Search of human proteins with 239741682

Search of human proteins with 239741682

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo
sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo sap...   459   e-129
gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]          456   e-129
gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo sap...   441   e-124
gi|116812614 glycerol-3-phosphate acyltransferase 2, mitochondri...   395   e-110
gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase ...    76   2e-14
gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]         34   0.12 
gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo sapiens]    30   1.3  
gi|253795490 hypothetical protein LOC55793 isoform 4 [Homo sapiens]    30   1.3  
gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]    30   1.3  
gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]     30   1.3  
gi|94158609 hypothetical protein LOC55793 isoform 2 [Homo sapiens]     30   1.3  
gi|91106202 G protein-coupled receptor 22 [Homo sapiens]               30   1.3  
gi|38372909 jumonji domain containing 1B [Homo sapiens]                29   3.7  
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo...    28   6.3  
gi|118402584 F-box and WD repeat domain containing 2 [Homo sapiens]    28   6.3  
gi|223278410 hypothetical protein LOC374977 [Homo sapiens]             28   8.3  
gi|40217812 cell cycle progression 2 protein isoform 1 [Homo sap...    28   8.3  

>gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo
           sapiens]
          Length = 224

 Score =  459 bits (1180), Expect = e-129
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVRE 60
           MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVRE
Sbjct: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVRE 60

Query: 61  QWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLC 120
           QWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLC
Sbjct: 61  QWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLC 120

Query: 121 RLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW 180
           RLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW
Sbjct: 121 RLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW 180

Query: 181 TFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS 224
           TFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS
Sbjct: 181 TFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS 224


>gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]
          Length = 224

 Score =  456 bits (1172), Expect = e-129
 Identities = 223/224 (99%), Positives = 223/224 (99%)

Query: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVRE 60
           MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVRE
Sbjct: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVRE 60

Query: 61  QWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLC 120
           QWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLC
Sbjct: 61  QWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLC 120

Query: 121 RLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW 180
            LLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW
Sbjct: 121 CLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW 180

Query: 181 TFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS 224
           TFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS
Sbjct: 181 TFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS 224


>gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo
           sapiens]
          Length = 250

 Score =  441 bits (1135), Expect = e-124
 Identities = 223/250 (89%), Positives = 223/250 (89%), Gaps = 26/250 (10%)

Query: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK---- 56
           MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK    
Sbjct: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS 60

Query: 57  ----------------------LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 94
                                 LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD
Sbjct: 61  SYCYCQEVLDRLIQCGLLVAEELVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSD 120

Query: 95  DFKETEGQYSRLSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 154
           DFKETEGQYSRLSQQSHCPDFFLFLC LLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF
Sbjct: 121 DFKETEGQYSRLSQQSHCPDFFLFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLF 180

Query: 155 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 214
           QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL
Sbjct: 181 QFLQATAQEEGIFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKL 240

Query: 215 EQFIRQFICS 224
           EQFIRQFICS
Sbjct: 241 EQFIRQFICS 250


>gi|116812614 glycerol-3-phosphate acyltransferase 2, mitochondrial
           [Homo sapiens]
          Length = 795

 Score =  395 bits (1016), Expect = e-110
 Identities = 201/239 (84%), Positives = 208/239 (87%), Gaps = 21/239 (8%)

Query: 7   ACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK---------- 56
           ACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK          
Sbjct: 557 ACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQ 616

Query: 57  -----------LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSR 105
                      LV E+    RPACDTG++RLSRKLLWKPSGDFTDSDSDDF E +G+Y R
Sbjct: 617 EVLDRLIQCGLLVAEETPGSRPACDTGRQRLSRKLLWKPSGDFTDSDSDDFGEADGRYFR 676

Query: 106 LSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFLQATAQEEG 165
           LSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTE GYT+QLFQFLQATAQEEG
Sbjct: 677 LSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTELGYTEQLFQFLQATAQEEG 736

Query: 166 IFECADPKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFICS 224
           IFECADPKLAISA+WTFRDLGVLQQTPSPAGPRLHLSPTFAS DNQEKLEQFIRQFICS
Sbjct: 737 IFECADPKLAISAVWTFRDLGVLQQTPSPAGPRLHLSPTFASLDNQEKLEQFIRQFICS 795


>gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase
           [Homo sapiens]
          Length = 828

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 57  LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFF 116
           L  +QW           ++L   L W+   D  D DSD  +E    Y ++SQ      F 
Sbjct: 671 LAEQQW----------DKKLPEPLSWR--SDEEDEDSDFGEEQRDCYLKVSQSKEHQQFI 718

Query: 117 LFLCRLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFL-QATAQEEGIF-ECADPKL 174
            FL RLL PLL+A++ AA F+     P  E  Y  +L ++L   T +   ++ E A   L
Sbjct: 719 TFLQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCL 778

Query: 175 AISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFI 222
             +A+  F+D+GV ++T       L LS TF  Q N++KL ++I  F+
Sbjct: 779 VKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFV 826


>gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]
          Length = 163

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query: 4   PPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLL 48
           P PA     L  G  PP+G W+ Q     +QN ++ QILL +H L
Sbjct: 105 PLPASFPAVLPIGEQPPEGQWQHQAEHQQNQNRVWWQILLFLHNL 149


>gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo sapiens]
          Length = 327

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 6   PACAVRGLLA------GRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVR 59
           P C+V  LL         V PQ P  ++ +  LS N+L  +I+   H    +L+   L+ 
Sbjct: 82  PECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIA 141

Query: 60  EQWLRVRPA 68
           EQ+L    A
Sbjct: 142 EQFLETTAA 150


>gi|253795490 hypothetical protein LOC55793 isoform 4 [Homo sapiens]
          Length = 374

