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Search of human proteins with 239740771
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740771 PREDICTED: hypothetical protein [Homo sapiens]
(168 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740894 PREDICTED: hypothetical protein [Homo sapiens] 344 2e-95
gi|239740771 PREDICTED: hypothetical protein [Homo sapiens] 344 2e-95
gi|239740643 PREDICTED: hypothetical protein [Homo sapiens] 344 2e-95
gi|239754265 PREDICTED: hypothetical protein [Homo sapiens] 233 8e-62
gi|239748803 PREDICTED: hypothetical protein [Homo sapiens] 233 8e-62
gi|239742840 PREDICTED: hypothetical protein XP_002342659 [Homo ... 233 8e-62
gi|239740823 PREDICTED: hypothetical protein XP_002344065 [Homo ... 233 8e-62
gi|239740720 PREDICTED: hypothetical protein [Homo sapiens] 233 8e-62
gi|239740670 PREDICTED: hypothetical protein [Homo sapiens] 233 8e-62
gi|239513936 PREDICTED: hypothetical protein [Homo sapiens] 233 8e-62
gi|239754209 PREDICTED: hypothetical protein [Homo sapiens] 112 2e-25
gi|239748740 PREDICTED: hypothetical protein [Homo sapiens] 112 2e-25
gi|145309315 G protein-coupled receptor 62 [Homo sapiens] 30 1.3
gi|156546992 zinc finger protein 214 [Homo sapiens] 29 1.7
gi|34878699 paired box protein 2 isoform a [Homo sapiens] 29 2.2
gi|34878703 paired box protein 2 isoform e [Homo sapiens] 29 2.2
gi|239743666 PREDICTED: hypothetical protein XP_002342940 isofor... 28 4.8
gi|239743664 PREDICTED: hypothetical protein XP_002342939 isofor... 28 4.8
gi|31542319 epsilon subunit of coatomer protein complex isoform ... 28 4.8
gi|40805825 epsilon subunit of coatomer protein complex isoform ... 28 4.8
gi|223941798 N-glycanase 1 isoform 2 [Homo sapiens] 27 8.3
gi|21314690 N-glycanase 1 isoform 1 [Homo sapiens] 27 8.3
gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens] 27 8.3
gi|223941803 N-glycanase 1 isoform 3 [Homo sapiens] 27 8.3
>gi|239740894 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 344 bits (883), Expect = 2e-95
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL 60
MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL
Sbjct: 1 MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL 60
Query: 61 LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL 120
LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL
Sbjct: 61 LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL 120
Query: 121 RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 121 RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
>gi|239740771 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 344 bits (883), Expect = 2e-95
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL 60
MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL
Sbjct: 1 MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL 60
Query: 61 LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL 120
LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL
Sbjct: 61 LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL 120
Query: 121 RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 121 RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
>gi|239740643 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 344 bits (883), Expect = 2e-95
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL 60
MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL
Sbjct: 1 MGSGDPASWRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGL 60
Query: 61 LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL 120
LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL
Sbjct: 61 LFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELL 120
Query: 121 RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 121 RDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
>gi|239754265 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239748803 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239742840 PREDICTED: hypothetical protein XP_002342659 [Homo
sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239740823 PREDICTED: hypothetical protein XP_002344065 [Homo
sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239740720 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239740670 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239513936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 233 bits (593), Expect = 8e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 53 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 112
DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP
Sbjct: 3 DGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPVEEGLP 62
Query: 113 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 168
AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS
Sbjct: 63 AEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVGVVSFRVRKQIS 118
>gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 112 bits (279), Expect = 2e-25
Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Query: 52 SDGGSALGLLFGLLTEILLLFCG-GILVLLILRDEVVHVALSLGELHLVHALACVPVEEG 110
+D GS L+ LL L LF G G+LVLL+L +VVHVAL LGELHLVHALA VPV+EG
Sbjct: 6 ADRGS---LVLALLLLELPLFVGRGVLVLLVLGHQVVHVALGLGELHLVHALARVPVQEG 62
Query: 111 LPAEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVG 157
L EHG ELL DALE+LLDG A+A+EG HL+A DV G L +VG
Sbjct: 63 LAPEHGRELLGDALEQLLDGRAVADEGGRHLQAAGRDVAHGRLHVVG 109
>gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 112 bits (279), Expect = 2e-25
Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Query: 52 SDGGSALGLLFGLLTEILLLFCG-GILVLLILRDEVVHVALSLGELHLVHALACVPVEEG 110
+D GS L+ LL L LF G G+LVLL+L +VVHVAL LGELHLVHALA VPV+EG
Sbjct: 6 ADRGS---LVLALLLLELPLFVGRGVLVLLVLGHQVVHVALGLGELHLVHALARVPVQEG 62
Query: 111 LPAEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDGCLDIVG 157
L EHG ELL DALE+LLDG A+A+EG HL+A DV G L +VG
Sbjct: 63 LAPEHGRELLGDALEQLLDGRAVADEGGRHLQAAGRDVAHGRLHVVG 109
>gi|145309315 G protein-coupled receptor 62 [Homo sapiens]
Length = 368
Score = 29.6 bits (65), Expect = 1.3
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 52 SDGGSALGLLFGLLTEILLLFCGGILVLLILRDEVVHVALSLGELHLVHALACVPV 107
S+ +LGL+ + E+ L G L++++LR + AL L L +V LA +
Sbjct: 10 SEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPGLRDALYLAHLCVVDLLAAASI 65
>gi|156546992 zinc finger protein 214 [Homo sapiens]
Length = 606
Score = 29.3 bits (64), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 95 ELHLVHALACVPVEEGLPAEHG----SELLRDALEELLDGC 131
E L+ + +PVEE LP G +LLRD++EE GC
Sbjct: 181 EQKLIVQHSYIPVEEALPQYVGVICQEDLLRDSMEEKYCGC 221
>gi|34878699 paired box protein 2 isoform a [Homo sapiens]
Length = 416
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 110 GLPAEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDG 151
G+P +G + RD +E D I G HL T DV++G
Sbjct: 192 GIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEG 233
>gi|34878703 paired box protein 2 isoform e [Homo sapiens]
Length = 431
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 110 GLPAEHGSELLRDALEELLDGCAIANEGDCHLEATRWDVTDG 151
G+P +G + RD +E D I G HL T DV++G
Sbjct: 192 GIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEG 233
>gi|239743666 PREDICTED: hypothetical protein XP_002342940 isoform 2
[Homo sapiens]
Length = 465
Score = 27.7 bits (60), Expect = 4.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 5 DPAS-WRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGLLFG 63
DP+ W L SI G+G K + + R L + KE+ ++ TS GG + LF
Sbjct: 357 DPSGGWATLLESIRQAGGIGKAKLRSMKE--RKLEKQQQKEQEQVRATSQGGHLMSDLFN 414
Query: 64 LL 65
L
Sbjct: 415 KL 416
>gi|239743664 PREDICTED: hypothetical protein XP_002342939 isoform 1
[Homo sapiens]
Length = 482
Score = 27.7 bits (60), Expect = 4.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 5 DPAS-WRFLRGSINWTNGMGTRKKYRVTQNGRNLGFPEWKERGDIQQTSDGGSALGLLFG 63
DP+ W L SI G+G K + + R L + KE+ ++ TS GG + LF
Sbjct: 374 DPSGGWATLLESIRQAGGIGKAKLRSMKE--RKLEKQQQKEQEQVRATSQGGHLMSDLFN 431
Query: 64 LL 65
L
Sbjct: 432 KL 433
>gi|31542319 epsilon subunit of coatomer protein complex isoform a
[Homo sapiens]
Length = 308
Score = 27.7 bits (60), Expect = 4.8
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
Query: 116 GSELLRDA---LEELLDGCA-----IANEGDCHLEATRWDVTDGCL 153
G E L+DA +E+ D C+ + + CH+ RW+ +G L
Sbjct: 194 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
>gi|40805825 epsilon subunit of coatomer protein complex isoform b
[Homo sapiens]
Length = 257
Score = 27.7 bits (60), Expect = 4.8
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
Query: 116 GSELLRDA---LEELLDGCA-----IANEGDCHLEATRWDVTDGCL 153
G E L+DA +E+ D C+ + + CH+ RW+ +G L
Sbjct: 143 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLL 188
>gi|223941798 N-glycanase 1 isoform 2 [Homo sapiens]
Length = 636
Score = 26.9 bits (58), Expect = 8.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 78 VLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELLRDALEELLDGCAIANEG 137
+L +L+ + HV + ALAC+PV+E L + +L R +L G I++E
Sbjct: 171 ILEVLQSNIQHVLVYENPALQEKALACIPVQE-LKRKSQEKLSR--ARKLDKGINISDED 227
Query: 138 DCHLEATRW 146
LE W
Sbjct: 228 FLLLELLHW 236
>gi|21314690 N-glycanase 1 isoform 1 [Homo sapiens]
Length = 654
Score = 26.9 bits (58), Expect = 8.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 78 VLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELLRDALEELLDGCAIANEG 137
+L +L+ + HV + ALAC+PV+E L + +L R +L G I++E
Sbjct: 171 ILEVLQSNIQHVLVYENPALQEKALACIPVQE-LKRKSQEKLSR--ARKLDKGINISDED 227
Query: 138 DCHLEATRW 146
LE W
Sbjct: 228 FLLLELLHW 236
>gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]
Length = 558
Score = 26.9 bits (58), Expect = 8.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 78 VLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELLRDALEELLDGCAIANEG 137
+L +L+ + HV + ALAC+PV+E L + +L R +L G I++E
Sbjct: 171 ILEVLQSNIQHVLVYENPALQEKALACIPVQE-LKRKSQEKLSR--ARKLDKGINISDED 227
Query: 138 DCHLEATRW 146
LE W
Sbjct: 228 FLLLELLHW 236
>gi|223941803 N-glycanase 1 isoform 3 [Homo sapiens]
Length = 612
Score = 26.9 bits (58), Expect = 8.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 78 VLLILRDEVVHVALSLGELHLVHALACVPVEEGLPAEHGSELLRDALEELLDGCAIANEG 137
+L +L+ + HV + ALAC+PV+E L + +L R +L G I++E
Sbjct: 129 ILEVLQSNIQHVLVYENPALQEKALACIPVQE-LKRKSQEKLSR--ARKLDKGINISDED 185
Query: 138 DCHLEATRW 146
LE W
Sbjct: 186 FLLLELLHW 194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.142 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,917,100
Number of Sequences: 37866
Number of extensions: 306797
Number of successful extensions: 676
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 660
Number of HSP's gapped (non-prelim): 24
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.