRLV+E
Sbjct: 15  QAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQ 137
           IAQ +  DLRFQSAAIGALQEASEAYLV LFED+NLCAIHA+R+TIMP+++QLARR++
Sbjct: 75  IAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQLARRLR 132


>gi|41147170 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  179 bits (455), Expect = 5e-46
 Identities = 88/118 (74%), Positives = 106/118 (89%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           +A RK L TKAA K AP TGG+KKPH Y+PGT+ALREIR+YQK+T+LL+RKL FQRLV+E
Sbjct: 15  QAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVRE 74

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQ 137
           IAQ +  DLRFQSAAIGALQEASEAYLV LFED+NLCAIHA+R+TIMP+++QLARR++
Sbjct: 75  IAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQLARRLR 132


>gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  130 bits (326), Expect = 5e-31
 Identities = 65/87 (74%), Positives = 75/87 (86%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           +A RK L TKAA K A  TGG+KKPH Y+PGT+ALREIR+YQK+T+LL+RKL FQRLV+E
Sbjct: 60  QAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVRE 119

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYL 106
           IAQ +  DLRFQSAAIGALQEASEAYL
Sbjct: 120 IAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  130 bits (326), Expect = 5e-31
 Identities = 65/87 (74%), Positives = 75/87 (86%)

Query: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79
           +A RK L TKAA K A  TGG+KKPH Y+PGT+ALREIR+YQK+T+LL+RKL FQRLV+E
Sbjct: 60  QAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQLLLRKLPFQRLVRE 119

Query: 80  IAQDLKTDLRFQSAAIGALQEASEAYL 106
           IAQ +  DLRFQSAAIGALQEASEAYL
Sbjct: 120 IAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|4502775 centromere protein A isoform a [Homo sapiens]
          Length = 140

 Score = 92.8 bits (229), Expect = 8e-20
 Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 19  RKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQ 78
           R+ +     T    +  PS G      H R     L+EIR+ QK+T LLIRKL F RL +
Sbjct: 14  RRRSPSPTPTPGPSRRGPSLGA-SSHQHSRRRQGWLKEIRKLQKSTHLLIRKLPFSRLAR 72

Query: 79  EIAQDLK--TDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRI 136
           EI        D  +Q+ A+ ALQEA+EA+LV LFED+ L  +HA R+T+ PK++QLARRI
Sbjct: 73  EICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRI 132

Query: 137 QG 138
           +G
Sbjct: 133 RG 134


>gi|109637779 centromere protein A isoform b [Homo sapiens]
          Length = 114

 Score = 69.7 bits (169), Expect = 8e-13
 Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 25/120 (20%)

Query: 19  RKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQ 78
           R+ +     T    +  PS G      H R     L+EIR+ QK+T LLIRKL F RL  
Sbjct: 14  RRRSPSPTPTPGPSRRGPSLGA-SSHQHSRRRQGWLKEIRKLQKSTHLLIRKLPFSRL-- 70

Query: 79  EIAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQG 138
                                 A+EA+LV LFED+ L  +HA R+T+ PK++QLARRI+G
Sbjct: 71  ----------------------AAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRG 108


>gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]
          Length = 1197

 Score = 30.4 bits (67), Expect = 0.50
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 16  QIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQR 75
           Q+  K A+++L  K A      +G       YR    AL  ++R ++  E  ++KL ++ 
Sbjct: 420 QMKLKHAQQELKNKQAEVKKMDSG-------YRKDQEALEAVKRLKEKLEAEMKKLNYEE 472

Query: 76  LVQEIAQDLKTDLRFQSAAIGALQEASEAYL 106
             +E   + +  L   S  IG L+E  EA L
Sbjct: 473 NKEESLLEKRRQL---SRDIGRLKETYEALL 500


>gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]
          Length = 1197

 Score = 30.4 bits (67), Expect = 0.50
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 16  QIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQR 75
           Q+  K A+++L  K A      +G       YR    AL  ++R ++  E  ++KL ++ 
Sbjct: 420 QMKLKHAQQELKNKQAEVKKMDSG-------YRKDQEALEAVKRLKEKLEAEMKKLNYEE 472

Query: 76  LVQEIAQDLKTDLRFQSAAIGALQEASEAYL 106
             +E   + +  L   S  IG L+E  EA L
Sbjct: 473 NKEESLLEKRRQL---SRDIGRLKETYEALL 500


>gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]
          Length = 1197

 Score = 30.4 bits (67), Expect = 0.50
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 16  QIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQR 75
           Q+  K A+++L  K A      +G       YR    AL  ++R ++  E  ++KL ++ 
Sbjct: 420 QMKLKHAQQELKNKQAEVKKMDSG-------YRKDQEALEAVKRLKEKLEAEMKKLNYEE 472

Query: 76  LVQEIAQDLKTDLRFQSAAIGALQEASEAYL 106
             +E   + +  L   S  IG L+E  EA L
Sbjct: 473 NKEESLLEKRRQL---SRDIGRLKETYEALL 500


>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
          Length = 1976

 Score = 28.9 bits (63), Expect = 1.5
 Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 2    DLQKTIDIKKTDCLQ-IDRKAARKQLGTKAAHKSAPSTGGVK---KPHHYRPGTVALREI 57
            DL + ++  KT+    +D  AA+++L TK   + A     ++   K H  +   +  R  
Sbjct: 1143 DLSEELEALKTELEDTLDTTAAQQELRTKREQEVAELKKALEEETKNHEAQIQDMRQRHA 1202

Query: 58   RRYQKATELLIRKLRFQRLVQEIAQDLKTDLRFQSAAIGALQEA-SEAYLVGLFEDSNLC 116
               ++ +E L +  RF+  +++  Q L+TD +  +  +  LQ+  +E+       D+ + 
Sbjct: 1203 TALEELSEQLEQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQ 1262

Query: 117  AIHAK 121
             +HAK
Sbjct: 1263 ELHAK 1267


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,477,336
Number of Sequences: 37866
Number of extensions: 153490
Number of successful extensions: 571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 83
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.