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 6   PACAVRGLLA------GRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVR 59
           P C+V  LL         V PQ P  ++ +  LS N+L  +I+   H    +L+   L+ 
Sbjct: 129 PECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIA 188

Query: 60  EQWLRVRPA 68
           EQ+L    A
Sbjct: 189 EQFLETTAA 197


>gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]
          Length = 517

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 6   PACAVRGLLA------GRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVR 59
           P C+V  LL         V PQ P  ++ +  LS N+L  +I+   H    +L+   L+ 
Sbjct: 272 PECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIA 331

Query: 60  EQWLRVRPA 68
           EQ+L    A
Sbjct: 332 EQFLETTAA 340


>gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]
          Length = 469

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 6   PACAVRGLLA------GRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVR 59
           P C+V  LL         V PQ P  ++ +  LS N+L  +I+   H    +L+   L+ 
Sbjct: 224 PECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIA 283

Query: 60  EQWLRVRPA 68
           EQ+L    A
Sbjct: 284 EQFLETTAA 292


>gi|94158609 hypothetical protein LOC55793 isoform 2 [Homo sapiens]
          Length = 327

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 6   PACAVRGLLA------GRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVR 59
           P C+V  LL         V PQ P  ++ +  LS N+L  +I+   H    +L+   L+ 
Sbjct: 82  PECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIA 141

Query: 60  EQWLRVRPA 68
           EQ+L    A
Sbjct: 142 EQFLETTAA 150


>gi|91106202 G protein-coupled receptor 22 [Homo sapiens]
          Length = 433

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 13/89 (14%)

Query: 24  WELQGILLLSQNELYRQILLLMHLLPQD-----------LLLLKLVREQWLRVRPACDTG 72
           WE + +L +S NE Y ++ +  HLL Q            +   K+++   +R+     TG
Sbjct: 190 WENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTG 249

Query: 73  QRRLSRKLLWKPSGDFTDSDSDDFKETEG 101
           Q++ +RK   K     T  ++ D  ++ G
Sbjct: 250 QKKKARKK--KTISLTTQHEATDMSQSSG 276


>gi|38372909 jumonji domain containing 1B [Homo sapiens]
          Length = 1761

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 56   KLVREQWLRVRPACDTGQRRLSRKLLWKP---SGDFTDSDSD 94
            K+ RE W + +P   +G  +  +  LWKP   S +F D D D
Sbjct: 1403 KIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD 1444


>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform
           b [Homo sapiens]
          Length = 1173

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 172 PKLAISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQE 212
           P L+ +   T    G  Q TPSPAGP   L P     D  +
Sbjct: 151 PALSRNVGMTVSQKGGPQPTPSPAGPGTQLGPITGEMDEAD 191


>gi|118402584 F-box and WD repeat domain containing 2 [Homo sapiens]
          Length = 454

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 17/49 (34%), Positives = 23/49 (46%)

Query: 43  LLMHLLPQDLLLLKLVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDS 91
           LL  L PQ LL   LV +QW +V  AC    +   + L W+      D+
Sbjct: 68  LLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDA 116


>gi|223278410 hypothetical protein LOC374977 [Homo sapiens]
          Length = 1323

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 40/152 (26%), Positives = 54/152 (35%), Gaps = 24/152 (15%)

Query: 1   MDPPPPACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK---- 56
           M P PP+C   GL +G +P   P   Q  +L   N L    L L+  L   L  +     
Sbjct: 17  MTPSPPSCGAPGLGSGTIPQPHPDMAQVPML---NLLPSPGLALVPDLNDSLSPVSGEAS 73

Query: 57  -LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDF 115
            LV E     RP         S ++    SG+  D DS D    + Q             
Sbjct: 74  GLVSEN--TPRPDDSRAIAPASLQITSSCSGEALDLDSKDVSRPDSQGR----------- 120

Query: 116 FLFLCRLLSPLLKAFAQAAAFLRQGQLPDTES 147
              LC   +P+L   +  A  L  G  P + S
Sbjct: 121 ---LCPASNPILSPSSTEAPRLSSGNHPQSNS 149


>gi|40217812 cell cycle progression 2 protein isoform 1 [Homo
           sapiens]
          Length = 631

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 50/190 (26%), Positives = 69/190 (36%), Gaps = 43/190 (22%)

Query: 22  GPWELQGILLLSQNELYRQILLLM----HLLPQDLLLLKLVREQWLRVRPACDTGQRRLS 77
           GP EL+ +L++   +  R + LL     HL+ +   L K V              Q ++S
Sbjct: 254 GPNELRKVLVMLAAQSRRSVPLLRAISYHLVQKPFSLTKDVLLDVAYAYGKLSFHQTQVS 313

Query: 78  RKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLCRLLSPLLKAFAQ----- 132
           ++L        TD  S     T G+ +      HC   F  L  L  PL +AFAQ     
Sbjct: 314 QRLA-------TDLLSLMPSLTSGEVA------HCAKSFALLKWLSLPLFEAFAQHVLNR 360

Query: 133 ------------AAAFLRQGQLPDTESGYTDQLFQFLQATAQEEGIFECADPKLAISAIW 180
                         AF R    PD E    DQ F  +      E      +P L +  +W
Sbjct: 361 AQDITLPHLCSVLLAFARLNFHPDQE----DQFFSLVHEKLGSE--LPGLEPALQVDLVW 414

Query: 181 TFRDLGVLQQ 190
               L VLQQ
Sbjct: 415 A---LCVLQQ 421


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,977,641
Number of Sequences: 37866
Number of extensions: 444814
Number of successful extensions: 1262
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1245
Number of HSP's gapped (non-prelim): 18
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.